Development of Non-Invasive Continuous Glucose Prediction Models Using Multi-Modal Wearable Sensors in Free-Living Conditions
Abstract
:1. Introduction
- We developed continuous glucose prediction models using data that can be easily acquired with wearables in free-living conditions and investigated the effectiveness of various ML techniques.
- We systematically examined the feature importance and identified the feature categories that contribute most to model performance.
- We benchmarked our models against the state-of-the-art performance (SOAP) and demonstrated the superiority of our models.
2. Materials and Methods
2.1. Dataset
2.2. Preprocessing
- (1)
- Dataset preparationAs the first step, glucose values (mg/dL) recorded from the Dexcom G6 and signals recorded from the Empatica E4 were loaded from the dataset, along with their corresponding timestamps. Samples with missing timestamps were removed, and in cases of duplicate timestamps, only the first occurrence was retained. The tri-axial accelerometer data consisted of acceleration for x, y, and z axes. These values were used to compute the vector magnitude of acceleration (ACC) to represent the overall intensity of movement.
- (2)
- Outlier removal and filteringThis step was tailored to the characteristics of each signal. First, the BVP, EDA, and ACC signals were filtered in the frequency domain following established practices in the literature. The BVP signals were filtered using a fourth-order bandpass filter with a frequency range of 0.5–5 Hz. This frequency band helps remove motion artifacts, baseline wander, and noise due to environmental factors or sensor interferences, such as muscle or electrical noise [43]. For ACC signals, we employed a lowpass filter with a cutoff of 10 Hz to filter out noises introduced by mechanical vibrations, electrical interference, and environmental conditions [44]. The EDA signals were filtered using a low-pass filter, with the cutoff frequency set to 0.5 Hz, as the skin conductance signal is limited to this frequency [45,46]. Next, for each signal, only data within physiologically plausible ranges (HR: 25–240 bpm; sTemp: 30–40 °C; BVP: −500 to 500 (a.u.); EDA: 0.01 to 100 μS; ACC: 0 to 68 ) were retained; other values were deemed invalid and replaced with NaN.
- (3)
- Segmentation into epochsThe signals were synchronized and segmented into epochs using the timestamps from the Dexcom G6 and the Empatica E4. First, the epoch size for each signal was determined using the sampling frequency and the epoch duration. Subsequently, the signals were segmented into epochs and synchronized with the available glucose timestamps. As a result, each epoch represented the 5-minute window preceding a glucose reading. The number of data points in each epoch depended on the sampling rate of the signals. For example, HR data sampled at 1 Hz consisted of 300 data points per epoch, whereas EDA data sampled at 4 Hz consisted of 1200 data points and ACC data sampled at 32 Hz consisted of 9600 data points per epoch, respectively. Epochs with more than 50% missing values in at least one signal were discarded.
- (4)
- Missing value imputationIn the final step, missing values for each signal were imputed based on the epoch-wise distribution. If the distribution was approximately normal (defined as abs(skewness) < 0.5), the mean was used for imputation; otherwise, the median was used.
2.3. Feature Engineering
2.3.1. Feature Construction
- (1)
- Physiological featuresPhysiological features were included to capture changes in autonomic nervous system activity that can be both a response to and a trigger for glucose fluctuations. Physiological features were further divided into the following subcategories: (a) data-driven features, (b) HRV features, and (c) EDA tonic and phasic features.
- (a)
- Data-driven metricsThe data-driven features included time, frequency, and non-linear domain features obtained from physiological signals.Time and frequency domain features are extensively used in biomedical signal processing to capture temporal trends and spectral characteristics of physiological signals [8]. On the other hand, non-linear features have been used in the literature to quantify complexity, irregularity, and deterministic patterns which cannot be adequately captured by solely relying on traditional time- and frequency-domain features [47]. Non-linear features can provide complementary information about underlying signal dynamics and improve model predictions by capturing subtle variations linked to physiological changes and transitions that precede or accompany changes in glucose levels. We constructed non-linear features including recurrence quantification analysis (RQA) features, entropy-based features, fractal features, and complexity-based features using EntropyHub, pyEntrp, Nolds, ordpy, and PyRQA libraries [48,49,50].We constructed 31 time-domain, 14 frequency-domain, and 42 non-linear features (a total of 87 data-driven features) for each of the HR and sTemp signals. Details of these features can be accessed at [51].
- (b)
- HRV metricsFollowing common practice in HRV signal analysis [43], we derived 13 HRV features from the preprocessed BVP signals to capture variations in heart rate and autonomic nervous system activity, such as RMSSD, SDSD, and pNN20.
- (c)
- EDA metricsThe EDA signal is composed of a slow-varying tonic component related to the baseline level of skin conductance and a fast-varying phasic component related to sudden changes in skin conductance in response to stimuli. Following common practice in EDA signal analysis [46], we derived 42 features related to tonic and phasic components of the EDA signal, such as tonic_mean, tonic_std, tonic_energy, phasic_mean, phasic_std, and phasic energy.
- (2)
- Behavioral featuresBehavioral features reflect the effects of lifestyle factors, particularly physical activity and eating, on glucose regulation through modulating insulin sensitivity and glucose uptake. Activity metrics related to the preceding 2-h window for each epoch were derived from the ACC data. Three behavioral features—ACC_2h_min, ACC_2h_max, and ACC_2h_mean—were computed.
- (3)
- Circadian featuresCircadian features represent the influence of circadian rhythm on glucose metabolism, accounting for time-of-day variations in insulin sensitivity and glucose levels. Three circadian features were derived from the timestamps. The first feature, “minutes from midnight”, indicates the time of day. Subsequently, we applied sine and cosine transformations to this feature to account for the cyclical nature of the circadian rhythm.
- (4)
- Demographic featuresDemographic features help account for inter-personal variability in baseline glucose dynamics. The biological sex was used to derive demographic features. One-hot encoding was applied to convert this categorical data into binary. Specifically, ‘male’ was mapped to ‘1’ and ‘female’ was mapped to ‘0’.
2.3.2. Feature Selection
2.4. Model Training and Validation
2.5. Model Testing
3. Results
3.1. Prediction Accuracy
3.1.1. Performance Metrics
3.1.2. Level of Agreement
3.2. Clinical Accuracy
3.3. SHAP Explanations
4. Discussion
4.1. Feature Importance
4.2. Model Performance
4.3. Comparison with Prior Work
4.4. Clinical Applicability
4.5. Limitations
4.6. Future Work
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Item | Categories | Value |
---|---|---|
Number of subjects | 16 | |
Age range | 35–65 years | |
Gender | Male | 7 (43.75%) |
Female | 9 (56.25%) | |
HbA1c | 5.7 ± 0.3 | |
Glucose Metrics 1 | Average glucose | 115 mg/dL |
Time in range (TIR) 2 | 97.87% | |
Time above range (TAR) 3 | 1.57% | |
Time below range (TBR) 4 | 0.56% | |
No. of epochs 1 | 26,380 |
Model Name | R-Squared | RMSE (mg/dL) | NRMSE (mg/dL) | MARD (%) |
---|---|---|---|---|
LR | 0.13 ± 0.01 | 21.3 ± 0.3 | 0.93 ± 0.00 | 13.7 ± 0.1 |
RR | 0.13 ± 0.01 | 21.3 ± 0.3 | 0.93 ± 0.00 | 13.7 ± 0.1 |
RFR | 0.53 ± 0.01 | 15.6 ± 0.3 | 0.68 ± 0.01 | 9.7 ± 0.1 |
XR | 0.73 ± 0.01 | 11.9 ± 0.3 | 0.52 ± 0.01 | 7.1 ± 0.1 |
Model Name | Zone A (%) | Zone B (%) | Zone C (%) | Zone D (%) | Zone E (%) | Zones (A + B) (%) |
---|---|---|---|---|---|---|
LR | 77.0 | 22.2 | 0.0 | 0.8 | 0.0 | 99.2 |
RR | 77.0 | 22.2 | 0.0 | 0.8 | 0.0 | 99.2 |
RFR | 89.1 | 10.3 | 0.0 | 0.6 | 0.0 | 99.4 |
XR | 94.2 | 5.2 | 0.0 | 0.6 | 0.0 | 99.4 |
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Karunarathna, T.S.; Liang, Z. Development of Non-Invasive Continuous Glucose Prediction Models Using Multi-Modal Wearable Sensors in Free-Living Conditions. Sensors 2025, 25, 3207. https://doi.org/10.3390/s25103207
Karunarathna TS, Liang Z. Development of Non-Invasive Continuous Glucose Prediction Models Using Multi-Modal Wearable Sensors in Free-Living Conditions. Sensors. 2025; 25(10):3207. https://doi.org/10.3390/s25103207
Chicago/Turabian StyleKarunarathna, Thilini S., and Zilu Liang. 2025. "Development of Non-Invasive Continuous Glucose Prediction Models Using Multi-Modal Wearable Sensors in Free-Living Conditions" Sensors 25, no. 10: 3207. https://doi.org/10.3390/s25103207
APA StyleKarunarathna, T. S., & Liang, Z. (2025). Development of Non-Invasive Continuous Glucose Prediction Models Using Multi-Modal Wearable Sensors in Free-Living Conditions. Sensors, 25(10), 3207. https://doi.org/10.3390/s25103207