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Considering the effects that the COVID-19 pandemic had and still has on human psychological health, it is expected that it might also affect household dogs’ and cats’ welfare. The current study explores the behavioral changes in dogs and cats before (BL) and during the lockdown (DL), as reported by their owners in China. Besides demographic parameters, variables related to the daily management of dogs and cats were analyzed in relation to behavioral problems, stress-related behaviors, and anxiety-related behaviors before and during the lockdown. A total of 261 questionnaires were collected. In general, behavioral problems and stress-related behaviors in dogs (p < 0.001) and cats (p < 0.001) decreased DL compared to BL, while anxiety-related behaviors in cats did not show any differences between the two periods considered. On the other hand, anxiety-related behaviors were more frequent in dogs DL (36.3%) compared to BL (35%), which were associated with reduced frequency of play activities with the owners (p = 0.016) and altered sleeping habits (p < 0.01). During the lockdown, dogs’ and cats’ daily routines and management (feeding and sleeping habits, dogs’ walks, dogs’ and cats’ play activities, litter box management, and cats’ lifestyle) experienced changes, but they were not associated with any behavioral issues. On the other hand, the behavioral issues considered for dogs and cats were more frequent BL, which were influenced by the daily management of the pets. The current study showed how critical the attention the owners can provide to the pets could be, to improve their companion animals’ welfare. Therefore, it is important to provide pet owners with behavioral management support both during particularly difficult periods such as a lockdown and during regular daily routines. Full article