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Keywords = colour fundus retinal image analysis

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17 pages, 4965 KB  
Article
Expanding the Genetic Spectrum in IMPG1 and IMPG2 Retinopathy
by Saoud Al-Khuzaei, Ahmed K. Shalaby, Jing Yu, Morag Shanks, Penny Clouston, Robert E. MacLaren, Stephanie Halford, Samantha R. De Silva and Susan M. Downes
Genes 2025, 16(12), 1474; https://doi.org/10.3390/genes16121474 - 9 Dec 2025
Viewed by 375
Abstract
Background: Pathogenic variants in interphotoreceptor matrix proteoglycan 1 (IMPG1) have been associated with autosomal dominant and recessive retinitis pigmentosa (RP) and autosomal dominant adult vitelliform macular dystrophy (AVMD). Monoallelic pathogenic variants in IMPG2 have been linked to maculopathy and biallelic variants [...] Read more.
Background: Pathogenic variants in interphotoreceptor matrix proteoglycan 1 (IMPG1) have been associated with autosomal dominant and recessive retinitis pigmentosa (RP) and autosomal dominant adult vitelliform macular dystrophy (AVMD). Monoallelic pathogenic variants in IMPG2 have been linked to maculopathy and biallelic variants to RP with early onset macular atrophy. Herein we characterise the phenotypic and genotypic features of patients with IMPG1/IMPG2 retinopathy and report novel variants. Methods: Patients with IMPG1 and IMPG2 variants and compatible phenotypes were retrospectively identified. Clinical data were obtained from reviewing the medical records. Phenotypic data included visual acuity, imaging included ultra-widefield pseudo-colour, fundus autofluorescence, and optical coherence tomography (OCT). Genetic testing was performed using next generation sequencing (NGS). Variant pathogenicity was investigated using in silico analysis (SIFT, PolyPhen-2, mutation taster, SpliceAI). The evolutionary conservation of novel missense variants was also investigated. Results: A total of 13 unrelated patients were identified: 2 (1 male; 1 female) with IMPG1 retinopathy and 11 (7 male; 4 female) with IMPG2 retinopathy. Both IMPG1 retinopathy patients were monoallelic: one patient had adult vitelliform macular dystrophy (AVMD) with drusenoid changes while the other had pattern dystrophy (PD), and they presented to clinic at age 81 and 72 years, respectively. There were 5 monoallelic IMPG2 retinopathy patients with a maculopathy phenotype, of whom 1 had PD and 4 had AVMD. The mean age of symptom onset of this group was 54.2 ± 11.8 years, mean age at presentation was 54.8 ± 11.5 years, and mean BCVAs were 0.15 ± 0.12 logMAR OD and −0.01 ± 0.12 logMAR OS. Six biallelic IMPG2 patients had RP with maculopathy, where the mean age of onset symptom onset was 18.4 years, mean age at examination was 68.7 years, and mean BCVAs were 1.90 logMAR OD and 1.82 logMAR OS. Variants in IMPG1 included one missense and one exon deletion. A total of 11 different IMPG2 variants were identified (4 missense, 7 truncating). A splicing defect was predicted for the c.871C>A p.(Arg291Ser) missense IMPG2 variant. One IMPG1 and five IMPG2 variants were novel. Conclusions: This study describes the phenotypic spectrum of IMPG1/IMPG2 retinopathy and six novel variants are reported. The phenotypes of PD and AVMD in monoallelic IMPG2 patients may result from haploinsufficiency, supported by the presence of truncating variants in both monoallelic and biallelic cases. The identification of novel variants expands the known genetic landscape of IMPG1 and IMPG2 retinopathies. These findings contribute to diagnostic accuracy, informed patient counselling regarding inheritance pattern, and may help guide recruitment for future therapeutic interventions. Full article
(This article belongs to the Section Human Genomics and Genetic Diseases)
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15 pages, 1093 KB  
Article
AI-Based Retinal Image Analysis for the Detection of Choroidal Neovascular Age-Related Macular Degeneration (AMD) and Its Association with Brain Health
by Chuying Shi, Jack Lee, Di Shi, Gechun Wang, Fei Yuan, Timothy Y. Y. Lai, Jingwen Liu, Yijie Lu, Dongcheng Liu, Bo Qin and Benny Chung-Ying Zee
Brain Sci. 2025, 15(11), 1249; https://doi.org/10.3390/brainsci15111249 - 20 Nov 2025
Viewed by 601
Abstract
Purpose: This study aims to develop a method for detecting referable (intermediate and advanced) age-related macular degeneration (AMD) and neovascular AMD, as well as providing an automatic segmentation of choroidal neovascularisation (CNV) on colour fundus retinal images. We also demonstrated that brain [...] Read more.
Purpose: This study aims to develop a method for detecting referable (intermediate and advanced) age-related macular degeneration (AMD) and neovascular AMD, as well as providing an automatic segmentation of choroidal neovascularisation (CNV) on colour fundus retinal images. We also demonstrated that brain health risk scores estimated by AI-based Retinal Image Analysis (ARIA), such as white matter hyperintensities and depression, are significantly associated with AMD and neovascular AMD. Methods: A primary dataset of 1480 retinal images was collected from Zhongshan Hospital of Fudan University for training and 10-fold cross-validation. Additionally, two validation subdataset comprising 238 images (retinal images and wide-field images) were used. Using fluorescein angiography-based labels, we applied the InceptionResNetV2 deep network with the ARIA method to detect AMD, and a transfer ResNet50_Unet was used to segment CNV. The risks of cerebral white matter hyperintensities and depression were estimated using an AI-based Retinal Image Analysis approach. Results: In a 10-fold cross-validation, we achieved sensitivities of 97.4% and 98.1%, specificities of 96.8% and 96.1%, and accuracies of 97.0% and 96.4% in detecting referable AMD and neovascular AMD, respectively. In the external validation, we achieved accuracies of 92.9% and 93.7% and AUCs of 0.967 and 0.967, respectively. The performances on two validation sub-datasets show no statistically significant difference in detecting referable AMD (p = 0.704) and neovascular AMD (p = 0.213). In the segmentation of CNV, we achieved a global accuracy of 93.03%, a mean accuracy of 91.83%, a mean intersection over union (IoU) of 68.7%, a weighted IoU of 89.63%, and a mean boundary F1 (BF) of 67.77%. Conclusions: The proposed method shows promising results as a highly efficient and cost-effective screening tool for detecting neovascular and referable AMD on both retinal and wide-field images, and providing critical insights into CNV. Its implementation could be particularly valuable in resource-limited settings, enabling timely referrals, enhancing patient care, and supporting decision-making across AMD classifications. In addition, we demonstrated that AMD and neovascular AMD are significantly associated with increased risks of WMH and depression. Full article
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14 pages, 3084 KB  
Article
Automatic Detection and Distinction of Retinal Vessel Bifurcations and Crossings in Colour Fundus Photography
by Harry Pratt, Bryan M. Williams, Jae Yee Ku, Charles Vas, Emma McCann, Baidaa Al-Bander, Yitian Zhao, Frans Coenen and Yalin Zheng
J. Imaging 2018, 4(1), 4; https://doi.org/10.3390/jimaging4010004 - 22 Dec 2017
Cited by 25 | Viewed by 8077
Abstract
The analysis of retinal blood vessels present in fundus images, and the addressing of problems such as blood clot location, is important to undertake accurate and appropriate treatment of the vessels. Such tasks are hampered by the challenge of accurately tracing back problems [...] Read more.
The analysis of retinal blood vessels present in fundus images, and the addressing of problems such as blood clot location, is important to undertake accurate and appropriate treatment of the vessels. Such tasks are hampered by the challenge of accurately tracing back problems along vessels to their source. This is due to the unresolved issue of distinguishing automatically between vessel bifurcations and vessel crossings in colour fundus photographs. In this paper, we present a new technique for addressing this problem using a convolutional neural network approach to firstly locate vessel bifurcations and crossings and then to classifying them as either bifurcations or crossings. Our method achieves high accuracies for junction detection and classification on the DRIVE dataset and we show further validation on an unseen dataset from which no data has been used for training. Combined with work in automated segmentation, this method has the potential to facilitate: reconstruction of vessel topography, classification of veins and arteries and automated localisation of blood clots and other disease symptoms leading to improved management of eye disease. Full article
(This article belongs to the Special Issue Selected Papers from “MIUA 2017”)
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