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Keywords = Mycocentrospora acerina

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15 pages, 3742 KiB  
Article
Development of Simple Sequence Repeat Markers and Genetic Diversity Evaluation of Mycocentrospora acerina in Yunnan Province, China
by Huiling Wang, Kuan Yang, Hongping Huang, Liwei Guo and Xiahong He
J. Fungi 2023, 9(9), 944; https://doi.org/10.3390/jof9090944 - 19 Sep 2023
Viewed by 1515
Abstract
Round spot is a destructive disease that limits of Panax notoginseng production in China. However, the genetic diversity of its etiological agent Mycocentrospora acerina has yet to be studied. In this work, firstly, we developed 32 M. acerina polymorphic microsatellite markers using MISA [...] Read more.
Round spot is a destructive disease that limits of Panax notoginseng production in China. However, the genetic diversity of its etiological agent Mycocentrospora acerina has yet to be studied. In this work, firstly, we developed 32 M. acerina polymorphic microsatellite markers using MISA and CERVUS 3.0 and selected 14 for further analysis. Then, we studied the genetic diversity of 187 isolates collected from P. notoginseng round spot using simple sequence repeat markers and polyacrylamide gel electrophoresis. The genetic diversity ranged from 0.813 to 0.946, with 264 alleles detected at the 14 microsatellite loci. The expected average heterozygosity was 0.897. Full article
(This article belongs to the Special Issue Diversity and Molecular Systematics of Plant Endophytic Fungi)
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11 pages, 2215 KiB  
Article
Development of Loop-Mediated Isothermal Amplification (LAMP) Assay for Specific and Sensitive Detection of Mycocentrospora acerina (Hart.) Causing Round Leaf Spot Disease in Sanqi (Panax notoginseng)
by Chengzhong Lan, Lin Gan, Yuli Dai, Xiaofei Liu and Xiujuan Yang
Horticulturae 2022, 8(11), 1060; https://doi.org/10.3390/horticulturae8111060 - 11 Nov 2022
Cited by 4 | Viewed by 1989
Abstract
Round leaf spot, caused by Mycocentrospora acerina, is one of the most destructive diseases in Sanqi (Panax notoginseng) plantations in China. Accurate and timely detection of M. acerina is critical for developing effective integrated disease management strategies. Therefore, we developed [...] Read more.
Round leaf spot, caused by Mycocentrospora acerina, is one of the most destructive diseases in Sanqi (Panax notoginseng) plantations in China. Accurate and timely detection of M. acerina is critical for developing effective integrated disease management strategies. Therefore, we developed a loop-mediated isothermal amplification (LAMP) assay for detection of M. acerina with primers targeting the internal transcribed spacer (ITS) region of nuclear ribosomal DNA (nrDNA). The LAMP reaction products were visually assessed using SYBR Green I and agarose gel electrophoresis. The ideal reaction temperature and time of LAMP assay were optimized to 64.5 °C and 45 min, respectively. The specificity of the developed LAMP assay was validated using 78 isolates belonging to 26 species, including M. acerina, Mycocentrospora species, and other plant pathogens. The LAMP assay was highly specific for M. acerina. Positive reactions were obtained only with the genomic DNA of M. acerina, and no cross-reaction was obtained with DNA extracted from other species. The detection limit of the LAMP assay for M. acerina was 10 fg genomic DNA per 25-μL reaction mixture. The LAMP assay successfully detected M. acerina in both symptomatic and latently infected leaf samples. The results indicate that the LAMP assay has the potential to be an efficient, highly specific, and sensitive method for diagnosing P. notoginseng round leaf spot disease caused by M. acerina in both the symptomatic and latent stages in the field and might be useful for disease management. Full article
(This article belongs to the Special Issue Horticultural Plants Pathology and Advances in Disease Management)
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