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Keywords = FPALM

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17 pages, 3748 KiB  
Article
Super-Resolution Imaging Reveals the Nanoscale Distributions of Dystroglycan and Integrin Itga7 in Zebrafish Muscle Fibers
by Komala Shivanna, Mary Astumian, Prakash Raut, Vinh-Nhan Ngo, Samuel T. Hess and Clarissa Henry
Biomedicines 2023, 11(7), 1941; https://doi.org/10.3390/biomedicines11071941 - 8 Jul 2023
Viewed by 2114
Abstract
Cell signaling is determined partially by the localization and abundance of proteins. Dystroglycan and integrin are both transmembrane receptors that connect the cytoskeleton inside muscle cells to the extracellular matrix outside muscle cells, maintaining proper adhesion and function of muscle. The position and [...] Read more.
Cell signaling is determined partially by the localization and abundance of proteins. Dystroglycan and integrin are both transmembrane receptors that connect the cytoskeleton inside muscle cells to the extracellular matrix outside muscle cells, maintaining proper adhesion and function of muscle. The position and abundance of Dystroglycan relative to integrins is thought to be important for muscle adhesion and function. The subcellular localization and quantification of these receptor proteins can be determined at the nanometer scale by FPALM super-resolution microscopy. We used FPALM to determine localizations of Dystroglycan and integrin proteins in muscle fibers of intact zebrafish (Danio rerio). Results were consistent with confocal imaging data, but illuminate further details at the nanoscale and show the feasibility of using FPALM to quantify interactions of two proteins in a whole organism. Full article
(This article belongs to the Special Issue Zebrafish Models for Development and Disease 4.0)
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13 pages, 1365 KiB  
Article
Effects of Polyacrylamide, Biochar, and Palm Fiber on Soil Erosion at the Early Stage of Vegetation Concrete Slope Construction
by Lu Xia, Bingqin Zhao, Ting Luo, Yakun Xu, Shiwei Guo, Wennian Xu and Dong Xia
Sustainability 2023, 15(7), 5744; https://doi.org/10.3390/su15075744 - 25 Mar 2023
Cited by 8 | Viewed by 2408
Abstract
The goal of this research is to investigate strategies to increase the erosion resistance of the slope surface during the early stages of vegetation concrete construction, as well as to offer a scientific foundation for improving vegetation concrete formulation. Simulated rainfall experiments were [...] Read more.
The goal of this research is to investigate strategies to increase the erosion resistance of the slope surface during the early stages of vegetation concrete construction, as well as to offer a scientific foundation for improving vegetation concrete formulation. Simulated rainfall experiments were carried out at 2 different slope gradients (50° and 60°), 2 different rainfall intensities (60 and 120 mm·h−1), and 4 treatments (CK-no additive, 0.4% P-polyacrylamide, 4% C-biochar, and 0.4% F-palm fiber). PAM, palm fiber, and biochar significantly reduced the initial runoff time of the vegetation concrete slope by an average of 47.03%, 46.41%, and 22.67%, respectively (p < 0.05). The runoff rate of each slope under different conditions increased with the expansion of rainfall duration and then fluctuated and stabilized, whereas the erosion rate decreased and then fluctuated and stabilized. PAM and palm fiber both increased runoff rates while decreasing erosion rates, but biochar increased both runoff rates and erosion rates. The runoff reduction benefits of PAM, palm fiber, and biochar were −69.84~−1.97%, −68.82~−14.28% and −63.70~−6.80%, respectively, while the sediment reduction benefits were 69.21~94.07%, −96.81~−50.35%, and 36.20~60.47%, respectively. PAM and palm fiber both have obvious sediment reduction benefits and can be used in the ecological restoration of high and steep slopes in areas with heavy rainfall. Full article
(This article belongs to the Section Soil Conservation and Sustainability)
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25 pages, 6799 KiB  
Article
Dynamics and Patterning of 5-Hydroxytryptamine 2 Subtype Receptors in JC Polyomavirus Entry
by Kashif Mehmood, Michael P. Wilczek, Jeanne K. DuShane, Matthew T. Parent, Colleen L. Mayberry, Jaqulin N. Wallace, Francois L. Levasseur, Tristan M. Fong, Samuel T. Hess and Melissa S. Maginnis
Viruses 2022, 14(12), 2597; https://doi.org/10.3390/v14122597 - 22 Nov 2022
Cited by 4 | Viewed by 2621
Abstract
The organization and dynamics of plasma membrane receptors are a critical link in virus-receptor interactions, which finetune signaling efficiency and determine cellular responses during infection. Characterizing the mechanisms responsible for the active rearrangement and clustering of receptors may aid in developing novel strategies [...] Read more.
The organization and dynamics of plasma membrane receptors are a critical link in virus-receptor interactions, which finetune signaling efficiency and determine cellular responses during infection. Characterizing the mechanisms responsible for the active rearrangement and clustering of receptors may aid in developing novel strategies for the therapeutic treatment of viruses. Virus-receptor interactions are poorly understood at the nanoscale, yet they present an attractive target for the design of drugs and for the illumination of viral infection and pathogenesis. This study utilizes super-resolution microscopy and related techniques, which surpass traditional microscopy resolution limitations, to provide both a spatial and temporal assessment of the interactions of human JC polyomavirus (JCPyV) with 5-hydroxytrypamine 2 receptors (5-HT2Rs) subtypes during viral entry. JCPyV causes asymptomatic kidney infection in the majority of the population and can cause fatal brain disease, and progressive multifocal leukoencephalopathy (PML), in immunocompromised individuals. Using Fluorescence Photoactivation Localization Microscopy (FPALM), the colocalization of JCPyV with 5-HT2 receptor subtypes (5-HT2A, 5-HT2B, and 5-HT2C) during viral attachment and viral entry was analyzed. JCPyV was found to significantly enhance the clustering of 5-HT2 receptors during entry. Cluster analysis of infected cells reveals changes in 5-HT2 receptor cluster attributes, and radial distribution function (RDF) analyses suggest a significant increase in the aggregation of JCPyV particles colocalized with 5-HT2 receptor clusters in JCPyV-infected samples. These findings provide novel insights into receptor patterning during viral entry and highlight improved technologies for the future development of therapies for JCPyV infection as well as therapies for diseases involving 5-HT2 receptors. Full article
(This article belongs to the Section Human Virology and Viral Diseases)
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23 pages, 4581 KiB  
Article
Phosphatidylinositol 4,5-Bisphosphate Mediates the Co-Distribution of Influenza A Hemagglutinin and Matrix Protein M1 at the Plasma Membrane
by Prakash Raut, Bright Obeng, Hang Waters, Joshua Zimmerberg, Julie A. Gosse and Samuel T. Hess
Viruses 2022, 14(11), 2509; https://doi.org/10.3390/v14112509 - 12 Nov 2022
Cited by 9 | Viewed by 2860
Abstract
The fully assembled influenza A virus (IAV) has on its surface the highest density of a single membrane protein found in nature—the glycoprotein hemagglutinin (HA) that mediates viral binding, entry, and assembly. HA clusters at the plasma membrane of infected cells, and the [...] Read more.
The fully assembled influenza A virus (IAV) has on its surface the highest density of a single membrane protein found in nature—the glycoprotein hemagglutinin (HA) that mediates viral binding, entry, and assembly. HA clusters at the plasma membrane of infected cells, and the HA density (number of molecules per unit area) of these clusters correlates with the infectivity of the virus. Dense HA clusters are considered to mark the assembly site and ultimately lead to the budding of infectious IAV. The mechanism of spontaneous HA clustering, which occurs with or without other viral components, has not been elucidated. Using super-resolution fluorescence photoactivation localization microscopy (FPALM), we have previously shown that these HA clusters are interdependent on phosphatidylinositol 4,5-biphosphate (PIP2). Here, we show that the IAV matrix protein M1 co-clusters with PIP2, visualized using the pleckstrin homology domain. We find that cetylpyridinium chloride (CPC), which is a positively charged quaternary ammonium compound known for its antibacterial and antiviral properties at millimolar concentrations, disrupts M1 clustering and M1-PIP2 co-clustering at micromolar concentrations well below the critical micelle concentration (CMC). CPC also disrupts the co-clustering of M1 with HA at the plasma membrane, suggesting the role of host cell PIP2 clusters as scaffolds for gathering and concentrating M1 and HA to achieve their unusually high cluster densities in the IAV envelope. Full article
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1 pages, 157 KiB  
Abstract
Characterization of JC Polyomavirus Entry by Serotonin Receptors
by Melissa Maginnis, Colleen L. Mayberry, Kashif Mehmood, Matthew Parent and Samuel Hess
Proceedings 2020, 50(1), 73; https://doi.org/10.3390/proceedings2020050073 - 17 Jun 2020
Viewed by 1288
Abstract
JC polyomavirus (JCPyV) causes a lifelong persistent infection in the kidney in the majority of the population. In severely immunocompromised individuals, JCPyV can become reactivated, spread in the central nervous system, and infect glial cells, astrocytes, and oligodendrocytes which are necessary for myelin [...] Read more.
JC polyomavirus (JCPyV) causes a lifelong persistent infection in the kidney in the majority of the population. In severely immunocompromised individuals, JCPyV can become reactivated, spread in the central nervous system, and infect glial cells, astrocytes, and oligodendrocytes which are necessary for myelin production. The viral infection and cytolytic destruction of glial cells leads to the development of the fatal demyelinating disease progressive multifocal leukoencephalopathy (PML), for which there are currently no approved treatment options. In order to develop effective antiviral therapies, it is essential to define the virus–host cell interactions that drive infection and the virus–receptor interactions that are major regulators of tissue tropism and viral disease outcomes. Following attachment to sialic acid receptors, JCPyV requires the serotonin 5-hydroxytryptamine (5-HT2) receptors to mediate internalization. However, the mechanism by which JCPyV utilizes 5-HT2 receptors to invade host cells is poorly understood. Using super-resolution fluorescence photoactivation localization microscopy (FPALM), we have determined that JCPyV localizes with 5-HT2 receptors at timepoints consistent with viral entry. Furthermore, we have determined that the 5-HT2 receptor-associated scaffolding proteins beta-arrestin, adaptor protein complex 2 (AP2) and dynamin are required for viral internalization through a clathrin-mediated endocytosis pathway. Additionally, we have identified a beta-arrestin-binding motif in the intracellular loop of the 5-HT2A receptor that is critical for JCPyV entry and infection. These findings highlight the importance of viral receptors in regulating viral infection and illuminate potential targets for antiviral treatment. Full article
(This article belongs to the Proceedings of Viruses 2020—Novel Concepts in Virology)
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