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Keywords = ERI_FL

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15 pages, 7185 KB  
Article
Flood-Landscape Ecological Risk Assessment under the Background of Urbanization
by Yu Yuan, Guohua Fang, Min Yan, Chunming Sui, Ziyu Ding and Chengxuan Lu
Water 2019, 11(7), 1418; https://doi.org/10.3390/w11071418 - 10 Jul 2019
Cited by 20 | Viewed by 3768
Abstract
The Hydrologic Modeling System (HEC-HMS) and statistical analysis method were used to analyze the relationship between flood eigenvalues (i.e., flood volume and peak flow) and landscape pattern metrics. Then, the flood-landscape ecological risk index (ERI_FL) was proposed and constructed to quantitatively assess the [...] Read more.
The Hydrologic Modeling System (HEC-HMS) and statistical analysis method were used to analyze the relationship between flood eigenvalues (i.e., flood volume and peak flow) and landscape pattern metrics. Then, the flood-landscape ecological risk index (ERI_FL) was proposed and constructed to quantitatively assess the flood-landscape ecological risk (FLER). The semivariogram method was used to spatialize the ERI_FL values. Lastly, this study analyzed the spatial–temporal change of FLER at watershed scale and at sub-basin scale, respectively. Two historical landscape distributions (i.e., 2003 and 2017) of Qinhuai River basin were used to perform this study. The results showed that there were certain relationships between landscape pattern and flood eigenvalues, and for different landscapes, the response metrics and degrees were different. FLER increased as urbanization increased. FLER change magnitude had a positive relationship with urban land percentage change magnitude. The distribution of FLER and the distribution of FLER change both showed spatial differences at watershed scale. The structural features of landscape pattern had significant effects on regional floods. In the urbanization process, avoiding forming large-scale landscape patches, improving landscape abundance, and increasing contact area between different types of landscape patches were helpful to reduce the negative effects caused by the increase of urban landscape area on flood. Full article
(This article belongs to the Section Hydrology)
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16 pages, 1484 KB  
Article
Identification of a 4-Deoxy-l-erythro-5-hexoseulose Uronic Acid Reductase, FlRed, in an Alginolytic Bacterium Flavobacterium sp. Strain UMI-01
by Akira Inoue, Ryuji Nishiyama, Shogo Mochizuki and Takao Ojima
Mar. Drugs 2015, 13(1), 493-508; https://doi.org/10.3390/md13010493 - 16 Jan 2015
Cited by 24 | Viewed by 8025
Abstract
In alginate-assimilating bacteria, alginate is depolymerized to unsaturated monosaccharide by the actions of endolytic and exolytic alginate lyases (EC 4.2.2.3 and EC 4.2.2.11). The monosaccharide is non-enzymatically converted to 4-deoxy-l-ery thro-5-hexoseulose uronic acid (DEH), then reduced to 2-keto-3-deoxy-d-gluconate (KDG) by a specific reductase, [...] Read more.
In alginate-assimilating bacteria, alginate is depolymerized to unsaturated monosaccharide by the actions of endolytic and exolytic alginate lyases (EC 4.2.2.3 and EC 4.2.2.11). The monosaccharide is non-enzymatically converted to 4-deoxy-l-ery thro-5-hexoseulose uronic acid (DEH), then reduced to 2-keto-3-deoxy-d-gluconate (KDG) by a specific reductase, and metabolized through the Entner–Doudoroff pathway. Recently, the NADPH-dependent reductase A1-R that belongs to short-chain dehydrogenases/reductases (SDR) superfamily was identified as the DEH-reductase in Sphingomonas sp. A1. We have subsequently noticed that an SDR-like enzyme gene, flred, occurred in the genome of an alginolytic bacterium Flavobacterium sp. strain UMI-01. In the present study, we report on the deduced amino-acid sequence of flred and DEH-reducing activity of recombinant FlRed. The deduced amino-acid sequence of flred comprised 254 residues and showed 34% amino-acid identities to that of A1-R from Sphingomonas sp. A1 and 80%–88% to those of SDR-like enzymes from several alginolytic bacteria. Common sequence motifs of SDR-superfamily enzymes, e.g., the catalytic tetrad Asn-Lys-Tyr-Ser and the cofactor-binding sequence Thr-Gly-x-x-x-Gly-x-Gly in Rossmann fold, were completely conserved in FlRed. On the other hand, an Arg residue that determined the NADPH-specificity of Sphingomonas A1-R was replaced by Glu in FlRed. Thus, we investigated cofactor-preference of FlRed using a recombinant enzyme. As a result, the recombinant FlRed (recFlRed) was found to show high specificity to NADH. recFlRed exhibited practically no activity toward variety of aldehyde, ketone, keto ester, keto acid and aldose substrates except for DEH. On the basis of these results, we conclude that FlRed is the NADH-dependent DEH-specific SDR of Flavobacterium sp. strain UMI-01. Full article
(This article belongs to the Special Issue Green Chemistry Approach to Marine Products)
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