Search Results (8)

The response of the desert cyanobacterium Chroococcidiopsis sp. CCMEE 010 was tested in Mars simulations to investigate the possibility of photosynthesis in near-surface protected niches. This cyanobacterium colonizes lithic niches enriched in far-red light (FRL) and depleted in visible light (VL) and is capable of far-red light photoacclimation (FaRLiP). Biofilms were grown under FRL and VL and exposed in a hydrated state to a low-pressure atmosphere, variable humidity, and UV irradiation, as occur on the Martian surface. VL biofilms showed a maximum quantum efficiency that dropped after 1 h, whereas a slow reduction occurred in FRL biofilms up to undetectable after 8 h, indicating that UV irradiation was the primary cause of photoinhibition. Post-exposure analyses showed that VL and FRL biofilms were dehydrated, suggesting that they entered a dried, dormant state and that top-layer cells shielded bottom-layer cells from UV radiation. After Mars simulations, the survivors (12% in VL biofilms and few cells in FRL biofilms) suggested that, during the evolution of Mars habitability, near-surface niches could have been colonized by phototrophs utilizing low-energy light. The biofilm UV resistance suggests that, during the loss of surface habitability on Mars, microbial life-forms might have survived surface conditions by taking refuge in near-surface protected niches. Full article

Mesophilic microbial sources of prokaryotic Argonaute (pAgo) programmable nucleases have garnered considerable attention for their potential applications in genome editing and molecular diagnostics. In this study, we characterized a novel pAgo from the mesophilic bacterium Chroococcidiopsis sp. (ChAgo), which can cleave single-stranded DNA (ssDNA) using both 5′-phosphorylated guide DNA (5′P-gDNA) and 5′-hydroxylated guide DNA (5′OH-gDNA). Efficient cleavage occurs using 14–25 nt 5′P-gDNA and 13–20 nt 5′OH-gDNA in the presence of Mn²⁺ ions at temperatures ranging from 25 to 75 °C, with optimal activity at 55 °C. ChAgo demonstrates low tolerance for single-base mismatches, similar to other pAgo proteins. The cleavage efficiency varies based on the guide/target pair, with mismatches at specific positions significantly reducing activity. For instance, mismatches at positions 4, 5, or 12 in T-gDNA/target pairs and at positions 5 or 8–10 in g38NT-gDNA/target pairs notably decrease efficiency. ChAgo’s sensitivity to mismatches makes it a promising tool for nucleic acid manipulation and detection, requiring initial screening for high cleavage efficiency sites and subsequent identification of mismatch positions. Full article

Drug overuse harms the biosphere, leading to disturbances in ecosystems’ functioning. Consequently, more and more actions are being taken to minimise the harmful impact of xenopharmaceuticals on the environment. One of the innovative solutions is using biosorbents—natural materials such as cells or biopolymers—to remove environmental pollutants; however, this focuses mainly on the removal of metal ions and colourants. Therefore, this study investigated the biosorption ability of selected pharmaceuticals—paracetamol, diclofenac, and ibuprofen—by the biomass of the cyanobacteria Anabaena sp. and Chroococcidiopsis thermalis, using the LC-MS/MS technique. The viability of the cyanobacteria was assessed by determining photosynthetic pigments in cells using a UV–VIS spectrophotometer. The results indicate that both tested species can be effective biosorbents for paracetamol and diclofenac. At the same time, the tested compounds did not have a toxic effect on the tested cyanobacterial species and, in some cases, stimulated their cell growth. Furthermore, the Anabaena sp. can effectively biotransform DCF into its dimer. Full article

Desert strains of the genus Chroococcidiopsis are among the most desiccation-resistant cyanobacteria capable of anhydrobiosis. The accumulation of two sugars, sucrose and trehalose, facilitates the entrance of anhydrobiotes into a reversible state of dormancy by stabilizing cellular components upon water removal. This study aimed to evaluate, at the atomistic level, the role of trehalose in desiccation resistance by using as a model system the 30S ribosomal subunit of the desert cyanobacterium Chroococcidiopsis sp. 029. Molecular dynamic simulations provided atomistic evidence regarding its protective role on the 30S molecular structure. Trehalose forms an enveloping shell around the ribosomal subunit and stabilizes the structures through a network of direct interactions. The simulation confirmed that trehalose actively interacts with the 30S ribosomal subunit and that, by replacing water molecules, it ensures ribosomal structural integrity during desiccation, thus enabling protein synthesis to be carried out upon rehydration. Full article

Epiphytic subaerial algae represent an assemblage of micro-organisms widely distributed in terrestrial environments, including urban environments. Urban habitats present many challenges for the survival of photosynthetic micro-organisms, yet many species of subaerial microalgae have been reported from these environments, demonstrating a high tolerance to the harsh conditions of urban environments. In this study, the epiphytic subaerial communities of five parks in the urban area of Bangkok were studied using a metabarcoding approach (sequencing of the 23S rDNA marker), with the goal of unraveling their diversity and assessing potential bioindicators with levels of air pollution. Diversity indexes were determined for the algal taxa detected, which were separated into groups corresponding to different collection sites by cluster analysis. Relationships between taxa and air pollutants were analyzed by PCA and the Pearson correlation coefficient (r). The results showed a high diversity of epiphytic subaerial algae. We recorded 101 taxa belonging to the Cyanophyta (70 taxa), Chlorophyta (21 taxa), Charophyta (5 taxa), Bacillariophyta (3 taxa), and Eustigmatophyta (2 taxa). The most abundant taxon was Chroococcidiopsis sp. 1, for which up to 13,254 sequences/cm² were recorded. The Shannon–Weaver index ranged between 1.37 and 2.51, the Margalef index between 3.84 and 4.75, and the Pielou index between 0.30 and 0.54. The similarity index was between 8.00% and 64.82%, according to the cluster analysis results for the three groups. The PCA indicated that all air pollutants affected the diversity and abundance of epiphytic subaerial algae. Cyanothece sp. 2 was negatively related to O₃ and positively related to NO₂ and CO and is suggested as a potential bioindicator of air pollution. Full article

Show caves have different grades of colonization by phototrophic biofilms. They may receive a varied number of visits, from a few thousand to hundreds of thousands of visitors annually. Among them, Tesoro Cave, Rincon de la Victoria, Spain, showed severe anthropic alterations, including artificial lighting. The most noticeable effect of the lighting was the growth of a dense phototrophic community of cyanobacteria, algae and bryophytes on the speleothems, walls and ground. The biofilms were dominated by the cyanobacterium Phormidium sp., the chlorophyte Myrmecia israelensis, and the rhodophyte Cyanidium sp. In many cases, the biofilms also showed an abundance of the bryophyte Eucladium verticillatum. Other cyanobacteria observed in different biofilms along the cave were: Chroococcidiopsis sp., Synechocystis sp. and Nostoc cf. edaphicum, the green microalgae Pseudococcomyxa simplex, Chlorella sp. and the diatom Diadesmis contenta. Preliminary cleaning tests on selected areas showed the effectiveness of hydrogen peroxide and sodium hypochlorite. A physicochemical treatment involving the mechanical removal of the thickest layers of biofilms was followed by chemical treatments. In total, 94% of the surface was cleaned with hydrogen peroxide, with a subsequent treatment with sodium hypochlorite in only 1% of cases. The remaining 5% was cleaned with sodium hypochlorite in areas where the biofilms were entrapped into a calcite layer and in sandy surfaces with little physical compaction. The green biofilms from the entire cave were successfully cleaned. Full article

Unicellular cyanobacteria inhabit a wide range of ecosytems and can be found throughout the phylum offering space for taxonomic confusion. One example is strain PCC 6712 that was described as Chlorogloea sp. (Nostocales) and later assigned to the genus Chroococcidiopsis (Chroococcidiopsidales). We now show that this strain belongs to the order Pleurocapsales and term it Hyella disjuncta based on morphology, genome analyses and 16S-23S ITS rRNA phylogeny. Genomic analysis indicated that H. disjuncta PCC 6712 shared about 44.7% orthologue genes with its closest relative H. patelloides. Furthermore, 12 cryptic biosynthetic gene clusters (BGCs) with potential bioactivity, such as a mycosporine-like amino acid BGC, were detected. Interestingly, the full set of nitrogen fixation genes was found in H. disjuncta PCC 6712 despite its inability to grow on nitrogen-free medium. A comparison of genes responsible for multicellularity was performed, indicating that most of these genes were present and related to those found in other cyanobacterial orders. This is in contrast to the formation of pseudofilaments—a main feature of the genus Hyella—which is weakly expressed in H. disjuncta PCC 6712 but prominent in Hyella patelloides LEGE 07179. Thus, our study pinpoints crucial but hidden aspects of polyphasic cyanobacterial taxonomy. Full article

Carotenoids are promising targets in our quest to search for life on Mars due to their biogenic origin and easy detection by Raman spectroscopy, especially with a 532 nm excitation thanks to resonance effects. Ionizing radiations reaching the surface and subsurface of Mars are however detrimental for the long-term preservation of biomolecules. We show here that desiccation can protect carotenoid Raman signatures in the desert cyanobacterium Chroococcidiopsis sp. CCMEE 029 even after high-dose gamma irradiation. Indeed, while the height of the carotenoids Raman peaks was considerably reduced in hydrated cells exposed to gamma irradiation, it remained stable in dried cells irradiated with the highest tested dose of 113 kGy of gamma rays, losing only 15-20% of its non-irradiated intensity. Interestingly, even though the carotenoid Raman signal of hydrated cells lost 90% of its non-irradiated intensity, it was still detectable after exposure to 113 kGy of gamma rays. These results add insights into the preservation potential and detectability limit of carotenoid-like molecules on Mars over a prolonged period of time and are crucial in supporting future missions carrying Raman spectrometers to Mars’ surface. Full article