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Authors = Songyun Zhao ORCID = 0000-0003-0542-1085

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18 pages, 5350 KiB  
Article
A Bioinformatics-Based Analysis of an Anoikis-Related Gene Signature Predicts the Prognosis of Patients with Low-Grade Gliomas
by Songyun Zhao, Hao Chi, Wei Ji, Qisheng He, Guichuan Lai, Gaoge Peng, Xiaoyu Zhao and Chao Cheng
Brain Sci. 2022, 12(10), 1349; https://doi.org/10.3390/brainsci12101349 - 5 Oct 2022
Cited by 40 | Viewed by 3988
Abstract
Low-grade glioma (LGG) is a highly aggressive disease in the skull. On the other hand, anoikis, a specific form of cell death induced by the loss of cell contact with the extracellular matrix, plays a key role in cancer metastasis. In this study, [...] Read more.
Low-grade glioma (LGG) is a highly aggressive disease in the skull. On the other hand, anoikis, a specific form of cell death induced by the loss of cell contact with the extracellular matrix, plays a key role in cancer metastasis. In this study, anoikis-related genes (ANRGs) were used to identify LGG subtypes and to construct a prognostic model for LGG patients. In addition, we explored the immune microenvironment and enrichment pathways between different subtypes. We constructed an anoikis-related gene signature using the TCGA (The Cancer Genome Atlas) cohort and investigated the differences between different risk groups in clinical features, mutational landscape, immune cell infiltration (ICI), etc. Kaplan–Meier analysis showed that the characteristics of ANRGs in the high-risk group were associated with poor prognosis in LGG patients. The risk score was identified as an independent prognostic factor. The high-risk group had higher ICI, tumor mutation load (TMB), immune checkpoint gene expression, and therapeutic response to immune checkpoint blockers (ICB). Functional analysis showed that these high-risk and low-risk groups had different immune statuses and drug sensitivity. Risk scores were used together with LGG clinicopathological features to construct a nomogram, and Decision Curve Analysis (DCA) showed that the model could enable patients to benefit from clinical treatment strategies. Full article
(This article belongs to the Section Molecular and Cellular Neuroscience)
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16 pages, 6625 KiB  
Article
Intra-Peritoneal Administration of Mitochondrial DNA Provokes Acute Lung Injury and Systemic Inflammation via Toll-Like Receptor 9
by Lemeng Zhang, Songyun Deng, Shuangping Zhao, Yuhang Ai, Lina Zhang, Pinhua Pan, Xiaoli Su, Hongyi Tan and Dongdong Wu
Int. J. Mol. Sci. 2016, 17(9), 1425; https://doi.org/10.3390/ijms17091425 - 30 Aug 2016
Cited by 58 | Viewed by 8798
Abstract
The pathogenesis of sepsis is complex. Mitochondrial dysfunction, which is responsible for energy metabolism, intrinsic apoptotic pathway, oxidative stress, and systemic inflammatory responses, is closely related with severe sepsis induced death. Mitochondria DNA (mtDNA) contain un-methylated cytosine phosphate guanine (CpG) motifs, which exhibit [...] Read more.
The pathogenesis of sepsis is complex. Mitochondrial dysfunction, which is responsible for energy metabolism, intrinsic apoptotic pathway, oxidative stress, and systemic inflammatory responses, is closely related with severe sepsis induced death. Mitochondria DNA (mtDNA) contain un-methylated cytosine phosphate guanine (CpG) motifs, which exhibit immune stimulatory capacities. The aim of this study was to investigate the role and mechanism of mtDNA release on lipopolysaccharide (LPS) induced acute lung injury (ALI) and systemic inflammation. Following LPS injection, plasma mtDNA copies peak at 8 h. Compared with wild-type (WT) mice, mtDNA in toll like receptor 4 knockout (TLR4 KO) mice were significantly decreased. MtDNA intra-peritoneal administration causes apparent ALI as demonstrated by increased lung injury score, bronchoalveolar lavage fluid (BALF) total protein and wet/dry (W/D) ratio; mtDNA injection also directly provokes systemic inflammation, as demonstrated by increased IL-1β, IL-6, high-mobility group protein B1 (HMGB1) level; while nuclear DNA (nDNA) could not induce apparent ALI and systemic inflammation. However, compared with WT mice, TLR4 KO could not protect from mtDNA induced ALI and systemic inflammation. Specific TLR9 inhibitor, ODN 2088 pretreatment can significantly attenuate mtDNA induced ALI and systemic inflammation, as demonstrated by improved lung injury score, decreased lung wet/dry ratio, BALF total protein concentration, and decreased systemic level of IL-1β, IL-6 and HMGB1. MtDNA administration activates the expression of p-P38 mitogen-activated protein kinases (MAPK) in lung tissue and specific TLR9 inhibitor pretreatment can attenuate this activation. Thus, LPS-induced mtDNA release occurs in a TLR4-dependent manner, and mtDNA causes acute lung injury and systemic inflammation in a TLR9-dependent and TLR4-independent manner. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
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7 pages, 51 KiB  
Article
A Fiber-Optic Electrochemilunescence Sensor Placed into Sample Solution
by Changzhi Zhao, Songyun Xu, Zhaohong Ding, Guoliang Zhao and Naoyoshi Egashira
Sensors 2001, 1(4), 114-120; https://doi.org/10.3390/s10400114 - 21 Sep 2001
Cited by 2 | Viewed by 9706
Abstract
A novel fiber-optic electrochemiluninescence sensor has been developed. It can be conveniently applied by placing into the sample solution in a manner similar to a conventional ion selective electrode, without requiring liquid luminous reagent and a flowing system. The sensor is consisted of [...] Read more.
A novel fiber-optic electrochemiluninescence sensor has been developed. It can be conveniently applied by placing into the sample solution in a manner similar to a conventional ion selective electrode, without requiring liquid luminous reagent and a flowing system. The sensor is consisted of an independent probe and a case for exclusion the ambient light, allowing the sample solution to pass through. Within the body of the probe, an optical fiber is utilized to collect and transmit light signal. In the three electrode configuration of the probe, a Pt electrode coated with Ru(bpy)32+- modified chitosan/silica gel membrane is used to give the electrolytic potential and provide a selective luminous membrane. The linear responses of the sensor to oxalic acid and amino acid were obtained in the concentration range of 2.0 × 10-4 to 1.0 × 10 –2 mol/dm3 with the relative standard deviations of 3.5% and 5.7%, respectively. The response of the sensor was not less than 80% of the initial value after the service time was over one month. Full article
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