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Authors = Nabeel Saif

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8 pages, 837 KiB  
Communication
Dental Loop Chatbot: A Prototype Large Language Model Framework for Dentistry
by Md Sahadul Hasan Arian, Faisal Ahmed Sifat, Saif Ahmed, Nabeel Mohammed, Taseef Hasan Farook and James Dudley
Software 2024, 3(4), 587-594; https://doi.org/10.3390/software3040029 - 17 Dec 2024
Viewed by 2372
Abstract
The Dental Loop Chatbot was developed as a real-time, evidence-based guidance system for dental practitioners using a fine-tuned large language model (LLM) and Retrieval-Augmented Generation (RAG). This paper outlines the development and preliminary evaluation of the chatbot as a scalable clinical decision-support tool [...] Read more.
The Dental Loop Chatbot was developed as a real-time, evidence-based guidance system for dental practitioners using a fine-tuned large language model (LLM) and Retrieval-Augmented Generation (RAG). This paper outlines the development and preliminary evaluation of the chatbot as a scalable clinical decision-support tool designed for resource-limited settings. The system’s architecture incorporates Quantized Low-Rank Adaptation (QLoRA) for efficient fine-tuning, while dynamic retrieval mechanisms ensure contextually accurate and relevant responses. This prototype lays the groundwork for future triaging and diagnostic support systems tailored specifically to the field of dentistry. Full article
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15 pages, 3261 KiB  
Article
One-Stage Methods of Computer Vision Object Detection to Classify Carious Lesions from Smartphone Imaging
by S. M. Siamus Salahin, M. D. Shefat Ullaa, Saif Ahmed, Nabeel Mohammed, Taseef Hasan Farook and James Dudley
Oral 2023, 3(2), 176-190; https://doi.org/10.3390/oral3020016 - 4 Apr 2023
Cited by 14 | Viewed by 3656
Abstract
The current study aimed to implement and validate an automation system to detect carious lesions from smartphone images using different one-stage deep learning techniques. 233 images of carious lesions were captured using a smartphone camera system at 1432 × 1375 pixels, then classified [...] Read more.
The current study aimed to implement and validate an automation system to detect carious lesions from smartphone images using different one-stage deep learning techniques. 233 images of carious lesions were captured using a smartphone camera system at 1432 × 1375 pixels, then classified and screened according to a visual caries classification index. Following data augmentation, the YOLO v5 model for object detection was used. After training the model with 1452 images at 640 × 588 pixel resolution, which included the ones that were created via image augmentation, a discrimination experiment was performed. Diagnostic indicators such as true positive, true negative, false positive, false negative, and mean average precision were used to analyze object detection performance and segmentation of systems. YOLO v5X and YOLO v5M models achieved superior performance over the other models on the same dataset. YOLO v5X’s mAP was 0.727, precision was 0.731, and recall was 0.729, which was higher than other models of YOLO v5, which generated 64% accuracy, with YOLO v5M producing slightly inferior results. Overall mAPs of 0.70, precision of 0.712, and recall of 0.708 were achieved. Object detection through the current YOLO models was able to successfully extract and classify regions of carious lesions from smartphone photographs of in vitro tooth specimens with reasonable accuracy. YOLO v5M was better fit to detect carious microcavitations while YOLO v5X was able to detect carious changes without cavitation. No single model was capable of adequately diagnosing all classifications of carious lesions. Full article
(This article belongs to the Topic Digital Dentistry)
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13 pages, 1761 KiB  
Article
Visual Diagnostics of Dental Caries through Deep Learning of Non-Standardised Photographs Using a Hybrid YOLO Ensemble and Transfer Learning Model
by Abu Tareq, Mohammad Imtiaz Faisal, Md. Shahidul Islam, Nafisa Shamim Rafa, Tashin Chowdhury, Saif Ahmed, Taseef Hasan Farook, Nabeel Mohammed and James Dudley
Int. J. Environ. Res. Public Health 2023, 20(7), 5351; https://doi.org/10.3390/ijerph20075351 - 31 Mar 2023
Cited by 21 | Viewed by 6372
Abstract
Background: Access to oral healthcare is not uniform globally, particularly in rural areas with limited resources, which limits the potential of automated diagnostics and advanced tele-dentistry applications. The use of digital caries detection and progression monitoring through photographic communication, is influenced by multiple [...] Read more.
Background: Access to oral healthcare is not uniform globally, particularly in rural areas with limited resources, which limits the potential of automated diagnostics and advanced tele-dentistry applications. The use of digital caries detection and progression monitoring through photographic communication, is influenced by multiple variables that are difficult to standardize in such settings. The objective of this study was to develop a novel and cost-effective virtual computer vision AI system to predict dental cavitations from non-standardised photographs with reasonable clinical accuracy. Methods: A set of 1703 augmented images was obtained from 233 de-identified teeth specimens. Images were acquired using a consumer smartphone, without any standardised apparatus applied. The study utilised state-of-the-art ensemble modeling, test-time augmentation, and transfer learning processes. The “you only look once” algorithm (YOLO) derivatives, v5s, v5m, v5l, and v5x, were independently evaluated, and an ensemble of the best results was augmented, and transfer learned with ResNet50, ResNet101, VGG16, AlexNet, and DenseNet. The outcomes were evaluated using precision, recall, and mean average precision (mAP). Results: The YOLO model ensemble achieved a mean average precision (mAP) of 0.732, an accuracy of 0.789, and a recall of 0.701. When transferred to VGG16, the final model demonstrated a diagnostic accuracy of 86.96%, precision of 0.89, and recall of 0.88. This surpassed all other base methods of object detection from free-hand non-standardised smartphone photographs. Conclusion: A virtual computer vision AI system, blending a model ensemble, test-time augmentation, and transferred deep learning processes, was developed to predict dental cavitations from non-standardised photographs with reasonable clinical accuracy. This model can improve access to oral healthcare in rural areas with limited resources, and has the potential to aid in automated diagnostics and advanced tele-dentistry applications. Full article
(This article belongs to the Special Issue Dental Hygiene and Oral Health Research: Lessons and Challenges)
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24 pages, 985 KiB  
Perspective
Precision Nutrition for Alzheimer’s Prevention in ApoE4 Carriers
by Nicholas G. Norwitz, Nabeel Saif, Ingrid Estrada Ariza and Richard S. Isaacson
Nutrients 2021, 13(4), 1362; https://doi.org/10.3390/nu13041362 - 19 Apr 2021
Cited by 51 | Viewed by 41235
Abstract
The ApoE4 allele is the most well-studied genetic risk factor for Alzheimer’s disease, a condition that is increasing in prevalence and remains without a cure. Precision nutrition targeting metabolic pathways altered by ApoE4 provides a tool for the potential prevention of disease. However, [...] Read more.
The ApoE4 allele is the most well-studied genetic risk factor for Alzheimer’s disease, a condition that is increasing in prevalence and remains without a cure. Precision nutrition targeting metabolic pathways altered by ApoE4 provides a tool for the potential prevention of disease. However, no long-term human studies have been conducted to determine effective nutritional protocols for the prevention of Alzheimer’s disease in ApoE4 carriers. This may be because relatively little is yet known about the precise mechanisms by which the genetic variant confers an increased risk of dementia. Fortunately, recent research is beginning to shine a spotlight on these mechanisms. These new data open up the opportunity for speculation as to how carriers might ameliorate risk through lifestyle and nutrition. Herein, we review recent discoveries about how ApoE4 differentially impacts microglia and inflammatory pathways, astrocytes and lipid metabolism, pericytes and blood–brain barrier integrity, and insulin resistance and glucose metabolism. We use these data as a basis to speculate a precision nutrition approach for ApoE4 carriers, including a low-glycemic index diet with a ketogenic option, specific Mediterranean-style food choices, and a panel of seven nutritional supplements. Where possible, we integrate basic scientific mechanisms with human observational studies to create a more complete and convincing rationale for this precision nutrition approach. Until recent research discoveries can be translated into long-term human studies, a mechanism-informed practical clinical approach may be useful for clinicians and patients with ApoE4 to adopt a lifestyle and nutrition plan geared towards Alzheimer’s risk reduction. Full article
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