3.1. Rating of Abiotic Resistance of Tomato Genotypes
The studies showed an inverse relationship between the number of viable explants and the content of both NaCl and hydroxyproline in the medium, but none of the experimental concentrations werelethal. The results of analysis of variance prove the significance of the impact on this indicator of both studied factors—the composition of the environment and the genotype.
The addition of 5 g/L NaCl to the nutrient medium did not significantly reduce the proportion of viable explants compared to the control variant in any of the samples (
Figure 1a).
When the concentration of NaCl was increased to 10 g/L, the proportion of viable explants in the genotypes Dama, T-2, Potiron ecarlate and the wild species S. chilense significantly decreased. The highest concentration of NaCl studied—15 g/L—significantly reduced the viability of all studied samples. In the process of cultivation there was observed first whitening and death of the lower part of the micro-cuttings immersed in the medium, and then there was the death of the explant. Samples of Potiron ecarlate (the proportion of viable explants was 0.4) and Goldene koningin “Reine D’Or” (0.18) reacted the most strongly to the addition of NaCl. The highest viability was characterized by the sample T-5, in which the survival of explants at the maximum concentration of NaCl was at the control level and it was 0.93, which is significantly higher than the reference genotypes of S. chilense (0.62) and K-7311 (0.6).
It was found that the concentration of hydroxyproline 0.05 g/L also did not significantly affect the level of viability of microscales of most studied samples (
Figure 1a). However, there was observed a significant decrease of viable explants in the proportion in the genotypes of Zulfia F1, T-5, Potiron ecarlate, T-2. The wild species of
S. chilense reacted the most strongly to the content of hydroxyproline in the medium. The addition of 0.05 g/L of hydroxyproline resulted in a decrease in the proportion of viable explants of this sample by 43%, 0.1 g/L—by 70%, 0.15 g/L—by 81%. Seven and Goldene koningin “Reine D’Or” showed the highest viability on hydroxyproline media.
There was observed a significant difference between genotypes in terms of shoot height of regenerating plants (
Figure 1b). According to the reaction to the addition of selective substances, all tested samples can be divided into several groups. Thus, the addition of NaCl and/or hydroxyproline to the nutrient medium resulted in a decrease in the average shoot height of regenerating plants compared to controls in samples of
S. chilense, Potiron ecarlate and T-5. In samples K-7311 and Dama sobole height was also decreased but remained close to control. The relationship between the concentration of the selective agent and the height of the shoot is inversely proportional. In Goldene koningin “Reine D’Or” there was observed a similar phenomenon only on media with NaCl, while on media with hydroxyproline regenerating plants in terms of sobole height exceeded the control by 12–13%. Samples of Zulfia F1, Esmira F1, Seven and T-2 were also singled out, in which the sobole height on all studied selective media significantly exceeded the control indicators (by 12–68%).
The effect of different concentrations of NaCl and hydroxyproline in the nutrient medium was studied in relation to the development of the root system in thetest tubes. It was found that the addition of NaCl significantly reduced the percentage of rooted plants; there was found an inversely proportional relationship between the concentration of the selective agent and the frequency of rhizogenesis (
Figure 1c). In the samples of Seven, Esmir F1 and Zulfia F1 in the variant with the maximum concentration of NaCl (15 g/L) the formation of the root system did not occur at all. The maximum proportion of rooting on this medium (18.86%) was observed in sample T-5. In the variety Goldene koningin “Reine D’Or” rhizogenesis was completely stopped on a medium of 10 g/L NaCl.
It was found that the concentration of hydroxyproline 50 mg/L does not significantly affect the percentage of rooting of plants of all studied samples. Increasing the concentration of the selective agent to 100 mg/L led to a decrease in the proportion of rooted plants. In the Seven and T-2 samples, the percentage of rooted regenerants decreased compared to the control by 5–16%; in T-5 and S. chilense by 27–30%; in other samples—more than 40%. Therefore, the activity of rhizogenesis on this selective medium strongly depended on the genotypic characteristics of each sample. On medium with 150 mg/L of hydroxyproline, the root formation was markedly inhibited in samples K-7311, Zulfia F1, Esmira F1, Potiron ecarlate and Dama. S. chilense, T-2 and T-5 were the least sensitive to the effects of hydroxyproline on this indicator.
It was found that NaCl had a much stronger effect on the rhizogenesis of tomato regenerating plants than hydroxyproline. The length of the roots of regressive plants decreased proportionally with increasing concentration of both studied selective agents (
Figure 1d). On media with minimal NaCl content in samples Seven, Dama, Zulfia F1, Goldene koningin “Reine D’Or”, and in Dama—and on media with minimal hydroxyproline content, the root length was at the control level and even slightly exceeded it, which indicates a higher compared to other samples resistance of these genotypes to osmotic stress. However, a further increase in the concentration of selective substances led to a decrease in root length in these samples.
3.2. Rating of Biotic Resistance of Tomato Genotypes
For screening of tomato genotypes for disease resistance we studied the efficiency of cultivation of callus and tomato shoots on selective media with different concentrations of FCL of
Alternia spp. and
Fusarium spp. Cultivation of calluses on a nutrient medium with the addition of 30% concentration of FCL of the fungus
Alternaria spp. did not allow to clearly differentiate the samples according to the indicator “callus volume” as its impact on the object was not significant (
Figure 2a). Thus, in
S. chilense (standard) it was—0.68. At the level of the standard there were samples of Esmira F
1—0.66; Zulfia F
1—0.63, Seven—0.63, Goldene koningin—0.63, Potiron ecarlate—0.63. It was noted that the calluses were green, they had a loose texture with foci of organogenesis.
The use of 40% concentration of FCL proved to be the most effective for differentiation of samples. Calluses in this variant of the selective medium had a dark green color, dense texture and without any organogenesis. This concentration reduced the morphological parameters of the samples by 50% towards the control variant. It should be noted that a higher concentration of FCL (60%) in a selective medium, according to our previous studies, had quite a high toxic effect, which manifested itself in inhibiting the development of callus cells and regenerants and their destruction.
It is necessary to say that the 40% concentration of FCL Alternaria spp. in the nutrient medium caused a stronger inhibition of callus cell development in the standard S. chilense—0.64, Esmira F1—0.60, Zulfia F1—0.62, variety Seven—0.71. Calluses had a dark green color, dense texture, without any organogenesis.
In variants with a 30% concentration of FCL of the fungus Fusarium spp. the inhibition of callus development was also observed in all studied genotypes. The average values of the indicator “callus volume” in this variant compared with the standard varied in the range of 0.30–0.69 and was, respectively, in samples of S. chilense (standard)—0.69, Esmira F1—0.65, Zulfia F1—0.63, variety Seven—0.62. There was a slightly lower callus development in Goldene koningin and Potironecorlate—0.61 and 0.64 accordingly.
It was found that 40% concentration of FCL Fusarium spp. in the nutrient medium significantly affects the development of calluses, which allows to differentiate breeding samples by sensitivity to the selective medium. The index of the mean value of the “callus volume” was S. chilense—0.64, the hybrid Esmira F1—0.61, Zulfiya F1—0.63, Seven—0.58. Compared to other samples of the S. chilense standard, hybrids of Esmir F1 and Zulfia F1, the Seven variety showed the least sensitivity to the action of selective factor.
According to the indicator “shoot height”, the cultivation of regenerants by 30% FCL fungus
Alternaria spp. was in the standard
S. chilense—0.79, Esmira F
1—1.03, Seven—0.89 and Zulfia F
1—0.96. High shoot height was recorded in Goldene koningin and Potironecorlate varieties—0.81 and 0.85 accordingly (
Figure 2b).
On the place with the addition of 40% FCL Alternaria spp. there was observed a stronger inhibition of the development of callus-induced tomato shoots. Thus, in the studied samples, the indicator “shoot height” was as follows: in the standard S. chilense—0.66, Esmira F1—0.87, Zulfia F1—0.83, variety Seven—0.57. Exteriorly the shoots on this variant of the selective medium differed in light green color, they had signs of significant tissue necrosis, and there wasn’t observed root formation.
In variants with the addition to the nutrient medium of 30% FCL of the fungus Fusarium spp. the indicator of “height of shoot” was in S. chilense (standard)—0.76, hybrid Esmira F1—1.15, Zulfia F1—0.89, variety Seven—0.81, Goldene koningin—0.86 and Potiron ecarlate—0.89. A high level of resistance was observed in the cultivation of genotypes at 40% concentration of FCL of the fungus Fusarium spp. Thus, in the standard S. chilense—0.70, Esmira F1—0.63, varieties of Franch selection Goldene koningin and Potiron ecarlate—0.63 and 0.58 accordingly. At the standard the height of shoots in the variety Seven—0.46 and hybrid Zulfia F1—0.44.
It was found that 40% concentration of FCL Fusarium spp. and Alternaria spp. in the nutrient medium MS significantly affected the indicators of “callus volume” and “shoot height”, which allowed to differentiate the selection material of the tomato by sensitivity to the selective agent in culture in vitro.
3.3. Rating of Resistance of Tomato Genotypes to Nutrient Deficiency
In a series of experiments to assess the resistance of tomato genotypes to nutrient deficiency, we firstly confirmed the conclusion [
12] about the need to adjust the composition of the nutrient medium in accordance with the biological needs of the culture and the characteristics of the genotype.
By all indications there was observed a minimal variation in biometric parameters in the standard sample
S.chilense (
Figure 3), which confirms its stability to different growing conditions as a wild species.
S. chilense had a high development index even on the medium with the maximum nutrient deficiency in the experiment (variant
VI), while most genotypes except for the samples Potiron ecarlate and Seven had lower indices of sobole height and number of leaves. The maximum variation in the development of the aboveground part was in the sample Esmira F
1, a hybrid of intensive type, the yield of which depends on the mode of mineral nutrition. The index of sobole height of this sample varied from 0.97 on
III medium to 3.00 on
V medium. The Zulfia F
1 hybrid was stable under different feeding options, while the Potiron ecarlate variety, recommended for organic cultivation technologies, had higher root length index values at low levels of mineral nutrition on
VI medium. Samples K-7311, Zulfia F
1, Dama, T-2 had higher indices on the medium of
V sample with a high content of the mesos complex.
3.4. Determination of Peroxidase Levels in Test Plants Tubes
Tubed tomato plants are the most sensitive to adverse factors because they are actively growing and developing. Therefore, to analyze the response of plant-regenerating tomatoes to cultivation under stress after 4 weeks cultivated on selective media, we established the activity of the redox enzyme peroxidase.
It was found that peroxidase activity in tomato regenerating plants increases in comparison with the control with increasing concentration of selective agents in the nutrient, which is a normal response of the plant to stress conditions. Hydroxyproline caused a stronger increase in peroxidase activity in most samples than NaCl did. The strongest response to the addition of selective substances to the nutrient medium was to the addition of selective substances to the nutrient medium such as Esmira F
1 (
Table A1). Thus, in this sample on the medium with the maximum content of NaCl (15 g/L) the level of peroxidase activity exceeded the control variant by 8.63 times, on the medium with the maximum content of hydroxyproline (0.15 g/L)—by 11.51 times. Furthermore, there was observed a strong response to selective media on this indicator in samples Zulfia F1, Goldene koningin “Reine D’Or”, K-7311 and Seven, which indicates an active response of these samples to osmotic stress. There was observed quite a level of peroxidase activity on selective media in the standard sample
S. chilense (the maximum excess of the control variant was recorded on a medium of 0.15 g/L hydroxyproline and was 2.77 times), as well as in samples of Potiron ecarlate, T-5 and T-2.
Peroxidase activity on selective media with the addition of 30% and 40% concentration of FCR Fusarium and Alternaria also had a pronounced tendency to rise with increasing concentration of a selective agent in nutrient media. The peroxidase activity in the sample of S. chilense when cultured by 30% and 40% FCR Fusarium and Alternaria was increased from 0.76 to 0.82 and from 1.37 to 1.26 accordingly, indicating high resistance to biotic stress of this wild kind. Zulfia F1 hybrid also had high peroxidase activity—from 1.98 to 6.10, which was estimated to show the highest resistance to diseases in soil conditions. In the sample K-7311 this figure ranged from 3.57 to 5.55. It should be noted that the samples Esmira F1, Goldene koningin, Potiron ecarlate did not respond to increasing the concentration of the selective agent in the environment by increasing the level of peroxidase. Thus, in Esmira F1, Goldene koningin and Potiron ecarlate this indicator even decreased accordingly from 2.63 to 1.46, from 3.86 to 1.63, from 2.05 to 1.05, which indicates the high stability of these genotypes to biotic stress.
In studies to assess the resistance of tomato genotypes to deficiency—excess nutrients, peroxidase activity had the largest amplitude of variation on IV and VI media (0.24–2.99 and 0.58–2.70 times from control accordingly), on V and II variants its level was minimal (0.46–1.37 and 0.53–1.40 times the control, respectively), which indicates a low level of stress. Therefore, for the differentiation of tomato genotypes into groups according to the level of mineral nutrition, it is advisable to use nutrient media with a low content of KNO3 and NH4NO3 (VI variant) or with a high content of mineral salts (II variant).
3.5. Development of a Model for Assessing the Stress Tolerance of Tomato Genotypes
To develop models for assessing stress-tolerant samples suitable for cultivation at different levels of production intensity there were analyzed the indices of all 71 traits on selective media in vitro using cluster analysis functions which allowed us to establish eleven significant correlation coefficients (
Table A2) and grouped genotypes with a similar response rate to cultivation on selective media. According to the reaction of genotypes the samples were divided into two groups (
Figure 4).
The first group includes 6 samples (Solanum chilense, Potiron ecarlate, Golden konongin “Reine D’or”, Dama, T-5, T-2), which according to the field assessment are suitable for growing by organic technologies, the second 4 samples (K-7311, Seven, Zulfia F1, Esmira F1), high-yielding varieties and hybrids recommended for intensive tomato growing technologies.
Using the Goodman—Kruskal correlation coefficient [
11], which allows us to analyze the relationships between nonparametric traits, all 71 traits of tomato genotypes in culture in vitro were additionally calculated, which allowed us to establish 11 significant correlation coefficients at 5% significance.
To build models of classification functions these 11 indicators were analyzed using canonical discriminant analysis, which allowed us to calculate a system of classification equations for dividing the samples into two separate groups.
PNa10—Indicator of peroxidase activity on selective medium with the addition of Nacl 10 g/L;
PH0.05—Indicator of peroxidase activity on selective medium with the addition of hydroxyproline 0.05 g/L;
PF40—Indicator of peroxidase activity on selective medium with the addition of 40% FCL Fusarium;
RLII—The length of the root on the modified medium II.
The obtained system of discriminant equations allows the correct classification of samples into two groups (canonical correlation coefficient Canonical R = 0.96, Wilk’s Lambda criterion = 0.075 at the significance level p-level = 0.0038).