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Abstract

Molecular Taxonomy of Deep-Sea Swallowers of the Family Chiasmodontidae †

by
Jesús Portas
1,
Rafael Bañón
2,‡,
José Luis del Río
3,
David Barros-García
4 and
Alejandro de Carlos
1,*
1
Facultade de Bioloxía, Universidade de Vigo, 36310 Vigo, Spain
2
Grupo de Estudio do Medio Mariño (GEMM), 15960 Ribeira, Spain
3
Instituto Español de Oceanografía, Centro Oceanográfico de Vigo, 36390 Vigo, Spain
4
CIIMAR—Interdisciplinary Centre of Marine and Environmental Research, 4450-159 Matosinhos, Portugal
*
Author to whom correspondence should be addressed.
Presented at the IX Iberian Congress of Ichthyology, Porto, Portugal, 20–23 June 2022.
Presenting author (Poster presentation).
Biol. Life Sci. Forum 2022, 13(1), 13; https://doi.org/10.3390/blsf2022013013
Published: 2 June 2022
(This article belongs to the Proceedings of The IX Iberian Congress of Ichthyology)

Abstract

:
The taxonomy of deep-sea fishes remains a little explored and sometimes unclear subject, as is the case of the family Chiasmodontidae. In multiple fishery assessment surveys carried out between 2017 and 2021 in the Western North Atlantic, around 50 specimens of this family were caught and tentatively named onboard as Chiasmodon niger. To test this preliminary identification, based on taxonomic and geographical criteria, DNA barcodes of the 5′ end of the mitochondrial COI gene were developed for 37 specimens. In this way it was possible to observe the polymorphisms between sequences and to calculate the gene distance between each of them. GenBank and BOLD repositories were also used for presumptive identification based on the percentage of similarity between sequences. In addition, the sequences of the 37 specimens were compared with all the barcode records of the COI-5P region of chiasmodontids found in the BOLD database. From the comparison between all the sequences and the data analyses performed on them, two main conclusions were reached. The first is that all specimens captured in the Western North Atlantic area were confirmed to belong to the species Chiasmodon niger. The other conclusion that can be drawn is that the databases present major problems with regard to this family. The identification of the 37 sample specimens allowed the detection of misidentifications of some sequences extracted from the repositories, as well as possible synonymies, as is the case with Chiasmodon niger and Chiasmodon harteli. This highlights taxonomic conflicts that should be addressed as a subject for future studies.

Author Contributions

Conceptualization, R.B. and A.d.C.; methodology, R.B., J.P. and A.d.C.; formal analysis, R.B., D.B.-G. and A.d.C.; resources, R.B., J.L.d.R. and A.d.C.; data curation, J.P. and A.d.C.; writing—original draft preparation, J.P, R.B. and A.d.C.; funding acquisition, J.L.d.R. and A.d.C. All authors have read and agreed to the published version of the manuscript.

Funding

A.d.C. was funded by the GRC Program from the Xunta de Galicia, Spain, grant code ED431C 2019/28.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

DNA sequences and their corresponding metadata, such as specimen photographs, capture coordinates and dates, are part of the project “Fishes of the Family Chiasmodontidae” (code CHIAS), deposited in the Barcode of Life database (www.boldsystems.org).

Conflicts of Interest

The authors declare no conflict of interest.
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Share and Cite

MDPI and ACS Style

Portas, J.; Bañón, R.; del Río, J.L.; Barros-García, D.; de Carlos, A. Molecular Taxonomy of Deep-Sea Swallowers of the Family Chiasmodontidae. Biol. Life Sci. Forum 2022, 13, 13. https://doi.org/10.3390/blsf2022013013

AMA Style

Portas J, Bañón R, del Río JL, Barros-García D, de Carlos A. Molecular Taxonomy of Deep-Sea Swallowers of the Family Chiasmodontidae. Biology and Life Sciences Forum. 2022; 13(1):13. https://doi.org/10.3390/blsf2022013013

Chicago/Turabian Style

Portas, Jesús, Rafael Bañón, José Luis del Río, David Barros-García, and Alejandro de Carlos. 2022. "Molecular Taxonomy of Deep-Sea Swallowers of the Family Chiasmodontidae" Biology and Life Sciences Forum 13, no. 1: 13. https://doi.org/10.3390/blsf2022013013

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