Next Article in Journal
Probiotics as Therapeutic Tools against Pathogenic Biofilms: Have We Found the Perfect Weapon?
Previous Article in Journal
Eumycetoma Medical Treatment: Past, Current Practice, Latest Advances and Perspectives
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

ESBL/AmpC-Producing Enterobacteriaceae Fecal Colonization in Dogs after Elective Surgery

1
Centre for Interdisciplinary Research in Animal Health (CIISA), Faculty of Veterinary Medicine, University of Lisbon, Avenida da Universidade Técnica, 1300-477 Lisbon, Portugal
2
Faculty of Veterinary Medicine, Lusófona University, Campo Grande, 1749-024 Lisbon, Portugal
*
Author to whom correspondence should be addressed.
Microbiol. Res. 2021, 12(4), 907-915; https://doi.org/10.3390/microbiolres12040067
Submission received: 1 September 2021 / Revised: 11 November 2021 / Accepted: 22 November 2021 / Published: 24 November 2021

Abstract

:
The purpose of this study was to evaluate the presence and load of ESBL/AmpC-producing Enterobacteriaceae fecal carriage in healthy dogs. Fecal samples were collected from dogs submitted to surgical procedures (n = 25). Fecal samples were collected before surgery (BS) and after surgery (AS). β-lactamases were detected by PCR. Statistical analyses were performed with SAS software (v.9.4); a p value ≤ 0.05 was considered statistically significant. The ESBL/AmpC-producing Enterobacteriaceae bacteria species detected in this study were E. coli, K. pneumoniae and E. cloacae. TEM, and CTX-M-1 group genes were the most frequent β-lactamases detected. The number of dogs colonized with 3GC-resistant Enterobacteriaceae bacteria was significantly higher in the AS (63.6%, n = 14/22) group compared to in the BS group (20.0%, n = 5/25, p = 0.0033). The ESBL/AmpC-producing bacteria fecal load was significantly higher in the AS group compared to in the BS (p = 0.025) group. This study shows that 3GC-resistant Enterobacteriaceae and ESBLs/AmpC producers in the veterinary clinical practice are a concern and highlights the need to implement preventive measures to minimize their spread.

1. Introduction

The European Medicine Agency has reviewed the public health risks associated with the transfer of antimicrobial resistance from companion animals and has identified the major microbiological hazards coming from companion animals to humans, including third-generation cephalosporin-resistant bacteria [1]. The presence of antimicrobial-resistant bacteria in companion animals and their close contact with humans provides opportunities for interspecies transmission [1]. In veterinary hospitals, infections acquired during hospitalization caused by resistant bacteria are an increasing problem [2,3]. Antimicrobials are regularly used for the prevention and control of infections in companion animals, and many of the antimicrobials used are the same or closely related to those used in the treatment of bacterial infections in humans [4,5].
β-lactams are among the most important antimicrobials used in veterinary medicine. Extended-spectrum β-lactamases (ESBLs) are enzymes that confer resistance to most beta-lactam antibiotics, including penicillins, cephalosporins, and the monobactam aztreonam except for cephamycins and carbapenems [6]. In addition to ESBLs, Enterobacteriaceae can acquire plasmid-encoded ampC genes (pAmpC) as an important resistance mechanism against β-lactams. AmpC β-lactamases hydrolyze several β-lactam antibiotics, including cephamycins, oxyimino cephalosporins, and monobactam aztreonam [7]. ESBL/AmpC-encoding genes are located on mobile genetic elements, and many are plasmid-mediated and transferable between bacteria of different species. The first ESBLs were described in Europe in the 1980s, and since then, ESBLs have been reported worldwide as a major source of antimicrobial resistance in Gram-negative pathogens [6,8]. The most frequent ESBL producers are Escherichia coli and Klebsiella pneumoniae, which are the main source of community- and hospital-acquired infections in human and veterinary medicine [6,8,9].
Prophylactic antimicrobial use involves the administration of the antimicrobial in the absence of infection, with the aim of preventing it, for example in the perioperative period [5]. Ideally, the antimicrobial prophylaxis scheme should be selected and prescribed to minimize the possible impact on the normal bacterial flora of the patient and on the microbiologic ecology of the hospital [10]. Inappropriate prophylaxis may promote the selection of antimicrobial-resistant bacteria [5].
The gastrointestinal tract is one of the main reservoirs for the emergence and dissemination of antimicrobial-resistant bacteria. Dog feces are a recognized source of resistant bacteria that can be transmitted to humans through direct contact or through shared (domestic and public) environments [1,10,11,12,13,14,15,16]. Antimicrobial resistance to third generation cephalosporins (3GC) has been previously detected in bacteria from canine fecal samples in recent years [14,15,17,18,19,20]. However, to the best of our knowledge, this is the first study to focus on the dynamics of ESBLs/AmpC producing- Enterobacteriaceae in the intestinal tracts of healthy dogs that were admitted to perform elective surgical procedures. The purpose of this study was to evaluate the presence and load of ESBLs/AmpC-producing Enterobacteriaceae fecal carriages in healthy dogs undergoing surgery.

2. Materials and Methods

2.1. Sampling Procedure and Collection of Data

From February to July 2014, fecal samples were obtained from 25 healthy dogs (without signs of gastrointestinal disease in the previous week) that went to a veterinary teaching hospital to undergo a surgical procedure. The surgery study group was divided: (i) before surgery (BS) upon admission to the Veterinary Hospital and (ii) after the surgical procedure (AS). Animals were excluded if they had been treated with an antimicrobial agent in the previous month. The surgical procedures considered for this study were soft tissue and orthopedic surgery. Fecal samples were collected at two different time points, namely before (BS) and after surgery (AS). A total of 25 animals were included in the BS group. The follow up samples included in the AS group were collected one week after surgery. However, in three animals, the follow-up was not possible and, therefore, 22 samples were studied. The dog owners were questioned verbally, and all replied to the questions regarding: age, gender, hospitalization, and antimicrobial treatment within the last year, cohabitation with other animals, street access, shelter/hotel access, and surgery type (soft tissue, orthopedic) and surgery reason (elective surgery or non-elective). The fecal sample collection was conducted by the owners using non-invasive methods. Owners were given specific instructions about the collection method to avoid sample contamination through contact with the ground. The instructions also included the fecal collection into sterile containers and the use of gloves.

2.2. Bacteria Isolation, Identification and DNA Extraction

One gram of feces was diluted in sterile saline solution (NaCl, 0.85%-Merck—Germany). Once homogenized, 10 μL was directly cultured on MacConkey agar plates (Scharlau, Barcelona, Spain) supplemented with 2.0 μg/mL of cefotaxime (CTX) (Sigma–Aldrich, St. Louis, MO, USA) and incubated overnight at 37 °C. CTX-resistant Enterobacteriaceae bacteria were then quantified by counting the colony-forming units (CFU) per gram of feces. Positive samples were screened for the presence of different colony morphologies of CTX-resistant Enterobacteriaceae. One isolate of each unique morphology was selected from each positive sample for further study. The bacterial species were determined using an API 20E kit, the software APIWEB (BioMérieux, Marcy-l’Étoile, France) and by species-specific PCR [21,22]. DNA extraction was conducted using a boiling method [23].

2.3. Escherichia coli Phylogenetic Typing

Phylogenetic typing was performed in all E. coli isolates to determine the main phylogenetic groups (A, B1, B2 and D) according to the amplification of chuA and yjaA genes, and TspE4C2 fragment) by multiplex PCR [24].

2.4. Antimicrobial Susceptibility Testing

Antimicrobial susceptibility testing and interpretation were performed using the disk diffusion method according to Clinical and Laboratory Standards Institute (CLSI) guidelines [25]. The following antimicrobial disks (Oxoid, Basingstoke, Hampshire, UK) were used: 10 μg ampicillin (AMP), 30 μg amoxicillin-clavulanate (AMC), 30 μg cephalothin (KF), 30 μg cefotaxime (CTX), 30 μg ceftazidime (CAZ) and 30 μg cefoxitin (FOX). ESBL production was confirmed by the double-disk synergy test according to CLSI standards and isolates were classified as susceptible or resistant according to CLSI criteria [25]. The reference strain E. coli ATCC 25922 was used for quality control testing [25].

2.5. ß-Lactamase Resistance Genes

3GC-resistant Enterobacteriacea isolates were screened by PCR for the presence of blaSHV, blaOXA-1, blaTEM β-lactamase genes; blaCTX-M, blaCTX-M-1group and blaCTX-M-9group ESBLs [26,27,28] and blaMOX-1, blaMOX-2, blaCMY-1, blaCMY-8 to blaCMY-11, blaLAT-1 to blaLAT-4, blaCMY-2 to blaCMY-7, blaBIL-1, blaDHA-1 to blaDHA-2, blaACC, blaMIR-1T, blaACT-1 and blaFOX-1 to FOX-5 pAmpC encoding genes [29]. Negative and previously sequenced positive controls were included in all PCR reactions. Negative controls were PCR mixtures with the addition of water in place of template DNA.

2.6. Statistical Analysis

Statistical analysis was performed using SAS statistical software package for Windows, version 9.4 (SAS Institute, Cary, NC, USA). For the categorical variables, proportions were compared using Fisher’s exact test and General linear model (GLM) procedures were used to perform descriptive statistics of ESBL/AmpC-producing Enterobacteriaceae load. The results were considered statistically significant when p < 0.05.

3. Results

Thirty six percent (n = 9/25) of fecal samples were obtained from female dogs and 64.0% (n = 16/25) from males, with a median age of 7 years (ranging from 0.2–13 years). All the animals belonged to private owners. Previous hospitalization in last year was observed in 60.0% (n = 15/25) of the dogs and 50.0% (n = 12/24) had been treated with an antimicrobial agent within the last year. All the animals had access to the street, 68.0% (n = 17/25) and 12.0% (n = 3/25) of the dogs cohabited with other animals and had been in shelters/hotels, respectively (Table 1).
About 76.0% (n = 19/25) of the animals were submitted to soft tissues surgery and 24.0% (n = 6/25) to orthopedic surgery. Regarding prophylactic antimicrobial treatment, 92.0% (n = 23/25) of the dogs received prophylactic antimicrobial treatment through oral administration by different antimicrobials before and after surgery (Table 1). About 52.0% (n = 12/23) of the dogs and 73.9% (n = 17/23) were administered AMC, before surgery and after surgery, respectively. One dog received AMC and a second-generation cephalosporin (2GC) after surgery; three dogs received other antimicrobials (2GC, n = 1; AMC and metronidazole, n = 1; metronidazole and macrolides n = 1) in both time points.
In this study, 20.0% (n = 5/25) of the dogs were colonized with ESBL-producing Enterobacteriaceae at the time of hospital admission, four of which were E. coli and one was Klebsiella pneumoniae (Table 2). The most common antimicrobial resistance phenotype of E. coli isolates was AMPR-AMCR-KFR-CTXR-FOXR-CAZR (60.0%, n = 3/4). Two E. coli harbored the blaTEM gene (n = 2/4), one harbored the blaSHV gene (n = ¼) and one blaCTX-M-1group (n = ¼) (Table 2).
Regarding samples collected after surgery (AS), about 64.0% (n = 14/22) of dogs were colonized with 3GC-resistant Enterobacteriaceae. Around 45.0% (n = 10/22) of the fecal samples were E. coli positive, followed by K. pneumoniae (18.2%, n = 4/22) and E. cloacae (13.6%, n = 3/22). Interestingly, in one of the fecal samples (FMVS3), several ESBL producers were found, along with one E. coli isolate and three Klebsiella pneumoniae isolates with different antimicrobial phenotypes and genotypes (Table 2).
Among the E. coli isolates, the most common antimicrobial resistance phenotype was AMPR-AMCR-KFR-CTXR-FOXR-CAZR (n = 8/10), while among K. pneumonia and E. cloacae the most common was AMPR-AMCR-KFR-CTXR-CAZR (n = 2/4) and AMPR-KFR-CTXR-FOXR-CAZR (n = 3/3), respectively. Furthermore, 70.0% of the E. coli isolates (n = 7/10) harbored the blaTEM gene, and the remaining isolates harbored the blaCTX-M-1group gene (n = 1/10), blaSHV gene (n = 1/10) and one carried the combination of blaOXA-1+blaTEM genes (Table 3). Regarding K. pneumoniae, all isolates were positive for blaOXA-1+blaTEM+blaCTX-M-1group genes (Table 2). In addition to the increase in 3GC-resistant Enterobacteriaceae in fecal samples after surgery (AS), most E. coli isolates belonged to commensal phylogenetic groups (group-A, n = 4/10; group-B1, n = 3/10). Pathogenic phylogenetic groups were also detected (group-B2, n = 2/10; group-D, n = 1/10) (Table 2). However, there was no statistically significant difference between BS and AS regarding pathogenic E. coli phylogenetic groups.
In this study, the number of dogs colonized with ESBL/AmpC-producing Enterobacteriaceae was significantly higher in the AS group (63.6%, n = 14/22) than in the BS group (20.0%, n = 5/25, p = 0.0033) (Table 2). Moreover, the ESBL/AmpC-producing Enterobacteriaceae load mean after surgery was 1.74 × 106 ± 5.33 × 106 CFU/g of feces, and before surgery it was 1.10 × 102 ± 4.51 × 102 CFU/g of feces. The CTX-resistant bacteria fecal load was statistically significantly higher in the AS group than in the BS group (p = 0.025) (Table 3).

4. Discussion

In this study, about 20.0% of dogs before surgery and before entering the hospital were already colonized with ESBL/AmpC-producing Enterobacteriaceae. The results obtained here were similar to those previously published using samples from 2010–2011 from healthy dogs [16]. It is likely that this similarity is related to the fact that both studies were conducted in the same geographical area (metropolitan region of Lisbon). A significant increase in antimicrobial resistance was detected among bacteria causing UTI in companion animals from the Lisbon area between 1999 and 2014 [30]. Therefore, the apparent stable frequency of the CTX-resistant bacteria fecal carriage among heathy dogs is considered a positive outcome from this study. Nevertheless, the frequency of colonization by CTX-resistant bacteria reported here (20%) before surgery should not be neglected since the fecal carriage of ESBLs/AmpC-producing may be a risk factor for secondary infections by MDR bacteria in hospitalized patients, as also occurs in humans.
The ESBL/AmpC-producing Enterobacteriaceae detected in this study were E. coli, K. pneumoniae and E. cloacae. Enterobacter cloacae is ubiquitous in the environment, and it is commensal in the intestinal tract of humans and animals [31]. This species is also prone to contaminating various medical, intravenous, and other hospital devices contributing to skin/soft tissue infections, urinary tract, and intra-abdominal infections [32]. Furthermore, E. cloacae has an intrinsic resistance to ampicillin, amoxicillin, first-generation cephalosporins, and cefoxitin owing to the production of constitutive AmpC β-lactamase. Resistance of Enterobacter spp. to 3GC is, in most cases, caused by overproduction of AmpC β-lactamases [33,34,35].
In this study, the blaTEM and blaCTX-M-1group were the most frequent β-lactam-resistance genes, which is in agreement with previous studies [15,18,34]. Hordijk et al. [19] analyzed healthy dogs and cats without contact with the hospital environment in the Netherlands and detected a high percentage (45%) of dogs colonized with Enterobacteriaceae-producing β-lactamases (ESBL/AmpCs). Procter et al. [35] reported that 12.7% of E. coli strains isolated from dogs, who attended parks in three cities in Canada, were resistant to β-lactam antimicrobials. Aslantas and Yilmaz [36] detected 22% of dogs were colonized by CTX-resistant E. coli in Turkey. The different frequencies of β-lactam-resistant bacteria detected in these studies may be related to differences among geographical regions or to differences between study designs. Nevertheless, it highlights the importance of reporting data from different geographical regions.
In this study, ESBL-producing Enterobacteriaceae significantly increased between AS and BS, and changes in fecal microbiota occurred, which could be in part explained by the prophylactic use of amoxicillin-clavulanate. Moreover, in addition to antimicrobial administration, the administration of other medications and also the type of food have been identified as factors influencing fecal bacteria flora [37,38,39]. Furthermore, dogs food is a vehicle of ESBL and AmpC-type resistance to last-resort antimicrobials thus positioning dog food as an important source of antibiotic resistance spread [38]. Yet, in this study, these two variables were not considered in the questionnaire, as they were a limitation of the study. In future studies, it will also be important to include the type of diet and other medications, in addition to antimicrobials in order to understand the changes in the fecal flora. Another limitation of this study is the sample size; it would be interesting to increase the sample size, to enable the detection of possible risk factors in the future. Furthermore, the findings presented here regarding dog colonization by CTX-resistant bacteria are of public health and veterinary interest.
In one recent study conducted in the Netherlands using whole genome sequencing, around 43% of owned dogs were found to be persistently colonized by ESBL-producing Enterobacteriaceae (6 months) [40]. It is important to notice that van den Bunt et al. used pre-enrichment media, unlike the study presented here [37]. Therefore, the high frequency of colonized dogs by CTX-resistant bacteria detected after surgery (64.0%) could be even higher.
An important finding from this study is not only that the number of colonized dogs by CTX-resistant bacteria increased significantly with the antimicrobial treatment, but also that there was a significant increase in the detected fecal load (UFC/g), achieving a mean value of 1.74 × 106 UFC/g. These two findings together further highlight the importance of dogs in the dissemination of resistant bacteria and emphasize the need for appropriate fecal disposal during antimicrobial prophylaxis or treatment. This finding is of great importance, not only because of the direct impact on patients, but also because resistant bacteria can be transmitted from companion animals to humans and disseminated into the environment [1,12,14,15].
Future longitudinal studies should be conducted to access the evolution of the fecal CTX-resistant bacteria load over time once the antimicrobial treatment is interrupted.
ESBL/AmpC-producing Enterobacteriaceae may also spread from patient to patient due to inadequate attention to infection control measures, especially hand washing. Infections caused by Enterobacteriaceae have features that are of particular concern. These organisms are highly efficient at up-regulating or acquiring genes that code for mechanisms of antimicrobial drug resistance, especially in the presence of antimicrobial selection pressure [41].

5. Conclusions

The findings of the current research showed that about 20% of dogs before surgery and before entering in the hospital were already colonized with ESBL/AmpC-producing Enterobacteriaceae, mainly harboring the blaTEM and blaCTX-M-1group genes. After elective surgery, the number of dogs colonized with ESBL/AmpC-producing Enterobacteriaceae and the mean load of ESBL/AmpC-producing Enterobacteriaceae was significantly higher than before surgery. Furthermore, ESBL-producing Enterobacteriaceae significantly increased with antimicrobial prophylactic use, and changes in fecal microbiota occurred. European and national appropriate antimicrobial surgical prophylaxis guidelines are urgently needed for the compliance of antimicrobial stewardship principles in veterinary hospitals.

Author Contributions

Conceptualization, A.B., J.C. and C.P.; methodology, A.B. and J.C.; validation, A.B., C.M. and C.P.; formal analysis, A.B. and L.T.d.G.; investigation, A.B., C.M. and J.C.; data curation, A.B. and J.C.; writing—original draft preparation, A.B. and J.C.; writing—review and editing, A.B., C.P. and L.T.d.G.; supervision, C.P.; project administration, C.P.; funding acquisition, C.P. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by CIISA and Fundação para a Ciência e a Tecnologia through Project (UID/CVT/00276/2020), and under the grant FCT PhD SFRH/BD/113142/2015 of Adriana Belas. Part of this research is supported by COST Action CA18217—European Network for Optimization of Veterinary Antimicrobial Treatment.

Informed Consent Statement

Not applicable.

Conflicts of Interest

The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

References

  1. Pomba, C.; Rantala, M.; Greko, C.; Baptiste, K.E.; Catry, B.; van Duijkeren, E.; Mateus, A.; Moreno, M.A.; Pyörälä, S.; Ružauskas, M.; et al. Public health risk of antimicrobial resistance transfer from companion animals. J. Antimicrob. Chemother. 2017, 72, 957–968. [Google Scholar] [CrossRef]
  2. Timofte, D.; Maciuca, I.E.; Williams, N.J.; Wattret, A.; Schmidt, V. Veterinary Hospital Dissemination of CTX-M-15 Extended-Spectrum Beta-Lactamase–Producing Escherichia coli ST410 in the United Kingdom. MDR 2016, 22, 609–615. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  3. Tuerena, I.; Williams, N.J.; Nuttall, T.; Pinchbeck, G. Antimicrobial-resistant Escherichia coli in hospitalised companion animals and their hospital environment. J. Small Anim. Pract. 2016, 57, 339–347. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  4. WHO 7th Meeting Report of WHO Advisory Group on Integrated Surveillance of Antimicrobial Resistance (AGISAR). Available online: https://apps.who.int/iris/bitstream/handle/10665/272714/WHO-NMH-FOS-FZD-18.1-eng.pdf (accessed on 21 August 2021).
  5. Prescott, J.F.; Boerlin, P. Antimicrobial use in companion animals and Good Stewardship Practice. Vet. Rec. 2016, 179, 486–488. [Google Scholar] [CrossRef] [PubMed]
  6. Paterson, D.L.; Bonomo, R.A. Extended-Spectrum β-Lactamases: A Clinical Update. Clin. Microbiol. Rev. 2005, 18, 657–686. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  7. Bush, K.; Jacoby, G.A. Updated functional classification of beta-lactamases. Antimicrob. Agents Chemother. 2010, 54, 969–976. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  8. Knothe, H.; Shah, P.; Krcmery, V.; Antal, M.; Mitsuhashi, S. Transferable resistance to cefotaxime, cefoxitin, cefamandole and cefuroxime in clinical isolates of Klebsiella pneumoniae and Serratia marcescens. Infection 1983, 11, 315–317. [Google Scholar] [CrossRef] [PubMed]
  9. Martínez-Martínez, L.; Calvo, J. El problema creciente de la resistencia antibiótica en bacilos gram negativos: Situación actual. Enferm. Infecc. Microbiol. Clin. 2010, 28, 25–31. [Google Scholar] [CrossRef]
  10. Schmiedel, J.; Falgenhauer, L.; Domann, E.; Bauerfeind, R.; Prenger-Berninghoff, E.; Imirzalioglu, C.; Chakraborty, T. Multiresistant extended-spectrum β-lactamase-producing Enterobacteriaceae from humans, companion animals and horses in central Hesse, Germany. BMC Microbiol. 2014, 14, 187. [Google Scholar] [CrossRef] [Green Version]
  11. Giguère, S.; Prescott, J.F.; Dowling, P.M. Textbook of Antimicrobial Therapy in Veterinary Medicine, 5th ed.; Ames, I., Ed.; Wiley Blackwell: Hoboken, NJ, USA, 2013; ISBN 978-0-470-96302-9. [Google Scholar]
  12. Johnson, J.R.; Stell, A.L.; Delavari, P. Canine Feces as a Reservoir of Extraintestinal Pathogenic Escherichia coli. Infect. Immun. 2001, 69, 1306–1314. [Google Scholar] [CrossRef] [Green Version]
  13. Barza, M.; Travers, K. Excess Infections Due to Antimicrobial Resistance: The “Attributable Fraction”. Clin. Infect. Dis. 2002, 34, S126–S130. [Google Scholar] [CrossRef] [PubMed]
  14. Guardabassi, L. Pet animals as reservoirs of antimicrobial-resistant bacteria: Review. J. Antimicrob. Chemother. 2004, 54, 321–332. [Google Scholar] [CrossRef] [PubMed]
  15. Johnson, J.R.; Miller, S.; Johnston, B.; Clabots, C.; DebRoy, C. Sharing of Escherichia coli Sequence Type ST131 and Other Multidrug-Resistant and Urovirulent E. coli Strains among Dogs and Cats within a Household. J. Clin. Microbiol. 2009, 47, 3721–3725. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  16. Belas, A.; Salazar, A.S.; Gama, L.T.; Couto, N.; Pomba, C. Risk factors for faecal colonisation with Escherichia coli producing extended-spectrum and plasmid-mediated AmpC β-lactamases in dogs. Vet. Rec. 2014, 175, 202. [Google Scholar] [CrossRef]
  17. Damborg, P.; Morsing, M.K.; Petersen, T.; Bortolaia, V.; Guardabassi, L. CTX-M-1 and CTX-M-15-producing Escherichia coli in dog faeces from public gardens. Acta Vet. Scand. 2015, 57, 83. [Google Scholar] [CrossRef] [Green Version]
  18. Johnson, J.R.; Davis, G.; Clabots, C.; Johnston, B.D.; Porter, S.; DebRoy, C.; Pomputius, W.; Ender, P.T.; Cooperstock, M.; Slater, B.S.; et al. Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis. Open Forum. Infect. Dis. 2016, 3, 129. [Google Scholar] [CrossRef]
  19. Hordijk, J.; Schoormans, A.; Kwakernaak, M.; Duim, B.; Broens, E.; Dierikx, C.; Mevius, D.; Wagenaar, J.A. High prevalence of fecal carriage of extended spectrum β-lactamase/AmpC-producing Enterobacteriaceae in cats and dogs. Front. Microbiol. 2013, 4, 242. [Google Scholar] [CrossRef] [Green Version]
  20. Haenni, M.; Saras, E.; Métayer, V.; Médaille, C.; Madec, J.-Y. High Prevalence of bla CTX-M-1 /IncI1/ST3 and bla CMY-2 /IncI1/ST2 Plasmids in Healthy Urban Dogs in France. Antimicrob. Agents Chemother. 2014, 58, 5358–5362. [Google Scholar] [CrossRef] [Green Version]
  21. McDaniels, A.E.; Rice, E.W.; Reyes, A.L.; Johnson, C.H.; Haugland, R.A.; Stelma, G.N. Confirmational Identification of Escherichia coli, a Comparison of Genotypic and Phenotypic Assays for Glutamate Decarboxylase and beta-d-Glucuronidase. Appl. Environ. Microbiol. 1998, 64, 4113. [Google Scholar] [CrossRef] [Green Version]
  22. Padmavathy, B.; Vinoth, K.R.; Patel, A.; Deepika Swarnam, S.; Vaidehi, T.; Jaffar, A.B.M. Rapid and Sensitive Detection of Major Uropathogens in a Single-Pot Multiplex PCR Assay. Curr. Microbiol. 2012, 65, 44–53. [Google Scholar] [CrossRef]
  23. Féria, C.; Ferreira, E.J.D.; Gonçalves, J.; Caniça, M. Patterns and mechanisms of resistance to beta-lactams and beta-lactamase inhibitors in uropathogenic Escherichia coli isolated from dogs in Portugal. J. Antimicrob. Chemother. 2002, 49, 77–85. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  24. Doumith, M.; Day, M.J.; Hope, R.; Wain, J.; Woodford, N. Improved Multiplex PCR Strategy for Rapid Assignment of the Four Major Escherichia coli Phylogenetic Groups. J. Clin. Microbiol. 2012, 50, 3108–3110. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  25. CLSI. Performance Standards for Antimicrobial Susceptibility Testing, 27th Informational Supplement; Clinical and Laboratory Standards Institute: Wayne, PA, USA, 2020. [Google Scholar]
  26. Edelstein, M.; Pimkin, M.; Palagin, I.; Edelstein, I.; Stratchounski, L. Prevalence and Molecular Epidemiology of CTX-M Extended-Spectrum β-Lactamase-Producing Escherichia coli and Klebsiella pneumoniae in Russian Hospitals. Antimicrob. Agents Chemother. 2003, 47, 3724–3732. [Google Scholar] [CrossRef] [Green Version]
  27. Pomba, C.; Mendonça, N.; Costa, M.; Louro, D.; Baptista, B.; Ferreira, M.; Correia, J.D.; Caniça, M. Improved multiplex PCR method for the rapid detection of β-lactamase genes in Escherichia coli of animal origin. Diagn. Microbiol. Infect. Dis. 2006, 56, 103–106. [Google Scholar] [CrossRef] [PubMed]
  28. Woodford, N.; Fagan, E.J.; Ellington, M.J. Multiplex PCR for rapid detection of genes encoding CTX-M extended-spectrum β-lactamases. J. Antimicrob. Chemother. 2006, 57, 154–155. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  29. Perez-Perez, F.J.; Hanson, N.D. Detection of Plasmid-Mediated AmpC -Lactamase Genes in Clinical Isolates by Using Multiplex PCR. J. Clin. Microbiol. 2002, 40, 2153–2162. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  30. Marques, C.; Belas, A.; Franco, A.; Aboim, C.; Gama, L.T.; Pomba, C. Increase in antimicrobial resistance and emergence of major international high-risk clonal lineages in dogs and cats with urinary tract infection: 16 year retrospective study. J. Antimicrob. Chemother. 2018, 73, 377–384. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  31. Davin-Regli, A.; Pagès, J.-M. Enterobacter aerogenes and Enterobacter cloacae; versatile bacterial pathogens confronting antibiotic treatment. Front. Microbiol. 2015, 6, 392. [Google Scholar] [CrossRef] [Green Version]
  32. Nordmann, P.; Dortet, L.; Poirel, L. Rapid Detection of Extended-Spectrum-Lactamase-Producing Enterobacteriaceae. J. Clin. Microbiol. 2012, 50, 3016–3022. [Google Scholar] [CrossRef] [Green Version]
  33. Potron, A.; Poirel, L.; Rondinaud, E.; Nordmann, P. Intercontinental spread of OXA-48 beta-lactamase-producing Enterobacteriaceae over a 11-year period, 2001 to 2011. Euro. Surveill. 2013, 18, 20549. [Google Scholar] [CrossRef]
  34. Costa, D.; Poeta, P.; Sáenz, Y.; Coelho, A.C.; Matos, M.; Vinué, L.; Rodrigues, J.; Torres, C. Prevalence of antimicrobial resistance and resistance genes in faecal Escherichia coli isolates recovered from healthy pets. Vet. Microbiol. 2008, 127, 97–105. [Google Scholar] [CrossRef] [PubMed]
  35. Procter, T.D.; Pearl, D.L.; Finley, R.L.; Leonard, E.K.; Janecko, N.; Reid-Smith, R.J.; Weese, J.S.; Peregrine, A.S.; Sargeant, J.M. A Cross-Sectional Study Examining the Prevalence and Risk Factors for Anti-Microbial-Resistant Generic Escherichia coli in Domestic Dogs that Frequent Dog Parks in Three Cities in South-Western Ontario, Canada. Zoonoses Public Health 2014, 61, 250–259. [Google Scholar] [CrossRef] [PubMed]
  36. Aslantaş, Ö.; Yilmaz, E.Ş. Prevalence and molecular characterization of extended-spectrum β-lactamase (ESBL) and plasmidic AmpC β-lactamase (pAmpC) producing Escherichia coli in dogs. J. Vet. Sci. 2017, 79, 1024–1030. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  37. Dubos, R.J.; Schaedler, R.W. The effect of diet on the fecal bacterial flora of mice and on their resistance to infection. J. Exp. Med. 1962, 1, 1161–1172. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  38. Davies, R.H.; Lawes, J.R.; Wales, A.D. Raw diets for dogs and cats: A review, with particular reference to microbiological hazards. J. Small Anim. Pract. 2019, 60, 329–339. [Google Scholar] [CrossRef]
  39. Vich, V.A.; Collij, V.; Sanna, S.; Sinha, T.; Imhann, F.; Bourgonje, A.R.; Mujagic, Z.; Jonkers, D.; Masclee, A.A.M.; Fu, J.; et al. Impact of commonly used drugs on the composition and metabolic function of the gut microbiota. Nat. Commun. 2020, 11, 362. [Google Scholar] [CrossRef]
  40. van den Bunt, G.; Fluit, A.C.; Spaninks, M.P.; Timmerman, A.J.; Geurts, Y.; Kant, A.; Scharringa, J.; Mevius, D.; Wagenaar, J.A.; Bonten, M.J.M.; et al. Faecal carriage, risk factors, acquisition and persistence of ESBL-producing Enterobacteriaceae in dogs and cats and co-carriage with humans belonging to the same household. J. Antimicrob. Chemother. 2020, 75, 342–350. [Google Scholar] [CrossRef]
  41. Rantala, M.; Lahti, E.; Kuhalampi, J.; Pesonen, S.; Järvinen, A.-K.; Saijonmaa-Koulumies, L.; Honkanen-Buzalski, T. Antimicrobial resistance in Staphylococcus spp., Escherichia coli and Enterococcus spp. in dogs given antibiotics for chronic dermatological disorders, compared with non-treated control dogs. Acta Vet. Scand. 2004, 45, 37. [Google Scholar] [CrossRef]
Table 1. Descriptive statistics of healthy dogs sampled (n = 25) in this study.
Table 1. Descriptive statistics of healthy dogs sampled (n = 25) in this study.
Dogs Sampled % (n)
GenderFemale36.0 (9)
Male64.0 (16)
OriginPrivate owner100.0 (25)
Antimicrobial treatment in last yearYes50.0 (12)
No46.0 (11)
No data4.0 (1)
Hospitalization in last yearYes60.0 (15)
No40.0 (10)
Cohabitation with other animalsYes12.0 (3)
No88.0 (22)
Street accessYes68.0 (17)
No32.0 (8)
Shelter/hotel accessYes12.0 (3)
No88.0 (22)
Surgery reasonSoft tissues76.0 (19)
Orthopaedic24.0 (6)
Antimicrobial prophylactic treatmentYes92.0 (23)
No8.0 (2)
Table 2. Genotypic and phenotypic traits of ESBL/AmpC-producing Enterobacteriaceae from healthy dogs before surgery and after surgery (AS).
Table 2. Genotypic and phenotypic traits of ESBL/AmpC-producing Enterobacteriaceae from healthy dogs before surgery and after surgery (AS).
Animal GroupESBLs (%)p ValueIsolates IDBacteriaAntimicrobial Resistance Phenotypeβ-LactamasesE. coli Phylogroup
Before surgery (n = 25)20.00.0033FMVS1E. coliAMP KF CTXblaCTX-M-1groupB1
FMVS2E. coliAMP AMC KF CTX FOX CAZblaTEMD
FMVS14E. coliAMP AMC KF CTX FOX CAZblaSHVB1
FMVS18E. coliAMP AMC KF CTX FOX CAZblaTEMB1
FMVS20K. pneumoniae *AMP AMC KF CTX FOXblaSHV-
After surgery (AS) (n = 22)63.6FMVS1K. pneumoniae *AMP AMC KF CTX CAZblaOXA-1, blaTEM, blaCTX-M-1group-
FMVS2E. coliAMP AMC KF CTX FOX CAZblaTEMD
FMVS3aE. coliAMP AMC KF CTX FOX CAZblaTEMB2
FMVS3bK. pneumoniae *AMP AMC KF CTX CAZblaOXA-1, blaTEM, blaCTX-M-1group-
FMVS3cK. pneumoniae *AMP AMC KF CTX FOX CAZblaTEM,blaCTX-M-1group-
FMVS3dK. pneumoniae *AMP AMC KF CTXblaOXA-1, blaCTX-M-1group-
FMVS4E. cloacae **AMP KF CTX FOX CAZnd-
FMVS6E. cloacae **AMP KF CTX FOX CAZnd-
FMVS7E. coliAMP AMC KF CTX FOX CAZblaTEMB1
FMVS9E. coliAMP KF CTXblaCTX-M-1groupB2
FMVS11E. coliAMP AMC KF CTX FOX CAZblaOXA-1, blaTEMA
FMVS12E. cloacae **AMP KF CTX FOX CAZnd-
FMVS13E. coliAMP KF CTX CAZblaSHVB1
FMVS16E. coliAMP AMC KF CTX FOX CAZblaTEMA
FMVS17E. coliAMP AMC KF CTX FOX CAZblaTEMA
FMVS21E. coliAMP AMC KF CTX FOX CAZblaTEMB1
FMVS25E. coliAMP AMC KF CTX FOX CAZblaTEMA
Legend: AMP, Ampicillin; AMC, Amoxicillin/clavulanic acid; CTX, Cefotaxime; CAZ, Ceftazidime; FOX, Cefoxitin; KF, Cephalothin; nd, not detected. * K. pneumoniae is intrinsic resistant to AMP; ** E. cloacae is intrinsic resistant to AMP, AMC, first-generation cephalosporins, and FOX [25].
Table 3. Descriptive statistics of ESBL/AmpC-producing Enterobacteriaceae load (CFU/g of feces) per dog before surgery (n = 25) and after surgery (n = 22) by the General linear model procedure.
Table 3. Descriptive statistics of ESBL/AmpC-producing Enterobacteriaceae load (CFU/g of feces) per dog before surgery (n = 25) and after surgery (n = 22) by the General linear model procedure.
Animal GroupMean (CFU/g)SDSEMin (UFC/g)Max (UFC/g)p Value
Before surgery (n = 25)1.10 × 102 a4.51 × 1025.24 × 1050.02.25 × 1030.025
After surgery (n = 22)1.74 × 106 b5.33 × 1064.00 × 1050.01.84 × 107
Legend: SD, standard deviation; SE, standard error mean; Min, minimum; Max, maximum. Mean values with a character with different letters are statistically significant (p value = 0.025).
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Share and Cite

MDPI and ACS Style

Belas, A.; Correia, J.; Marques, C.; da Gama, L.T.; Pomba, C. ESBL/AmpC-Producing Enterobacteriaceae Fecal Colonization in Dogs after Elective Surgery. Microbiol. Res. 2021, 12, 907-915. https://doi.org/10.3390/microbiolres12040067

AMA Style

Belas A, Correia J, Marques C, da Gama LT, Pomba C. ESBL/AmpC-Producing Enterobacteriaceae Fecal Colonization in Dogs after Elective Surgery. Microbiology Research. 2021; 12(4):907-915. https://doi.org/10.3390/microbiolres12040067

Chicago/Turabian Style

Belas, Adriana, Joana Correia, Cátia Marques, Luís Telo da Gama, and Constança Pomba. 2021. "ESBL/AmpC-Producing Enterobacteriaceae Fecal Colonization in Dogs after Elective Surgery" Microbiology Research 12, no. 4: 907-915. https://doi.org/10.3390/microbiolres12040067

Article Metrics

Back to TopTop