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Keywords = inocula preservation

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15 pages, 1362 KiB  
Article
The Role of Natural Antimicrobials in Reducing the Virulence of Vibrio parahaemolyticus TPD in Shrimp Gut and Hepatopancreas Primary Cells and in a Post-Larvae Challenge Trial
by Lavinia Stef, Ioan Pet, Cosmin Alin Popescu, Gabi Dumitrescu, Liliana Petculescu Ciochina, Tiberiu Iancu, Iuliana Cretescu, Nicolae Corcionivoschi and Igori Balta
Int. J. Mol. Sci. 2025, 26(14), 6557; https://doi.org/10.3390/ijms26146557 - 8 Jul 2025
Viewed by 350
Abstract
Some Vibrio parahaemolyticus strains cause translucent post-larvae disease (VpTPD), leading to significant economic losses in shrimp farming. We aimed to identify whether a mixture of natural antimicrobials, AuraAqua (Aq), can protect white-leg shrimp (Penaeus vannamei) against the lethal [...] Read more.
Some Vibrio parahaemolyticus strains cause translucent post-larvae disease (VpTPD), leading to significant economic losses in shrimp farming. We aimed to identify whether a mixture of natural antimicrobials, AuraAqua (Aq), can protect white-leg shrimp (Penaeus vannamei) against the lethal effects of VpTPD and to understand its biological mode of action. Herein, we demonstrate that Aq, an antimicrobial mixture composed of a blend of organic acids, citrus, and olive extracts, suppressed VpTPD virulence at sub-inhibitory concentrations and conferred robust protection to shrimp. The minimum inhibitory and bactericidal concentrations against the VpTPD isolate were at 0.05% and 0.2%, respectively. At 0.05–0.1%, Aq reduced bacterial growth and downregulated six major virulence genes (vhvp-1, vhvp-2, vhvp-3, pirAVp, pirBVp, pirABVp), while leaving metabolic ldh expression unaltered. Parallel in vitro assays revealed diminished adhesion of VpTPD to primary shrimp gut and hepatopancreas epithelial cells and a ≈50% reduction in infection-induced extracellular H2O2, indicating an antioxidant effect. The treatment also triggered a time-dependent surge in extracellular alkaline phosphatase (ALP) activity, consistent with membrane permeabilization. In vivo, a challenge of post-larvae with 104 CFU/mL VpTPD resulted in 91% mortality after 45 h; co-treatment with 0.1% and 0.2% Aq reduced mortality to ≈12% and ≈6%, respectively, while 1% Aq achieved ≈98% survival. The clinical protection test confirmed that 0.1% Aq preserved high survival across four pathogen inocula (101–104 CFU/mL). Conclusively, Aq destabilized the pathogen and therefore transcriptionally silenced multiple virulence determinants, translating into significant in-pond protection for controlling VpTPD for shrimp aquaculture. Full article
(This article belongs to the Section Molecular Toxicology)
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16 pages, 2318 KiB  
Article
Effect of Temperature on the Inocula Preservation, Mesophilic Anaerobic Digestion Start-Up, and Microbial Community Dynamics
by Jingwei Wu, Huan Zhang, Ye Zhao, Xufeng Yuan and Zongjun Cui
Agronomy 2024, 14(12), 2991; https://doi.org/10.3390/agronomy14122991 - 16 Dec 2024
Cited by 2 | Viewed by 1482
Abstract
Anaerobic digestion (AD) is a well-established technology for the sustainable conversion of agricultural organic by-products and waste into bioenergy. Temperature is crucial for optimizing methane production through inocula preservation and reactor start-up in AD. The preservation of inocula induced by temperature has rarely [...] Read more.
Anaerobic digestion (AD) is a well-established technology for the sustainable conversion of agricultural organic by-products and waste into bioenergy. Temperature is crucial for optimizing methane production through inocula preservation and reactor start-up in AD. The preservation of inocula induced by temperature has rarely been assessed from an engineering perspective. There has also been limited exploration of the influence of high-to-moderate temperature transition on the initiation of AD. This study employed continuous mesophilic AD reactors with potential engineering applications to conduct revival tests. These tests evaluated the methane production activity of sludge stored at different temperatures and investigated the impact of high-temperature initiation on mesophilic AD. Additionally, we elucidated the correlation between these assessments and microbial diversity as well as composition. The results indicated that bacterial diversity was higher in the inoculum stored at 35 °C compared to 15 °C, ensuring a stable start-up operation of the mesophilic AD. The richness of the bacteria and diversity of the archaea remained stable during the transition from high to mesophilic temperatures. This was conducive to enhancing methanogenic activity of mesophilic AD initiated at 55 °C. The continuously operated AD system showed significant differences in microbial composition compared to its inoculum. Increased abundance of Coriobacteriaceae and Prevotellaceae led to propionate and butyrate accumulation, respectively, reducing AD operational capacity. Methanogenic archaea were less diverse in AD initiated with low-temperature preserved inoculum compared to that with a medium temperature. Streptococcaceae induced by high temperarure could promote AD stability. Hydrogenotrophic methanogens had a competitive advantage in mesophilic AD due to their prior exposure to high-temperature initiation, possibly influenced by Thermotogaceae. Full article
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20 pages, 1510 KiB  
Article
Convergent Microbial Community Formation in Replicate Anaerobic Reactors Inoculated from Different Sources and Treating Ersatz Crew Waste
by Lisa M. Steinberg, Amanda J. Martino and Christopher H. House
Life 2021, 11(12), 1374; https://doi.org/10.3390/life11121374 - 10 Dec 2021
Cited by 3 | Viewed by 2879
Abstract
Future manned space travel will require efficient recycling of nutrients from organic waste back into food production. Microbial systems are a low-energy, efficient means of nutrient recycling, but their use in a life support system requires predictability and reproducibility in community formation and [...] Read more.
Future manned space travel will require efficient recycling of nutrients from organic waste back into food production. Microbial systems are a low-energy, efficient means of nutrient recycling, but their use in a life support system requires predictability and reproducibility in community formation and reactor performance. To assess the reproducibility of microbial community formation in fixed-film reactors, we inoculated replicate anaerobic reactors from two methanogenic inocula: a lab-scale fixed-film, plug-flow anaerobic reactor and an acidic transitional fen. Reactors were operated under identical conditions, and we assessed reactor performance and used 16s rDNA amplicon sequencing to determine microbial community formation. Reactor microbial communities were dominated by similar groups, but differences in community membership persisted in reactors inoculated from different sources. Reactor performance overlapped, suggesting a convergence of both reactor communities and organic matter mineralization. The results of this study suggest an optimized microbial community could be preserved and used to start new, or restart failed, anaerobic reactors in a life support system with predictable reactor performance. Full article
(This article belongs to the Collection Space Life Sciences)
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10 pages, 1288 KiB  
Article
A Simple Method for the Acquisition and Transmission of Brassica Yellows Virus from Transgenic Plants and Frozen Infected Leaves by Aphids
by Deng-Pan Zuo, Meng-Jun He, Xiang-Ru Chen, Ru-Jian Hu, Tian-Yu Zhao, Xiao-Yan Zhang, Yan-Mei Peng, Ying Wang, Da-Wei Li, Jia-Lin Yu and Cheng-Gui Han
Plants 2021, 10(9), 1944; https://doi.org/10.3390/plants10091944 - 18 Sep 2021
Cited by 6 | Viewed by 3016
Abstract
Brassica yellows virus (BrYV) is a tentative species of the genus Polerovirus, which occurs widely, and mostly damages Brassicaceae plants in East Asia. Because BrYV cannot be transmitted mechanically, an insect-based transmission method is required for further virus research. Here, a reliable [...] Read more.
Brassica yellows virus (BrYV) is a tentative species of the genus Polerovirus, which occurs widely, and mostly damages Brassicaceae plants in East Asia. Because BrYV cannot be transmitted mechanically, an insect-based transmission method is required for further virus research. Here, a reliable and unrestricted method is described, in which non-viruliferous aphids (Myzus persicae) acquired BrYV from transgenic Arabidopsis thaliana, harboring the full-length viral genome germinated from seeds and its frozen leaves. The aphids then transmitted the virus to healthy plants. There was no significant difference in acquisition rates between fresh and frozen infected leaves, although the transmission rate from frozen infected leaves was lower compared to fresh infected leaves. This simple novel method may be used to preserve viral inocula, evaluate host varietal resistance to BrYV, and investigate interactions among BrYV, aphids, and hosts. Full article
(This article belongs to the Special Issue Plant Virus-Aphid Relationships)
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14 pages, 328 KiB  
Article
Antimicrobial Activity of a Neem Cake Extract in a Broth Model Meat System
by Paola Del Serrone and Marcello Nicoletti
Int. J. Environ. Res. Public Health 2013, 10(8), 3282-3295; https://doi.org/10.3390/ijerph10083282 - 2 Aug 2013
Cited by 25 | Viewed by 9405
Abstract
This work reports on the antimicrobial activity of an ethyl acetate extract of neem (Azadirachta indica) cake (NCE) against bacteria affecting the quality of retail fresh meat in a broth model meat system. NCE (100 µg) was also tested by the [...] Read more.
This work reports on the antimicrobial activity of an ethyl acetate extract of neem (Azadirachta indica) cake (NCE) against bacteria affecting the quality of retail fresh meat in a broth model meat system. NCE (100 µg) was also tested by the agar disc diffusion method. It inhibited the growth of all tested microorganisms. The NCE growth inhibition zone (IZ) ranged 11.33–22.67 mm while the ciprofloxacin (10 µg) IZ ranged from 23.41–32.67 mm. There was no significant difference (p ≤ 0.05) between the antimicrobial activity of NCE and ciprofloxacin vs. C. jejuni and Leuconostoc spp. The NCE antibacterial activity was moreover determined at lower concentrations (1:10–1:100,000) in micro-assays. The percent growth reduction ranged from 61 ± 2.08–92 ± 3.21. The higher bacterial growth reduction was obtained at 10 µg concentration of NCE. Species-specific PCR and multiplex PCR with the DNA dye propidium monoazide were used to directly detect viable bacterial cells from experimentally contaminated meat samples. The numbers of bacterial cells never significantly (p ≤ 0.05) exceeded the inocula concentration used to experimentally contaminate the NCE treated meat. This report represents a screening methodology to evaluate the antimicrobial capability of a herbal extract to preserve meat. Full article
(This article belongs to the Special Issue Food Safety and Public Health)
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