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Keywords = Ripogonum

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24 pages, 10626 KB  
Article
The Complete Chloroplast Genomes of Nine Smilacaceae Species from Hong Kong: Inferring Infra- and Inter-Familial Phylogeny
by Kwan-Ho Wong, Tin-Yan Siu, Stacey Shun-Kei Tsang, Bobby Lim-Ho Kong, Hoi-Yan Wu, Grace Wing-Chiu But, Jerome Ho-Lam Hui, Pang-Chui Shaw and David Tai-Wai Lau
Int. J. Mol. Sci. 2023, 24(8), 7460; https://doi.org/10.3390/ijms24087460 - 18 Apr 2023
Cited by 5 | Viewed by 2877
Abstract
The Smilacaceae is a cosmopolitan family consisting of 200–370 described species. The family includes two widely accepted genera, namely Smilax and Heterosmilax. Among them, the taxonomical status of Heterosmilax has been continuously challenged. Seven Smilax and two Heterosmilax species can be found [...] Read more.
The Smilacaceae is a cosmopolitan family consisting of 200–370 described species. The family includes two widely accepted genera, namely Smilax and Heterosmilax. Among them, the taxonomical status of Heterosmilax has been continuously challenged. Seven Smilax and two Heterosmilax species can be found in Hong Kong, with most of them having medicinal importance. This study aims to revisit the infra-familial and inter-familial relationships of the Smilacaceae using complete chloroplast genomes. The chloroplast genomes of the nine Smilacaceae species from Hong Kong were assembled and annotated, which had sizes of 157,885 bp to 159,007 bp; each of them was identically annotated for 132 genes, including 86 protein-coding genes, 38 transfer RNA genes, and 8 ribosomal RNA genes. The generic status of Heterosmilax was not supported because it was nested within the Smilax clade in the phylogenetic trees, echoing previous molecular and morphological studies. We suggest delimitating the genus Heterosmilax as a section under the genus Smilax. The results of phylogenomic analysis support the monophyly of Smilacaceae and the exclusion of Ripogonum from the family. This study contributes to the systematics and taxonomy of monocotyledons, authentication of medicinal Smilacaceae, and conservation of plant diversity. Full article
(This article belongs to the Special Issue Tropical and Subtropical Plant Genomics)
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