Immune-Mediated Colitis Induced by Immune Checkpoint Inhibitors: Pathophysiology, Clinical Management, and the Emerging Role of Fecal Microbiota Transplantation
Abstract
1. Introduction
2. Methods
3. Pathophysiology and Immunological Mechanisms
4. Risk Assessment and Predictive Biomarkers of Immune-Mediated Colitis
4.1. Risk According to Type of Therapy Used
4.2. Risk According to Cancer Type
4.3. Patient-Specific Factors
4.3.1. Patients with Pre-Existing IBD
4.3.2. Patients with Preexisting Autoimmune Comorbidities
4.4. Predictive Biomarkers
5. Clinical Presentation, Diagnosis
6. Management and Treatment Strategies
6.1. First-Line Therapy
6.1.1. Mild Colitis (CTCAE Grade 1)
6.1.2. Moderate to Severe Colitis (CTCAE Grade ≥ 2)
6.2. Second-Line Therapy
6.3. Third-Line and Refractory Colitis
6.4. Supportive and Preventive Measures
7. Future Directions and Emerging Therapies
7.1. Personalized Approaches
7.2. Fecal Microbiota Transplantation
7.3. Preventive and Combined Strategies
8. Oncological Outcomes After ICI Discontinuation
9. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| AI | Artificial Intelligence |
| ASCA | Anti-Saccharomyces Cerevisiae Antibodies |
| CD | Crohn’s Disease |
| CMV | Cytomegalovirus |
| CR | Complete Response |
| CRP | C-Reactive Protein |
| CT | Computed Tomography |
| CTCAE | Common Terminology Criteria for Adverse Events |
| CTLA-4 | Cytotoxic T-Lymphocyte-Associated Antigen 4 |
| DCR | Disease Control Rate |
| FC | Fecal Calprotectin |
| FMT | Fecal Microbiota Transplantation |
| HLA | Human Leukocyte Antigen |
| IBD | Inflammatory Bowel Disease |
| ICAM-1 | Intercellular Adhesion Molecule-1 |
| ICI | Immune Checkpoint Inhibitor |
| IFX | Infliximab |
| IL | Interleukin |
| IMC | Immune-Mediated colitis |
| imDC | Immune Mediated Diarrhea and Colitis |
| irAEs | Immune-Related Adverse Events |
| JAK | Janus Kinase |
| LDH | Lactate Dehydrogenase |
| MEK | Mitogen-activated Extracellular signal-regulated Kinase |
| MES | Mayo Endoscopic Subscore |
| miRNA | MicroRNA |
| NLR | Neutrophil-to-Lymphocyte Ratio |
| NRS-2002 | Nutrition Risk Screening 2002 |
| NSAID | Nonsteroidal Anti-Inflammatory Drugs |
| NSCLC | Non-Small Cell Lung Cancer |
| OmpC | Outer Membrane Protein C |
| OS | Overall Survival |
| pANCA | Perinuclear Anti-Neutrophil Cytoplasmic Antibody |
| PD-1 | Programmed Death-1 |
| PD-L1 | Programmed Death-Ligand1 |
| PET/CT | Positron Emission Tomography/Computed Tomography |
| PFS | Progression-Free Survival |
| PPI | Proton Pump Inhibitor |
| RCC | Renal Cell Carcinoma |
| SARC-F | Sarcopenia Assessment Questionnaire |
| SCFA | Short-Chain Fatty Acid |
| Tregs | Regulatory T Cells |
| TFS | Treatment-Free Survival |
| UC | Ulcerative Colitis |
| UGT1A1 | UDP-Glucuronosyltransferase 1A1 |
| VCAM-1 | Vascular Cell Adhesion Molecule-1 |
| VDZ | Vedolizumab |
| VEGF | Vascular Endothelial Growth Factor |
| QoL | Quality of Life |
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| ICI | Incidence of Diarrhea (CTCAE 1–4) | Incidence of IMC (CTCAE 1–4) | Severe IMC (CTCAE ≥ 3) | Time to Onset (Average) |
|---|---|---|---|---|
| anti-CTLA-4 | 30–35% | ~8–22% | 5–10% | ~6–7 weeks |
| anti-PD-1/PD-L1 | 12–14% | ~1–5%; | 1–2% | ~1 week–2 years |
| anti-PD-1/(L)1 + anti-CTLA-4 | up to 40% | 15–30% | 10–15% | ~7 weeks |
| Grade 1 | Grade 2 | Grade 3 | Grade 4 | Grade 5 | |
|---|---|---|---|---|---|
| Diarrhea | Increase of <4 stools/d over baseline; mild increase on ostomy output compared with baseline | Increase of 4–6 stools/d over baseline; moderate increase in ostomy output compared with baseline; limiting instrumental ADL | Increase of 7 stools/d over baseline; hospitalization indicated; severe increase in ostomy output compared with baseline; limiting self-care ADL * | Life-threatening consequences, urgent intervention indicated | Death |
| Colitis | Asymptomatic; clinical or diagnostic observations; intervention not indicated | Abdominal pain; mucus or blood in stool | Severe or persistent abdominal pain; fever; ileus; peritoneal signs | Life-threatening consequences: urgent intervention indicated | Death |
| Severity | Endoscopic Features |
|---|---|
| Mild | Normal endoscopy and normal histology |
| Moderate | Normal colon appearance with pathology showing inflammation; small ulcers <1 cm, shallow ulcer <2 mm, and/or number of ulcers <3; inflammation limited to the left colon only, no ulcer inflammation |
| High | Large ulcer ≥1 cm, deep ulcer ≥2 mm, and/or number of ulcers ≥3; extensive inflammation beyond left colon |
| Agent/Intervention | Dosing/Administration | Timing/Duration | Response Rates | Key Considerations/Contraindications |
|---|---|---|---|---|
| Corticosteroids [5,7,45,67,68,69] | Oral prednisone/methylprednisolone 0.5–1 mg/kg/day (CTCAE 2; outpatient care) IV methylprednisolone 1–2 mg/kg/day (CTCAE ≥ 3 or insufficient response on/relapse off oral corticosteroids; inpatient care) Oral budesonide MMX 9 mg/day (microscopic colitis) | 4–6 weeks | 70% | Response assessment at day 3–5; taper over 4–6 weeks. Increased risk of AE, serious infections and mortality. May impair antitumor ICI induced immune response. Relapse rates 34–44%. |
| Infliximab [5,7,70,71] | Intravenous 5 mg/kg (week 0, repeat as needed on week 2 and 6; maintenance every 8 weeks) | 6 weeks induction; maintenance as indicated | 88% clinical remission; 50.9% corticosteroid-free remission at week 24 | Fast acting (response within 7–14 days expected). Moderate to severe steroid-refractory disease (especially if risk of complications); increased risk of serious infections and may impair antitumor ICI induced immune response. Biosimilars available. No data on sc formulation, dose escalation, TDM, combination therapy with immunomodulators. |
| Vedolizumab [5,7,70] | Intravenous 300 mg (week 0, repeat as needed on week 2 and 6; maintenance every 8 weeks) | 6 weeks induction; maintenance as indicated | 89% clinical remission | Moderate steroid or IFX refractory disease. Gut selective without systemic immunosuppression. Slower onset of action (>14 days); use in severe cases with caution. No biosimilars available. No data on subcutaneous formulation, dose escalation, therapeutic drug monitoring. |
| Tofacitinib [72,73,74] | Oral 2 × 10 mg/day | 4–25 weeks | Clinical response within 5 days; clinical, biochemical, endoscopic and histologic remission at week 5–6. | Case reports in IFX refractory disease. Thromboembolism risk assessment needed. Generally, not recommended for elderly. |
| Ustekinumab [74,75,76] | Single IV induction dose according to body weight (260 mg for <55 kg; 390 mg for 55–85 kg; 520 mg for >85 kg) followed by 90 mg sc dose every 8 weeks after induction dose | >6 months | Clinical remission at with significant improvement in endoscopy after 6 months | Case reports in refractory colitis. Favorable and established long-term safety profile in IBD literature. |
| Tocilizumab [77] | IV 8 mg/kg every 4 weeks | 20 weeks | At week 24 84% had ≥1 grade steroid-free symptom reduction | Median time to response 14 days. Results from open-label clinical study. 25% of patients had serious treatment related AEs. |
| Mycophenolate mofetil [78] | Oral enteric-coated 2 × 500–1000 mg/day | N/A | 44% clinical remission in IFX refractory IMC. | Concomitant with corticosteroids hastens improvement of colitis or reduce the incidence of relapse. |
| Cyclosporine/Tacrolimus [74,79] | Oral cyclosporine 5 mg/kg in a split twice-daily dosing or IV cyclosporine 2 mg/kg/day | 54 days | 72.7–74% of patients responded to calcineurin inhibitor in IFX refractory IMC | Case series. Trough levels 100–200 ng/mL. Risk of renal impairment development. |
| Mesalamine [67] | Oral; dosing N/A | 241 days | May be effective for patients with delayed onset of CTCAE 1–2 colitis and no ulcerations on endoscopy. | |
| Loperamide [5,7] | Oral; up to 16 mg/day | Up to 72 h | For CTCAE 1 colitis. Caution in malnourished and moderately to severely dehydrated patients. | |
| Cholestyramine [80] | Oral; dosing N/A | 241 days | May be effective for patients with delayed onset of Grade 1–2 colitis and no ulcerations on endoscopy. | |
| Probiotics [81] | Commercially available probiotics (strains and dosing were not specified) | N/A | N/A | No significant microbiome alterations or improved clinical outcomes in patients receiving ICI for melanoma. |
| Study | Design | Patients | Prior Treatment | Donor | FMT Route | Number of FMTs | Clinical Outcomes | Adverse Effects | Microbiome Findings |
|---|---|---|---|---|---|---|---|---|---|
| [120] | Case series | 2 | Steroids Infliximab | Single healthy donor | Colonoscopy | 1 (patient 1) 2 (patient 2) | Complete clinical and endoscopic remission | Mild, self-limited GI symptoms | Shift toward donor-like microbiota; enrichment of Bifidobacterium spp. (both) and Blautia spp. (one); increased mucosal Tregs |
| [121] | Single case report | 1 | Steroids Infliximab Vedolizumab Mycophenolate mofetil Mesalamine | Healthy donor | Colonoscopy | 1 | Complete clinical remission | No serious adverse events | Not reported |
| [122] | Multicenter case series | 12 | Steroids Infliximab Vedolizumab | 4 healthy donors | Colonoscopy | Mostly 1, 3 patients 2 | Clinical improvement 10/12 (83%); complete remission 7 (58%); partial 3 (25%); 2 non-responders | Mostly mild transient symptoms | Shift toward donor-like microbiota, increased alpha-diversity; enrichment of Bifidobacterium and Collinsella |
| [123] | Prospective observational study | 62 | Immunosuppressive therapy | Not reported | Not reported | Not reported | Clinical improvement ~80% (patient-reported outcomes) | Mild transient adverse events ~37% | Not reported |
| [124] | Ongoing prospective trial (first-line FMT) | 12 | None | Not reported | Not reported | Not reported | Remission 75%; 2 required subsequent immunosuppression | No major safety concerns reported | Not reported |
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© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
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Belosic Halle, Z.; Tomasic, V.; Biscanin, A.; Cacic, P.; Saric, I.; Mustapic, S.; Stojic, J.; Luetic, K.; Bekic, D.; Paic, M.; et al. Immune-Mediated Colitis Induced by Immune Checkpoint Inhibitors: Pathophysiology, Clinical Management, and the Emerging Role of Fecal Microbiota Transplantation. Biomedicines 2026, 14, 683. https://doi.org/10.3390/biomedicines14030683
Belosic Halle Z, Tomasic V, Biscanin A, Cacic P, Saric I, Mustapic S, Stojic J, Luetic K, Bekic D, Paic M, et al. Immune-Mediated Colitis Induced by Immune Checkpoint Inhibitors: Pathophysiology, Clinical Management, and the Emerging Role of Fecal Microbiota Transplantation. Biomedicines. 2026; 14(3):683. https://doi.org/10.3390/biomedicines14030683
Chicago/Turabian StyleBelosic Halle, Zeljka, Vedran Tomasic, Alen Biscanin, Petra Cacic, Ivona Saric, Sanda Mustapic, Josip Stojic, Kresimir Luetic, Dinko Bekic, Matej Paic, and et al. 2026. "Immune-Mediated Colitis Induced by Immune Checkpoint Inhibitors: Pathophysiology, Clinical Management, and the Emerging Role of Fecal Microbiota Transplantation" Biomedicines 14, no. 3: 683. https://doi.org/10.3390/biomedicines14030683
APA StyleBelosic Halle, Z., Tomasic, V., Biscanin, A., Cacic, P., Saric, I., Mustapic, S., Stojic, J., Luetic, K., Bekic, D., Paic, M., Micetic, D., Krznaric Zrnic, I., Olic, I., Razov Radas, M., Skocilic, I., Golcic, M., Rados, L., Radic, J., Prejac, J., & Mikolasevic, I. (2026). Immune-Mediated Colitis Induced by Immune Checkpoint Inhibitors: Pathophysiology, Clinical Management, and the Emerging Role of Fecal Microbiota Transplantation. Biomedicines, 14(3), 683. https://doi.org/10.3390/biomedicines14030683

