Special Issue "Microbial Ecology and Diversity"

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A special issue of Diversity (ISSN 1424-2818).

Deadline for manuscript submissions: closed (15 April 2013)

Special Issue Editors

Guest Editor
Dr. Kristen M. DeAngelis
Department of Microbiology, University of Massachusetts Amherst, 102 Morrill IV N, 639 N. Pleasant St., Amherst, MA 01003-9298, USA
Website: http://www.bio.umass.edu/micro/faculty/deangelis.html
E-Mail: deangelis@microbio.umass.edu
Phone: +1 413 577 4669
Fax: +1 413 545 1578
Interests: microbial ecology of terrestrial ecosystems; effects of climate change stress on populations and communities; lignocellulose decomposition; plant-microbial interactions in the rhizosphere

Guest Editor
Prof. Dr. Susan Leschine
Department of Veterinary and Animal Sciences, University of Massachusetts Amherst, 212 Morrill IV N, 639 N. Pleasant St., Amherst, MA 01003-9298, USA
Website: http://www.bio.umass.edu/micro/faculty/leschine.html
E-Mail: leschine@vasci.umass.edu
Phone: +1 413 545 0673
Fax: +1 413 545 1578
Interests: microbial physiology and diversity; soil microbiology; cellulose decomposition; biofilms; role of digestive tract microbes in animal health

Special Issue Information

Dear Colleagues,

Microbes embody the vast diversity of life on Earth. The extensive physiological diversity of microbes has long been recognized through traditional cultivation-based methods; however, with the advent of molecular techniques for community analysis, estimates of richness have increased dramatically. New technologies and lower DNA sequencing costs have led to an explosion in sequence-based microbial community analyses such as metagenomics, revealing astonishing diversity. The challenge now is to tie this richness and complexity to ecosystem function. In their natural environments microbes interact with each other and often with plants and animals. Such interactions are essential for ecosystem function and may relate to plant and animal health, biogeochemical cycling, and numerous other processes. Defining the microbial role in ecosystem function is complicated in part because microbial functions feed back at many scales. At the single cell scale, microbes sense and respond to their environments. At the population-level, there are myriad chemical inter- and intra-species communications that control group behaviors. At the community scale, composition changes with environmental factors, altering nutrient pools and process rates. 
This “Microbial Ecology and Diversity” Special Issue focuses on linking richness and composition of complex microbial communities with ecosystem function. Questions to be addressed include: How are microbial community structures and function related? What interactions with the environment or with other organisms control microbial activity? What can be gained or lost from examining natural versus controlled, laboratory systems? With this in mind, we hope to advance understanding of interactions among members of these communities, with associated plants and animals, as well as with their environment.

Prof. Dr. Kristen M. DeAngelis
Prof. Dr. Susan Leschine
Guest Editors

Submission

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. Papers will be published continuously (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are refereed through a peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Diversity is an international peer-reviewed Open Access quarterly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 800 CHF (Swiss Francs).


Keywords

  • microbial ecology
  • microbial diversity
  • community analysis
  • community structure and function
  • sequence-based techniques
  • microbiome
  • phylogeny
  • biogeochemical cycles

Published Papers (8 papers)

Diversity 2013, 5(3), 680-702; doi:10.3390/d5030680
Received: 15 May 2013; in revised form: 5 July 2013 / Accepted: 8 August 2013 / Published: 6 September 2013
Show/Hide Abstract | Download PDF Full-text (753 KB) | View HTML Full-text | Download XML Full-text

Diversity 2013, 5(3), 641-656; doi:10.3390/d5030641
Received: 22 May 2013; in revised form: 2 August 2013 / Accepted: 13 August 2013 / Published: 19 August 2013
Show/Hide Abstract | Download PDF Full-text (1012 KB) | View HTML Full-text | Download XML Full-text

Diversity 2013, 5(3), 627-640; doi:10.3390/d5030627
Received: 17 May 2013; in revised form: 21 June 2013 / Accepted: 26 June 2013 / Published: 9 August 2013
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Diversity 2013, 5(3), 581-612; doi:10.3390/d5030581
Received: 6 May 2013; in revised form: 21 June 2013 / Accepted: 25 June 2013 / Published: 2 August 2013
Show/Hide Abstract | Download PDF Full-text (565 KB) | View HTML Full-text | Download XML Full-text

Diversity 2013, 5(3), 541-556; doi:10.3390/d5030541
Received: 6 June 2013; in revised form: 26 June 2013 / Accepted: 10 July 2013 / Published: 31 July 2013
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abstract graphic

Diversity 2013, 5(3), 461-478; doi:10.3390/d5030461
Received: 15 April 2013; in revised form: 29 May 2013 / Accepted: 21 June 2013 / Published: 3 July 2013
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Diversity 2013, 5(3), 426-460; doi:10.3390/d5030426
Received: 22 April 2013; in revised form: 15 May 2013 / Accepted: 27 May 2013 / Published: 25 June 2013
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abstract graphic

Diversity 2013, 5(2), 409-425; doi:10.3390/d5020409
Received: 15 April 2013; in revised form: 27 April 2013 / Accepted: 17 May 2013 / Published: 3 June 2013
Show/Hide Abstract | Download PDF Full-text (519 KB) | View HTML Full-text | Download XML Full-text

Last update: 14 August 2012

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