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Native Grass Enhances Bird, Dragonfly, Butterfly and Plant Biodiversity Relative to Conventional Crops in Midwest, USA -
Making the Connection Between PFASs and Agriculture Using the Example of Minnesota, USA: A Review -
LiDAR-IMU Sensor Fusion-Based SLAM for Enhanced Autonomous Navigation in Orchards -
Toward Sustainable Broiler Production: Evaluating Microbial Protein as Supplementation for Conventional Feed Proteins -
Different Responses to Salinity of Pythium spp. Causing Root Rot on Atriplex hortensis var. rubra Grown in Hydroponics
Journal Description
Agriculture
Agriculture
is an international, scientific peer-reviewed open access journal published semimonthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, AGRIS, RePEc, and other databases.
- Journal Rank: JCR - Q1 (Agronomy) / CiteScore - Q1 (Plant Science)
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 18 days after submission; acceptance to publication is undertaken in 1.9 days (median values for papers published in this journal in the first half of 2025).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Companion journals for Agriculture include: Poultry, Grasses, Crops and AIPA.
Impact Factor:
3.6 (2024);
5-Year Impact Factor:
3.8 (2024)
Latest Articles
A Novel Laboratory Protocol for Pollen Viability Assessment to Inform Biosafety Evaluation of Transgenic Rice (Oryza sativa L.)
Agriculture 2025, 15(23), 2420; https://doi.org/10.3390/agriculture15232420 (registering DOI) - 24 Nov 2025
Abstract
Rice (Oryza sativa L.) is a vital staple crop, and the environmental risk assessment of transgenic varieties is crucial for formulating biosafety policies. Rice pollen grains are spherical, with an average diameter of 40.03 ± 2.75 μm. This study established a standardized
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Rice (Oryza sativa L.) is a vital staple crop, and the environmental risk assessment of transgenic varieties is crucial for formulating biosafety policies. Rice pollen grains are spherical, with an average diameter of 40.03 ± 2.75 μm. This study established a standardized protocol for in vitro pollen germination by first optimizing key culture conditions. A single-factor experimental design identified the optimal medium composition as 150 g/L sucrose, 40 mg/L boric acid, 20 mg/L calcium chloride, 10 mg/L monopotassium phosphate, and 10 mg/L magnesium sulfate. The ideal germination temperature was determined to be 31 ± 1 °C, with no germination observed below 16 °C or above 40 °C. Pollen germination rates declined significantly within 5 min post-isolation and ceased completely after 30 min. Building on this optimized protocol, a standardized evaluation method was developed, defining key assessment conditions at temperatures of 25/31/37 °C and post-isolation times of 0/5/15 min. Under these defined conditions, the pollen viability of glyphosate-resistant transgenic rice G2-6 was compared to its non-transgenic recipient ZH11. No significant differences were found at any tested time–temperature combination (p > 0.05). This work establishes a practical and reproducible standard for transgenic rice pollen assessment, offering a scientific basis for evidence-based biosafety regulation and policy-making.
Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
Open AccessArticle
Organic Fertilizer and Deep Tillage Synergistically Regulate Soil Physicochemical Properties and Aggregate-Associated Distribution of Carbon and Nitrogen in Dryland Foxtail Millet Fields
by
Zhihong Wang, Zhigang Wang, Tingyue Huo, Jing Xu, Fan Xia, Lei Hou, Chao Wang, Wude Yang and Meichen Feng
Agriculture 2025, 15(23), 2419; https://doi.org/10.3390/agriculture15232419 (registering DOI) - 24 Nov 2025
Abstract
Foxtail millet (Setaria italica L.), a typical dryland crop, has a high nutrient uptake capacity, which can lead to rapid soil nutrient depletion. Establishing soil conservation strategies compatible with the high yield traits of hybrid millet is crucial. Although organic fertilization and
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Foxtail millet (Setaria italica L.), a typical dryland crop, has a high nutrient uptake capacity, which can lead to rapid soil nutrient depletion. Establishing soil conservation strategies compatible with the high yield traits of hybrid millet is crucial. Although organic fertilization and deep tillage are proven measures for maintaining soil productivity, their effects on dryland crops like millet remain understudied. This study investigated Zhangzagu 10 under five treatments: rotary tillage without fertilization (RT), rotary tillage with compound fertilizer (RTC), rotary tillage with organic fertilizer (RTO), deep tillage with organic fertilizer at 20–30 cm (DT1O), and deep tillage with organic fertilizer at 30–40 cm (DT2O). Soil physicochemical properties were measured at seven sampling periods and four tillage layer depths in a two-year field experiment. Compared to RT, RTO increased organic carbon and total nitrogen in mechanically stable macro-aggregates (0–20 cm) by up to 141.2% and 135.14%, respectively. Corresponding increases in water-stable aggregates reached 105.9% for organic carbon and 193.33% for total nitrogen. RTO also enhanced the pH buffering capacity of the topsoil while reducing soil bulk density and solid volume fraction in the surface layer during the late growth stages of foxtail millet. Combining organic fertilization with deep tillage (DT1O and DT2O) further optimized subsoil (20–40 cm) structure, increasing macro-aggregate content and stability, with effects intensifying at greater tillage depths. The integration of organic fertilization and deep tillage synergistically improved soil structure and nutrient distribution, offering a sustainable approach for dryland foxtail millet production.
Full article
(This article belongs to the Section Agricultural Soils)
Open AccessArticle
Prediction Model for the Oscillation Trajectory of Trellised Tomatoes Based on ARIMA-EEMD-LSTM
by
Yun Wu, Yongnian Zhang, Peilong Zhao, Xiaolei Zhang, Xiaochan Wang, Maohua Xiao and Yinlong Zhu
Agriculture 2025, 15(23), 2418; https://doi.org/10.3390/agriculture15232418 (registering DOI) - 24 Nov 2025
Abstract
Second-order damping oscillation models are incapable of precisely predicting superimposed and multi-fruit collision-induced oscillations. In view of this problem, an ARIMA-EEMD-LSTM hybrid model for predicting the oscillation trajectories of trellised tomatoes was proposed in this study. First, the oscillation trajectories of trellised tomatoes
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Second-order damping oscillation models are incapable of precisely predicting superimposed and multi-fruit collision-induced oscillations. In view of this problem, an ARIMA-EEMD-LSTM hybrid model for predicting the oscillation trajectories of trellised tomatoes was proposed in this study. First, the oscillation trajectories of trellised tomatoes under different picking forces were captured with the aid of the Nokov motion capture system, and then the collected oscillation trajectory datasets were then divided into training and test subsets. Afterwards, the ensemble empirical mode decomposition (EEMD) method was employed to decompose oscillation signals into multiple intrinsic mode function (IMF) components, of which different components were predicted by different models. Specifically, high-frequency components were predicted by the long short-term memory (LSTM) model while low-frequency components were predicted by the autoregressive integrated moving average (ARIMA) model. The final oscillation trajectory prediction model for trellised tomatoes was constructed by integrating these components. Finally, the constructed model was experimentally validated and applied to an analysis of single-fruit oscillations and multi-fruit oscillations (including collision oscillations and superposition oscillations). The following experimental results were yielded: Under single-fruit oscillation conditions, the prediction accuracy reached an RMSE of 0.1008–0.2429 mm, an MAE of 0.0751–0.1840 mm, and an MAPE of 0.01–0.06%. Under multi-fruit oscillation conditions, the prediction accuracy yielded an RMSE of 0.1521–0.6740 mm, an MAE of 0.1084–0.5323 mm, and an MAPE of 0.01–0.27%. The research results serve as a reference for the dynamic harvesting prediction of tomato-picking robots and contribute to improvement of harvesting efficiency and success rates.
Full article
(This article belongs to the Special Issue Key Technology Research and Applications of Agricultural Inspection Robots Based on Machine Vision and Artificial Intelligence)
Open AccessArticle
QTL Mapping and Fine Mapping of a Major Quantitative Trait Locus (qBS11) Conferring Resistance to Rice Brown Spot
by
Qiuyun Lin, Yujie Zhou, Yuehui Lin, Zhenyu Xie and Wei Hu
Agriculture 2025, 15(23), 2417; https://doi.org/10.3390/agriculture15232417 - 24 Nov 2025
Abstract
Rice brown spot (BS) disease, caused by Bipolaris oryzae, is a significant threat to rice production worldwide. In this study, a major quantitative trait locus (QTL), qBS11, associated with resistance to BS in rice, was identified and fine-mapped. A recombinant inbred
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Rice brown spot (BS) disease, caused by Bipolaris oryzae, is a significant threat to rice production worldwide. In this study, a major quantitative trait locus (QTL), qBS11, associated with resistance to BS in rice, was identified and fine-mapped. A recombinant inbred line (RIL) population from a cross between the susceptible variety Zhenshan97 and the resistant variety C309 was used for QTL mapping. Using composite interval mapping (CIM) and bulked segregant analysis sequencing (BSA-seq), qBS11 was narrowed to a 244.6 kb interval on chromosome 11, explaining up to 47.7% of the phenotypic variance. Fine mapping identified several potential candidate genes, including LOC_Os11g41170 and LOC_Os11g41210, encoding disease resistance proteins. The resistance exhibited by qBS11 was found to be partially dominant, with heterozygotes showing medium resistance. High broad-sense heritability (89.2%) confirmed the dominance of genetic factors in BS resistance. Additionally, regulatory region variations in the candidate genes suggest a gene dosage effect, which may explain the partial dominance observed for qBS11. This study provides valuable insights into the genetic basis of BS resistance and offers a foundation for breeding BS-resistant rice varieties through molecular marker-assisted selection (MAS). The findings also pave the way for future functional studies of the identified genes.
Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
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Open AccessArticle
Integrated Transcriptomic and Metabolomic Analyses Implicate Key Genes and Metabolic Pathways in Maize Lodging Resistance
by
Chunlei Xue, Haiyan Wu, Xuting Zhang, Fengcheng Sun, Sainan Zhang, Zhonghao Yu, Qi Dong, Yanan Liu, Hailong Zhang, Qing Ma and Liming Wang
Agriculture 2025, 15(23), 2416; https://doi.org/10.3390/agriculture15232416 - 24 Nov 2025
Abstract
Maize stalk lodging causes substantial yield losses worldwide. Although stalk strength is a genetically determined trait, its molecular mechanisms—particularly the dynamic changes during key developmental stages—remain inadequately characterized due to limitations of single-omics approaches. This study employed an integrated transcriptomic and metabolomic analysis
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Maize stalk lodging causes substantial yield losses worldwide. Although stalk strength is a genetically determined trait, its molecular mechanisms—particularly the dynamic changes during key developmental stages—remain inadequately characterized due to limitations of single-omics approaches. This study employed an integrated transcriptomic and metabolomic analysis strategy to compare stalk tissues from three maize genotypes with contrasting lodging resistance: the highly resistant inbred line PHB1M, the susceptible inbred line Chang 7-2, and their recombinant inbred line 23NWZ561 (abbreviated as P, C, and Z, respectively). Dynamic sampling of all three genotypes was conducted at both grain-filling and maturity stages, with simultaneous measurement of physiological traits related to stalk strength. Phenotypic analysis revealed that the resistant genotype PHB1M exhibited superior rind penetration strength, cell wall composition (cellulose, hemicellulose, and lignin) content, and vascular bundle development. Multi-omics analysis indicated that the molecular basis of lodging resistance is primarily established during the maturity stage. The transcriptomic and metabolomic profiles of the recombinant inbred line Z shifted from clustering with the susceptible parent C at the grain-filling stage to grouping with the resistant parent P at maturity. Key pathways including phenylpropanoid biosynthesis were significantly enriched specifically at maturity, accompanied by upregulation of related genes (PAL, HCT, CCR) and accumulation of metabolites such as lignin precursors in PHB1M. Integrated analysis identified a core co-expression network within the phenylpropanoid pathway comprising three genes and three metabolites. This study systematically demonstrates that lodging resistance in maize is regulated by transcriptional and metabolic reprogramming during late stalk developmental stages, particularly at maturity, where enhanced activation of the phenylpropanoid biosynthesis pathway plays a central role. These findings provide valuable candidate genes and metabolic markers for breeding lodging-resistant maize varieties.
Full article
(This article belongs to the Special Issue Crop Yield Improvement in Genetic and Biology Breeding)
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Open AccessArticle
Time-Dependent Stress Response to Force-Feeding Is Associated with Dynamic Gut Microbiota Changes in Mule Ducks
by
Ziyuan Du, Zhihao Zhu, Yuhang Chen, Xuanci Yu, Hongyu Jia, Ang Li, Xinzhu Chen and Caiyun Huang
Agriculture 2025, 15(23), 2415; https://doi.org/10.3390/agriculture15232415 - 24 Nov 2025
Abstract
This study aimed to investigate the temporal dynamics of physiological and gut microbial responses in Mule ducks (M-D) during force-feeding (F-F), with the goal of identifying potential regulatory targets to reduce feeding stress. Male M-Ds were subjected to either F-F or ad libitum
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This study aimed to investigate the temporal dynamics of physiological and gut microbial responses in Mule ducks (M-D) during force-feeding (F-F), with the goal of identifying potential regulatory targets to reduce feeding stress. Male M-Ds were subjected to either F-F or ad libitum feeding. We conducted longitudinal analysis at 72, 78, and 84 days of age to assess growth performance, serum biochemical profiles, and intestinal inflammatory markers, while assessing gut microbiota composition through 16S rDNA sequencing. The F-F group exhibited superior growth performance. Initial physiological responses at day 72 included significantly reduced serum corticotropin-releasing hormone (CRH) and jejunal tumor necrosis factor-alpha (TNF−α). Conversely, F-F induced a persistent and profound alteration in the gut microbiome by day 84, characterized by reduced alpha diversity and a significant enrichment of the genus Limosilactobacillus. Correlation analysis identified Limosilactobacillus as a keystone taxon, strongly associated with intestinal metabolites. Our findings demonstrate that M-Ds undergo time-dependent metabolic and immunological adaptations in response to F-F stress, which correlates with distinct alterations in gut microbiota composition, particularly the enrichment of Limosilactobacillus. These findings provide a theoretical basis for developing microbiota-targeted strategies to alleviate F-F stress in foie gras production.
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(This article belongs to the Section Farm Animal Production)
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Open AccessArticle
Agroecological Adoption Pathways in Europe: Drivers, Barriers, and Policy Implication Opportunities in the Czech Republic, Hungary, and Portugal
by
Apolka Ujj, Kinga Nagyné Pércsi, Fernanda Ramos-Diaz, Jana Budimir-Marjanović, Lanka Horstink, Rita Queiroga-Bento, Chisenga Emmanuel Mukosha, Jan Moudrý, Koponicsné Györke Diána and Paulina Jancsovszka
Agriculture 2025, 15(23), 2414; https://doi.org/10.3390/agriculture15232414 - 24 Nov 2025
Abstract
Agroecology offers a transformative pathway toward sustainable food systems by integrating ecological, economic, and social dimensions of farming. While its conceptual and policy foundations are increasingly recognized in European Union (EU) strategies, the practical adoption of agroecological principles at the farm level remains
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Agroecology offers a transformative pathway toward sustainable food systems by integrating ecological, economic, and social dimensions of farming. While its conceptual and policy foundations are increasingly recognized in European Union (EU) strategies, the practical adoption of agroecological principles at the farm level remains uneven, particularly in socio-economically peripheral Member States. This article investigates the enabling and constraining factors of agroecological uptake in three EU countries—Czech Republic, Hungary, and Portugal, using a mixed qualitative approach that combined literature review, policy mapping, and 42 in-depth farmer interviews conducted in 2020–2021. Data were analyzed through a shared coding framework, iterative team discussions, and a standardized comparative matrix to ensure cross-country validity. The results reveal shared barriers, including limited institutional coordination, subsidy dependency, and structural land inequalities, alongside country-specific dynamics such as farmer-to-farmer learning in Portugal, family-farm identity in Czechia, and trust-based advisory relations in Hungary. The findings underscore that systemic constraints, rather than conceptual gaps, impede agroecological transitions, and highlight the need for context-sensitive policy instruments, advisory reforms, and training programs aligned with agroecological principles. The paper contributes to the literature by providing empirical insight into farmer attitudes and practices in Central and Southern Europe and by offering actionable recommendations for designing policies and training.
Full article
(This article belongs to the Special Issue Agroecological Transition in Sustainable Food Systems)
Open AccessArticle
Study on the Impact of Grazing Density on Seasonal Pasture NPP in the Northern Slope of the Tianshan Mountains in Xinjiang: A Case Study of Hutubi County
by
Qun Luo, Hang Zhou, Chenhui Zhu, Xiaolin Wang, Tianyu Jiao, Changhui Ma, Fei Zhang and Xu Ma
Agriculture 2025, 15(23), 2413; https://doi.org/10.3390/agriculture15232413 - 23 Nov 2025
Abstract
Grazing pressure (GP) was a key factor influencing net primary productivity (NPP) in pasturelands and was characterized by two indicators: grazing intensity (GI) and grazing density (GD). However, current research has not yet clarified whether the mechanisms linking GP to NPP varied by
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Grazing pressure (GP) was a key factor influencing net primary productivity (NPP) in pasturelands and was characterized by two indicators: grazing intensity (GI) and grazing density (GD). However, current research has not yet clarified whether the mechanisms linking GP to NPP varied by season, or whether seasonal thresholds of grazing pressure existed. This study employed the Carnegie–Ames–Stanford Approach (CASA) model to estimate NPP over eight time periods between 2010 and 2024 for three seasonal pastures (spring–autumn, summer, and winter) in the study area. Estimation accuracy was evaluated by comparing our NPP estimates with existing NPP products. Trends in NPP and their significance were analyzed using the Sen–MK method, followed by further examination of spatiotemporal variations in NPP across the three seasonal pastures. Subsequently, by comparing two grazing pressure indicators (GI and GD), we identified the optimal metric to represent GP and, on this basis, analyzed the spatiotemporal variations and threshold dynamics of pasture NPP across three seasons under the influence of GP. Results indicated that the CASA model achieved R2 > 0.90 for multi-year NPP estimation, with RMSE ranging from 27 to 45 g C m−2 y−1. Spring–autumn and winter pastures exhibited pronounced slope changes and intense spatiotemporal NPP variations, whereas summer pastures showed insignificant slope changes and stable spatiotemporal NPP patterns. Of the two GP indicators, the GD metric developed herein more effectively characterized grazing pressure across the study area. Across the three seasonal pastures, a consistent negative feedback between GD and NPP was evident; however, its strength differed markedly, with spring–autumn and winter pastures exhibiting greater NPP sensitivity to GD. The GD thresholds for spring–autumn, summer, and winter pastures in the study area were approximately 900, 700, and 5000 sheep km−2, respectively. Exceeding these thresholds led to degradation, while falling below them promoted recovery. The study revealed a threshold-mediated negative feedback between GD and NPP across seasonal pastures, quantified season-specific upper bounds of carrying capacity, and provided an evidence base for zoned rest/rotational grazing and GD regulation along the northern slope of the Tianshan Mountains.
Full article
(This article belongs to the Topic Advances in Smart Agriculture with Remote Sensing as the Core and Its Applications in Crops Field)
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Open AccessArticle
Organic Fertilization Enhances Microbial-Mediated Dissolved Organic Matter Composition and Transformation in Paddy Soil
by
Long Chen, Huajun Fang, Shulan Cheng, Hui Wang, Yifan Guo, Fangying Shi, Bingqian Liu and Haiguang Pu
Agriculture 2025, 15(23), 2412; https://doi.org/10.3390/agriculture15232412 - 22 Nov 2025
Abstract
Dissolved organic matter (DOM) is a crucial carbon source for soil microorganisms and plays a vital role in nutrient cycling and carbon (C) sequestration in soils. However, the extent to which soil microbes mediate DOM transformation at the molecular level, and whether this
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Dissolved organic matter (DOM) is a crucial carbon source for soil microorganisms and plays a vital role in nutrient cycling and carbon (C) sequestration in soils. However, the extent to which soil microbes mediate DOM transformation at the molecular level, and whether this is regulated by different organic fertilization, remains unclear. Here, we designed a field experiment to investigate the transformations of DOM under three types of organic fertilization (straw, biochar, and manure) using Fourier transform ion cyclotron resonance mass spectrometry and metagenomic analysis. Compared to the control, manure fertilization increased the molecular chemodiversity of DOM by 33.2%, with recalcitrant compounds (e.g., highly unsaturated phenolic compounds and lignins) increasing by 47.2%. In contrast, labile compounds (e.g., aliphatics) decreased by 73.5%. Compared to straw treatment, manure application significantly increased the average conversion rate of dissolved organic matter (DOM). This process was accompanied by a significant increase in the Shannon index of the soil microbial community (p < 0.05) and upregulation of ABC transporter-encoding genes (e.g., livK, livM). DOM composition directly governed transformation potential (p < 0.01), whereas functional genes enhanced transformation indirectly by modulating DOM composition. This study elucidates microbial-mediated DOM transformation mechanisms under varying organic fertilization practices, providing a scientific basis for optimizing soil organic matter management in paddy ecosystems.
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(This article belongs to the Topic Ammonium Biology: From Molecular Response to Fertilization)
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Open AccessArticle
Comprehensive Quality Analysis of Common Vetch (Vicia sativa L.) Varieties Using Image Processing Techniques and Artificial Intelligence
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Necati Çetin, Onur Okumuş, Satı Uzun, Mahmut Kaplan, Ahmad Jahanbakhshi and Gniewko Niedbała
Agriculture 2025, 15(23), 2411; https://doi.org/10.3390/agriculture15232411 - 22 Nov 2025
Abstract
Common vetch (Vicia sativa L.) is a cool-season annual legume cultivated for grain and forage, valued for its high nutrient content, broad edaphoclimatic adaptability, and suitability for crop rotations. Physical seed attributes are critical for variety classification, quality evaluation, and breeding selection.
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Common vetch (Vicia sativa L.) is a cool-season annual legume cultivated for grain and forage, valued for its high nutrient content, broad edaphoclimatic adaptability, and suitability for crop rotations. Physical seed attributes are critical for variety classification, quality evaluation, and breeding selection. This study aimed to characterize the nutritional composition, mineral contents, and physical attributes of nine common vetch varieties and to assess the feasibility of binary variety classification using supervised machine learning (ML). Proximate analyses (e.g., crude protein, tannin), macro/micro minerals, and morpho-physical seed descriptors were determined. Multivariate and discriminant analyses were conducted. Binary classifiers were developed with a multilayer perceptron (MLP) and random forest (RF) under stratified 10-fold cross-validation. The highest values were observed for crude protein (22.66%, Alper), ADF (11.36%, Alınoğlu), NDF (16.47%, Alperen), and tannin (3.12%, Alınoğlu). For mineral profiles, Alper, Ankara Moru, and Doruk emerged as prominent varieties. In pairwise discrimination, Ankara Moru vs. Ayaz achieved 89% (MLP) and 90% (RF) accuracy, followed by Ankara Moru vs. Özveren with 88% (MLP) and 90.50% (RF). These results demonstrate that MLP and RF can classify common vetch varieties from physical attributes with high reliability. Integrating compositional, mineral, and morpho-physical data with supervised learning provides an objective, low-cost pathway for variety identification. The approach has direct implications for quality assessment, planting system design, and breeding. Future work should expand datasets, incorporate color-rich/hyperspectral cues, and compare feature-based models with domain-adapted deep learning on larger, multi-site collections.
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(This article belongs to the Topic Digital Agriculture, Smart Farming and Crop Monitoring)
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Open AccessArticle
How Do Spectral Scales and Machine Learning Affect SPAD Monitoring at Different Growth Stages of Winter Wheat?
by
Xueqing Zhu, Jun Li, Yali Sheng, Weiqiang Wang, Haoran Wang, Hui Yang, Ying Nian, Jikai Liu and Xinwei Li
Agriculture 2025, 15(23), 2410; https://doi.org/10.3390/agriculture15232410 - 22 Nov 2025
Abstract
Chlorophyll serves as a crucial indicator for crop growth monitoring and reflects the health status of crops. Hyperspectral remote sensing technology, leveraging its advantages of repeated observations and high-throughput analysis, provides an effective approach for non-destructive chlorophyll monitoring. However, determining the optimal spectral
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Chlorophyll serves as a crucial indicator for crop growth monitoring and reflects the health status of crops. Hyperspectral remote sensing technology, leveraging its advantages of repeated observations and high-throughput analysis, provides an effective approach for non-destructive chlorophyll monitoring. However, determining the optimal spectral scale remains the primary bottleneck constraining the widespread application of hyperspectral remote sensing in crop chlorophyll estimation: excessively fine spectral scale readily introduces redundant information, leading to dramatically increased data dimensions and reduced computational efficiency; conversely, overly coarse spectral scale risks losing critical spectral features such as absorption peaks and reflection troughs, thereby compromising model accuracy. Therefore, establishing an appropriate spectral scale that effectively preserves spectral feature information while maintaining computational efficiency is crucial for enhancing the accuracy and practicality of chlorophyll remote sensing estimation. To address this, this study proposes a three-dimensional analytical framework integrating “spectral scale—machine learning algorithm—crop growth stage” to systematically solve the scale optimization problem. Ground-truth measurements and hyperspectral data from five growth stages of winter wheat in Fengyang County, Anhui Province, were collected. Spectral bands sensitive to chlorophyll were analyzed, and four modeling methods—Ridge Regression (RR), K-Nearest Neighbors (KNN), Random Forest (RF), and Support Vector Regression (SVR)—were employed to integrate data from different spectral scales with respective bandwidths of 2, 3, 5, 7, 10, 20, and 50 nanometers (nm). The results evaluated the response characteristics of raw band reflectance to chlorophyll values and its impact on machine learning-based chlorophyll estimation across different spectral scales. Results indicate: (1) Canopy spectra significantly correlated with winter wheat chlorophyll primarily reside in the red and red-edge bands; (2) For single-scale analysis, larger spectral scales (10, 20 nm) enhance monitoring accuracy compared to 1 nm high-resolution data, while medium and small scales (5, 7 nm) may degrade accuracy due to redundant noise introduction. (3) Integrating growth stages, spectral scales, and machine learning revealed optimal monitoring accuracy during the jointing and heading stages using 1–5 nm spectral scales combined with the KNN algorithm. For the booting, flowering, and grain filling stages, the highest accuracy was achieved using 20–50 nm spectral scales combined with either the KNN or RF algorithm. The results indicate that high-precision chlorophyll inversion for winter wheat does not rely on a single fixed model or scale, but rather on the dynamic adaptation of the “scale-model-growth stage” triad. The proposed systematic framework not only provides a theoretical basis for chlorophyll monitoring using multi-platform remote sensing data, but also offers methodological support for future crop-sensing sensor design and data processing strategy optimization.
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(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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Open AccessArticle
Removal of Neonicotinoid Residues from Beeswax Using an Eco-Friendly Oxalic Acid Treatment: A Sustainable Solution for Apicultural Decontamination
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Karen Yáñez, Ramón Arias, Daniel Ramírez, Fabián Guerrero and Mario Toledo
Agriculture 2025, 15(23), 2409; https://doi.org/10.3390/agriculture15232409 - 22 Nov 2025
Abstract
Beeswax is widely used in apiculture and can accumulate neonicotinoid residues due to the intensive use of systemic pesticides in agriculture. These contaminants pose potential risks to honeybee health and may indirectly affect the quality and safety of hive products such as honey,
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Beeswax is widely used in apiculture and can accumulate neonicotinoid residues due to the intensive use of systemic pesticides in agriculture. These contaminants pose potential risks to honeybee health and may indirectly affect the quality and safety of hive products such as honey, pollen, and royal jelly. This study evaluates several decontamination methods for neonicotinoid removal from contaminated beeswax, including modern techniques (microwaves, ultrasonic baths, and magnetic stirring with heating) and conventional approaches based on heat, agitation, and water—either pure or acidified. Among these, the traditional method that uses an aqueous oxalic acid solution proved highly effective, removing over 99% of neonicotinoid residues after two treatment cycles, even at wax quantities up to 200 g. The treatment also improved the colour and physical properties of the wax and was well tolerated by bees, according to a qualitative acceptance test. The simplicity, low cost, and absence of hazardous by-products make this method suitable for scale-up and adoption in real apicultural practices. These findings support the development of accessible and sustainable strategies for the decontamination of wax matrices that may otherwise act as long-term reservoirs of pesticide residues in the food chain.
Full article
(This article belongs to the Special Issue Pesticide Ecotoxicology and Application Technology to Reduce Contamination)
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Open AccessArticle
Analysis of Causal Relationships Between Climate Perceptions and Ecological Production Among Tea Farmers in the Wuyi Mountains
by
Han Zhang, Li Ma, Jiaming Liu, Jiaji Xing, Yilei Hou and Yali Wen
Agriculture 2025, 15(23), 2408; https://doi.org/10.3390/agriculture15232408 - 22 Nov 2025
Abstract
Climate change adaptation in ecologically sensitive agriculture remains underexplored, especially regarding whether farmers’ climate perceptions translate into ecological production behaviors (EPBs). Using survey data from 730 tea farmers in China’s Wuyi Mountains National Park, this study examines how general and extreme climate change
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Climate change adaptation in ecologically sensitive agriculture remains underexplored, especially regarding whether farmers’ climate perceptions translate into ecological production behaviors (EPBs). Using survey data from 730 tea farmers in China’s Wuyi Mountains National Park, this study examines how general and extreme climate change perceptions relate to EPB adoption. Employing Ordered Probit models and Karlson-Holm-Breen (KHB) mediation analysis, we estimate perception–behavior associations and test indirect effects through information-seeking and policy participation, alongside moderation by ecosystem service cognition and ecological production benefit cognition. The results indicate that both general and extreme climate perceptions are positively associated with EPB adoption (β = 0.406 and 0.626, p < 0.01), with extreme perceptions showing significantly stronger effects. Climate perceptions influence EPB adoption across all dimensions (green production, ecological management, and market-based practices). Information-seeking and policy participation function as complementary mediating pathways (combined indirect effects = 0.101 and 0.117), linking climate perceptions to ecological actions. Moreover, higher ecosystem service cognition and ecological production benefit cognition strengthen the perception–behavior relationships across multiple EPB dimensions. Overall, the findings suggest that climate change perceptions are an important driver of farmers’ ecological production choices in high-ecological-value contexts. Interpreted alongside existing adaptation strategies, EPB may enhance resilience by leveraging ecosystem functions while aligning with market incentives for ecological products. These results underscore the value of policies that improve access to ecological training and market information and support demonstration programs that facilitate experiential learning.
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(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
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Open AccessReview
Strategies for Protecting Cereals and Other Utility Plants Against Cold and Freezing Conditions—A Mini-Review
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Julia Stachurska and Anna Maksymowicz
Agriculture 2025, 15(23), 2407; https://doi.org/10.3390/agriculture15232407 - 21 Nov 2025
Abstract
Low-temperature (LT) stresses (cold and frost) are major abiotic factors limiting plant growth and productivity. LT induces numerous physiological and biochemical changes in plants, changes hormonal balance and photosynthetic efficiency. Stress induced by LT often leads to yield losses in crops. While plants
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Low-temperature (LT) stresses (cold and frost) are major abiotic factors limiting plant growth and productivity. LT induces numerous physiological and biochemical changes in plants, changes hormonal balance and photosynthetic efficiency. Stress induced by LT often leads to yield losses in crops. While plants like maize and cucumber are highly sensitive to cold, winter cereals such as wheat and rye suffer mainly from severe frosts. Ongoing climate change and temperature fluctuations further increase the risk of LT-induced damage. To counteract the problems connected with LT stress, multiple strategies have been developed to enhance plant tolerance. Agrotechnical practices and biochemical treatments involving the application of phytohormones or osmoprotectants are designed to improve plant tolerance to LT. Beneficial plant–microbe interactions also contribute to alleviating LT stress. In addition, genetic engineering offers powerful tools for creating new cultivars that are more tolerant to LT. The CRISPR/Cas system, in particular, enables precise modifications and represents a promising tool for advancing sustainable agriculture. Integrated methods of protection are crucial for securing food supplies, especially under conditions of a changing climate. This mini-review summarises strategies for protecting plants against LT stress, with special attention paid to crop plants.
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(This article belongs to the Special Issue Physiological and Biochemical Responses to Abiotic Stress in Cereal and Pseudocereal Crops)
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Open AccessReview
Mass Trapping as a Sustainable Approach for Scarabaeidae Pest Management in Crops and Grasslands
by
Sergeja Adamič Zamljen, Tanja Bohinc and Stanislav Trdan
Agriculture 2025, 15(23), 2406; https://doi.org/10.3390/agriculture15232406 - 21 Nov 2025
Abstract
Soil-dwelling beetles, including native and invasive species such as Popilia japonica Newman (Coleoptera: Scarabaeidae), are persistent and damaging agricultural pests worldwide. Mass trapping, using pheromone-, light-, or food-based lures to attract and remove adults, is being developed as an environmentally sustainable alternative within
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Soil-dwelling beetles, including native and invasive species such as Popilia japonica Newman (Coleoptera: Scarabaeidae), are persistent and damaging agricultural pests worldwide. Mass trapping, using pheromone-, light-, or food-based lures to attract and remove adults, is being developed as an environmentally sustainable alternative within integrated pest management (IPM). Scarab beetles respond positively to attractant-based traps, and large-scale programs against P. japonica in North America provide valuable insights for global applications. The efficacy of mass trapping depends on species biology, trap density, environmental conditions and landscape structure. Capturing adults does not always immediately reduce larval populations, as underground stages persist in soil for multiple years. Light traps are effective but often attract many non-target insects, whereas pheromone traps are more selective but require careful optimization of lure composition, release rate and placement. To achieve reliable suppression, mass trapping should be integrated with complementary strategies such as biological control agents (Beauveria spp., Metarhizium spp.), crop rotation, tolerant crop varieties and soil management. Future research should focus on refining lure design, optimizing deployment, testing predictive models and evaluating multi-bait systems. Overall, mass trapping represents a promising and environmentally sustainable tool that, when incorporated into integrated approaches, can enhance the management of soil-dwelling scarab beetles across diverse agroecosystems worldwide.
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(This article belongs to the Section Crop Protection, Diseases, Pests and Weeds)
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Open AccessArticle
Rapid Identification and Accurate Localization of Walnut Trunks Based on TIoU-YOLOv8n-Pruned
by
Chenchen Ye, Yan Xu, Jianping Zhou, Chengcheng Li, Fubao Fang and Zhengyang Jin
Agriculture 2025, 15(23), 2405; https://doi.org/10.3390/agriculture15232405 - 21 Nov 2025
Abstract
Visual perception has become a prerequisite for the operation of automated walnut vibration harvesting robots under complex orchard conditions. This study proposes an effective trunk target detection algorithm, TIoU-YOLOv8n-Pruned, based on YOLOv8n. First, to enhance the accuracy of walnut trunk prediction boxes matching
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Visual perception has become a prerequisite for the operation of automated walnut vibration harvesting robots under complex orchard conditions. This study proposes an effective trunk target detection algorithm, TIoU-YOLOv8n-Pruned, based on YOLOv8n. First, to enhance the accuracy of walnut trunk prediction boxes matching true boxes at high overlap levels, a TIoU loss function is introduced. Second, to mitigate vibration effect caused by the PTO axis of the tractor, vibration trajectory fitting and coordinate correction are performed by capturing multiple images per second. To meet the frame rate requirements for coordinate correction, channel pruning removes 55% of the model’s non-essential channels. Experimental results show that the number of parameters and GFLOPs of TIoU-YOLOv8-Pruned are 950,000 and 3.6 GFLOPs, respectively, while its accuracy and mAP@0.5:0.95 reach 94.1% and 57.2%, outperforming YOLOv5n, YOLOv8n, YOLOv11n, FasterNet-YOLOv8n, Ghost-YOLOv8n, ShuffleNetv2-YOLOv8n, MobileNetV3-YOLOv8n, EfficientNet-YOLOv8n, GhostNetV3-YOLOv8n and MobileNetV4-YOLOv8n. After trajectory fitting and coordinate correction, it significantly reduces vibration-induced errors and enhances localization accuracy. Overall, the TIoU-YOLOv8n-Pruned model demonstrates applicability for trunk identification and localization in walnut orchard mechanical shaking harvesting, offering theoretical guidance for developing automated shaking harvesting equipment.
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(This article belongs to the Special Issue Advanced Image Collection, Processing, and Analysis in Crop and Livestock Management)
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Open AccessArticle
Design and Test of Straw Crushing and Spreading Device Based on Straw Mulching No-Tillage Planter
by
Shouyin Hou, Hanfei Zhang, Yunze Shi, Bo Jin, Hao Huang, Naiyu Shi, Wenyi Ji and Cheng Zhou
Agriculture 2025, 15(23), 2404; https://doi.org/10.3390/agriculture15232404 - 21 Nov 2025
Abstract
To address issues such as slow soil temperature recovery and delayed sowing periods caused by straw mulching in the cold regions of northern Heilongjiang Province, this study designed a straw crushing and scattering device compatible with the 2BMFJ series no-till planters, aiming to
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To address issues such as slow soil temperature recovery and delayed sowing periods caused by straw mulching in the cold regions of northern Heilongjiang Province, this study designed a straw crushing and scattering device compatible with the 2BMFJ series no-till planters, aiming to achieve moderate straw fragmentation and uniform distribution. By establishing mathematical models for the straw pick-up, crushing, and scattering processes, key parameters affecting the device’s performance were determined. Utilizing the discrete model of EDEM 2018 software virtual simulation experiments were conducted based on response surface methodology. The test factors included the blade angle of the crushing long blade, the edge thickness of the crushing long blade, the weight of the crushing long blade, and the rotational speed of the crushing long blade. The performance evaluation indicators were the straw pick-up rate, straw crushing rate, power consumption, and inter-row straw coverage consistency. The optimal parameter combination was identified to be a blade angle of 25°, an edge thickness of 1.25 mm, a weight ranging from 0.35 to 0.41 kg, and a rotational speed between 1400 and 1750 r/min, resulting in a straw pick-up rate of 83%, a straw crushing rate of 84%, power consumption of 6.8 KW, and a straw cleaning consistency between rows of 75%. Field test results indicated that the straw pick-up rate reached 87.2%, the straw crushing rate achieved 81.5%, power consumption was 7.7 kW, and the straw cleaning consistency between rows attained 79.3%. The deviations from simulation results were within acceptable limits. This equipment can effectively complete straw crushing and scattering operations, thereby creating favorable seedbed conditions.
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(This article belongs to the Section Agricultural Technology)
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Open AccessArticle
The Impact of Digital–Green Synergy on Agricultural New Quality Productive Forces in China
by
Jingjing Zhang, Huajing Li and Hongqiong Li
Agriculture 2025, 15(23), 2403; https://doi.org/10.3390/agriculture15232403 - 21 Nov 2025
Abstract
The synergy between agricultural digitalization and greening is an inherent requirement for high-quality agricultural development and is a vital pathway for cultivating agricultural new quality productive forces (ANQPFs). Based on 2012–2023 provincial-level data from 30 Chinese provinces, this study constructs comprehensive evaluation index
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The synergy between agricultural digitalization and greening is an inherent requirement for high-quality agricultural development and is a vital pathway for cultivating agricultural new quality productive forces (ANQPFs). Based on 2012–2023 provincial-level data from 30 Chinese provinces, this study constructs comprehensive evaluation index systems for agricultural digitalization, greening, and ANQPFs. A coupling coordination model is applied to measure the degree of digital–green synergy, and a two-way fixed effects model is employed to test its impact on ANQPFs, along with the underlying mechanisms and regional heterogeneity. The results indicate that digital–green synergy significantly enhances ANQPFs. A 1% increase in the synergy index improves ANQPFs by 29.6%, primarily through industrial structure optimization, technological innovation stimulation, and resource allocation efficiency improvement. The positive effect is most prominent in the central region, after Digital Village Strategy implementation, and in major grain-producing areas. This study innovatively integrates digitalization and greening into the analytical framework of agricultural productivity, expanding the theoretical understanding of how synergistic transformation drives high-quality agricultural development. Regarding policy, governments should strengthen coordination between digital and green policies, promote the integration and innovation of related technologies, and foster an enabling environment that supports the formation and evolution of new quality productive forces in agriculture.
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(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
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Open AccessArticle
A Gated Ridge Regression-Based Multimodal Spectral Fusion Approach for Predicting Soil Organic Matter
by
Guofang Wang, Juanling Wang, Mingjing Huang, Jiancheng Zhang, Xuefang Huang, Xiuquan Zhang and Wuping Zhang
Agriculture 2025, 15(23), 2402; https://doi.org/10.3390/agriculture15232402 - 21 Nov 2025
Abstract
The fusion of Raman and visible–near-infrared (VIS–NIR) spectroscopy provides a promising pathway for rapid and non-destructive soil analysis. However, conventional fusion strategies often fail to properly balance modality discrepancies and complementary information. To address this limitation, this study develops an adaptive Gated Ridge
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The fusion of Raman and visible–near-infrared (VIS–NIR) spectroscopy provides a promising pathway for rapid and non-destructive soil analysis. However, conventional fusion strategies often fail to properly balance modality discrepancies and complementary information. To address this limitation, this study develops an adaptive Gated Ridge Regression fusion model (Fusion_GatedRidge) for predicting soil organic matter (SOM). A total of 246 soil samples collected from a dryland agricultural region in Shanxi Province were analyzed using laboratory Raman and VIS–NIR spectroscopy. After standard preprocessing, three baseline fusion frameworks—EarlyFusion_Ridge, AE_LatentFusion, and WeightedLate_Fusion—were implemented for comparison with the proposed gated fusion method. Under fivefold cross-validation, Fusion_GatedRidge achieved the best performance, with an R2 of 0.83, RMSE of 2.01 g·kg−1, and RPD of 2.39. Compared with single-modality models, R2 increased by up to 18.6% and RMSE decreased by up to 23.0%. The gating mechanism dynamically adjusted the contributions of Raman and VIS–NIR features, leading to more stable predictions with residuals largely within −2 to 2 g·kg−1. Overall, the proposed model demonstrates that adaptive modality weighting enhances the exploitation of complementary spectral information and significantly improves SOM prediction accuracy. These findings offer a concise and effective multimodal fusion framework for laboratory-based soil nutrient assessment.
Full article
(This article belongs to the Section Agricultural Soils)
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Open AccessArticle
Drought-Induced Antioxidant and Biochemical Responses in Castanea sativa Cultivars: A Mediterranean Case Study
by
Tiago Marques, Andrea Ferreira-Pinto, Pedro Fevereiro, Teresa Pinto and José Laranjo
Agriculture 2025, 15(22), 2401; https://doi.org/10.3390/agriculture15222401 - 20 Nov 2025
Abstract
Chestnut (Castanea sativa Mill.) is a key crop in Mediterranean regions increasingly threatened by recurrent drought stress. To investigate cultivar-specific tolerance mechanisms, we evaluated four Portuguese cultivars (Longal, Judia, Martaínha, and ColUTAD®) across four orchards with contrasting water regimes. Physiological
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Chestnut (Castanea sativa Mill.) is a key crop in Mediterranean regions increasingly threatened by recurrent drought stress. To investigate cultivar-specific tolerance mechanisms, we evaluated four Portuguese cultivars (Longal, Judia, Martaínha, and ColUTAD®) across four orchards with contrasting water regimes. Physiological (midday stem water potential—Ψwmid, soluble sugars, electrolyte leakage and proline) and biochemical traits (phenolics, flavonoids, catalase, peroxidase, ascorbate peroxidase and ferric reducing antioxidant power) were quantified under a natural drought gradient. Results revealed that environmental factors had a stronger influence than genetic background. Longal showed robust osmotic adjustment with high proline and soluble sugar levels, alongside stable starch reserves; Judia relied on inducible antioxidant activity, particularly peroxidase and ascorbate peroxidase; and Martaínha exhibited intermediate plasticity, whereas ColUTAD® was consistently stress-sensitive, with weaker defences and greater membrane damage. Clustering analysis confirmed that location effects outweighed cultivar differences, separating orchards into conservative strategies (better water balance, higher starch, stronger peroxidase activity) and stress-adaptive strategies (enhanced enzymatic antioxidants). Overall, resilience in chestnut is not determined by a single trait but by a synergistic network of osmotic regulation, membrane protection, and antioxidant activity. Traits such as proline accumulation, starch stability, and inducible enzyme activation emerged as reliable biochemical indicators of tolerance. These findings provide a physiological basis for selecting climate-resilient cultivars and designing site-specific management strategies, thereby supporting the sustainability of chestnut production under Mediterranean climate change scenarios.
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(This article belongs to the Section Crop Production)
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