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Genes, Volume 5, Issue 4

2014 December - 12 articles

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Articles (12)

  • Article
  • Open Access
20 Citations
9,352 Views
17 Pages

Next-Generation Sequencing of Genomic DNA Fragments Bound to a Transcription Factor in Vitro Reveals Its Regulatory Potential

  • Yukio Kurihara,
  • Yuko Makita,
  • Mika Kawashima,
  • Hidefumi Hamasaki,
  • Yoshiharu Y. Yamamoto and
  • Minami Matsui

19 December 2014

Several transcription factors (TFs) coordinate to regulate expression of specific genes at the transcriptional level. In Arabidopsis thaliana it is estimated that approximately 10% of all genes encode TFs or TF-like proteins. It is important to ident...

  • Review
  • Open Access
127 Citations
39,007 Views
31 Pages

Somatic Mosaicism in the Human Genome

  • Donald Freed,
  • Eric L. Stevens and
  • Jonathan Pevsner

11 December 2014

Somatic mosaicism refers to the occurrence of two genetically distinct populations of cells within an individual, derived from a postzygotic mutation. In contrast to inherited mutations, somatic mosaic mutations may affect only a portion of the body...

(This article belongs to the Special Issue Grand Celebration: 10th Anniversary of the Human Genome Project)
  • Article
  • Open Access
10 Citations
9,535 Views
20 Pages

Altered Actions of Memantine and NMDA-Induced Currents in a New Grid2-Deleted Mouse Line

  • Ayako Kumagai,
  • Akira Fujita,
  • Tomoki Yokoyama,
  • Yuki Nonobe,
  • Yasuhiro Hasaba,
  • Tsutomu Sasaki,
  • Yumi Itoh,
  • Minako Koura,
  • Osamu Suzuki and
  • Hiroshi Takemori
  • + 14 authors

11 December 2014

Memantine is a non-competitive antagonist of the N-methyl-D-aspartate (NMDA) receptor, and is an approved drug for the treatment of moderate-to-severe Alzheimer’s disease. We identified a mouse strain with a naturally occurring mutation and an ataxic...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
120 Citations
11,723 Views
14 Pages

Long Non-Coding RNA NEAT1 Associates with SRp40 to Temporally Regulate PPARγ2 Splicing during Adipogenesis in 3T3-L1 Cells

  • Denise R. Cooper,
  • Gay Carter,
  • Pengfei Li,
  • Rehka Patel,
  • James E. Watson and
  • Niketa A. Patel

27 November 2014

Long non-coding (lnc) RNAs serve a multitude of functions in cells. NEAT1 RNA is a highly abundant 4 kb lncRNA in nuclei, and coincides with paraspeckles, nuclear domains that control sequestration of paraspeckle proteins. We examined NEAT1 RNA level...

(This article belongs to the Special Issue miRNA Regulation)
  • Review
  • Open Access
11 Citations
11,448 Views
18 Pages

11 November 2014

The locations of transcription and translation of mRNA in eukaryotic cells are spatially separated by the nuclear envelope (NE). Plenty of nuclear pore complexes (NPCs) embedded in the NE function as the major gateway for the export of transcribed mR...

(This article belongs to the Special Issue Mechanisms of mRNA Nuclear Export)
  • Review
  • Open Access
21 Citations
10,863 Views
17 Pages

Delivery of a Clinical Genomics Service

  • William G. Newman and
  • Graeme C. Black

6 November 2014

Over the past five years, next generation sequencing has revolutionised the discovery of genes responsible for rare inherited diseases previously resistant to traditional discovery techniques. This review considers how this new technology is being in...

(This article belongs to the Special Issue Grand Celebration: 10th Anniversary of the Human Genome Project)
  • Review
  • Open Access
36 Citations
12,509 Views
14 Pages

Regulation of Pancreatic Beta Cell Stimulus-Secretion Coupling by microRNAs

  • Jonathan L. S. Esguerra,
  • Inês G. Mollet,
  • Vishal A. Salunkhe,
  • Anna Wendt and
  • Lena Eliasson

6 November 2014

Increased blood glucose after a meal is countered by the subsequent increased release of the hypoglycemic hormone insulin from the pancreatic beta cells. The cascade of molecular events encompassing the initial sensing and transport of glucose into t...

(This article belongs to the Special Issue miRNA Regulation)
  • Article
  • Open Access
14 Citations
7,833 Views
19 Pages

Sumoylation is Required for the Cytoplasmic Accumulation of a Subset of mRNAs

  • Hui Zhang,
  • Kohila Mahadevan and
  • Alexander F. Palazzo

20 October 2014

In order to discover novel proteins that promote the nuclear export of newly synthesized mRNAs in mammalian cells, we carried out a limited RNAi screen for proteins required for the proper cytoplasmic distribution of a model intronless mRNA. From thi...

(This article belongs to the Special Issue Mechanisms of mRNA Nuclear Export)
  • Article
  • Open Access
51 Citations
15,421 Views
25 Pages

30 September 2014

The High-performance Integrated Virtual Environment (HIVE) is a high-throughput cloud-based infrastructure developed for the storage and analysis of genomic and associated biological data. HIVE consists of a web-accessible interface for authorized us...

(This article belongs to the Section Technologies and Resources for Genetics)
  • Review
  • Open Access
21 Citations
11,382 Views
39 Pages

Mouse ENU Mutagenesis to Understand Immunity to Infection: Methods, Selected Examples, and Perspectives

  • Grégory Caignard,
  • Megan M. Eva,
  • Rebekah Van Bruggen,
  • Robert Eveleigh,
  • Guillaume Bourque,
  • Danielle Malo,
  • Philippe Gros and
  • Silvia M. Vidal

29 September 2014

Infectious diseases are responsible for over 25% of deaths globally, but many more individuals are exposed to deadly pathogens. The outcome of infection results from a set of diverse factors including pathogen virulence factors, the environment, and...

(This article belongs to the Special Issue Grand Celebration: 10th Anniversary of the Human Genome Project)
  • Review
  • Open Access
124 Citations
17,536 Views
31 Pages

29 September 2014

Overweight and obesity are major problems in today’s society, driving the prevalence of diabetes and its related complications. It is important to understand the molecular mechanisms underlying the chronic complications in diabetes in order to develo...

(This article belongs to the Special Issue miRNA Regulation)
  • Review
  • Open Access
135 Citations
14,396 Views
22 Pages

The Role of microRNAs in Mitochondria: Small Players Acting Wide

  • Filipe V. Duarte,
  • Carlos M. Palmeira and
  • Anabela P. Rolo

26 September 2014

MicroRNAs (miRNAs) are short, single-stranded, non-coding RNA molecules that act as post-transcriptional gene regulators. They can inhibit target protein-coding genes, through repressing messenger RNA (mRNA) translation or promoting their degradation...

(This article belongs to the Special Issue miRNA Regulation)
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Genes - ISSN 2073-4425