12 pages, 4470 KiB  
Article
Nanoparticle Coatings on Glass Surfaces to Prevent Pseudomonas fluorescens AR 11 Biofilm Formation
by Daniele Marra 1, Irene Perna 1, Giulio Pota 1, Giuseppe Vitiello 1,2, Alessandro Pezzella 1, Giuseppe Toscano 1, Giuseppina Luciani 1 and Sergio Caserta 1,3,*
1 DICMaPI, Università di Napoli Federico II, Piazzale V. Tecchio 80, 80125 Napoli, Italy
2 CSGI, Center for Colloid and Surface Science, Via della Lastruccia 3, 50019 Florence, Italy
3 CEINGE, Advanced Biotechnologies, 80145 Naples, Italy
Microorganisms 2023, 11(3), 621; https://doi.org/10.3390/microorganisms11030621 - 28 Feb 2023
Cited by 9 | Viewed by 2822
Abstract
Microbial colonization of surfaces is a sanitary and industrial issue for many applications, leading to product contamination and human infections. When microorganisms closely interact with a surface, they start to produce an exo-polysaccaridic matrix to adhere to and protect themselves from adverse environmental [...] Read more.
Microbial colonization of surfaces is a sanitary and industrial issue for many applications, leading to product contamination and human infections. When microorganisms closely interact with a surface, they start to produce an exo-polysaccaridic matrix to adhere to and protect themselves from adverse environmental conditions. This type of structure is called a biofilm. The aim of our work is to investigate novel technologies able to prevent biofilm formation by surface coatings. We coated glass surfaces with melanin-ZnO2, melanin-TiO2, and TiO2 hybrid nanoparticles. The functionalization was performed using cold plasma to activate glass-substrate-coated surfaces, that were characterized by performing water and soybean oil wetting tests. A quantitative characterization of the antibiofilm properties was done using Pseudomonas fluorescens AR 11 as a model organism. Biofilm morphologies were observed using confocal laser scanning microscopy and image analysis techniques were used to obtain quantitative morphological parameters. The results highlight the efficacy of the proposed surface coating to prevent biofilm formation. Melanin-TiO2 proved to be the most efficient among the particles investigated. Our results can be a valuable support for future implementation of the technique proposed here in an extended range of applications that may include further testing on other strains and other support materials. Full article
(This article belongs to the Special Issue Feature Papers in Microbial Biofilm Formation)
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11 pages, 2880 KiB  
Article
Field Use of Protective Bacteriophages against Pectinolytic Bacteria of Potato
by Karel Petrzik 1, Josef Vacek 2, Martin Kmoch 3,*, Denisa Binderová 3, Sára Brázdová 1, Ondřej Lenz 1 and Rudolf Ševčík 4
1 Institute of Molecular Biology, Biology Centre of the Czech Academy of Sciences, Branišovská 1160/31, 370 05 České Budějovice, Czech Republic
2 Department of Growing Technologies, Potato Research Institute Havlíčkův Brod, Dobrovského 2366, 580 01 Havlíčkův Brod, Czech Republic
3 Laboratory of Virology, Department of Genetic Resources, Potato Research Institute Havlíčkův Brod, Dobrovského 2366, 580 01 Havlíčkův Brod, Czech Republic
4 Institute of Food Preservation, Faculty of Food and Biochemical Technology, University of Chemistry and Technology (VŠCHT), Technická 3, 166 28 Prague, Czech Republic
Microorganisms 2023, 11(3), 620; https://doi.org/10.3390/microorganisms11030620 - 28 Feb 2023
Cited by 4 | Viewed by 2117
Abstract
The pectinolytic Dickeya solani bacterium is an important pathogen found in potatoes. We conducted laboratory and field experiments mimicking severe and mild Dickeya spp. infection and investigated the application of a mixture of two lytic bacteriophages before and after bacterial infection to protect [...] Read more.
The pectinolytic Dickeya solani bacterium is an important pathogen found in potatoes. We conducted laboratory and field experiments mimicking severe and mild Dickeya spp. infection and investigated the application of a mixture of two lytic bacteriophages before and after bacterial infection to protect the plants. Application of the phage solution to tuber disks and wounded tubers did not completely eliminate the infection but reduced the development of soft rot symptoms by 59.5–91.4%, depending on the phage concentration. In the field trial, plants treated with bacteriophages after severe Dickeya infection had 5–33% greater leaf cover and 4–16% greater tuber yield compared to untreated plants. When simulating a mild infection, leaf cover was 11–42% greater, and tuber yield was 25–31% greater compared to untreated plants. We conclude that the phage mixture has the potential to protect potatoes ecologically from D. solani. Full article
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3 pages, 187 KiB  
Editorial
Special Issue “Biotechnological Application of Photosynthetic Bacteria”
by Hitoshi Miyasaka
Department of Applied Life Science, Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto 860-0082, Japan
Microorganisms 2023, 11(3), 619; https://doi.org/10.3390/microorganisms11030619 - 28 Feb 2023
Viewed by 1932
Abstract
This Special Issue aims to contribute to the current knowledge in the field and promote the practical application of photosynthetic bacteria (PSB) biotechnology [...] Full article
(This article belongs to the Special Issue Biotechnological Application of Photosynthetic Bacteria)
24 pages, 2313 KiB  
Review
Animal Models for Studying Congenital Transmission of Hepatitis E Virus
by Kush Kumar Yadav and Scott P. Kenney *
Center for Food Animal Health, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 43210, USA
Microorganisms 2023, 11(3), 618; https://doi.org/10.3390/microorganisms11030618 - 28 Feb 2023
Cited by 8 | Viewed by 4069
Abstract
One of the most intriguing issues in the hepatitis E virus (HEV) field is the significant increase in mortality rates of the mother and fetus when infection occurs in the second and third trimesters of gestation. A virus that is normally self-limiting and [...] Read more.
One of the most intriguing issues in the hepatitis E virus (HEV) field is the significant increase in mortality rates of the mother and fetus when infection occurs in the second and third trimesters of gestation. A virus that is normally self-limiting and has a mortality rate of less than one percent in otherwise healthy individuals steeply rises by up to 30% in these pregnant populations. Answering this pivotal question has not been a simple task. HEV, in general, has been a difficult pathogen to understand in the laboratory setting. A historical lack of ability to efficiently propagate the virus in tissue culture models has led to many molecular aspects of the viral lifecycle being understudied. Although great strides have been made in recent years to adapt viruses to cell culture, this field remains behind other viruses that are much easier to replicate efficiently in vitro. Some of the greatest discoveries regarding HEV have come from using animal models for which naturally occurring strains of HEV have been identified, including pigs and chickens, but key limitations have made animal models imperfect for studying all aspects of human HEV infections. In addition to the difficulties working with HEV, pregnancy is a very complicated biological process with an elaborate interplay between many different host systems, including hormones, cardiovascular, kidneys, respiratory, gastrointestinal, epithelial, liver, metabolic, immune, and others. Significant differences between the timing and interplay of these systems are notable between species, and making direct comparisons between animals and humans can be difficult at times. No simple answer exists as to how HEV enhances mortality in pregnant populations. One of the best approaches to studying HEV in pregnancy is likely a combinatorial approach that uses the best combination of emerging in vitro and in vivo systems while accounting for the deficiencies that are present in each model. This review describes many of the current HEV animal model systems and the strengths and weaknesses of each as they apply to HEV pregnancy-associated mortality. We consider factors that are critical to analyzing HEV infection within the host and how, despite no perfect animal model for human pregnancy mortality existing, recent developments in HEV models, both in vitro and in vivo, are advancing our overall understanding of HEV in the pregnant host. Full article
(This article belongs to the Special Issue Emerging Pathogens Causing Acute Hepatitis)
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16 pages, 656 KiB  
Article
Investigating Catheter-Related Infections in Southern Benin Hospitals: Identification, Susceptibility, and Resistance Genes of Involved Bacterial Strains
by Victorien Tamègnon Dougnon *, Kevin Sintondji, Charles Hornel Koudokpon, Morènikè Houéto, Alidehou Jerrold Agbankpé, Phénix Assogba, Alida Oussou, Anderson Gnamy, Boris Legba, Abdoulaye Idrissou and Honoré Sourou Bankole
Research Unit in Applied Microbiology and Pharmacology of Natural Substances, Research Laboratory in Applied Biology, Polytechnic School of Abomey-Calavi, University of Abomey-Calavi, Cotonou BP 526, Benin
Microorganisms 2023, 11(3), 617; https://doi.org/10.3390/microorganisms11030617 - 28 Feb 2023
Cited by 9 | Viewed by 3206
Abstract
The use of catheters and bladder catheters in hospitals can increase the risk of bacterial infections. This study aimed to identify the bacterial strains involved in catheter-related infections (CRI) in southern Benin hospitals. The study included 407 samples, including 95 catheter tip samples [...] Read more.
The use of catheters and bladder catheters in hospitals can increase the risk of bacterial infections. This study aimed to identify the bacterial strains involved in catheter-related infections (CRI) in southern Benin hospitals. The study included 407 samples, including 95 catheter tip samples and 312 urine samples collected from bladder catheters from patients on the first day and 48 h after admission. The catheter tip samples were analyzed using traditional bacterial isolation and identification methods, while the urine samples were analyzed using VITEK-2. Antibiotic sensitivity was tested using the Kirby Bauer method, and virulence and resistance genes were detected through standard PCR. The results showed a predominance of Escherichia coli (53.5%), Klebsiella pneumoniae (23.3%), and Enterobacter aerogenes (7.0%) among Gram-negative bacilli, and coagulase-negative Staphylococcus as the most identified cocci. Bacterial susceptibility to antibiotics showed variable levels of resistance, with blaTEM being detected in 42.9% of identified bacterial species, followed by blaSHV (26.2%) and blaCTX-M-15 (16.7%). The blaNDM gene was only found in three identified bacterial strains, while vanA and vanB genes were detected in 3.2% of strains with a prevalence of 55% for the mecA gene. A prevalence of 18.8% for fimH was noted for the virulence genes. In conclusion, this study highlights the importance of following proper hygiene and aseptic practices during catheterization to effectively prevent CRIs. These findings should be used to improve interventions in hospitals and reduce healthcare-associated infections in developing countries. Full article
(This article belongs to the Section Medical Microbiology)
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10 pages, 1258 KiB  
Article
New Lactones Produced by Streptomyces sp. SN5431 and Their Antifungal Activity against Bipolaris maydis
by Yinan Wang 1, Di Yang 1 and Zhiguo Yu 1,2,*
1 College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
2 Engineering & Technological Research Center of Biopesticide for Liaoning Province, Shenyang 110866, China
Microorganisms 2023, 11(3), 616; https://doi.org/10.3390/microorganisms11030616 - 28 Feb 2023
Cited by 7 | Viewed by 1932
Abstract
Bipolaris maydis causes southern corn leaf blight and inflicts huge losses on maize production. In order to search for new natural products from insect gut bacteria to control plant fungal disease, 86 actinomycetes were isolated from more than 50 insect guts, in which [...] Read more.
Bipolaris maydis causes southern corn leaf blight and inflicts huge losses on maize production. In order to search for new natural products from insect gut bacteria to control plant fungal disease, 86 actinomycetes were isolated from more than 50 insect guts, in which crude extract of strain SN5431 showed significant inhibition of the mycelial growth of B. maydis. The strain was identified and named as Streptomyces sp. SN5431. Six compounds were obtained from the crude extract of strain SN5431, which includes five new γ-butyrolactones named as tiuslactone A–E (15), and one new long chain ester named as tiusester (6). Their structures were determined using NMR and HRESIMS data and then combined with the spectroscopic data of known similar compounds. Tiuslactone B (2) showed powerful antifungal activity against B. maydis. These results indicated metabolites of insect gut bacteria have the potential to be the leading compounds for the control of corn leaf blight. Full article
(This article belongs to the Special Issue Antimicrobial Activities of Natural Products)
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11 pages, 2011 KiB  
Communication
Detection of Oxacillin/Cefoxitin Resistance in Staphylococcus aureus Present in Recurrent Tonsillitis
by Aline Cristine Magalhães Costa Messias 1, Aline Rodrigues Gama 1, Letícia Suriano de Almeida Prado 2, Paulo Alex Neves da Silva 2, Arlindo Rodrigues Galvão Filho 3, Clarimar José Coelho 3, Melissa Ameloti Gomes Avelino 2, José Daniel Gonçalves Vieira 1 and Lilian Carla Carneiro 1,*
1 Institute of Tropical Pathology and Public Health, Federal University of Goiás, 235 Street, Goiânia 74605-020, GO, Brazil
2 Faculty of Medicine, Federal University of Goiás, 235 Street, Goiânia 74690-900, GO, Brazil
3 Engineering School, Pontifical Catholic University of Goiás, Avenue Universitária, Goiânia 74175-120, GO, Brazil
Microorganisms 2023, 11(3), 615; https://doi.org/10.3390/microorganisms11030615 - 28 Feb 2023
Cited by 2 | Viewed by 3132
Abstract
Background: Recurrent tonsillitis is one of the most common diseases in childhood, caused many times by ß-lactam-resistant S. aureus. The objective of this study was to investigate an alternative method to identify resistance to oxacillin/cefoxitin in S. aureus from hospitalized children with [...] Read more.
Background: Recurrent tonsillitis is one of the most common diseases in childhood, caused many times by ß-lactam-resistant S. aureus. The objective of this study was to investigate an alternative method to identify resistance to oxacillin/cefoxitin in S. aureus from hospitalized children with recurrent tonsillitis. Methods: The samples of S. aureus came from patients with recurrent tonsillitis and were used in 16S rRNA sequencing and an antibiogram test for identification and verifying resistance, after which HSI methodology were applied for separation of S. aureus resistances. Results: The S. aureus isolated showed sensitivity to oxacillin/cefoxitin and the diagnostic images show a visual description of the resistance different groups formed, that may be related to sensitivity and resistance to oxacillin/cefoxitin, characterizing the MRSA S. aureus. Conclusions: Samples that showed phenotypic resistance to oxacillin/cefoxitin were clearly separated from samples that did not show this resistance. A PLS-DA model predicted the presence of resistance to oxacillin/cefoxitin in S. aureus samples and it was possible to observe the pixels classified as MRSA. The HSI was able to successfully discriminate samples in replicas that were sensitive and resistant, based on the calibration model it received. Full article
(This article belongs to the Special Issue Detection and Analysis of Clinical Microbial Infections)
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19 pages, 1370 KiB  
Review
Bacterial Pigments and Their Multifaceted Roles in Contemporary Biotechnology and Pharmacological Applications
by Himani Agarwal 1, Sneh Bajpai 1, Arti Mishra 2, Isha Kohli 1, Ajit Varma 1, Mireille Fouillaud 3, Laurent Dufossé 3,* and Naveen Chandra Joshi 1,*
1 Amity Institute of Microbial Technology, Amity University, Noida 201313, India
2 Department of Botany, Hansraj College, University of Delhi, Delhi 110021, India
3 Chemistry and Biotechnology of Natural Products, CHEMBIOPRO, Université de La Réunion, ESIROI Agroalimentaire, 15 Avenue René Cassin, CS 92003, CEDEX 9, F-97744 Saint-Denis, France
Microorganisms 2023, 11(3), 614; https://doi.org/10.3390/microorganisms11030614 - 28 Feb 2023
Cited by 53 | Viewed by 14113
Abstract
Synthetic dyes and colourants have been the mainstay of the pigment industry for decades. Researchers are eager to find a more environment friendly and non-toxic substitute because these synthetic dyes have a negative impact on the environment and people’s health. Microbial pigments might [...] Read more.
Synthetic dyes and colourants have been the mainstay of the pigment industry for decades. Researchers are eager to find a more environment friendly and non-toxic substitute because these synthetic dyes have a negative impact on the environment and people’s health. Microbial pigments might be an alternative to synthetic pigments. Microbial pigments are categorized as secondary metabolites and are mainly produced due to impaired metabolism under stressful conditions. These pigments have vibrant shades and possess nutritional and therapeutic properties compared to synthetic pigment. Microbial pigments are now widely used within the pharmaceuticals, food, paints, and textile industries. The pharmaceutical industries currently use bacterial pigments as a medicine alternative for cancer and many other bacterial infections. Their growing popularity is a result of their low cost, biodegradable, non-carcinogenic, and environmentally beneficial attributes. This audit article has made an effort to take an in-depth look into the existing uses of bacterial pigments in the food and pharmaceutical industries and project their potential future applications. Full article
(This article belongs to the Special Issue Going Further with Microbial Secondary Metabolites and Biotechnology)
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7 pages, 744 KiB  
Communication
Leukocyte Response to Campylobacter Intra-Abdominal Infection in One Day Old Leghorn Chickens
by Kenneth J. Genovese *, Haiqi He, Christina L. Swaggerty, J. Allen Byrd and Michael H. Kogut
Food and Feed Safety Research Unit, Southern Plains Agricultural Research Center, U.S. Department of Agriculture, Agricultural Research Service, College Station, TX 77845, USA
Microorganisms 2023, 11(3), 613; https://doi.org/10.3390/microorganisms11030613 - 28 Feb 2023
Cited by 1 | Viewed by 1585
Abstract
Using a previously characterized and described abdominal model to define the avian immune response to Salmonella intra-abdominal challenge in chickens, we have adapted this technique for the study of chickens’ immune response to a Campylobacter intra-abdominal challenge. The intra-abdominal Campylobacter infection model facilitates [...] Read more.
Using a previously characterized and described abdominal model to define the avian immune response to Salmonella intra-abdominal challenge in chickens, we have adapted this technique for the study of chickens’ immune response to a Campylobacter intra-abdominal challenge. The intra-abdominal Campylobacter infection model facilitates the characterization of peripheral blood leukocyte dynamics and abdominal cell infiltrates. Day-of-hatch Leghorn chickens were injected intra-abdominally (IA) with Campylobacter jejuni [(CJ)1 × 108 colony-forming units (CFUs)]. Changes in peripheral blood leukocyte numbers and abdominal cell infiltrates were monitored at 0, 4, 8, and 24 h post-injection. Peripheral blood leukocyte numbers were also determined for 2 h post-injection. For mortality studies, birds were injected intra-abdominally with 1 × 108 CFUs CJ and mortalities were recorded for 72 h post-injection. In the peripheral blood of CJ-injected chicks, total white blood cell (WBC) numbers began increasing by 2 h post-injection, peaking at 4 h post-injection with the predominant cell type being polymorphonuclear leukocytes (heterophils). Total WBCs declined after 8 h and this decline continued at 24 h, with total WBC numbers approaching control values. The injection of CJ into the abdominal cavity caused a rapid rise in abdominal cell infiltrates with the predominant infiltrating leukocytes being heterophils. Peak abdominal heterophil infiltrates were observed at 8 h post-injection, declining only slightly by 24 h post-injection. Mortality in the CJ challenge groups reached 37%. Mortality in the Salmonella enteritidis positive control groups were greater than 50%. The data suggest that Campylobacter infection does stimulate the innate immune response in chickens when administered IA, however, the immune response and infection is not characterized with the high levels of mortality observed with a Salmonella infection. These data provide a basis for a more definitive characterization of chickens’ immune response to Campylobacter and a model to evaluate intervention strategies to prevent the infection and colonization of poultry. Full article
(This article belongs to the Section Gut Microbiota)
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18 pages, 742 KiB  
Review
Angiotensin-Converting Enzyme 2 Expression and Severity of SARS-CoV-2 Infection
by Sarah Alabsi 1, Atharva Dhole 2, Sameh Hozayen 3 and Scott A. Chapman 4,*
1 University of Minnesota School of Medicine, 420 Delaware St. SE, Minneapolis, MN 55455, USA
2 Department of Internal Medicine, University of Minnesota, 420 Delaware St. SE, Minneapolis, MN 55455, USA
3 Hospital Medicine Division, Department of Medicine, University of Minnesota, Mayo Building 420 Delaware St. SE, 6 floor, D650, Minneapolis, MN 55455, USA
4 Department of Experimental and Clinical Pharmacology, University of Minnesota College of Pharmacy, 7-115E Weaver Densford Hall, 308 Harvard Street SE, Minneapolis, MN 55455, USA
Microorganisms 2023, 11(3), 612; https://doi.org/10.3390/microorganisms11030612 - 28 Feb 2023
Cited by 9 | Viewed by 3492
Abstract
Angiotensin-converting enzyme 2 (ACE2), first discovered in 2000, serves as an important counterregulatory enzyme to the angiotensin II-mediated vasoconstrictive, pro-inflammatory, and pro-fibrotic actions of the renin–angiotensin system (RAS). Conversion of angiotensin II to the peptide angiotensin 1–7 (ANG 1–7) exerts protective vasodilatory, anti-inflammatory, [...] Read more.
Angiotensin-converting enzyme 2 (ACE2), first discovered in 2000, serves as an important counterregulatory enzyme to the angiotensin II-mediated vasoconstrictive, pro-inflammatory, and pro-fibrotic actions of the renin–angiotensin system (RAS). Conversion of angiotensin II to the peptide angiotensin 1–7 (ANG 1–7) exerts protective vasodilatory, anti-inflammatory, and anti-fibrotic actions through interaction with the MasR receptor. There are many important considerations when noting the role of ACE2 in the pathogenesis and sequelae of COVID-19 infection. ACE2, in the role of COVID-19 infection, was recognized early in 2020 at the beginning of the pandemic as a cell membrane-bound and soluble binding site for the viral spike protein facilitating entering into tissue cells expressing ACE2, such as the lungs, heart, gut, and kidneys. Mechanisms exist that alter the magnitude of circulating and membrane-bound ACE2 (e.g., SARS-CoV-2 infection, viral variants, patient characteristics, chronic disease states, and the degree of cell surface expression of ACE2) and the influence these mechanisms have on the severity of disease and associated complications (e.g., respiratory failure, systemic inflammatory response syndrome, acute myocarditis, acute kidney injury). Several medications alter the ACE2 receptor expression, but whether these medications can influence the course of the disease and improve outcomes is unclear. In this review, we will discuss what is known about the interrelation of SARS-CoV-2, ACE2 and the factors that may contribute to the variability of its expression and potential contributors to the severity of COVID-19 infection. Full article
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11 pages, 1294 KiB  
Article
Thermophilin 13: In Silico Analysis Provides New Insight in Genes Involved in Bacteriocin Production
by Francesco Salini 1,2, Lucilla Iacumin 1,*, Giuseppe Comi 1 and Leon M. T. Dicks 2,*
1 Department of Agriculture, Food, Environmental and Animal Science, University of Udine, 33100 Udine, Italy
2 Department of Microbiology, Stellenbosch University, Stellenbosch 7600, South Africa
Microorganisms 2023, 11(3), 611; https://doi.org/10.3390/microorganisms11030611 - 28 Feb 2023
Cited by 7 | Viewed by 2410
Abstract
Bacteriocins are a large family of ribosomally synthesised proteinaceous toxins that are produced by bacteria and archaea and have antimicrobial activity against closely related species to the producer strain. Antimicrobial proteinaceous compounds are associated with a wide range of applications, including as a [...] Read more.
Bacteriocins are a large family of ribosomally synthesised proteinaceous toxins that are produced by bacteria and archaea and have antimicrobial activity against closely related species to the producer strain. Antimicrobial proteinaceous compounds are associated with a wide range of applications, including as a pathogen inhibitor in food and medical use. Among the several lactic acid bacteria (LAB) commonly used in fresh and fermented food preservation, Streptococcus thermophilus is well known for its importance as a starter culture for yoghurt and cheese. Previous studies described the bacteriocin thermophilin 13 exclusively in S. thermophilus SFi13 and the genes encoding its production as an operon consisting of two genes (thmA and thmB). However, the majority of bacteriocins possess a complex production system, which involves several genes encoding dedicated proteins with relatively specific functions. Up to now, far too little attention has been paid to the genes involved in the synthesis, regulation and expression of thermophilin 13. The aim of the present study, using in silico gene mining, was to investigate the presence of a regulation system involved in thermophilin 13 production. Results revealed the dedicated putative bacteriocin gene cluster (PBGC), which shows high similarity with the class IIb bacteriocins genes. This newly revealed PBGC, which was also found within various strains of Streptococcus thermophilus, provides a new perspective and insights into understanding the mechanisms implicated in the production of thermophilin 13. Full article
(This article belongs to the Section Food Microbiology)
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19 pages, 7214 KiB  
Article
Influence of Probiotic Feed Supplement on Nosema spp. Infection Level and the Gut Microbiota of Adult Honeybees (Apis mellifera L.)
by Ivana Tlak Gajger 1,*, Srebrenka Nejedli 2 and Luka Cvetnić 3
1 Department for Biology and Pathology of Fish and Bees, Faculty of Veterinary Medicine, University of Zagreb, 10 000 Zagreb, Croatia
2 Department for Anatomy, Histology and Embryology, Faculty of Veterinary Medicine, University of Zagreb, 10 000 Zagreb, Croatia
3 Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10 000 Zagreb, Croatia
Microorganisms 2023, 11(3), 610; https://doi.org/10.3390/microorganisms11030610 - 28 Feb 2023
Cited by 10 | Viewed by 3855
Abstract
Honeybees’ gut microbiota can provide new valuable access into the pathogenesis-related factors included in infections. Hence, we researched the presence and comparison of gut microbiota groups in control and Nosema spp.-infected honeybee colonies through high-throughput sequencing of the 16S rRNA. As the newest [...] Read more.
Honeybees’ gut microbiota can provide new valuable access into the pathogenesis-related factors included in infections. Hence, we researched the presence and comparison of gut microbiota groups in control and Nosema spp.-infected honeybee colonies through high-throughput sequencing of the 16S rRNA. As the newest approach in apiary management, we hypothesize that the EM® probiotic for bees could have an important role in therapeutic and immunomodulatory effects on honeybee colonies. The aim of this study was to estimate its impact on the gut microbiota composition of adult honeybees. The major genera were detected, where Lactobacillus was the most abundant genus, followed by Gilliamela, Snodgrassella, and Bifidobacterium. Inoculation with Nosema spp. spores made the relative proportions of Bifidobacterium lower, which was ameliorated by EM® for bees’ application. In addition, EM® for bee applied treatments suppressed the increase in the number of Nosema spp. spores. This result points out that continuous EM® for bees treatment shall change bees’ gut microbiome composition and mitigate the influence of Nosema spp. infection. Snodgrassella alvi was a major member of the honeybee gut microbiota and may be significantly increased by long-term treatment with EM® for bees. Toward these results, it is possible that EM® for bees treatment will protect honeybees from herbicide glyphosate negative effects in agricultural fields by improving microbiome and immune functions. Full article
(This article belongs to the Special Issue Special Abilities of Microbes and Their Application in Agro-Biology)
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13 pages, 2610 KiB  
Article
Impact of Environmental Stresses on the Antibacterial Activity of Graphene Oxide (GO) Nanoparticles against P. putida Biofilms
by Hussam Fallatah 1,2,3,*, Tim Overton 2, Hanene Ali-Boucetta 3,* and Konstantinos Gkatzionis 4
1 Waste Management and Recycling Institute, King Abdulaziz City for Science and Technology (KACST), Riyadh 12354, Saudi Arabia
2 School of Chemical, Engineering, University of Birmingham, Birmingham B15 2TT, UK
3 Nanomedicine, Drug Delivery & Nanotoxicology (NDDN) Laboratory, School of Pharmacy, University of Birmingham, Birmingham B15 2TT, UK
4 Department of Food Science and Nutrition, University of the Aegean, Metropolite Ioakeim 2, 81400 Myrina, Lemnos, Greece
Microorganisms 2023, 11(3), 609; https://doi.org/10.3390/microorganisms11030609 - 28 Feb 2023
Cited by 2 | Viewed by 2046
Abstract
As the production of graphene-based nanomaterials such as GO is increasing, it is expected that a large amount of GO waste will be generated. The environment (i.e., soil and aquatic systems) will be amongst the final repositories of these wastes which means important [...] Read more.
As the production of graphene-based nanomaterials such as GO is increasing, it is expected that a large amount of GO waste will be generated. The environment (i.e., soil and aquatic systems) will be amongst the final repositories of these wastes which means important natural microbial communities in such environments will be at risk of GO exposure. However, little is known about how these communities respond to environmental stresses in synergy with the presence of GO. In this study, the effect of three different stress conditions: temperature (5, 25 and 40 °C); pH (5 to 9) and osmotic stress (51, 219 and 320 mM NaCl) in addition to GO treatment was investigated on the viability and physiology of biofilms and planktonic cells of soil bacterium P. putida. It was found that planktonic cells were more resistant to GO alone compared to biofilms. However, the cells were sensitive to GO when exposed to pH or osmotic stresses. Temperature was not found to influence the survival of biofilm with or without exposure to GO. However, low pH caused a reduction in colony-forming units (CFU) at pHs 5 and 6 for the pre-treated samples, while biofilms at pH 7–9 did not show any decrease. Interestingly, the post-treatment of planktonic cells or biofilms with GO showed a significant reduction in CFU at all pH ranges. The effect of higher osmotic stress in combination with GO resulted in a significant reduction in biofilms. These results show that the effect of stresses naturally occurring in the environment can be affected and changed when in combination with GO and can potentially affect the balance of natural biofilms. Full article
(This article belongs to the Special Issue Host–Biofilm Interactions 2.0)
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22 pages, 3900 KiB  
Review
The Role of Biofilms in the Pathogenesis of Animal Bacterial Infections
by Live L. Nesse 1,*, Ane Mohr Osland 2 and Lene K. Vestby 2
1 Department of Animal Health, Welfare and Food Safety, Norwegian Veterinary Institute, 1433 Ås, Norway
2 Department of Analysis and Diagnostics, Norwegian Veterinary Institute, 1433 Ås, Norway
Microorganisms 2023, 11(3), 608; https://doi.org/10.3390/microorganisms11030608 - 28 Feb 2023
Cited by 26 | Viewed by 6893
Abstract
Biofilms are bacterial aggregates embedded in a self-produced, protective matrix. The biofilm lifestyle offers resilience to external threats such as the immune system, antimicrobials, and other treatments. It is therefore not surprising that biofilms have been observed to be present in a number [...] Read more.
Biofilms are bacterial aggregates embedded in a self-produced, protective matrix. The biofilm lifestyle offers resilience to external threats such as the immune system, antimicrobials, and other treatments. It is therefore not surprising that biofilms have been observed to be present in a number of bacterial infections. This review describes biofilm-associated bacterial infections in most body systems of husbandry animals, including fish, as well as in sport and companion animals. The biofilms have been observed in the auditory, cardiovascular, central nervous, digestive, integumentary, reproductive, respiratory, urinary, and visual system. A number of potential roles that biofilms can play in disease pathogenesis are also described. Biofilms can induce or regulate local inflammation. For some bacterial species, biofilms appear to facilitate intracellular invasion. Biofilms can also obstruct the healing process by acting as a physical barrier. The long-term protection of bacteria in biofilms can contribute to chronic subclinical infections, Furthermore, a biofilm already present may be used by other pathogens to avoid elimination by the immune system. This review shows the importance of acknowledging the role of biofilms in animal bacterial infections, as this influences both diagnostic procedures and treatment. Full article
(This article belongs to the Special Issue Latest Review Papers in Biofilm Research 2023)
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17 pages, 5859 KiB  
Article
Genomic Analysis of Haloarchaea from Diverse Environments, including Permian Halite, Reveals Diversity of Ultraviolet Radiation Survival and DNA Photolyase Gene Variants
by Sagorika Nag 1, Priya DasSarma 1,2,*, David J. Crowley 3, Rafael Hamawi 3, Samantha Tepper 3, Brian P. Anton 4, Daniel Guzmán 5 and Shiladitya DasSarma 1,2,6,*
1 Blue Marble Space Institute of Science, Seattle, WA 98104, USA
2 Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201, USA
3 Department of Biological and Physical Sciences, Assumption University, Worcester, MA 01609, USA
4 New England Biolabs, Ipswich, MA 01938, USA
5 Centro de Biotecnología, Faculty of Sciences and Technology, Universidad Mayor de San Simón, Cochabamba 4962, Bolivia
6 Institute of Marine and Environmental Technology, University of Maryland System, Baltimore, MD 21202, USA
Microorganisms 2023, 11(3), 607; https://doi.org/10.3390/microorganisms11030607 - 28 Feb 2023
Cited by 5 | Viewed by 3834
Abstract
Ultraviolet (UV) radiation responses of extremophilic and archaeal microorganisms are of interest from evolutionary, physiological, and astrobiological perspectives. Previous studies determined that the halophilic archaeon, Halobacterium sp. NRC-1, which survives in multiple extremes, is highly tolerant of UV radiation. Here, Halobacterium sp. NRC-1 [...] Read more.
Ultraviolet (UV) radiation responses of extremophilic and archaeal microorganisms are of interest from evolutionary, physiological, and astrobiological perspectives. Previous studies determined that the halophilic archaeon, Halobacterium sp. NRC-1, which survives in multiple extremes, is highly tolerant of UV radiation. Here, Halobacterium sp. NRC-1 UV tolerance was compared to taxonomically diverse Haloarchaea isolated from high-elevation salt flats, surface warm and cold hypersaline lakes, and subsurface Permian halite deposits. Haloterrigena/Natrinema spp. from subsurface halite deposits were the least tolerant after exposure to photoreactivating light. This finding was attributed to deviation of amino acid residues in key positions in the DNA photolyase enzyme or to the complete absence of the photolyase gene. Several Halobacterium, Halorubrum and Salarchaeum species from surface environments exposed to high solar irradiance were found to be the most UV tolerant, and Halorubrum lacusprofundi from lake sediment was of intermediate character. These results indicate that high UV tolerance is not a uniform character trait of Haloarchaea and is likely reflective of UV exposure experienced in their environment. This is the first report correlating natural UV tolerance to photolyase gene functionality among Haloarchaea and provides insights into their survival in ancient halite deposits and potentially on the surface of Mars. Full article
(This article belongs to the Special Issue Genomics of Extremophiles and Archaea)
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