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Sensors 2016, 16(7), 1044; doi:10.3390/s16071044

Node Detection and Internode Length Estimation of Tomato Seedlings Based on Image Analysis and Machine Learning

1
Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Midori-cho, Nishi-Tokyo, Tokyo 188-0002, Japan
2
PS Solutions Corp., 1-5-2 Higashi-Shimbashi, Minato-ku, Tokyo 105-7104, Japan
*
Author to whom correspondence should be addressed.
Academic Editor: Simon X. Yang
Received: 16 April 2016 / Revised: 27 June 2016 / Accepted: 1 July 2016 / Published: 7 July 2016
(This article belongs to the Special Issue Sensors for Agriculture)
View Full-Text   |   Download PDF [1125 KB, uploaded 7 July 2016]   |  

Abstract

Seedling vigor in tomatoes determines the quality and growth of fruits and total plant productivity. It is well known that the salient effects of environmental stresses appear on the internode length; the length between adjoining main stem node (henceforth called node). In this study, we develop a method for internode length estimation using image processing technology. The proposed method consists of three steps: node detection, node order estimation, and internode length estimation. This method has two main advantages: (i) as it uses machine learning approaches for node detection, it does not require adjustment of threshold values even though seedlings are imaged under varying timings and lighting conditions with complex backgrounds; and (ii) as it uses affinity propagation for node order estimation, it can be applied to seedlings with different numbers of nodes without prior provision of the node number as a parameter. Our node detection results show that the proposed method can detect 72% of the 358 nodes in time-series imaging of three seedlings (recall = 0.72, precision = 0.78). In particular, the application of a general object recognition approach, Bag of Visual Words (BoVWs), enabled the elimination of many false positives on leaves occurring in the image segmentation based on pixel color, significantly improving the precision. The internode length estimation results had a relative error of below 15.4%. These results demonstrate that our method has the ability to evaluate the vigor of tomato seedlings quickly and accurately. View Full-Text
Keywords: node detection; internode length estimation; image analysis; machine learning; BoVWs; affinity propagation node detection; internode length estimation; image analysis; machine learning; BoVWs; affinity propagation
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This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. (CC BY 4.0).

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Yamamoto, K.; Guo, W.; Ninomiya, S. Node Detection and Internode Length Estimation of Tomato Seedlings Based on Image Analysis and Machine Learning. Sensors 2016, 16, 1044.

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