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Int. J. Mol. Sci. 2013, 14(3), 5668-5685; doi:10.3390/ijms14035668
Published: 11 March 2013
Abstract: For different reasons, the amount of food loss for developing and developed countries is approximately equivalent. Altogether, these losses represent approximately 1/3 of the global food production. Significant amounts of pasteurised milk are lost due to bad smell and unpleasant taste. Currently, even under the best cold chain conditions, psychrotolerant spore-forming bacteria, some of which also harbour virulent factors, limit the shelf life of pasteurised milk. N2 gas-based flushing has recently been of interest for improving the quality of raw milk. Here, we evaluated the possibility of addressing bacterial growth in pasteurised milk during cold storage at 6 °C and 8 °C. Clearly, the treatments hindered bacterial growth, in a laboratory setting, when N2-treated milk were compared to the corresponding controls, which suggests that N2-flushing treatment constitutes a promising option to extend the shelf life of pasteurised milk.
The world today confronts simultaneously several challenges which more than ever require new strategies to develop sustainable food systems. In a world that faces on-going climate change, the risk of finite resources, and where the current state of food-borne diseases may be summarised in the following way “the challenges of 20 years ago persist while new ones continue to emerge” , all steps of food production, storage, and processing through distribution are being challenged.
The issue of whether the world’s current food production is sufficient is debatable. Some argue that the continuing population and consumption increase implies that the global food demand will need to increase by 70% to 100% . Others believe that global food production only suffers from serious deviations , but all parties have highlighted the tremendous waste from production to consumption for developing and developed countries. Roughly one-third of the edible parts of food produced for human consumption is lost or wasted . The wastage of milk at the consumption level is very high in industrialised countries. For British households, it is estimated that 38% of milk is discarded because of bad smell/taste and 37% because it has expired . In developing regions, wastage of milk occurs mainly during postharvest handling, storage, and distribution .
According to the FAO, approximately 80% of the milk consumed worldwide is obtained outside of the set standards; cold chain-based storage is generally not applicable or affordable. In developed countries, on the other hand, an effective cold chain that ensures food safety from production until processing has spoiling bacteria which cause losses to the dairy industry. Psychrotrophic bacteria, which are capable of growing below 7 °C and which are present in raw milk, belong to numerous genera. These bacteria are known for producing extra-cellular enzymes (proteases, lipases, phospholipases) many of which can withstand the classical heat treatments of milk . With some exceptions (such as B. cereus or Listeria strains), most of these bacteria are considered benign. However, recent observations have shown that raw milk bacteria, whether mesophiles or psychrotrophs from conventional or organic production systems, carry antibiotic resistance (AR) features at levels that raise the question of whether cold storage of milk is actually promoting AR amplification [7–9].
In general, unpasteurised milk is considered a public health threat. Heat treatments, such as pasteurisation, aim to preserve food materials from spoilage and disease-creating microorganisms. Pasteurisation of raw milk can be achieved by several combinations of time and temperature, with the most widely applied comprising a 15 second heat treatment at 72 °C (HTST: high temperature, short time method; ). The treatments target two important pathogenic non-spore forming bacterial species present in raw milk (Mycobacterium tuberculosis and Coxiella burnetti) among the most heat resistant, and they destroy yeasts and moulds, Gram-negative bacteria as well as many Gram-positive bacteria. Pasteurisation seems however not to be the ultimate tool to control milkborne pathogens considering the increasing number of incidences in which foodborne pathogens are detected in fluid milk and ready-to-eat dairy products . Although the standard for the bacteriological limit (expected to be below 100,000 cfu/mL prior to commingling with milk from another producer and not over 300,000 cfu/mL prior to pasteurisation, [12,13]) for raw milk in developed countries appears to be consensual, the limit for bacterial counts in pasteurised milk is expected to be below 20,000 cfu/mL in the United States (“Grade A” pasteurised milk) and should be below the range 5000 and 50,000 cfu/mL in Europe [12,13].
The shelf life of HTST pasteurised milk is estimated to range from 7 to 28 days . In the US, the shelf life of fluid milk is between 1 to 3 weeks , whereas in Brazil, for example, the range drops to 3–8 days, mainly due to poor cold chain conditions .
If Gram-negative bacteria are encountered in pasteurised milk, their presence is usually indicative of failed pasteurisation or post-pasteurisation contamination; nevertheless, under the best pasteurisation conditions, bacterial growth and the resulting spoilage constitutes the major limiting factor in extending the shelf life of conventional HTST pasteurised milk [6,16,17]. Gram-positive psychrotolerant bacterial species are mainly implicated; different genera enter the raw milk as spores, survive the pasteurisation steps and germinate. Due to the ability of these bacteria to grow while producing spoilage enzymes at refrigeration temperatures, the degradation of milk components causes off-flavours or curdling of the milk. Extensive studies in the US have shown that, for cold stored HTST pasteurised milk, Bacillus spp. dominates in the early stages of cold storage (<7 days), whereas Paenibacillus spp. becomes predominant in the later stages (>10 days) [16–18].
The application of modified/controlled atmospheres to improve food storage is ancient; one early application of elevated CO2 involved the preservation of meat carcasses on their way from New Zealand to Great Britain in the 1930s . Numerous studies have reported the inhibition of bacterial growth following the addition of carbon dioxide to raw milk [20–24]. However, the treatments also promote the acidification of milk or the modification of its sensory properties. Two studies investigated the use of nitrogen (N2), considered an inert gas, to inhibit bacterial growth and the spoilage potential present in raw milk [24,25]. Both studies investigated a “closed system” with no possibility of gas exchange between the milk flasks and the environment. Recently, we investigated the possibility of applying N2 gas to raw milk that was cold stored in bottles/tanks and kept in an “open system”. We observed that the treatments especially targeted phospholipases producers, including Bacillus cereus. Although not yet optimised, N2 gas flushed into raw milk constitutes an interesting perspective to improve raw milk quality at both laboratory and pilot plant scales [26–29].
To further investigate the applicability of N2 gas at the level of fluid milk, in the present study, we considered pasteurised milk that was stored and treated similarly to raw milk at laboratory scale and we examined the impact of the N2-treatments on bacterial growth.
2. Results and Discussion
2.1. Microbiological Analyses
2.1.1. Retail Pasteurised Milk
For both control and N2-flushed pasteurised milks maintained at 6 °C, the total counts (approximately 3.30 log cfu/mL at day 0, Figure 1A) remained the same until day 7. Then, a gradual increase in bacterial counts was observed for the control (C), contrary to the treated sample (N), for which only a moderate growth (approximately 0.5 log unit) was recorded over 14 days (Figure 1A). For the samples stored at 8 °C, at first, the bacterial growth was low for both conditions (Figure 1B). After 7 days in storage, at every sampling day, the counts from flushed milk (N) were at least 2.9 log units lower than for the control (C) (Figure 1B). Clearly, the N2 treatment impacted the rate of bacterial growth.
The fact that any temperature rise, even minor, favours bacterial growth in milk is well known . The comparison of the differences of counts in log-units between initial and final sampling points between C and N (3.2/C and 0.7/N, Figure 1A, and 5.4/C and 2.7/N, Figure 1B) showed that the hindrance of bacterial growth was best realised by combining storage at lower temperatures together with N2 flushing. At the level of pasteurised milk, additional studies are required to determine the limitations of N2-gas treatment efficiency imposed by the storage temperatures. As already observed for raw milk, N2-based treatments proved to still be efficient at 12 °C for up to 48 h . The factor within the initial microflora (bacterial types, total load) and the storage temperature that mainly impacts N2-treatment efficiency requires further investigation.
2.1.2. Bacterial Counts Following Heat Treatments of Milk Samples
After 14 days of cold storage, both pasteurised milk samples P3 and P6 showed lower counts of heat resistant bacteria (Figure 2) compared to the corresponding total counts (Figure 1A,B). Interestingly, following the heat treatments, the counts retrieved from P3/N and P6/N were slightly lower compared to their corresponding controls (P3/C and P6/N), which suggests that the N2 gas flushing treatment applied over 14 days did not stimulate massive sporulation of aerobic bacteria. Considering the considerable diversity of spore-formers present in milk, more studies are needed to investigate whether some species might be sporulating under the N2 gas treatment. Nevertheless, preliminary observations from isolates selected from pasteurised milk showed that sporulation did not occur under the N2-treatments at 6 °C .
2.1.3. Microbiological Analyses of Raw Milk and the Corresponding Pasteurised Milk
The analyses of the raw milks (L2R and L3R, Figure 3A,C) revealed that bacterial growth was hindered in both samples under N2 gas flushing, despite high initial counts for L2R (Figure 3A). Contrary to data from the raw milk analyses , a complete inhibitory effect of bacterial growth by N2 was not observed here. Nevertheless, the N2 treated samples L2R and L3R required a double cold storage time at 6 °C to reach the level of 9 log-units compared to the corresponding controls (Figure 3A,C).
Both samples from the milks pasteurised (73 °C/15 s) at the university pilot plant exhibited rather similar initial bacterial counts (approximately 2.5 log units, Figure 3B,D). No growth was observed, for either condition during the first storage days of L2P; the highest bacterial growth for C was recorded between sampling days 13 and 19 (Figure 3B). Total counts from the N2-treated sample L2P gradually increased, but still after 27 days, the counts were approximately 2.9 log-units lower than the control (Figure 3B). For L3P, no growth was observed for both the control and the N2-treated milk sample until day 14 of cold storage. Afterwards, the counts continuously increased for the control (Figure 3D). Most interestingly, in this study, the counts enumerated from L3P under continuous N2 flushing increased by less than one log-unit only within 35 days cold storage at 6 °C. Until the end of the experiment, the counts remained below the bacteriological limits defined for pasteurised milk.
The comparison of the raw and the corresponding pasteurised milks (Figure 3) suggests that maximum efficiency of the N2 treatment is gained at the pasteurised milk stage when the raw milk quality was best i.e., when the rate of bacterial growth was minimal, when the initial bacterial counts were lowest (when the raw milk was most fresh). At the time when the N2-flushing treatments started, the retail pasteurised milk samples P3 and P6 had 4 or 5 days of cold storage history (according to the packaging dates), respectively whereas the samples L2P and L3P from the pilot plant were treated shortly after pasteurisation, which could explain a greater delay in bacterial growth in the later cases (irrespective of the conditions, whether C or N) (Figure 3B,D compared to Figure 1A,B). The observation that the efficiency of the N2-treatments depended on the “application stage” was already made for raw milks, where the inhibitory effect was maximal when N2 gas was applied on fresh raw milks with low initial bacterial counts .
The comparison of the N2-treatment efficiency at 6 °C and 8 °C (Figure 1A,B and Figure 3B,D) indicates that the inhibitory effects on bacterial growth were higher at the lowest temperature, which is in line with former observations from raw milk . The pH of the pasteurised milk was not affected by the treatments; the initial pH values ranged from 6.69 to 6.87. Following N2-flushing, the pH values were between 6.82 and 6.87, compared to 6.60 and 6.87 for the corresponding controls, which indicates that the pH of pasteurised milk is not altered following the continuous application of N2, as already found for raw milk [24,27].
2.2. Characterisation of Selected Bacterial Isolates by 16 rRNA and rpoB Gene Sequences
The agar plates from control and treated milks harboured greater bacterial diversity at the beginning of cold storage, as less distinct types of bacteria appeared on plates after time had elapsed. A number of bacterial isolates were selected from both control and treated milk samples (Table 1). Colonies that grew under N2 gas flushing were preferred in order to identify species that resist the treatment.
The 16S rDNA sequence of P3Nd3, isolated three days after N2 flushing, showed 99% sequence similarity with Microbacterium lacticum (Table 1). L2PCa21, isolated after three weeks of storage at 6 °C from the control sample L2PC, showed 99% sequence similarity with both 16S rDNA and the rpoB gene of Paenibacillus odorifer (Table 1). P. odorifer was first isolated from wheat roots and pasteurised pureed courgettes ; recently, it has been commonly found in pasteurised milk .
It has been shown that Paenibacillus isolates, which are most prominent at the end of cold storage , constitute the key biological barrier together with other Bacillus spp., that limits the shelf life of pasteurised milk during cold storage in the US. At the beginning of this study, we anticipated that N2 gas flushing would favour the growth of Paenibacillus species, as at least eight Paenibacillus species (among them P. odorifer) harbour nitrogen fixing strains [31,32]. As no Paenibacillus was encountered here in N2-treated milk, we may hypothesise that Paenibacillus bacteria were present in lower amounts in our pasteurised milk samples or were sensitive to N2 gas during cold storage. Further studies are required to verify whether N2 exerts inhibitory effects against Paenibacillus during cold storage.
Based only on the 16S rDNA partial sequence, the taxonomic assignation could not be resolved for the isolates L2PNa, L2PNa13 and L2PNa6, which were attributed to different Bacillus species. Due to the high diversity, and hence, complex taxonomy at the Bacillus genus level, the identification of the later isolates requests thorough investigations.
Selected from three distinct samples (P3, P6 and L2P), from different sampling times, under conditions C or N, and from different agar plates (to limit “clonality”), the analyses of the partial 16S rDNA sequences revealed that 18 out of 24 isolates showed 99% sequence similarity with the 16S rDNA of Bacillus weihenstephanensis, B. mycoides, B. thuringiensis, and B. anthracis (Table 1). Out of one isolate (L2PNb, Table 1), all isolates were selected from milks that were placed in cold storage for more than 7 days (at 6 or 8 °C). All isolates exhibited protease and phospholipase activities; in the tested conditions, also 11 isolates appeared to be lipase producers (Table 1). Comparative analyses of the sequences showed that, despite the intercistronic variability (when considering the 14 rrn operons of Bacillus weihenstephanensis BcerKBAB4), the majority of the isolates showed total sequence identity with the consensus sequence of the 14 rrn operons, and with the 16S rDNA sequence of B. weihenstephanensis DSM 11821 (NR_024687.1). The sequence of L2PNb was most divergent, as five nucleotides out of 650 differed from the consensus sequence. The rpoB partial gene sequence revealed that 15 of 18 isolates showed 98% to 99% sequence similarity with the rpoB gene of Bacillus weihenstephanensis (CP000903), further strengthening the assignation to B. weihenstephanensis species (Table 1).
Bacillus weihenstephanensis was recognised as psychrotolerant and was differentiated from Bacillus cereus by its ability to grow at 7 °C but not at 43 °C; the nucleotide sequence 1003TCTAGAGATAGA was proposed as a signature of the species . During our analyses, we noticed that this sequence was also present in Bacillus mycoides (NR_036880.1). In a recent study, Bacillus weihenstephanensis was more often retrieved from raw milk than from pasteurised milk samples . Interestingly, the investigations with the psychrotolerant strain KBAB4 showed that the virulence gene expression was in part determined by temperature; higher virulence and cytotoxicity was observed at 15 °C compared to 30 °C .
However, whether Bacillus weihenstephanensis is favoured during N2-treatment to the detriment of Paenibacillus spp. requires further investigations.
Whether N2-gas flushing treatments of raw and pasteurised milks enters the category of “green technology” to improve food safety and quality is on first view not questionable, considering that N2 gas is an acceptable chemical agent (E941) in organic farming and also in food production systems. The study at a pilot plant scale showed that N2 gas, extracted from compressed air, proved to be efficient in improving the quality of raw milk, even though treatments are far from optimised . However, N2, due to its abundance (79% in air), is not a finite resource and can be extracted from the air. To fully meet the sensibility of a “green” technology, the extraction of N2 from ambient air must occur in a fully sustainable matter.
The comprehension of the “biocidal effect” requires further investigation. Thus far, at the pasteurised milk level, bacterial growth was “only” inhibited (Figures 1 and 3) as visible from enumerated counts, which reflect the balance of cells that remain viable over dead ones. The major aim here was to investigate whether any inhibitory effect could be detected at all. Due to the use of non-selective agar media, no primary bacterial target was identified in this preliminary study. Conversely, bacterial isolates of B. weihenstephanensis survived cold storage periods of 7, 14, and 21 days (Table 1), following N2 treatment, and they were encountered in different milk samples.
From studies performed with raw milk in the laboratory and at the pilot plant scale, it appeared that phospholipases (PLases) producers were a clear target of the N2 treatment. This group of bacteria appeared to be excluded “sooner or later” by N2 treatment at the laboratory scale, and was also hindered at the pilot scale. In the latter, we implicate the lower purity of N2 gas applied with a delay to achieve a quick drop of O2 (due to technical limitations) for not tackling PLases producers as efficiently as in the laboratory scale [26,28]. The production of phospholipases is a common feature of both Gram (+) or (−) bacteria. Secreted phospholipases are not only involved in phosphate and carbon metabolism but are also virulence factors for pathogenic species . From the MYP (Mannitol Egg Yolk Polymyxin B) agar plates, we observed that isolates, which were unable to ferment mannitol but produced phospholipases, were “disappearing” from the agar plates over time. This observation enabled us to suggest that vegetative forms of B. cereus-types present in raw milk are one primary target of N2 treatment . Moreover, observations from Mac Conkey agar plates, which support the growth of Gram (−) bacteria suggest that, over time, lactose fermenters were favoured to the detriment of non-fermenters during cold storage and N2 treatment, thereby indicating that significant changes occur at the population level in flushed milk . As bacteria such as pseudomonads enter into the non-lactose-fermenter category, we assume that the effects of the N2 gas treatments are not Gram type-dependent.
Further studies are required to examine how some bacterial species circumvent the continuous N2 gas flushing as well as to identify the molecular mechanisms by which N2 exerts antibacterial effects against other bacterial species.
3. Experimental Section
3.1. Procurement of Raw and Pasteurised Milk Samples
The considered samples are listed in Table 2. For P3 and P6, 100 mL of milk were aseptically removed from 0.5 L milk containers, that were purchased from a local supermarket in Helsinki. Similarly, 100 mL of raw milks (L2R and L3R) and the corresponding pasteurised milks, L2P and L3P, were transferred into sterile bottles to be flushed shortly thereafter.
3.2. N2 Gas Treatments
The experimental system has been described . Briefly, N2 gas (from AGA Ltd, Riimimäki, Finland) of 99.999% purity is introduced with a constant flow rate of 120 mL/min, into the headspace of flasks via 0.2-μm sterile filters (Schleicher & Schuell GmbH, Dassel, Germany). The outlet tube, which also holds a sterile filter, enables gas exchange with the environment. In this study, to enable the simultaneous N2 gas treatment of several samples, different flasks were connected in series via tubes holding 0.2-μm sterile filters. For the experiments with L2 and L3, N2 gas was first flushed through the raw milks (L2R and L3R) and then through the pasteurised milk samples (L2P and L3P). All milk flasks were placed on a multi-place magnetic stirrer (Variomag, Oberschleißheim, Germany) that stirred the milk at 220 rpm at regular intervals. All experiments were carried out at a storage temperature of 6 °C, with the exception of sample P6, which was stored at 8 °C. Constant temperature was maintained by partial immersion of the bottles in a refrigerated water bath (MGW Lauda MS/2) using ethanol (99.5%) as a cooling agent, with an immersion thermostat to ensure constant temperature. The pH of the milks was measured with a Metrohm 744 pH meter (Metrohm Ltd., Herisan, Switzerland) at the beginning and end of the experiments.
3.3. Microbiological Analyses of Milk
Initial bacterial counts were determined on the day of retail pasteurised milk purchase. When raw and pasteurised milks were simultaneously considered, raw milks underwent overnight cold storage at 3.5 °C prior to their analyses. The N2 gas flow was briefly interrupted during sample collection. A sample of 500 μL from control or flushed milks was drawn, serially diluted in saline solution (0.85% NaCl), and cultured on PCA (Plate count agar) (LabM, Ltd., Heywood, UK). To determine the “total plate counts”, 50 μL from serial dilutions were spread over agar plates. The plates were incubated at 30 °C for 3 days in aerobic conditions. Microbial analyses were performed for controls (C) or treated milks (N) at different intervals (usually after every 3rd day), and total plate counts were determined from three replicates. The production of extracellular enzymes was investigated by agar-diffusion assays [36,37]: clear transparent areas and dark blue areas around colonies were considered as positive reactions for protease and lipase activity respectively; the observation of an opaque zone around colonies was indicative of phospholipase production.
3.4. Evaluation of Aerobic Spore Levels at the End of the N2-Flushing
Two milliliters of the control and flushed milks from samples P3 and P6 were placed into test tubes and heat treated at 75 °C for 15 min in a water bath. Fifty microliters of the heat-treated fractions P3/C–P3/N and P6/C-P6/N were spread over BHI (Brain Heart Infusion, Oxoid Ltd., Cambridge, UK) plates and incubated at 30 °C for 3 days in aerobic conditions. The colonies were enumerated from three replicates.
3.5. DNA-Based Characterisation of Bacterial Isolates
3.5.1. Selection of Isolates
For each milk sample, bacterial colonies present on PCA plates from the different sampling days were visually examined. Colonies with distinct aspects were purified, preserved on PCA agar slants at 5 °C, and also kept at −20 °C in BHI broth with 15% glycerol. Altogether 24 isolates (eight from each of the samples P3, P6 and L2P) were retained for further investigations (Table 1).
3.5.2. DNA Extraction
Bacterial DNA was extracted from overnight cultures in BHI broth using the Wizard® Genomic DNA Purification kit (Promega, Madison, WI, USA) according to the manufacturer’s guidelines.
3.5.3. Partial Sequencing of the 16S rRNA and rpoB Genes
Amplifications of approximately 0.7 kb and 0.4 kb PCR fragments of the 16S rRNA and rpoB genes were performed with DyNAzyme II polymerase (Finnzymes, Espoo, Finland) and DNA Polymerase kit (Thermo Fischer, Finland) with the primers W01 and W012 , rpoB1698f and rpoB2041r , respectively. The sequencing reactions were performed with the primers W01 and rpoB1698f at the DNA Sequencing and Genomics Laboratory (Institute of Biotechnology/University of Helsinki). Sequences analyses were performed with BLAST ( www.ncbi.nlm.nih.gov, ), and alignments were performed with Clustal-W (Mega 5, ).
The continuous flushing of N2 gas through the head space of bottles that contained pasteurised milks stored at 6 °C or 8 °C, showed high inhibitory effects on total bacterial counts in all experiments. When comparing retail pasteurised milks and milks pasteurised at the pilot plant scale, the treatments were most efficient when N2 was applied shortly after the pasteurisation stage. Moreover, the efficiency of the treatments at the level of pasteurised milk seemed to depend on the initial raw milk quality.
The analyses of the partial sequences of the 16S rRNA and rpoB genes revealed that the Bacillus species is common in milk under N2 treatment after prolonged cold storage. Irrespective of the conditions, whether C or N, Bacillus weihenstephanensis was present in all samples.
Indeed, the results obtained here indicate that N2 gas-based treatment of pasteurised milk constitutes an interesting approach to improve the quality of pasteurised milk and to extend the shelf life of pasteurised milk, although present data suggest that the treatments are temperature- and milk-age- (i.e., “quality of raw milk”) -dependent. To the best of our knowledge, no study thus far has considered the use of N2 gas to treat pasteurised milks.
AG was supported by an EMFOL (Erasmus Mundus Food of Life) grant. We thank Arto Nieminen and Timo Holopainen for their kind assistance with modifications of the N2 flushing system. BSc (Engin.) Jyri Rekonen is gratefully acknowledged for the gift of raw and pasteurised milk samples. This work is dedicated to the memory of Alfred Munsch.
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|Table 1. Spoilage features, 16S rRNA and rpoB gene nucleotide sequence-based characterization, of isolates from various pasteurized milk samples.|
|Isolates 1||Spoilage Features 2||Analyses of Gene Sequences|
|PR||LP||PL||Species||Acc. number in GenBank||% ID 3||Species||Acc. number in GenBank||% ID 3|
|P3Na7||+||−||+||Bacillus weihenstephanensis||NR_024697.1||99||Bacillus weihenstephanensis||CP000903.1||98|
|P3Ca14||+||−||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||98|
|P3Cb14||+||−||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|P3Na14||+||−||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||98|
|P3Nc14||+||−||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||98|
|P3Nd14||+||−||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|P6Na14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||98|
|P6Nb14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|P6Nc14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|P6Nd14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||98|
|P6Ne14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|P6Ng14||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|L2PNb||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. cereus||EF607283.1||99|
|B. mycoides||NR_036880.1||B. thuringiensis||CP001903.1||100|
|B. thuringiensis||NR_043403.1||B. cereus||FJ188319.1||99|
|B. anthracis||NR_041248.1||B. cereus||AE016877.1||100|
|L2PNa6||+||+||−||B. sonorensis||NR_025130.1||98||B. licheniformis||CP000002.3||96|
|B. subtilis ssp. subtilis||NR_027552.1||B. licheniformis||AE017333.1||96|
|B. subtilis ssp. subtilis||NR_027552.1||97|
|L2PNa17||+||+||+||B. weihenstephanensis||NR_024697.1||99||B. weihenstephanensis||CP000903.1||99|
|L2PCa21||−||+||−||Paenibacillus odorifer||NR_028887.1||99||Paenibacillus odorifer||AY493862.1||99|
|L2PNa27||+||+||+||B. weihenstephanensis||NR_0246971||99||B. weihenstephanensis||CP000903.1||99|
1P3, P6 and L2P correspond to the investigated pasteurised milk samples; C = control, N = N2 flushing; a, b = order of selection of the isolates; 0 to 27 = days of cold storage;2+ = positive, − = negative, ɛ = weak enzyme production;3only values equal or above 98% (with exception of L2PNa6).
|Table 2. Pasteurised and raw milks.|
|P3||Retail pasteurised milk (Arla Ingman Ltd, Finland)|
|P6||Retail pasteurised milk (Arla Ingman Ltd, Finland)|
|L2P||Raw milk L2R pasteurised (73 °C/15 s) at the pilot plant / Univ. of Helsinki|
|L3P||Raw milk L3R pasteurised (73 °C/15 s) at the pilot plant / Univ. of Helsinki|
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