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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">ijms</journal-id>
<journal-title>International Journal of Molecular Sciences</journal-title>
<abbrev-journal-title>Int. J. Mol. Sci.</abbrev-journal-title>
<issn pub-type="epub">1422-0067</issn>
<publisher>
<publisher-name>Molecular Diversity Preservation International (MDPI)</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3390/ijms11114506</article-id>
<article-id pub-id-type="publisher-id">ijms-11-04506</article-id>
<article-categories>
<subj-group>
<subject>Article</subject></subj-group></article-categories>
<title-group>
<article-title>Insight into the Strong Antioxidant Activity of Deinoxanthin, a Unique Carotenoid in <italic>Deinococcus Radiodurans</italic></article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Ji</surname><given-names>Hong-Fang</given-names></name></contrib>
<aff id="af1-ijms-11-04506">Shandong Provincial Research Center for Bioinformatic Engineering and Technique, Shandong University of Technology, Zibo 255049, China; E-Mail: <email>jhf@sdut.edu.cn</email>; Tel.:+86-533-278-0271; Fax: +86-533-278-0271</aff></contrib-group>
<pub-date pub-type="collection">
<year>2010</year></pub-date>
<pub-date pub-type="epub">
<day>10</day>
<month>11</month>
<year>2010</year></pub-date>
<volume>11</volume>
<issue>11</issue>
<fpage>4506</fpage>
<lpage>4510</lpage>
<history>
<date date-type="received">
<day>23</day>
<month>10</month>
<year>2010</year></date>
<date date-type="rev-recd">
<day>3</day>
<month>11</month>
<year>2010</year></date>
<date date-type="accepted">
<day>7</day>
<month>11</month>
<year>2010</year></date></history>
<permissions>
<copyright-statement>© 2010 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland.</copyright-statement>
<copyright-year>2010</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0">
<p>This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).</p></license></permissions>
<abstract>
<p>Deinoxanthin (DX) is a unique carotenoid synthesized by <italic>Deinococcus radiodurans</italic>, one of the most radioresistant organisms known. In comparison with other carotenoids, DX was proven to exhibit significantly stronger reactive oxygen species (ROS)-scavenging activity, which plays an important role in the radioresistance of <italic>D. radiodurans</italic>. In this work, to gain deeper insights into the strong antioxidant activity of DX, the parameters characterizing ROS-scavenging potential were calculated by means of quantum chemical calculations. It was found that DX possesses lower lowest triplet excitation energy for its unique structure than other carotenoids, such as β-carotene and zeaxanthin, which endows DX strong potential in the energy transfer-based ROS-scavenging process. Moreover, the H-atom donating potential of DX is similar to zeaxanthin according to the theoretical homolytic O-H bond dissociation enthalpy. Thus, the large number of conjugated double bonds should be crucial for its strong antioxidant activity.</p></abstract>
<kwd-group>
<kwd>deinoxanthin</kwd>
<kwd>lowest triplet excitation energy</kwd>
<kwd>bond dissociation enthalpy</kwd>
<kwd>density functional theory</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<label>1.</label>
<title>Introduction</title>
<p><italic>Deinococcus radiodurans</italic> is a red-pigmented, nonphotosynthetic bacterium well known for its resistance to ionizing radiation [<xref ref-type="bibr" rid="b1-ijms-11-04506">1</xref>–<xref ref-type="bibr" rid="b3-ijms-11-04506">3</xref>]. It has been demonstrated that cellular antioxidants make important contributions to the radioresistance of <italic>D. radiodurans</italic> besides the efficient and accurate DNA repair strategy [<xref ref-type="bibr" rid="b4-ijms-11-04506">4</xref>,<xref ref-type="bibr" rid="b5-ijms-11-04506">5</xref>]. Among nonenzymic antioxidants, carotenoids possess efficient reactive oxygen species (ROS) scavenging capacity [<xref ref-type="bibr" rid="b6-ijms-11-04506">6</xref>]. It is interesting to note that <italic>D. radiodurans</italic> synthesizes a unique ketocarotenoid, deinoxanthin (DX, <xref ref-type="fig" rid="f1-ijms-11-04506">Figure 1</xref>), as its major carotenoid [<xref ref-type="bibr" rid="b7-ijms-11-04506">7</xref>–<xref ref-type="bibr" rid="b9-ijms-11-04506">9</xref>]. DX was proven to exhibit significantly stronger ROS scavenging ability than other known carotenoids, such as β-carotene (BC, <xref ref-type="fig" rid="f1-ijms-11-04506">Figure 1</xref>) and zeaxanthin (ZX, <xref ref-type="fig" rid="f1-ijms-11-04506">Figure 1</xref>) [<xref ref-type="bibr" rid="b9-ijms-11-04506">9</xref>], and the strong antioxidant effect of DX plays an important role in the radioresistance of <italic>D. radiodurans</italic> [<xref ref-type="bibr" rid="b9-ijms-11-04506">9</xref>]. Therefore, it is interesting to explore the mechanistic underpinnings underlying the higher antioxidant potential of DX relative to other carotenoids. In the present work, by means of quantum chemical calculations, the parameters to characterize the antioxidant potential of DX, including the lowest triplet excitation energy (E<sub>T1</sub>) and homolytic O-H bond dissociation enthalpy (BDE), were estimated. The theoretical results further our understanding of the higher ROS-scavenging activities of DX compared to BC and ZX.</p></sec>
<sec sec-type="methods">
<label>2.</label>
<title>Calculation Methods</title>
<p>The structures of DX, BC and ZX were fully optimized by hybrid density functional theory (DFT) [<xref ref-type="bibr" rid="b10-ijms-11-04506">10</xref>,<xref ref-type="bibr" rid="b11-ijms-11-04506">11</xref>] and B3LYP [<xref ref-type="bibr" rid="b12-ijms-11-04506">12</xref>–<xref ref-type="bibr" rid="b14-ijms-11-04506">14</xref>] functional with 6–31G(d) Gaussian basis set. The nature of the stationary point was ascertained by performing harmonic frequency calculations. The lowest triplet state energies (E<sub>T1</sub>s) of DX, BC and ZX were calculated by time-dependent DFT (TD-DFT) formalism [<xref ref-type="bibr" rid="b15-ijms-11-04506">15</xref>–<xref ref-type="bibr" rid="b17-ijms-11-04506">17</xref>] with the same basis set. To ensure the accuracy of the results, the O-H BDEs of DX and ZX were estimated using a combined method labeled as (RO)B3LYP/6-311+G(2d,2p)//AM1/AM1, which takes advantage of accuracy and economy [<xref ref-type="bibr" rid="b18-ijms-11-04506">18</xref>–<xref ref-type="bibr" rid="b21-ijms-11-04506">21</xref>]. As the hydroxyls of DX and ZX are not conjugated with the polyene chain, which should influence little on the O-H bond dissociation reactions, only one double bond in the polyene chain is reserved while the rest was replaced by a methyl when estimating the O-H BDEs of DX and ZX. The two hydroxyl groups of ZX are equivalent and only one is considered. The O-H BDE was estimated according to the following equation, O-H BDE = <italic>H</italic><sub>r</sub> + <italic>H</italic><sub>h</sub> – <italic>H</italic><sub>p</sub> [<xref ref-type="bibr" rid="b18-ijms-11-04506">18</xref>–<xref ref-type="bibr" rid="b21-ijms-11-04506">21</xref>], in which, <italic>H</italic><sub>r</sub> is the enthalpy of radical generated through H-abstraction reaction, <italic>H</italic><sub>h</sub> is the enthalpy of H-atom, −0.49765 hartree, and <italic>H</italic><sub>p</sub> is the enthalpy of parent molecule.</p>
<p>All calculations were performed using Gaussian 03 package of programs [<xref ref-type="bibr" rid="b22-ijms-11-04506">22</xref>].</p></sec>
<sec sec-type="results|discussion">
<label>3.</label>
<title>Results and Discussion</title>
<p>Carotenoids are efficient singlet oxygen (<sup>1</sup>O<sub>2</sub>) quenchers. Owing to the rather low E<sub>T1</sub> of carotenoids, <sup>1</sup>O<sub>2</sub> can be quenched through energy transfer (<xref ref-type="disp-formula" rid="FD1">Equation 1</xref>); generating triplet excited state carotenoids and ground state oxygen (<sup>3</sup>O<sub>2</sub>).
<disp-formula id="FD1">
<label>(1)</label>
<mml:math display="block">
<mml:mtext>Car</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:msub>
<mml:mtext>S</mml:mtext>
<mml:mn>0</mml:mn></mml:msub>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo>+</mml:mo>
<mml:msup><mml:mtext/>
<mml:mn>1</mml:mn></mml:msup>
<mml:msub>
<mml:mtext>O</mml:mtext>
<mml:mn>2</mml:mn></mml:msub>
<mml:mo>→</mml:mo>
<mml:mtext>Car</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:msub>
<mml:mtext>T</mml:mtext>
<mml:mn>1</mml:mn></mml:msub>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo>+</mml:mo>
<mml:msup><mml:mtext/>
<mml:mn>3</mml:mn></mml:msup>
<mml:msub>
<mml:mtext>O</mml:mtext>
<mml:mn>2</mml:mn></mml:msub></mml:math></disp-formula></p>
<p>The <sup>1</sup>O<sub>2</sub> quenching capability is a good indicator of the E<sub>T1</sub>. <xref ref-type="table" rid="t1-ijms-11-04506">Table 1</xref> lists the TD-B3LYP/6-31G(d) estimated E<sub>T1</sub> of DX, BC and ZX. The theoretically predicted E<sub>T1</sub>s of BC and ZX are close to the experimental value [<xref ref-type="bibr" rid="b23-ijms-11-04506">23</xref>,<xref ref-type="bibr" rid="b24-ijms-11-04506">24</xref>], which verifies the methodology.</p>
<p>The E<sub>T1</sub>s of the three carotenoids are lower than the deactivation energy of <sup>1</sup>O<sub>2</sub> (0.97 eV), which indicates that they are <sup>1</sup>O<sub>2</sub> quenchers. Moreover, the E<sub>T1</sub> of DX is approximately 0.1 eV lower relative to those of BC and ZX. The lower E<sub>T1</sub> of DX will make the energy transfer process more favorable energetically, relative to the other two carotenoids, which is consistent with the experimental finding that DX possesses stronger <sup>1</sup>O<sub>2</sub> quenching ability than BC and ZX [<xref ref-type="bibr" rid="b9-ijms-11-04506">9</xref>]. Moreover, it was reported that the <sup>1</sup>O<sub>2</sub> quenching enhanced as the number of conjugated double bonds in the polyene chain of carotenoids increased, by examining various naturally occurring carotenoids [<xref ref-type="bibr" rid="b25-ijms-11-04506">25</xref>]. Thus, it can be inferred that the higher <sup>1</sup>O<sub>2</sub> quenching ability of DX than that of other carotenoids should mainly arise from its extended conjugated double bonds system.</p>
<p>The direct H-atom transfer is one of the most important radical-scavenging processes [<xref ref-type="bibr" rid="b18-ijms-11-04506">18</xref>–<xref ref-type="bibr" rid="b21-ijms-11-04506">21</xref>]. Taking RO· as an example, the direct H-atom transfer process can be represented as follows.
<disp-formula id="FD2">
<label>(2)</label>
<mml:math display="block">
<mml:mtext>CarOH </mml:mtext>
<mml:mo>+</mml:mo>
<mml:mtext> RO</mml:mtext>
<mml:mo>⋅</mml:mo>
<mml:mtext> </mml:mtext>
<mml:mo>→</mml:mo>
<mml:mtext> CarO</mml:mtext>
<mml:mo>⋅</mml:mo>
<mml:mtext> </mml:mtext>
<mml:mo>+</mml:mo>
<mml:mtext> ROH</mml:mtext></mml:math></disp-formula></p>
<p>Among the three carotenoids, DX and ZX possess hydroxyls as potential H-atom donors in their structures. O-H BDE acts as an appropriate parameter to characterize the H-atom donating ability [<xref ref-type="bibr" rid="b18-ijms-11-04506">18</xref>–<xref ref-type="bibr" rid="b21-ijms-11-04506">21</xref>]. The O-H BDE of the hydroxyl in the six-membered ring of DX is calculated to be about 101.92 kcal/mol, and that of the butyl hydroxyl at the end of the polyene chain is about 104.71 kcal/mol. This indicates that on thermodynamic grounds the hydroxyl in the six-membered ring should play a predominant role in the H-atom transfer-based ROS scavenging processes of DX. Moreover, the theoretical O-H BDE of ZX is about 101.74 kcal/mol. The close O-H BDEs between DX and ZX imply that they possess similar H-atom donating potential thermodynamically.</p>
<p>Collectively, the extended conjugated double bonds system of DX seems crucial for its strong ROS-scavenging activity. The larger number of conjugated double bonds means DX possesses lower E<sub>T1</sub>, and thus higher <sup>1</sup>O<sub>2</sub> quenching potential through energy transfer, in comparison with BC and ZX. The strong ROS scavenging ability of DX renders this unique carotenoid great potential in antioxidant therapy application.</p></sec></body>
<back>
<ack>
<p>This work was supported in part by the National Natural Science Foundation of China (Grant No.30700113).</p></ack>
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<sec sec-type="display-objects">
<title>Figure and Table</title>
<fig id="f1-ijms-11-04506" position="float">
<label>Figure 1.</label>
<caption>
<p>Chemical structures of deinoxanthin, β-carotene and zeaxanthin.</p></caption><graphic xlink:href="ijms-11-04506f1.gif"/></fig>
<table-wrap id="t1-ijms-11-04506" position="float">
<label>Table 1.</label>
<caption>
<p>Theoretically estimated lowest triplet excitation energies (E<sub>T1</sub>) of deinoxanthin (DX), β-carotene (BC) and zeaxanthin (ZX) (in eV).</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr><th align="left" valign="bottom"/>
<th align="center" valign="bottom"><bold>DX</bold></th>
<th align="center" valign="bottom"><bold>BC</bold></th>
<th align="center" valign="bottom"><bold>ZX</bold></th></tr></thead>
<tbody>
<tr>
<td align="left" valign="top">Theoretical data</td>
<td align="center" valign="top">0.69</td>
<td align="center" valign="top">0.80</td>
<td align="center" valign="top">0.80</td></tr>
<tr>
<td align="left" valign="top">Experimental data</td>
<td align="center" valign="top">-</td>
<td align="center" valign="top">0.88 [<xref ref-type="bibr" rid="b23-ijms-11-04506">23</xref>]</td>
<td align="center" valign="top">0.87 [<xref ref-type="bibr" rid="b24-ijms-11-04506">24</xref>]</td></tr></tbody></table></table-wrap></sec></back></article>
