Reprint

Advances in Single Molecule, Real-Time (SMRT) Sequencing

Edited by
November 2019
128 pages
  • ISBN978-3-03921-700-7 (Paperback)
  • ISBN978-3-03921-701-4 (PDF)

This book is a reprint of the Special Issue Advances in Single Molecule, Real-Time (SMRT) Sequencing that was published in

Biology & Life Sciences
Summary

PacBio’s single-molecule real-time (SMRT) sequencing technology offers important advantages over the short-read DNA sequencing technologies that currently dominate the market. This includes exceptionally long read lengths (20 kb or more), unparalleled consensus accuracy, and the ability to sequence native, non-amplified DNA molecules. From fungi to insects to humans, long reads are now used to create highly accurate reference genomes by de novo assembly of genomic DNA and to obtain a comprehensive view of transcriptomes through the sequencing of full-length cDNAs. Besides reducing biases, sequencing native DNA also permits the direct measurement of DNA base modifications. Therefore, SMRT sequencing has become an attractive technology in many fields, such as agriculture, basic science, and medical research. The boundaries of SMRT sequencing are continuously being pushed by developments in bioinformatics and sample preparation. This book contains a collection of articles showcasing the latest developments and the breadth of applications enabled by SMRT sequencing technology.

Format
  • Paperback
License
© 2020 by the authors; CC BY license
Keywords
statistical methods; DNA methylation; gene expression; single molecule real-time sequencing; allele-specific analysis; de novo assembly; SMRT sequencing; GRCh38; human reference genome; human whole-genome sequencing; population sequencing; Swedish population; n/a; low-input DNA; de novo genome assembly; long-read SMRT sequencing; mosquito; de novo assembly; PacBio single molecule real-time sequencing; Tricoplusia ni; insect genome; next generation sequencing; optical mapping; Cladobotryum protrusum; mycoparasite; cobweb disease; de novo assembly; SMRT sequencing; Gloeostereum incarnatum; whole genome sequencing; PacBio; secondary metabolite; cytochrome P450 enzyme (CYP); terpenoid; full length RNAseq; mRNA isoforms; protein isoforms; bone marrow cell subpopulations