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Non-Coding RNA 2017, 3(2), 16; doi:10.3390/ncrna3020016

Present Scenario of Long Non-Coding RNAs in Plants

1
Department of Biotechnology, BMS Block I, Panjab University, Sector 25, Chandigarh-160014, India
2
National Agri-Food Biotechnology Institute, C-127, Industrial Area, S.A.S. Nagar, Phase 8, Mohali 160071, Punjab, India
3
Department of Botany, Panjab University, Chandigarh 160014, India
*
Author to whom correspondence should be addressed.
Academic Editors: Jian-Hua Yang and Liang-Hu Qu
Received: 31 December 2016 / Revised: 3 March 2017 / Accepted: 20 March 2017 / Published: 24 March 2017
(This article belongs to the Special Issue Bioinformatics Softwares and Databases for Non-Coding RNA Research)
View Full-Text   |   Download PDF [265 KB, uploaded 24 March 2017]

Abstract

Small non-coding RNAs have been extensively studied in plants over the last decade. In contrast, genome-wide identification of plant long non-coding RNAs (lncRNAs) has recently gained momentum. LncRNAs are now being recognized as important players in gene regulation, and their potent regulatory roles are being studied comprehensively in eukaryotes. LncRNAs were first reported in humans in 1992. Since then, research in animals, particularly in humans, has rapidly progressed, and a vast amount of data has been generated, collected, and organized using computational approaches. Additionally, numerous studies have been conducted to understand the roles of these long RNA species in several diseases. However, the status of lncRNA investigation in plants lags behind that in animals (especially humans). Efforts are being made in this direction using computational tools and high-throughput sequencing technologies, such as the lncRNA microarray technique, RNA-sequencing (RNA-seq), RNA capture sequencing, (RNA CaptureSeq), etc. Given the current scenario, significant amounts of data have been produced regarding plant lncRNAs, and this amount is likely to increase in the subsequent years. In this review we have documented brief information about lncRNAs and their status of research in plants, along with the plant-specific resources/databases for information retrieval on lncRNAs. View Full-Text
Keywords: non-coding RNA; lncRNAs; genome-wide identification; biological roles; lncRNA databases non-coding RNA; lncRNAs; genome-wide identification; biological roles; lncRNA databases
This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. (CC BY 4.0).

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Bhatia, G.; Goyal, N.; Sharma, S.; Upadhyay, S.K.; Singh, K. Present Scenario of Long Non-Coding RNAs in Plants. Non-Coding RNA 2017, 3, 16.

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