A Comparative Study of O2, CO and CN Binding to Heme IX Protein Models
AbstractParametrization of a molecular-mechanics program to include terms specificfor five- and six-coordinate transition metal complexes results in computer-simulatedstructures of heme complexes. The principal new feature peculiar to five and sixcoordination is a term that measures the effect of electron-pair repulsion modified by theligand electronegativity and takes into account the different structural possibilities. Themodel system takes into account the structural differences of the fixing centre in thehaemoglobin subunits. The customary proximal histidine is added. The prosthetic groupheme IX is wholly considered in our model. The calculations show clearly that certainconformations are much more favourable that others for fixing O2. From the O2 bindingin haemoglobin, myoglobin and simple Fe porphyrin models it is concluded that the bentO2 ligand is best viewed as bound superoxide O2–. Axial ligands are practically free-rotating. A small modification of the model in both crystal and protein matrix affects theorientation of the ligands in experimental systems.
Scifeed alert for new publicationsNever miss any articles matching your research from any publisher
- Get alerts for new papers matching your research
- Find out the new papers from selected authors
- Updated daily for 49'000+ journals and 6000+ publishers
- Define your Scifeed now
Torrens, F. A Comparative Study of O2, CO and CN Binding to Heme IX Protein Models. Molecules 2004, 9, 632-649.
Torrens F. A Comparative Study of O2, CO and CN Binding to Heme IX Protein Models. Molecules. 2004; 9(8):632-649.Chicago/Turabian Style
Torrens, Francisco. 2004. "A Comparative Study of O2, CO and CN Binding to Heme IX Protein Models." Molecules 9, no. 8: 632-649.