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Review

Using Metagenomics to Connect Microbial Community Biodiversity and Functions

by
Lucas W. Mendes
1,*,
Lucas Palma Perez Braga
1,
Acacio A. Navarrete
1,
Dennis Goss de Souza
1,
Genivaldo G. Z. Silva
2 and
Siu M. Tsai
1
1
Cell and Molecular Biology Laboratory, Center for Nuclear Energy in Agriculture CENA, University of São Paulo, Piracicaba, SP, Brazil
2
Computational Science Research Center, San Diego State University, San Diego, CA, USA
*
Author to whom correspondence should be addressed.
Curr. Issues Mol. Biol. 2017, 24(1), 103-118; https://doi.org/10.21775/cimb.024.103
Submission received: 4 April 2017 / Revised: 3 May 2017 / Accepted: 7 June 2017 / Published: 6 July 2017

Abstract

Microbes constitute about a third of the Earth's biomass and are composed by an enormous genetic diversity. In a majority of environments the microbial communities play crucial roles for the ecosystem functioning, where a drastic biodiversity alteration or loss could lead to negative effects on the environment and sustainability. A central goal in microbiome studies is to elucidate the relation between microbial diversity to functions. A better understanding of the relation diversity-function would increase the ability to manipulate that diversity to improve plant and animal health and also setting conservation priorities. The recent advances in genomic methodologies in microbial ecology have provided means to assess highly complex communities in detail, making possible the link between diversity and the functions performed by the microbes. In this work we first explore some advances in bioinformatics tools to connect the microbial community biodiversity to their potential metabolism and after present some examples of how this information can be useful for a better understanding of the microbial role in the environment.
Keywords: using; metagenomics; connect; microbial; community; biodiversity; functions using; metagenomics; connect; microbial; community; biodiversity; functions

Share and Cite

MDPI and ACS Style

Mendes, L.W.; Braga, L.P.P.; Navarrete, A.A.; de Souza, D.G.; Silva, G.G.Z.; Tsai, S.M. Using Metagenomics to Connect Microbial Community Biodiversity and Functions. Curr. Issues Mol. Biol. 2017, 24, 103-118. https://doi.org/10.21775/cimb.024.103

AMA Style

Mendes LW, Braga LPP, Navarrete AA, de Souza DG, Silva GGZ, Tsai SM. Using Metagenomics to Connect Microbial Community Biodiversity and Functions. Current Issues in Molecular Biology. 2017; 24(1):103-118. https://doi.org/10.21775/cimb.024.103

Chicago/Turabian Style

Mendes, Lucas W., Lucas Palma Perez Braga, Acacio A. Navarrete, Dennis Goss de Souza, Genivaldo G. Z. Silva, and Siu M. Tsai. 2017. "Using Metagenomics to Connect Microbial Community Biodiversity and Functions" Current Issues in Molecular Biology 24, no. 1: 103-118. https://doi.org/10.21775/cimb.024.103

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