- freely available
Sensors 2007, 7(10), 2263-2272; doi:10.3390/s7102263
Abstract: Effective investigation of biomolecular structure and function with chip-based modern instruments often requires reliable and steady attachment of designated biomolecules on substrate. Here, we investigated the formation of self-assembled monolayer (SAM) with a new calixarene derivative containing bisazacrown ether at the lower rim (calixbisazacrown) where ammonium moieties of proteins can mainly be interacted with. Immobilization process of protein using bovine serum albumin (BSA) on the Au surface modified with calixbisazacrown monolyer as an artificial linker system was monitored by surface plasmon resonance (SPR) technique. The surface concentration of BSA calculated by the simulation of SPR experimental data was higher than that of a well-known similar commercial protein linker. These results can help in modeling and understanding of protein immobilization on solid surface as well as further development lab-on-a-chip (LOC) devices for biomedical diagnosis kit of certain protein related diseases as biomarkers.
Protein adsorption on the surface of a foreign material is the initial event for the diverse applications such as advanced biosensors, biochips, bioreactors and many diagnostic techniques. It is quite significant to construct a well–characterized linker system that can efficiently immobilize proteins . Calixarene, which has a particular structure of lower or upper rims can be modified to achieve more sophisticated structures to bind specific guest molecules than normal receptors . ProLinker™ is a well-known calixarene derivative protein linker that has been utilized for guanidinium, antibody, enzyme and membrane receptor's immobilization [3-7]. ProLinker™ has a unique surface chemistry, which forms a self-assembled monolayer (SAM) on the gold surface and allows tight binding of capture proteins to the crown moiety of the linker molecules. The major binding force could be attributed to the ionized amine groups of capture proteins, which bind to the crown moiety of the linker molecule via host-guest interactions. Also, hydrophobic interactions between hydrophobic residues of a protein and methoxy groups of the calixcrown ether molecule may also be involved in protein immobilization. It preserves the random orientation of capture proteins, keeps the native composition of proteins and improves the accessibility for interaction proteins.
Azacrown ether same as crown ether has been used in the synthesis of artificial receptors for cations, anions and neutral organic molecules [8-11]. The nitrogen in the azacrown ring instead of the oxygen in the crown ring has free electron pairs that may be involved in stronger hydrogen binding with the ammonium ion moieties of protein than that of crown ether. Based on above, calixarene azacrown derivatives are expected to be an artificial linker molecule system for protein immobilization. However, studies dealing with the immobilization of protein on the azacrown ether derivatives are quite sparse. In this study, a calixarene bisazacrown derivative was synthesized with a upper rim of thiol group and two aza-18-crown-6 groups in the lower rim. In order to construct a well–characterized linker layer, calixarene bisazacrown was self-assembly immobilized on gold surface. The linker monolayer formation process was investigated with SPR spectroscopy. For the application to protein linker, BSA as a standard protein was immobilized on the calixbisazacrown linker system. The surface concentration of BSA was calculated, which was found to be comparable with that of a commercial protein linker (ProLinker™).
BSA (B-4287, for molecular biology) and phosphate-buffered saline (PBS) were obtained from Sigma Chemical Co. (St. Louis, MO, USA). Tetrabenzylammonium chloride (>99%) and tetrmethyl-ammonium chloride (>99%) used for NMR were bought from Fluka Chemical Co. All other reagents were purchased from Aldrich Chemical Co. (Milwaukee, WI, USA). The molecular structures of calixbisazacrown and ProLinker™ were shown in Figure 1. ProLinker™ was obtained from Proteogen Co. (Seoul, Korea). A Milli-Q grade (>18.2 m Ω·cm) water was used for the preparation of buffer solutions.
2.2 Synthesis and characterization of calixbisazacrown
The calixbisazacrown was synthesized based on the procedures of the following literatures [12, 13]. The synthetic scheme was shown in Figure 1. Two aza-18-crown-6 were synthesized on the lower rim of calixarene to bind with the ammonium ions of proteins. The thiol group on the upper rim is for the self-assembly immobilization on the gold surface.
2.2.1 Synthesis of 1
A mixture of calixarene (1.7 g, 4 mmol), K2CO3 (0.68 g, 4.9 mmol) and ethyl bromoacetate (1.40 g, 8.4 mmol) was dissolved in CH3CN (200 mL) and stirred for 24 h at room temperature. The solvent was completely removed by vacuum distillation. The residue was extracted with CH2Cl2 (20 mL) and washed with deionized (DI) water for 3 times, followed drying with MgSO4 and evaporating the solvent. The product was recrystallized from CH2Cl2/MeOH (95: 5 v/v) to afford white solid (3.25 g, 79%).
1H NMR (400 MHz, CDCl3) δ 7.04 (d, J=7.5Hz, Ar-H), 6.89 (d, J = 7.5 Hz, 4H, Ar-H), 6.72 (t, J = 7.5Hz, 2H, Ar-H), 6.65 (t, J = 7.5 Hz, 2H, Ar-H), 4.72 (s, 4H, -OCH2CO-), 4.48 (d, J = 13.0 Hz, 4H, -CHaHb), 4.32 (q, J = 7.0 Hz, 4H, -COCH2CH3), 3.39 (d, J = 13.0 Hz, 4H, -CHaCHb-), 1.34 (t, J = 7.0 Hz, 6H, -COCH2CH3) 1.34 (t, J = 7.0 Hz, 6H, -COCH2CH3); 13C NMR (100 MHz, CDCl3) δ 169.3, 153.4, 152.4, 152.8, 133.5, 129.5, 129.26, 129.20, 128.9, 128.6, 127.9, 120.6, 119.5, 78.3, 72.9, 61.8, 31.9, 14.6.
2.2.2 Synthesis of 2
A mixture of 1 (2.75 g, 4.6 mmol), THF (80 mL), tetramethylammoniu hydroxide (25 wt.% solution in water, 40mL) and distilled water (80 mL) was stirred for 24h. The solvent was removed. The residue was extracted with 3N HCl and washed with DI water for 3 times, then, dried with MgSO4 in vacuum. White chunk powders were obtained (1.9 g, 91%).
1H NMR (400 MHz, CDCl3) δ7.11 (d, J = 7.5 Hz, 4H, Ar-H), 7.0 (d, J = 7.6Hz, 4H, Ar-H), 6.76 (t, J = 7.6 HZ, 2H, Ar-H), 4.70 (s, 4H, -OCH2CO-), 4.38 (d, J = 13.0 Hz, 4H, -CHaHb), 3.40 (d, J = 13.0 Hz, 4H, - CHaHb-); 13C NMR (100 MHz, CDCl3) δ 170.8, 153.2, 152.8, 133.8, 129.3, 128.9, 128.2, 125.4, 119.3, 72.7, 30.9.
2.2.3 Synthesis of 3
2 (134 mg, 0.25 mmol) in THF (10 mL) was dropped into oxalyl chloride (116 mg, 0.9 mmol) in DMF using ice-bath and stirred for 40 min. Yellow solid was obtained after evaporating the solvent.
2.2.4 Synthesis of 4
1-aza-18-crown-6 ether (131 mg, 0.5 mmol) was dissolved in dehydrated THF (5 mL) under N2, and then added to triethylamine (80 μL). The mixture solution was reacted with 3 (144 mg, 0.25 mmol) solved in dehydrated THF (10 mL) under N2 gentle stirring for 10 min at 0°C and 5 hours at room temperature. Then, the residue was filtered by Celite. The product was separated by silica gel column with CH2Cl2: MeOH (95: 5 v/v) as an eluent. White solid powders (224 mg, 91%) were obtained after evaporation.
1H NMR (400 MHz, CDCl3) δ 8.04 (s, 2H, Ar-H), 6.99 (d, J = 7.5 Hz, 4H, Ar-H), 6.88 (t, J = 7.5Hz, 4H, Ar-H), 6.72 (t, J = 7.5Hz, 2H, Ar-H), 6.58 (t, J = 7.6Hz, 2H, Ar-H) 4.89 (s, 4H, -OCH2CO-), 4.49 (d, J = 13.1 Hz, 4H, -CHaHb), 3.79-3.73 (m,48H, -OCH2CH2NCH2CH2O-), 3.3 (d, J = 13.1 Hz, 4H, - CHaHb-); 13C NMR (100 MHz, CDCl3), δ 168.3, 153.5, 153.1, 133.6, 128.9, 128.3, 128.2, 125.2, 118.8, 73.8, 71.1, 70.77, 70.75, 70.69, 70.65, 70.64, 70.5, 70.4, 69.8, 69.5, 48.6, 47.0, 31.6.
2.2.5 Synthesis of calixbisazacrown
CHCl3 (15 mL) and chloromethyl methyl ether (125 mg, 1.55 mmol, 0.12 mL) were mixed under N2 gas purging in ice bath for 3 min. 1 M-SnCl3 (in CH2Cl2, 0.78 mL, 0.78 mmol) was added and stirred for 15 min. Then 4 (40 mg, 0.039 mmol) dissolved in CHCl3 (10 mL) solution was added to the mixture solution, followed stirring in the ice bath for 1 hour and at room temperature for 3 hours. The organic layer was washed gently using DI water 2 times and dried out with MgSO4. The final powder was white colored using the same method as the previous method. Then, the white solid powder (20 mg, 0.018 mmol) and thiourea (8 mg, 0.1 mmol) was mixed under non-/oxigen state with N2 gas purging. The sample in DMF (7 mL) was stirred for 12 h. The solvent was removed and dried with MgSO4. Then THF (10 mL) and 3N NaOH (0.5 mL) and DI water (5 mL) were added in series and stirred for 10 min. CH2Cl2 (5 mL), NH4Cl (10 mL) and NaBH4 (80 mg) were added to the residue after evaporating the solvent. The organic layer was washed out by DI water and dried by MgSO4. Yellow solid aggregates were obtained after removing the solvent (18 mg, 45%).
1H NMR (400 MHz, CDCl3) δ 6.90 (s, 4H, Ar-H), 6.81 (d, J = 7.5 Hz, 4H, Ar-H), 6.65 (t, J = 7.5Hz, 2H, Ar-H), 4.82 (s, 4H, -OCH2CO-), 4.40 (d, J = 13.0 Hz, 4H, -CHaHb), 4.22 (s, 4H, -CH2SH), 3.71-3.53 (m, 48H, -OCH2CH2NCH2CH2O-), 3.26 (d, J = 13.0 Hz, 4H, - CHaHb-); 13C NMR (100 MHz, CDCl3) δ 167.6, 152.4, 151.7, 132.4, 127.9, 127.3, 127.0, 124.5, 124.2, 73.7, 72.7, 70.0, 69.7, 69.64, 69.58, 69.44, 69.3, 68.7, 68.5, 56.6, 47.5, 45.9, 30.6, 24.6.
2.3 Formation of calixazacrown and ProLinker™ SAMs
A gold chip (2 nm chromium adhesion layer and 45 nm of gold) constructed of one body with a prism (18 × 18 mm) was purchased from K-MAC (Daejeon, Korea). The bare gold chip surface was carefully rinsed with methanol and swelled in a mixed solution (CHCl3:MeOH = 1:199 (v/v)). ProLinker™ and calixbisazacrown were prepared to 0.1 mM of the mixed solution (CHCl3:MeOH = 1:199 (v/v)) for the SAM formation on gold surface. The SAMs were formed by flow two solutions through two gold chips for about 5 h with a flow rate of 5 μL/min separately. The immobilization process was monitored by SPR spectroscopy. After the immobilization process, the sensor chip was sequentially rinsed with mixed solution, methanol and DI water.
2.4 BSA immobilization and surface concentration calculation
BSA was used as a standard protein to observe the protein immobilization on the artificial linker layers and theoretical calculation. The concentration of BSA solution for protein immobilization was 5 μM in phosphate buffer (0.01 M, pH 7.4). The immobilization process of BSA was measured by SPR. The surface concentration of immobilized BSA was calculated according to the following equation (eq. 1) .where, Γ and d are the surface concentration of adsorbed molecules and the thickness of adsorbed layer, respectively. nb and n are the refractive index of the buffer solution and the adsorbed layer, respectively. r and v are the specific refractivity of BSA (0.243 ml/g) and the partial specific volume of BSA (0.729 ml/g) deposited on the linker layer.
The optical parameters were determined by the simulation from the experimental SPR data. They were required for the calculation of the surface concentration of immobilized BSA and SAMs . In order to determine optical constant of each layer theoretically, the four-layer model was applied to our study.
2.5 SPR spectroscopic measurement
SPR spectroscopic measurements for the monolayer formation of ProLinker™ and calixbisazacrown SAMs and BSA immobilization were measured by commercial SPR system (K-MAC Co., SPR Lab, Daejeon, Korea). SPR measurements were performed at 25℃ (±0.1) with the resolution of 0.01°. A schematic diagram of sensor chip configuration is shown in Figure 2.
3. Results and Discussion
3.1 Formation of SAMs
In the immobilization process, as the number of immobilized molecule increasing, the SPR angle shifted to higher angle and saturated at inner 5 h for both of SAMs as shown in Figure 3. SPR angle shifts (Δθ) that caused by the fabrication of SAMs were 0.08° (ProLinker™), 0.17° (Calixbisazacrown) respectively. Both SPR simulation results showed the calixbisazacrown has bigger d and n value than that of ProLinker™, which may contribute to the big SPR angle shift of calixbisazacrown SAM (Table 1).
3.2 BSA immobilization on the SAMs
Crown ethers have been studied extensively due to their ability to bind metal cations. The ability of crown ethers, particularly 18-crown-6 (18C6), to complex with ammonium or alkylammonium ions in the gas phase has also been demonstrated [14, 15]. Protein was immobilized on the crown ether layer via host-guest and hydrophobic interactions . The nitrogen in the aza-18-crown-6 instead of the oxygen has free electron pairs that may be involved in strong hydrogen binding with the ammonium ion in the captured protein.
In the study of protein immobilization process using BSA, as the adsorbed BSA molecule increased on gold surface, SPR angle shifts were gradually increased and saturated at inner 2 h (Figure 3).
To calculate the protein surface concentration, the optical parameters are required by simulation with experimental SPR data. Figure 4 showed the experimental and calculated SPR curves of ProLinker™ and calixbisazacrown SAMs according to the immobilization of BSA. The optical parameters of two SAMs were shown in Table 1. The calculated BSA surface concentrations are 175 ng/cm2 (on ProLinker™ SAM) and 197 ng/cm2 (on calixbisazacrown SAM) respectively.
Although two SAMs were formed on the commonly deposited gold surface instead of on the gold (111) crystal, the surface concentration of immobilized BSA on the SAMs are similar to that of well-ordered alkanethiol SAM on gold (111) surface , which indicates the immobilized BSA on these two SAMs is near well ordered monolayer state.
ProLinker™ is a commercial protein linker and has been confirmed by many experiments [3-6]. BSA surface concentration on the ProLinker™ SAM is 11% less than that of on the calixbisazacrown SAM. It may result from 1) the calixbisazacrown has two crown ether rings which afford more opportunities to interact with proteins; 2) the hydroxyl groups in calixbisazacrown are substituted to the methoxy groups in ProLinker™. Therefore, the formation of hydrogen bonds between calixbisazacrown and protein in hydrophobic pocket surrounded by great proteins boundary may induce stronger interactions; 3) the calixbisazacrown rings have higher flexibility than one crown ether ring of ProLinker™, which may preserve the protein's native activity and contribute to increase the immobilized protein's binding efficiency . Additionally, the nitrogen in the azacrown ring has free electron pairs which may also be involved in stronger hydrogen binding with the ammonium ion moieties of protein. These results indicate that calixbisazacrown has practical advantage as a linker system for protein immobilization
In this study, calixbisazacrown which contains azacrown rings at the lower rim with a common reactive thiol at the upper rim was constructed to monolayer on Au surface. Surface confined calixbisazacrown has potential applications in the development of molecular linker layer for immobilizing protein by selective affinity at the surface. The interaction between BSA and surface confined calixbisazacrown was compared with commercial protein linker system by SPR. The surface concentration of immobilized BSA was higher than that of commercial protein linker system. These results indicate that the bisazacrown as a functional group at the lower rim of calixarene exert a critical effect on the stable affinity toward the protein onto the SAM. In conclusion, the main results of this research showed that the SPR technique and the novel well-designed calixarene derivative SAM are very useful to the development of more efficient biosensing interface through more efficient protein immobilization.
Author H.-J. Choi gratefully acknowledges the financial support of the research professor program of Kyungpook National University (2006).
References and Notes
- Silin, V.; Weetall, H.; Vanderah, D.J. SPR Studies of the Nonspecific Adsorption Kinetics of Human IgG and BSA on Gold Surfaces Modified by Self-Assembled Monolayers (SAMs). J. Colloid Interface Sci. 1997, 185, 94–103.
- Yilmaz, A.; Memon, S.; Yilmaz, M. Synthesis and study of allosteric effects on extraction behavior of novel calixarene-based dichromate anion receptors. Tetrahedron 2002, 58, 7735–7740.
- Lee, Y.; Lee, E.K.; Cho, Y.W.; Matsui, T.; Kang, I.C.; Kim, T.S.; Han, M.H. ProteoChip: a highly sensitive protein microarray prepared by a novel method of protein immobilization for application of protein–protein interaction studies. Proteomics 2003, 3, 2289–2304.
- Chen, H.; Lee, M.; Choi, S.; Kim, J.H.; Choi, H.J.; Kim, S.H.; Lee, J.; Koh, K. Comparative study of protein immobilization properties on calixarene monolayers. Sensors 2007, 7, 1091–1107.
- Sasakura, Y.; Kanda, K.; Suzuki, T.Y.; Matsui, T.; Fukuzono, S.; Han, M.H.; Shimizu, T. Protein Microarray System for Detecting Protein-Protein Interactions Using an Anti-His-Tag Antibody and Fluorescence Scanning: Effects of the Heme Redox State on Protein-Protein Interactions of Heme-Regulated Phosphodiesterase from Escherichia coli. Anal. Chem. 2004, 76, 6521–6527.
- Lee, Y.; Kang, D.K.; Chang, S.I.; Han, M.H.; Kang, I.C. High-Throughput Screening of Novel Peptide Inhibitors of an integrin receptor from the hexapeptide library by using a protein microarray chip. Journal of Biomolecular Screening 2004, 9, 687–694.
- Chen, H.; Kim, Y.S.; Keum, S.R.; Kim, S.-H.; Choi, H.-J.; Lee, J.; An, W.G.; Koh, K. Surface Plasmon Spectroscopic Detection of Saxitoxin. Sensors 2007, 7, 1216–1223.
- Gawley, R.E.; Pinet, S.; Cardona, C.M.; Datta, P.K.; Ren, T.; Guida, W.C.; Nydick, J.; Leblanc, M. Chemosensors for the Marine Toxin Saxitoxin. J. Am. Chem. Soc. 2002, 124, 13448–13453.
- Kim, J.S.; Shon, O.J.; Ko, J.W.; Cho, M.H.; Yu, I.Y.; Vicens, J. Synthesis and Metal Ion Complexation Studies of Proton-Ionizable Calixazacrown Ethers in the 1,3-Alternate Conformation. J. Org. Chem. 2000, 65, 2386–2392.
- Kimura, K.; Mizutani, R.; Suzuki, T.; Yokoyama, M. Photochemical Ionic-Conductivity Switching Systems of Photochromic Crown Ethers for Information Technology. J. Incl. Phenom. Macro. 1998, 32, 295–310.
- Choi, H.J.; Kwak, M.O.; Kim, J.M. Tetrahedrally Arranged Tetraamide Macrocycle: Synthesis and Properties of L-Tartaric acid-based Macrocyclic Tetraamide. Tetra. Lett. 1997, 38, 6217–6220.
- Iki, N.; Narumi, F.; Fujimoto, T.; Morohashi, N.; Miyano, S. Selective synthesis of three conformational isomers of tetrakis[(ethoxycarbonyl)methoxy]thiacalixarene and their complexation properties towards alkali metal ions. J. Chem. Soc. Perkin Trans. 1998, 2, 2745–2750.
- Corsel, J.W.; Willems, G.M.; Kop, J.M.M.; Cuypers, P.A.; Hermens, W.T. The role of intrinsic binding rate and transport rate in the adsorption of prothrombin, albumin, and fibrinogen to phospholipid bilayers. J. Colloid Interface Sci. 1986, 111, 544–554.
- Maleknia, S.; Brodbelt, J.S. Cavity-size-dependent dissociation of crown ether/ammonium ion complexes in the gas phase. J. Am. Chem. Soc. 1993, 115, 2837–3843.
- Lee, S.-W.; Lee, H.-N.; Kim, H.S.; Beauchamp, J. L. Selective Binding of Crown Ethers to Protonated Peptides Can Be Used to Probe Mechanisms of H/D Exchange Reactions and Collision-Induced Dissociation Reactions in the Gas Phase. J. Am. Chem. Soc. 1998, 120, 5800–5805.
- Nonogaki, T.; Xu, S.; Kugimiya, S.; Sato, S.; Miyata, I.; Yonese, M. 2-Dimensional Auto-Organized Nanostructure Formation of Hyaluronate on Bovine Serum-Albumin Monolayer and Its Surface- Tension. Langmuir 2000, 16, 4272–4278.
- Morozov, V.N. Protein Microarrays: Principles and Limitations. In Protein Microarrays; Schena, M., Ed.; Jones and Bartlett Publishers: Boston, 2004; p. p 83.
|Table 1. Surface concentration of the immobilized BSA, SAMs and optical parameters determined by theoretical simulation.|
|Monolayer||Bare gold||Linker Layer||BSA Layer||Surface Concentration|
n, k and d denote refractive index, extinction coefficient, geometrical thickness (nm) respectively.
© 2007 by MDPI (http://www.mdpi.org). Reproduction is permitted for noncommercial purposes.