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Enhancing Growth and Intestinal Health in Triploid Rainbow Trout Fed a Low-Fish-Meal Diet through Supplementation with Clostridium butyricum
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The Fractal Approach to Describe Growth of Farmed Marine Species: Using Double and Triple Logistic Models
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Another One Bites the Net: Assessing the Economic Impacts of Lagocephalus sceleratus on Small-Scale Fisheries in Greece
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Assessing the Technical and Economic Viability of Galvanizing Snow Crab (Chionoecetes opilio) Traps
Journal Description
Fishes
Fishes
is an international, peer-reviewed, scientific, open access journal published monthly online by MDPI. It covers fishes and aquatic animals research. The Iberian Society of Ichthyology (SIBIC) and the Brazilian Society of Aquaculture and Aquatic Biology (Aquabio) are affiliated with Fishes and their members receive a discount on the article processing charges.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, FSTA, and other databases.
- Journal Rank: JCR - Q2 (Marine & Freshwater Biology)
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 15.7 days after submission; acceptance to publication is undertaken in 2.8 days (median values for papers published in this journal in the second half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Testimonials: See what our editors and authors say about Fishes.
- Companion Journal: Aquaculture Journal
Impact Factor:
2.3 (2022);
5-Year Impact Factor:
2.4 (2022)
Latest Articles
Pharmacokinetics and Withdrawal Times of Cefotaxime in White Leg Shrimp (Litopenaeus vannamei) after Oral Administration
Fishes 2024, 9(6), 232; https://doi.org/10.3390/fishes9060232 - 17 Jun 2024
Abstract
A high-performance liquid chromatography method coupled to tandem mass spectrometry was validated in order to study the pharmacokinetics of cefotaxime in shrimp hepatopancreases and plasma, as well as its withdrawal time related to a maximum residue limit (MRL) in shrimp muscle. Pharmacokinetics parameters
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A high-performance liquid chromatography method coupled to tandem mass spectrometry was validated in order to study the pharmacokinetics of cefotaxime in shrimp hepatopancreases and plasma, as well as its withdrawal time related to a maximum residue limit (MRL) in shrimp muscle. Pharmacokinetics parameters were investigated through oral medication at a single dose of 25 mg/kg shrimp body weight and subsequent hepatopancreas and plasma cefotaxime concentration measurements at 0.5, 1, 2, 4, 8, 12 and 24 h after shrimp were fed with medication. The maximum concentration of cefotaxime was observed after one hour in the hepatopancreas (Cmax, 19.45 ± 2.10 mg/kg) and 4 h in plasma (0.184 ± 0.061 mg/L). Based on a minimum inhibitory concentration (MIC) of cefotaxime of 4.13 mg/L against Vibrio parahaemolyticus (known to cause acute hepatopancreatic necrosis disease (AHPND) in white leg shrimp), it was observed that the time during which the hepatopancreas cefotaxime concentration was above the MIC was 23 h. An every 24 h cefotaxime treatment could thus be effective in fighting against this bacterium in shrimp. The withdrawal time of cefotaxime was determined after shrimp were fed with medicated feed once a day and twice a day for three consecutive days. Shrimp muscle was collected on day 1 and day 3 during medication and 1, 3, 7, 14 and 21 days after medication was stopped. Considering an MRL of 50 μg/kg, the withdrawal times were 8.5 degree-days (corresponding to 6.9 h at 29.5 °C) after shrimp were fed with medicated feed once a day for 3 days and 95.5 degree-days (77.7 h at 29.5 °C) after shrimp were fed with medicated feed twice a day for 3 days. Moreover, histological analysis revealed that feeding shrimp with cefotaxime at the given dose in once- or twice-a-day treatments did not negatively impact the shrimp hepatopancreas.
Full article
(This article belongs to the Special Issue Pharmacokinetic in Aquatic Animals)
Open AccessCommunication
An Examination of the Effects of Dorsal Fin-Mounted SPOT on Carcharodon carcharias, the Great White Shark
by
Grace L. Hicks and Phillip S. Lobel
Fishes 2024, 9(6), 231; https://doi.org/10.3390/fishes9060231 - 17 Jun 2024
Abstract
This opinion piece presents empirical evidence to examine possible negative consequences of the use of penetrative tagging as used on the great white shark (GWS). Tagging programs currently using this method attach SPOT (Spatial Positioning Only Tags) using corrodible bolts inserted through the
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This opinion piece presents empirical evidence to examine possible negative consequences of the use of penetrative tagging as used on the great white shark (GWS). Tagging programs currently using this method attach SPOT (Spatial Positioning Only Tags) using corrodible bolts inserted through the dorsal fin while the shark is taken out of water. Such methods can cause harm to the tagged individual. Possible adverse effects include impacts on growth, tag biofouling, wounds, heightened stress, and hemorrhaging. This method may adversely impact dorsal fin structure and the shark’s hydrodynamics. As a result, data collected may not be reflective of natural behavior. Bolted SPOT are semi-permanently affixed to the shark but can have a battery life of approximately 3.5 years. Most of these tags (69%) ceased transmitting in less than 2 years. Alternative tagging technologies exist as more humane options.
Full article
(This article belongs to the Special Issue Elasmobranch Biodiversity, Conservation and Management)
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Open AccessArticle
Transcriptomic Revealed That Selenium-Rich Lactobacillus plantarum Alleviated Cadmium-Induced Immune Responses in Bulatmai barbel Luciobarbus capito Kidneys
by
Qingsong Sun, Yuran Pang, Yuhan Qin, Ziting Dong, Yanling Ma, Yuan Zhao, Zhanning Zhang, Jinmei Liu, Binghui Mao and Baishuang Yin
Fishes 2024, 9(6), 230; https://doi.org/10.3390/fishes9060230 - 16 Jun 2024
Abstract
Cadmium (Cd) is a common environmental pollutant that accumulates mainly in the kidneys and thus endangers the physiological health of aquatic animals. Selenium (Se) is a natural antidote to heavy metals that antagonises heavy metal toxicity and enhances the antioxidant capacity of organisms.
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Cadmium (Cd) is a common environmental pollutant that accumulates mainly in the kidneys and thus endangers the physiological health of aquatic animals. Selenium (Se) is a natural antidote to heavy metals that antagonises heavy metal toxicity and enhances the antioxidant capacity of organisms. Lactobacillus plantarum (L. plantarum) can reduce the toxicity of heavy metals through adsorption, reduction and metabolism. Studies have confirmed that the biological synthesis of Se nanoparticles (Bio-SeNPs) using bacterial microorganisms is simple, safe and less toxic than the synthesis of inorganic and organic Se, but the effect on Cd-induced immunosuppression is un-known. One hundred and eighty Bulatmai barbel (Luciobarbus capito: L. capito) plants were randomly divided into control (C), Cd and Cd + Se-enriched L. plantarum groups (S1L1-Cd) and fed for 28 days. The analysis methods included histopathology, test kits, transcriptomics and real-time quantitative PCR. The addition of selenium-enriched L. plantarum significantly attenuated cadmium-induced pathological changes such as glomerular atrophy, detachment of renal tubular epithelial cells, mild swelling, and interstitial inflammatory cell infiltration. Cd stress can lead to significant decreases in RBC, HCT, WBC, LZM, C3, and IgM levels, and the addition of Se-enriched L. plantarum can significantly reverse the changes in these indicators. Transcriptomic analysis revealed 488 DEGs in the Cd groups, 301 of which were upregulated and 187 of which were downregulated. There were 1474 DEGs in the S1L1-Cd group, of which 720 were upregulated and 754 were downregulated. In addition, GO enrichment analysis revealed that the biological regulation of the most differentially expressed genes involved metal ion binding, ATP binding and nucleotide inclusion. KEGG enrichment analysis revealed six of the most enriched pathways: oxidative phosphorylation, Huntington disease, retrograde endocannabinoid signalling, natural killer cell-mediated cyto-toxicity, the IL-17 signalling pathway, and leukocyte transient migration. Moreover, we selected 12 DEGs for qRT-PCR, which showed that the qRT-PCR results were consistent with our RNA-Seq results. Our results suggest that Se-enriched L. plantarum can enhance immunity and alleviate Cd exposure-mediated immunosuppression in L. capito.
Full article
(This article belongs to the Section Environment and Climate Change)
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Open AccessArticle
Effects of Dietary Supplementation with Endogenous Probiotics Bacillus subtilis on Growth Performance, Immune Response and Intestinal Histomorphology of Juvenile Rainbow Trout (Oncorhynchus mykiss)
by
Jing Wang, Dan Fan, Ran Zhao, Tongyan Lu, Shaowu Li and Di Wang
Fishes 2024, 9(6), 229; https://doi.org/10.3390/fishes9060229 - 15 Jun 2024
Abstract
The rainbow trout (Oncorhynchus mykiss) is an important commercial fish. Studies have shown that probiotics can promote the healthy growth of fish. In this study, we assessed the impact of an endogenous Bacillus subtilis strain (RT-BS07) on the growth, survival and
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The rainbow trout (Oncorhynchus mykiss) is an important commercial fish. Studies have shown that probiotics can promote the healthy growth of fish. In this study, we assessed the impact of an endogenous Bacillus subtilis strain (RT-BS07) on the growth, survival and immunological response of juvenile rainbow trout. Additionally, the morphology of rainbow trout’s intestinal tissue was measured. Control (CT) and experimental groups (B) were fed with conventional and probiotic-supplemented diets (1.0 × 108 CFU per gram) for 42 days, respectively. Following feeding, a challenge experiment was carried out with Aeromonas hydrophila at 1.0 × 107 CFU/mL to determine the experimental fish’s tolerance to the bacteria. The results showed that the weight gain rate (WGR) in group B was 118.2%, which was significantly higher than that in group CT (54.86%) after 42 days. The height of intestinal villi and the number of goblet cells increased in group B, thus increasing the resistance of rainbow trout to pathogenic bacteria. The alkaline phosphatase (AKP) activity (U/mg prot) in the liver, spleen and intestinal tissues of group B was significantly higher than that in the CT group. The expression of interleukin-1β (IL-1β) in the intestinal tissue of group B was 6-fold higher than that in group CT. Furthermore, the expression of growth hormone-2 (GH-2) in the spleen was 3-fold higher than that in group CT. After 12 days of A. hydrophila injection, the survival rate was 40% and 70% in group CT and group B, respectively. Collectively, the present study demonstrated that the addition of endogenous B. subtilis strain (1.0 × 108 CFU per gram) to the feed can effectively promote the growth of rainbow trout and enhance immunity, which is beneficial to rainbow trout culture.
Full article
(This article belongs to the Special Issue Advances in Rainbow Trout)
Open AccessArticle
Oxidative Status of the Pyloric Caeca and Proximal Intestine in Gilthead Sea Bream Fed Diets Including Different Vegetable Oil Blends from Palm, Rapeseed and Linseed
by
Irene García-Meilán, Ramon Fontanillas, Joaquim Gutiérrez, Encarnación Capilla, Isabel Navarro and Ángeles Gallardo
Fishes 2024, 9(6), 228; https://doi.org/10.3390/fishes9060228 - 14 Jun 2024
Abstract
Nowadays, including vegetable ingredients in fish diets without growth effects is common; however, their intestinal oxidative status under these conditions is less known. Five isonitrogenous and isolipidic diets with 75% vegetable oil (VO) inclusion were formulated for juvenile gilthead sea bream (Sparus
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Nowadays, including vegetable ingredients in fish diets without growth effects is common; however, their intestinal oxidative status under these conditions is less known. Five isonitrogenous and isolipidic diets with 75% vegetable oil (VO) inclusion were formulated for juvenile gilthead sea bream (Sparus aurata). As VO, one diet contained palm oil (diet P), another rapeseed oil (diet R), and the other three included linseed oil (L) combined with the above-mentioned VOs (named PL, RL and RPL diets). After 18 weeks, pyloric caeca (PC) and proximal intestine (PI) were analyzed for oxidative stress biomarkers, lipid peroxidation (LPO), and gene expression. Dietary linseed oil diminished the superoxide dismutase activity in both intestinal regions, catalase in PC and glutathione reductase in PI; rapeseed oil reduced the glutathione peroxidase (GPx) and glutathione-S-transferase activities in PC, and palm oil upregulated GPx activity in PI. The PL diet triggered LPO levels in the PI, and RPL-fed fish showed the highest levels of LPO in the PC due to lower antioxidant activities, while RL-fed fish presented the best oxidative status. The results suggest that the dietary amount of n-6 and the unsaturated/saturated fatty acids ratio are factors to be considered in aquafeed formulation, including VOs, to improve the intestinal oxidative status in fish.
Full article
(This article belongs to the Section Nutrition and Feeding)
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Open AccessArticle
Protective Effects of Long Double-Stranded RNA with Different CpG Motifs against Miamiensis avidus and Viral Hemorrhagic Septicemia Virus (VHSV) Infections in Olive Flounder (Paralichthys olivaceus)
by
Hee-Jae Choi, Da-Yeon Choi, Jung-Jin Park, Hye Jin Jung, Bo-Seong Kim, Sung-Chul Hong, Jun-Hwan Kim and Yue Jai Kang
Fishes 2024, 9(6), 227; https://doi.org/10.3390/fishes9060227 - 13 Jun 2024
Abstract
The South Korean aquaculture industry has incurred considerable production losses due to various infectious diseases. Artificially synthesized polyinosinic–polycytidylic acid (poly I:C), structurally similar to double-stranded RNA (dsRNA) and cytidine–phosphate–guanosine oligodeoxynucleotides, can enhance immune responses and protect against diseases. Here, we investigated dsRNA molecules
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The South Korean aquaculture industry has incurred considerable production losses due to various infectious diseases. Artificially synthesized polyinosinic–polycytidylic acid (poly I:C), structurally similar to double-stranded RNA (dsRNA) and cytidine–phosphate–guanosine oligodeoxynucleotides, can enhance immune responses and protect against diseases. Here, we investigated dsRNA molecules with different cytidine–phosphate–guanosine (CpG) motifs (dsRNA-CpGMix) as fused agents to treat Miamiensis avidus and viral hemorrhagic septicemia virus (VHSV) infection in olive flounders. We further investigated the efficacy of specific sequence motifs in dsRNA in modulating immunostimulatory effects. Fish treated with poly I:C or dsRNA-CpGMix exhibited higher survival rates than the control group. Olive flounder leukocytes stimulated with poly I:C or dsRNA-CpGMix showed increased scuticocidal activity in the presence of inactivated immune sera. dsRNA with CpG motif sequences induced higher resistance against M. avidus and VHSV infections than dsRNA without CpG motif sequences, and the dsRNA-CpGMix group showed upregulated ISG15 or Mx compared to the dsRNA-GFP group. Thus, dsRNA containing CpG motifs can be used as effective immunostimulants to enhance resistance against viral and parasitic diseases in olive flounder. The specific sequences of the CpG motifs in dsRNA may be important for enhancing immune responses and resistance against M. avidus and VHSV infections in olive flounders.
Full article
(This article belongs to the Section Fish Pathology and Parasitology)
Open AccessArticle
Effects of Various Photoperiods and Specific Wavelengths on Retinal Changes and Oxidative Stress in the Conch Tegula rustica
by
Jin Ah Song, Heung-Sik Park, Yun-Hwan Jung, Dong Mun Choi, Cheol Young Choi and Dae-Won Lee
Fishes 2024, 9(6), 226; https://doi.org/10.3390/fishes9060226 - 13 Jun 2024
Abstract
To improve aquaculture practices and husbandry of a variety of gastropods, including small conch species, it is necessary to study the physiological and endocrinological responses of nocturnal conches to light exposure. In this study, we investigated the effect of the light environment on
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To improve aquaculture practices and husbandry of a variety of gastropods, including small conch species, it is necessary to study the physiological and endocrinological responses of nocturnal conches to light exposure. In this study, we investigated the effect of the light environment on Tegula rustica by exposing it to contrasting light conditions and observing histological changes in the retina and oxidative stress according to photoperiod and light wavelength. We confirmed that the pigment layer was significantly thicker in the group irradiated with light for 24 h (LL), but that its thickness did not differ significantly with light wavelength. Additionally, light wavelength changes did not cause a significant change in H2O2 concentration until 5 days after the change in the light environment. However, a significantly higher H2O2 concentration was observed in the LL test group on the eighth day compared with the other experimental groups. And a significantly higher total antioxidant capacity and malondialdehyde (MDA) were observed in the LL group on the third day compared with the other experimental groups. Our results indicate that the light environment affects the reaction of conches and that continuous light has a stronger effect on the thickness of the pigment layer than the light wavelength. In addition, continuous light irradiation induces excessive ROS and causes oxidative stress. These results can also be provided as basic data for husbandry when aquaculturing gastropods.
Full article
(This article belongs to the Section Aquatic Invertebrates)
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Open AccessArticle
The Establishment of the Multi-Visual Loop-Mediated Isothermal Amplification Method for the Rapid Detection of Vibrio harveyi, Vibrio parahaemolyticus, and Singapore grouper iridovirus
by
Tao Li, Ronggang Ding, Jing Zhang, Yongcan Zhou, Chunsheng Liu, Zhenjie Cao and Yun Sun
Fishes 2024, 9(6), 225; https://doi.org/10.3390/fishes9060225 - 13 Jun 2024
Abstract
Abstract: Groupers are valuable economic fish in the southern sea area of China, but the threat of disease is becoming more and more serious. Vibrio harveyi, V. parahaemolyticus, and Singapore grouper iridovirus (SGIV) are three important pathogens that cause disease
[...] Read more.
Abstract: Groupers are valuable economic fish in the southern sea area of China, but the threat of disease is becoming more and more serious. Vibrio harveyi, V. parahaemolyticus, and Singapore grouper iridovirus (SGIV) are three important pathogens that cause disease in groupers, and infection with either a single one or a mix of these pathogens poses a serious threat to the healthy development of grouper culture. To enhance the rapid diagnosis and screening in the early stages, it is necessary to develop rapid detection methods of these pathogens. To simultaneously and rapidly detect the three pathogens, in this study, we utilized the TolC of V. harveyi, DNAJ of V. parahaemolyticus, and RAD2 of SGIV as the target genes and established a triple visual loop-mediated isothermal amplification (LAMP) method. This LAMP method showed a detection time as fast as 30 min and a high sensitivity of 100 fg/μL. Moreover, this method exhibited strong specificity and no cross-reaction with seven types of Vibrio and Staphylococcus aureus, as well as five common viruses in aquatic animals. Then, the LAMP products were enzymically cut, and three characteristic strips were used to identify the pathogen species. The results of the clinical trials demonstrated that the method could accurately and specifically detect V. harveyi, V. parahaemolyticus, and SGIV in grouper tissues. In summary, this study successfully established a triple visual LAMP rapid detection method for V. harveyi, V. parahaemolyticus, and SGIV. The method offers several advantages including simple equipment, easy operation, rapid reaction, high specificity, high sensitivity, and visual results. It is suitable for the early and rapid diagnosis of groupers infected with V. harveyi, V. parahaemolyticus, and SGIV, thereby providing useful technical support for further application in the large-scale disease surveillance of aquaculture animals.
Full article
(This article belongs to the Special Issue Fish Diseases Diagnostics and Prevention in Aquaculture)
Open AccessArticle
Quantitative Assessment and Analysis of Fish Behavior in Closed Systems Using Information Entropy
by
Minoru Kadota, Shinsuke Torisawa and Tsutomu Takagi
Fishes 2024, 9(6), 224; https://doi.org/10.3390/fishes9060224 - 12 Jun 2024
Abstract
This study introduces a method for quantitatively assessing the complexity and predictability of fish behavior in closed systems through the application of information entropy, offering a novel lens through which to understand how fish adapt to environmental changes. Utilizing simulations rooted in a
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This study introduces a method for quantitatively assessing the complexity and predictability of fish behavior in closed systems through the application of information entropy, offering a novel lens through which to understand how fish adapt to environmental changes. Utilizing simulations rooted in a random walk model for fish movement, we delve into entropy fluctuations under varying environmental conditions, including responses to feeding and external stimuli. Our findings underscore the utility of information entropy in capturing the intricacies of fish behavior, particularly highlighting the synchrony in collective actions and adaptations to environmental shifts. This research not only broadens our comprehension of fish behavior but also paves the way for its application in fields like aquaculture and resource management. Through our analysis, we discovered that smaller grid sizes in simulations capture detailed local fluctuations, while larger grids elucidate general trends, pinpointing a 2.5 grid as optimal for our study. Moreover, changes in swimming speeds and behavioral adaptations during feeding were quantitatively analyzed, with results illustrating significant behavior modifications. Additionally, employing a Gaussian mixture model helped to clarify the nuanced changes in fish behavior in response to altered light conditions, demonstrating the layered complexity of fish responses to environmental stimuli. This investigation confirms the efficacy of information entropy as a robust metric for evaluating fish shoal behavior, offering a fresh methodology for ecological and environmental studies, with promising implications for sustainable management practices.
Full article
(This article belongs to the Special Issue New Technologies for Improving Fisheries and Aquaculture Production and Management)
Open AccessArticle
Flood Pulse Effects on the Growth of Pseudoplatystoma fasciatum in the Amazon Basin
by
Luciana Alves Pereira, Leandro Castello, Eric Hallerman, Edson Rubens Ferreira Rodrigues, Carolina Rodrigues da Costa Doria and Fabrice Duponchelle
Fishes 2024, 9(6), 223; https://doi.org/10.3390/fishes9060223 - 12 Jun 2024
Abstract
Fish growth is a fundamental biological process driven by a multitude of intrinsic (within-individual) and extrinsic (environmental) factors that underpin individual fitness and population dynamics. Interannual variability in river hydrology regarding the intensity and duration of floods and droughts can induce interannual variations
[...] Read more.
Fish growth is a fundamental biological process driven by a multitude of intrinsic (within-individual) and extrinsic (environmental) factors that underpin individual fitness and population dynamics. Interannual variability in river hydrology regarding the intensity and duration of floods and droughts can induce interannual variations in the biotic and abiotic variables that regulate fish growth. However, the understanding of how interannual variability in river hydrology affects fish growth remains limited for most species and ecosystems. We evaluated how inter-annual hydrological variations within the Amazon River basin influence the growth of the catfish Pseudoplaystoma fasciatum. Our research questions were as follows: Do floods lead to the faster growth of P. fasciatum and droughts lead to the slower growth? And do floods and droughts affect all age classes in the same manner? We sampled 364 specimens of P. fasciatum from five sites in the Amazon basin, estimated their growth rates, and related the growth rates to indices of the intensity of floods and droughts. We fitted linear mixed-effects models to test the relationship between growth increments and hydrological indices (with F and D quantifying the intensities of floods and droughts, respectively), age as fixed effects, and basins and Fish ID as random effects. We found an inverse relationship between the increment width in the fish hard parts and hydrological indices. That is, intense floods and droughts negatively affected the growth rates. We also found that the growth of P. fasciatum was no different in years with intense and mild floods across age classes 1–5, although was different for age class 6. However, the growth of P. fasciatum was faster in years of mild droughts for all age classes. Our results showing that the growth of P. fasciatum was slower in years of intense droughts are supported by those of previous studies in the Amazon basin and elsewhere. However, our results showing for the first time that the growth of P. fasciatum is slower in years of intense flooding is the opposite of patterns found in other studies. These results thus suggest that the growth of P. fasciatum is maximized within an optimum range of hydrological conditions, where neither floods nor droughts are intense.
Full article
(This article belongs to the Section Biology and Ecology)
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Open AccessArticle
Functional Alpha and Beta Diversity of Fish Communities and Their Relationship with Environmental Factors in the Huanghe River (Yellow River) Estuary and Adjacent Seas, China
by
Shaowen Li, Yufang Huang, Fan Li, Yanfen Liu, Hongliang Ma, Xiaomin Zhang, Xiuxia Wang, Wei Chen, Guangxin Cui and Tiantian Wang
Fishes 2024, 9(6), 222; https://doi.org/10.3390/fishes9060222 - 12 Jun 2024
Abstract
Fisheries and bottom seawater data were collected in July in 2022 and 2023 from 15 sampling stations in the Huanghe River estuary and adjacent seas in China. The patterns of functional alpha and beta diversity of fish communities in this area and their
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Fisheries and bottom seawater data were collected in July in 2022 and 2023 from 15 sampling stations in the Huanghe River estuary and adjacent seas in China. The patterns of functional alpha and beta diversity of fish communities in this area and their relationships with environmental factors were studied using trait-based analysis. Five functional classifications, which included 16 functional traits, four functional alpha diversity indices (functional richness, functional evenness, functional divergence, and community-weighted mean), three functional beta diversity indices (functional beta diversity and its turnover and nestedness components), and 14 bottom environmental factors were considered. The dominant traits of fish communities were the following: benthivorous feeding habits, small and front-facing mouths, high trophic level, demersal, anguilliform, low growth coefficient, medium resilience, low vulnerability, and adapted to warm temperate conditions. The dominant migration traits and types of fish eggs varied by year, and fish abundance was the main factor affecting the dominant traits of the communities. The results of multiple regression on distance matrices and variance partitioning analysis indicated that ammonia nitrogen content, total phosphorus content, and pH were the main environmental factors that affected fish functional diversity. The N/P ratio had a bottom-up control effect on fish functional diversity. Our findings also revealed that high pH gradients and distant geographical distances can inhibit trait turnover in fish communities.
Full article
(This article belongs to the Special Issue Biodiversity and Spatial Distribution of Fishes)
Open AccessArticle
Contemporary Trends in the Spatial Extent of Common Riverine Fish Species in Australia’s Murray–Darling Basin
by
Wayne Robinson, John Koehn and Mark Lintermans
Fishes 2024, 9(6), 221; https://doi.org/10.3390/fishes9060221 - 12 Jun 2024
Abstract
As one of the world’s most regulated river basins, the semi-arid Murray–Darling Basin (MDB) in south-eastern Australia is considered at high ecological risk, with substantial declines in native fish populations already identified and climate change threats looming. This places great importance on the
[...] Read more.
As one of the world’s most regulated river basins, the semi-arid Murray–Darling Basin (MDB) in south-eastern Australia is considered at high ecological risk, with substantial declines in native fish populations already identified and climate change threats looming. This places great importance on the collection and use of data to document population trends over large spatial extents, inform management decisions, and provide baselines from which change can be measured. We used two medium-term data sets (10 MDB basin-wide fish surveys from 2004–2022) covering the 23 catchments and 68 sub-catchments of the MDB to investigate trends in the distribution of common riverine species at the entire basin scale. Fifteen native species were analysed for changes in their contemporary range, and whilst short-term changes were identified, all species showed no significant continuous trend over the study period. We further analysed the native species extent relative to their historic records, with bony herring and golden perch occurring in 78% and 68% of their historic river kilometres, respectively, whereas southern pygmy perch, northern river blackfish, silver perch, mountain galaxias, and freshwater catfish were all estimated to occur in less than 10% of their historic extent. Six established non-native species were also analysed and were very consistent in extent over the years, suggesting that they are near the available limits of expansion of their invasion. We provide effect sizes for the spatial extent index which can be used as baselines for future studies, especially those aiming to monitor changes in the spatial extent and population status of native species, or changes in the spatial extent of new or existing non-native species.
Full article
(This article belongs to the Special Issue Biomonitoring and Conservation of Freshwater & Marine Fishes)
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Open AccessReview
Harnessing Hue: Advances and Applications of Fish Skin Pigmentation Genetics in Aquaculture
by
Jialong Liu, Miaomiao Yin, Zhi Ye, Jingjie Hu and Zhenmin Bao
Fishes 2024, 9(6), 220; https://doi.org/10.3390/fishes9060220 - 10 Jun 2024
Abstract
Fish exhibit a broad spectrum of colors and patterns facilitated by specialized cells known as chromatophores. The vibrant coloration of fish, controlled by complex genetic and environmental interactions, serves critical roles in ecological functions such as mating, predation, and camouflage. This diversity not
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Fish exhibit a broad spectrum of colors and patterns facilitated by specialized cells known as chromatophores. The vibrant coloration of fish, controlled by complex genetic and environmental interactions, serves critical roles in ecological functions such as mating, predation, and camouflage. This diversity not only makes fish an invaluable model for exploring the molecular mechanisms of pigmentation but also significantly impacts their economic value within the aquaculture industry, where color traits can drive marketability and breeding choices. This review delves into the sophisticated biological processes governing fish pigmentation and discusses their applications in enhancing aquaculture practices. By exploring the intersection of genetic regulation, environmental influences, and advanced breeding techniques, this review highlights both the scientific understanding and practical applications of fish coloration, providing a bridge between basic biological research and its application in commercial aquaculture.
Full article
(This article belongs to the Special Issue Genetic Breeding and Developmental Biology of Aquaculture Animals)
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Open AccessArticle
Evaluating the Use of Grape Pomace in Cyprinus carpio Nutrition: Effects on Growth, Biochemistry, Meat Quality, Microbiota, and Oxidative Status
by
Cristian-Alin Barbacariu, Lenuța Dîrvariu, Dana Andreea Șerban, Cristina Mihaela Rîmbu, Cristina Elena Horhogea, Gabriela Dumitru, Elena Todirașcu-Ciornea, Constantin Lungoci and Marian Burducea
Fishes 2024, 9(6), 219; https://doi.org/10.3390/fishes9060219 - 7 Jun 2024
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This study investigated the effects of incorporating grape pomace (GP) into fish diets on the growth performance, physiological parameters, and biochemical composition of carp (Cyprinus carpio L.). A total of 180 carp, with an average initial weight of 65 g, were reared
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This study investigated the effects of incorporating grape pomace (GP) into fish diets on the growth performance, physiological parameters, and biochemical composition of carp (Cyprinus carpio L.). A total of 180 carp, with an average initial weight of 65 g, were reared in a recirculating aquaculture system (RAS). They were divided into a control group (C), fed with a diet containing 0% GP, and two experimental groups (V1 and V2), fed with diets containing 5% and 10% GP, respectively. The experiment lasted for eight weeks. Results revealed that most growth parameters were not significantly affected by GP inclusion, except for a notable difference in the hepatosomatic index (HSI), indicating an impact on liver size relative to body weight. The biochemical analysis of carp meat showed significant differences in moisture, protein, fat, collagen, and salt content between the control and experimental groups. Furthermore, the oxidative status assessment indicated that GP supplementation modulates oxidative stress and lipid peroxidation pathways in carp, enhancing their antioxidant defenses and overall health. Microbiological examination of the carp intestinal content showed that GP inclusion in fish diets influenced microbial parameters, particularly affecting the abundance of aerobic germs and Enterobacteriaceae.
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Open AccessArticle
Blood-Chemistry Parameters Comparison among Different Age Stages of Chinese Sturgeon Acipenser sinensis
by
Zhaowen Chen, Yueping Zheng, Kaile Ji, Yueyong Shang, Youji Wang and Menghong Hu
Fishes 2024, 9(6), 218; https://doi.org/10.3390/fishes9060218 - 7 Jun 2024
Abstract
The Chinese sturgeon (Acipenser sinensis), a critically endangered migratory fish native to the Yangtze River estuary, is experiencing alarming population declines. Understanding the physiological and biochemical profiles of this species is paramount for its conservation. However, due to limited sample availability, blood
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The Chinese sturgeon (Acipenser sinensis), a critically endangered migratory fish native to the Yangtze River estuary, is experiencing alarming population declines. Understanding the physiological and biochemical profiles of this species is paramount for its conservation. However, due to limited sample availability, blood biochemical parameters have remained understudied. In this study, we examined blood chemistry in artificially cultured Chinese sturgeon ranging from 2 to 15 years of age. Our results revealed age-related trends: total protein (TP), albumin (ALB), globulin (GLO), total cholesterol (CHOL), high-density lipoprotein (HDL), low-density lipoprotein (LDL), estrogen (E2), testosterone (T), testosterone undecanoate (11-KT), and red blood cell count (RBC) increased with age, while glucose (GLU), uric acid (UA), and serum creatinine (CREA) decreased. Levels of C-reactive protein (CRP) declined from 3 to 7 years but rose from 8 to 15 years. Blood parameters showed stabilization with age, indicating enhanced resilience and immunity. Significant alterations in parameters at ages 2–3 and 14–15 suggest critical developmental stages. These findings are crucial for understanding sturgeon growth, development, migration, and reproduction, underscoring the necessity for targeted conservation efforts during pivotal life stages.
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(This article belongs to the Section Physiology and Biochemistry)
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Graphical abstract
Open AccessArticle
Frequency-Specific Responses: The Impact of an Acoustic Stimulus on Behavioral and Physiological Indices in Large Yellow Croaker
by
Xiaojie Cui, Pengxiang Xu, Tao Tian, Mingyuan Song, Xuyang Qin, Dehua Gong, Yan Wang, Xuguang Zhang, Binbin Xing, Mingzhi Li and Leiming Yin
Fishes 2024, 9(6), 217; https://doi.org/10.3390/fishes9060217 - 7 Jun 2024
Abstract
This study assessed the impact of an acoustic stimulus on the behavioral responses and physiological states of the large yellow croaker (Larimichthys crocea). The test fish, with an average body weight of approximately 352.81 ± 70.99 g, were exposed to one
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This study assessed the impact of an acoustic stimulus on the behavioral responses and physiological states of the large yellow croaker (Larimichthys crocea). The test fish, with an average body weight of approximately 352.81 ± 70.99 g, were exposed to one hour of acoustic stimulation at seven different frequencies: 100 Hz, 125 Hz, 160 Hz, 200 Hz, 500 Hz, 630 Hz, and 800 Hz. The aim was to delineate the specific effects of acoustic stimulation on the behavior and physiological indices. The results show that acoustic stimulation significantly altered the behavioral patterns of the large yellow croaker, predominantly manifested as avoidance behavior towards the sound source. At a stimulus frequency of 630 Hz, the test fish exhibited continuous irregular motion and erratic swimming. Physiologically, one hour of exposure to acoustic stimulation notably affected the endocrine system. The levels of Epinephrine and thyroxine were significantly elevated at 200 Hz, while the cortisol levels did not show significant differences. Additionally, the lactic acid content significantly increased at 800 Hz, and the blood glucose content peaked at 630 Hz. This study discovered that sound frequencies of 200 Hz, 630 Hz, and 800 Hz led to a significant increase in the levels of Epinephrine, glucose, thyroid hormones, and lactate in large yellow croaker, consequently affecting their behavior. The changes in these physiological indicators reflect the stress response of the large yellow croaker in specific sonic environments, providing crucial insights into the physiological and behavioral responses of fish to acoustic stimuli.
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(This article belongs to the Special Issue Assessment and Management of Fishery Resources)
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Graphical abstract
Open AccessArticle
Poststocking Behavior and Survival of Large Yearling Muskellunge (Esox masquinongy) in Two Northern Iowa Natural Lakes
by
Jonathan R. Meerbeek
Fishes 2024, 9(6), 216; https://doi.org/10.3390/fishes9060216 - 6 Jun 2024
Abstract
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Muskellunge are commonly stocked to maintain populations throughout much of North America. Poststocking survival is variable, and many jurisdictions are experimenting with stocking Muskellunge at advanced life stages (e.g., yearlings) or sizes to promote more consistent recruitment within populations. Yet, little is known
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Muskellunge are commonly stocked to maintain populations throughout much of North America. Poststocking survival is variable, and many jurisdictions are experimenting with stocking Muskellunge at advanced life stages (e.g., yearlings) or sizes to promote more consistent recruitment within populations. Yet, little is known about short-term poststocking behavior or survival of Muskellunge in natural lakes or if stocking larger fish results in improved poststocking survival. Radiotelemetry was used to evaluate the behavior and survival of large (mean of 418 mm; standard error of 3.4) spring-stocked yearling Muskellunge in two northern Iowa natural lakes of varying biotic and abiotic complexity. Hatchery-reared Muskellunge were fitted with radio transmitters (n = 10–15 fish/lake), stocked in each lake with conspecifics, and tracked either daily or weekly up to 112 days poststocking. Telemetry data were used to evaluate dispersal and movement, depth and vegetation use, proximity to shore, and survival. In both lakes, fish dispersed rapidly from each stocking site. Movement among lakes was similar and peaked during the first week poststocking and declined thereafter. Muskellunge were frequently located in offshore habitats in both lakes, but both depth and vegetation use varied among lakes and weeks poststocking, with Muskellunge found in deeper, more vegetated habitats in the larger, more complex natural lake. Muskellunge in both systems had high poststocking survival (86.7–90.0%). The results of this study provide managers with more information regarding yearling Muskellunge poststocking behavior and survival and indicate that larger fish may be a suitable alternative for fisheries where high poststocking mortality may be acting as a bottleneck for maintaining quality Muskellunge fisheries.
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Open AccessArticle
DNA Barcoding Revealed Mislabeling of Imported Seafood Products in Thailand
by
Deep Nithun Senathipathi, Soottawat Benjakul, Phutthipong Sukkapat, Matsapume Detcharoen, Gururaj Moorthy and Jirakrit Saetang
Fishes 2024, 9(6), 215; https://doi.org/10.3390/fishes9060215 - 5 Jun 2024
Abstract
Seafood mislabeling threatens customer rights and causes economic loss worldwide. The information on seafood misrepresentation in Thailand is still lacking, and the investigation and monitoring program must be well established. This study investigated the mislabeling status of imported seafood in Thailand using the
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Seafood mislabeling threatens customer rights and causes economic loss worldwide. The information on seafood misrepresentation in Thailand is still lacking, and the investigation and monitoring program must be well established. This study investigated the mislabeling status of imported seafood in Thailand using the DNA barcoding technique. A total of 45 imported seafood products from five distributors were included. Scientific, common, local, and market names of seafood samples were obtained from FAO and Fishbase databases. DNA was extracted, and PCR was performed using a universal primer targeting the COI gene. Species of each sample were identified with over 98% similarity based on COI sequence analysis. DNA sequence revealed 11 mislabeled samples. Among substituted species, Pangasianodon hypophthalmus and Thunnus maccoyii were found to be endangered species according to IUCN status. Products obtained from Brand-C showed the highest mislabeling rate (42.85%). The phylogenetic analysis adopted with the TIM2+F+I+G4 model showed the sequenced DNA similar to the NCBI database reference sequence. Overall, mislabeled products of imported seafood were found at the rate of 24.44%, suggesting that strict surveillance for seafood substitution should be implemented in Thailand.
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(This article belongs to the Special Issue Trends and Advances in Seafood Quality: Processing, Preservation and Safety Processes to Guarantee Food Value)
Open AccessArticle
Dazl and dnd Identify Both Embryonic and Gonadal Germ Cells in Chinese Hook Snout Carp (Opsariichthys bidens)
by
Zifeng Yin, Lingzhan Xue, Peng Song, Muhammad Jawad, Cong Xu, Weishao Bu and Mingyou Li
Fishes 2024, 9(6), 214; https://doi.org/10.3390/fishes9060214 - 5 Jun 2024
Abstract
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In recent years, the Chinese hook snout carp (Opsariichthys bidens) is becoming increasingly popular due to its high nutritional value and delicious taste. However, anthropogenic influences have caused a rapid reduction in its population. Considering long-term development sustainability, it is essential
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In recent years, the Chinese hook snout carp (Opsariichthys bidens) is becoming increasingly popular due to its high nutritional value and delicious taste. However, anthropogenic influences have caused a rapid reduction in its population. Considering long-term development sustainability, it is essential to conduct research on its reproductive development. In this study, the germ-cell related genes dazl (Obdazl) and dnd (Obdnd) were cloned, and their expression patterns were revealed. RT-PCR analysis indicated that Obdazl and Obdnd were specifically expressed in gonads. In the testis, Obdazl and Obdnd RNAs have a similar expression pattern: their transcripts were abundant in spermatogonia, gradually decreased, and eventually disappeared during spermatogenesis. Early oocytes in the ovary exhibited strong expression of Obdazl and Obdnd RNAs and reduced remarkably after peak expression at III oocytes. Surprisingly, Obdazl RNA was dynamically found in perinuclear spots that finally aggregated into the Balbiani body (Bb) in the early oocytes. Moreover, Obdazl 3′ UTR enabled the reporter gene to be expressed stably in medaka PGCs, suggesting that dazl was identified as the germ cell marker in O. bidens, which may provide perspectives for further studies on the development of PGCs in the future.
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Open AccessCommunication
Morphological Development and DNA Barcoding Identification of Pholis fangi Larvae and Juveniles in the Yellow Sea
by
Shouhai Liu, Haijing Zhang, Xiao Ji, Xiaojia Peng, Yutao Qin and Weimin Yao
Fishes 2024, 9(6), 213; https://doi.org/10.3390/fishes9060213 - 3 Jun 2024
Abstract
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Pholis fangi is a small, bottom-dwelling fish species endemic to the Yellow Sea and Bohai Sea in China. While previous research has focused on its population biology and molecular structure, little is known about the early developmental stages of this species. In this
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Pholis fangi is a small, bottom-dwelling fish species endemic to the Yellow Sea and Bohai Sea in China. While previous research has focused on its population biology and molecular structure, little is known about the early developmental stages of this species. In this study, larval and juvenile P. fangi specimens were collected from the Sheyang Sea Area, Jiangsu Province, in 2017. Morphological features were examined using microscopy, and DNA barcoding was conducted to confirm species identification. The research documented detailed changes in yolk sac, fin development, and melanophore distribution patterns across larval and juvenile stages of P. fangi. Comparative analysis with other Pholis species revealed that melanophore distribution is a key distinguishing characteristic, allowing effective differentiation between larval and juvenile stages, as well as between Pholis species. This study provides valuable insights into the early life history of P. fangi, contributing to a better understanding of the genus Pholis. The findings demonstrate the utility of combining traditional morphological observation and molecular techniques for accurate species identification, particularly during the critical larval and juvenile developmental phases.
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