Special Issues

Microorganisms publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic. The journal’s Editor-in-Chief and/or designated EBM will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Genomics of Marine and Aquatic Bacteria: A Focus on Novel Taxa, Diversity and Biotechnological Potential 2.0
edited by Alexander Machado Cardoso
submission deadline 15 Sep 2024 | 1 articles | Viewed by 330 | Submission Open
Keywords: bacteria; diversity; bacterial communities; novel taxa; phylogeny; genome analysis; marine and aquatic environments
(This special issue belongs to the Section Environmental Microbiology)
Exploring the Impact of Beneficial Plant-Associated Microbes on Host Plants
edited by
submission deadline 15 Sep 2024 | Viewed by 161 | Submission Open
Keywords: mechanisms of nutrient exchange and metabolic interactions; modulation of plant defense responses; abiotic stress tolerance enhancement; bioactive compounds production and applications; ecological dynamics of beneficial plant-associated microbial communities; microbes enhancing photosynthesis in association with plants; nitrogen fixation by beneficial plant-associated microbes (emphasis on monocots)
(This special issue belongs to the Section Plant Microbe Interactions)
Fermented Treasures: Exploring Tradition and Innovation in Traditional Foods submission deadline 15 Sep 2024 | Viewed by 111 | Submission Open
Keywords: traditional products; fermentation; authocthonous microbiota; microbiology; microbial diversity; food preservation; probiotics; metabolic activities; nutritional composition; health benefits
(This special issue belongs to the Section Food Microbiology)
Antimicrobial Resistance in Enterobacteriaceae and Enterococci
edited by
submission deadline 15 Sep 2024 | Viewed by 102 | Submission Open
Keywords: molecular mechanisms of resistance; clinical implications; epidemiology; outbreak; global health One Health; antibiotic resistance; public health; environment
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Pathobiology, Infection Biology and Control of Protozoan Parasites—the ONE HEALTH Approach
edited by , and Susana R. Sousa
submission deadline 15 Sep 2024 | Viewed by 96 | Submission Open
Keywords: protozoan parasites; host– parasite interactions; pathobiology; disease control; ONE HEALTH
(This special issue belongs to the Section Parasitology)
Advance Research on Bacterial Biofilm
edited by
submission deadline 20 Sep 2024 | 9 articles | Viewed by 13701 | Submission Open
Keywords: bacterial biofilm; genetic; antibiofilm
(This special issue belongs to the Section Biofilm)
The Role of Microbiota in Upper and Lower Gastrointestinal Functional Disorders submission deadline 30 Sep 2024 | 6 articles | Viewed by 15933 | Submission Open
Keywords: microbiota; microbiome; mycoma; viroma; bacterium; fungi; protozoa; FGID; gastroparesis; functional dyspepsia; functional constipation; irritable bowel syndrome
(This special issue belongs to the Section Gut Microbiota)
Immunotoxic Factors Promoting Infectious Diseases in Cultured Marine Animals
edited by
submission deadline 30 Sep 2024 | 8 articles | Viewed by 11017 | Submission Open
Keywords: adverse environmental factors; environmental contaminants; disease caused by microbial infection; regulation mechanism
(This special issue belongs to the Section Veterinary Microbiology)
Probiotics, Prebiotics, and Gut Microbes
edited by
submission deadline 30 Sep 2024 | 10 articles | Viewed by 10410 | Submission Open
Keywords: probiotics; prebiotics; gut microbes; host health
(This special issue belongs to the Section Gut Microbiota)
Advances in Bacterial Genetics submission deadline 30 Sep 2024 | 4 articles | Viewed by 9898 | Submission Open
Keywords: bacterial genetics; environmental adaptation; gene and genome evolution; regulatory networks; host microbiome; bacterial interactions; biotechnology; bioinformatics
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Adeno-Associated Virus Biology and AAV Vector-Mediated Gene Therapy submission deadline 30 Sep 2024 | 4 articles | Viewed by 9534 | Submission Open
Keywords: gene therapy; adeno-associated virus; recombinant AAV; natural capsid variants; vector design; production methods; analytics; epigenetics; evolutionary biology
(This special issue belongs to the Section Virology)
Antimicrobial Properties of Nanoparticle submission deadline 30 Sep 2024 | 7 articles | Viewed by 8087 | Submission Open
Keywords: nanoparticles; nanomaterials; antiviral; antimicrobial; drug-delivery
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Bioactive Molecules from Microbial Sources submission deadline 30 Sep 2024 | 3 articles | Viewed by 7287 | Submission Open
Keywords: bioactive molecules; microorganisms; fungi; microalgae; application
(This special issue belongs to the Section Microbial Biotechnology)
Soil Health and Plant-Microbiome-Bioeffectors Relationship in Sustainable Agriculture submission deadline 30 Sep 2024 | 6 articles | Viewed by 7205 | Submission Open
Keywords: plant-associated microbiome; plant– microbiome bioeffectors; microbial diversity; soil health; sustainable agriculture; circular bioeconomy
(This special issue belongs to the Section Environmental Microbiology)
Function and Responses of Algae to Wastewater Treatment
edited by Erica L. Seubert
submission deadline 30 Sep 2024 | Viewed by 6810 | Submission Open
Keywords: algae; microalgae; wastewater treatment; sustainability
(This special issue belongs to the Section Environmental Microbiology)
Emerging Pathogens in the Context of One Health
edited by Michelle L. Gordon and
submission deadline 30 Sep 2024 | 6 articles | Viewed by 6494 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Transcriptional Regulation in Bacteria
edited by
submission deadline 30 Sep 2024 | 6 articles | Viewed by 6327 | Submission Open
Keywords: transcription; gene regulation; genome regulation; regulatory network; RNA polymerase; sigma factor; transcription factor; nucleoid
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Endophytes for Managing Biotic and Abiotic Stress in Plants 2.0 submission deadline 30 Sep 2024 | 3 articles | Viewed by 6238 | Submission Open
(This special issue belongs to the Section Plant Microbe Interactions)
Oral Microbes and Human Health submission deadline 30 Sep 2024 | 3 articles | Viewed by 4853 | Submission Open
Keywords: oral; microbiota; health
(This special issue belongs to the Section Medical Microbiology)
Shiga-Toxin Producing Escherichia coli and the Animal Host
edited by
submission deadline 30 Sep 2024 | 3 articles | Viewed by 4662 | Submission Open
Keywords: E. coli; STEC; animal-host; interaction; colonization; pathogenicity; diagnosis; prevention; therapy; alternatives
(This special issue belongs to the Section Medical Microbiology)
Borreliosis and Other Tick-Borne Diseases in the Northern and Southern Hemispheres
edited by
submission deadline 30 Sep 2024 | 4 articles | Viewed by 4551 | Submission Open
Keywords: lyme disease; borrelia; diagnosis; tick-borne infections; relapsing fever
(This special issue belongs to the Section Parasitology)
Plant Pathogens: Monitoring, Identification and Biological Control submission deadline 30 Sep 2024 | 4 articles | Viewed by 4483 | Submission Open
(This special issue belongs to the Section Plant Microbe Interactions)
Photosynthetic Microorganisms: Culturing and Biotechnological Applications submission deadline 30 Sep 2024 | 3 articles | Viewed by 3982 | Submission Open
Keywords: bioenergy; environmental sustainability; biohydrogen production; renewable energy; bioplastic production; cell culture; photofermentation; immobilization; bioremediation; biotechnology; environment; microalgae; immobilization; photobioreactors; culture system; biofuels; cyanobacteria; purple bacteria; biomass productivity; light conversion efficiency
(This special issue belongs to the Section Microbial Biotechnology)
Plant Pathogenic Fungi: Genetics and Genomics submission deadline 30 Sep 2024 | 3 articles | Viewed by 3556 | Submission Open
Keywords: fungal– plant interactions; genomics; metabolomics; pathogenicity; proteomics; transcriptomics
(This special issue belongs to the Section Plant Microbe Interactions)
Advances in Medical Microbiology
edited by
submission deadline 30 Sep 2024 | 5 articles | Viewed by 3440 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Medical Microbiology 2024 submission deadline 30 Sep 2024 | 1 articles | Viewed by 3244 | Submission Open
Keywords: review papers; medical microbiology; infectious diseases
(This special issue belongs to the Section Medical Microbiology)
Plant and Human Probiotics: Consequences on the Autochthonous Microbiota submission deadline 30 Sep 2024 | 1 articles | Viewed by 3194 | Submission Open
Keywords: plant microbiome; plant-microbe interactions; human microbiome; gut microflora; resident microflora
(This special issue belongs to the Section Food Microbiology)
Using Microorganisms to Increase Crop Productivity and Sustainability
edited by Cristina Cruz and
submission deadline 30 Sep 2024 | 2 articles | Viewed by 3044 | Submission Open
Keywords: microorganism; agriculture; soil; plant; ecosystem
(This special issue belongs to the Section Plant Microbe Interactions)
Molecular Mechanisms of Viral Persistence and Immune Evasion
edited by
submission deadline 30 Sep 2024 | 2 articles | Viewed by 2621 | Submission Open
Keywords: viral persistence; viral immune evasion; viral latency; RNA viruses; DNA viruses; therapeutic targets
(This special issue belongs to the Section Virology)
State-of-the-Art Medical Microbiology in the USA (2023, 2024)
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 2240 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Bacteria and Fungi Probiotics 2.0 submission deadline 30 Sep 2024 | 2 articles | Viewed by 2130 | Submission Open
Keywords: bacteria; fungi; probiotics; antimicrobials; antioxidant; gut microbiota; gut immunomodulation; animal health; human health
(This special issue belongs to the Section Food Microbiology)
Host–Bacteria Interactions in Aquaculture Systems 2.0
edited by
submission deadline 30 Sep 2024 | 2 articles | Viewed by 2102 | Submission Open
Keywords: host– bacteria interactions; microbial communities; aquaculture; aquatic organisms; probiotics
(This special issue belongs to the Section Environmental Microbiology)
Research on Mycorrhizal Fungi
edited by , Marieta Hristozkova and
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1980 | Submission Open
Keywords: mycorrhizal fungi; mycorrhizal symbiosis; plant– microbe interaction; plant nutrition; crop production
(This special issue belongs to the Section Plant Microbe Interactions)
Intestinal Dysbiosis
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1932 | Submission Open
Keywords: gut flora; intestinal flora; dysbiosis; inflammatory bowel diseases; leaky gut
(This special issue belongs to the Section Gut Microbiota)
Microbes at the Root of Solutions for Anthropocene Challenges submission deadline 30 Sep 2024 | 1 articles | Viewed by 1782 | Submission Open
Keywords: plant– microbe interactions; bioremediation; plant– soil feedback; holobiont; sustainability; biodiversity
(This special issue belongs to the Section Plant Microbe Interactions)
Parasitic Diseases in Humans and Animals
edited by Loka Raghu Kumar Penke
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1613 | Submission Open
Keywords: parasitic diseases; Leishmania; Trypanosoma; Dirofilaria; Thelazia; animals and humans
(This special issue belongs to the Section Parasitology)
The One Health Challenge: Zoonotic Parasites
edited by , Maria Luísa Lobo and Maria Wesołowska
submission deadline 30 Sep 2024 | 2 articles | Viewed by 1553 | Submission Open
Keywords: zoonotic parasites; one health; parasitic diseases; host-parasite interactions; epidemiology; zoonoses; vector-borne diseases
(This special issue belongs to the Section Parasitology)
Host Specificity of Microbial Pathogens
edited by Ye Feng
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1544 | Submission Open
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Detection of Pathogenic Microorganism
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1501 | Submission Open
Keywords: emerging bacterial and viral infectious diseases; pathogenic microorganism prevention and detection methods; molecular and biochemical diagnostics; testing and technology ways; diagnostics validation
(This special issue belongs to the Section Microbial Biotechnology)
Gut Microbiome Dynamics: Implications for Methane Emissions and Animal Productivity
edited by and César S. Pinares-Patiño
submission deadline 30 Sep 2024 | 2 articles | Viewed by 1489 | Submission Open
(This special issue belongs to the Section Veterinary Microbiology)
Mechanisms of Mycobacteria Drug Resistance and Impact for Innovative Antimycobacterial Drug Development submission deadline 30 Sep 2024 | 1 articles | Viewed by 1400 | Submission Open
Keywords: Mycobacterium; drug resistance; drug tolerance; metabolic adaptation; biofilm; anti-TB drug development; anti-TB drug target; mycobacterial cell wall; efflux pumps
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Research on Natural Antimicrobial and Antibiofilm Agents
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1396 | Submission Open
Keywords: natural products; antimicrobial agents; antibiofilm agents
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Microbial Applications for Sustainable Resource and Energy Recovery
edited by Yuriy Litti
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1240 | Submission Open
Keywords: anaerobic digestion; dark fermentation; biogas; biorefinery; microbial community; metabolic engineering; biochemicals; chain elongation
(This special issue belongs to the Section Environmental Microbiology)
Molecular Biology of Coronaviruses in Animals
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1142 | Submission Open
Keywords: molecular biology; coronaviruses; animals; birds; One Health
(This special issue belongs to the Section Veterinary Microbiology)
Host Versus Pathogen: Candida Infections, Immune Response and Therapy Perspectives
edited by and Elena Roselletti
submission deadline 30 Sep 2024 | 1 articles | Viewed by 1105 | Submission Open
Keywords: Candida spp.; candidiasis; mucosal infection; invasive infection; innate immune response; adaptive immune response; drug resistance; anti-Candida therapies
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Applied Microbiome Science and Technology submission deadline 30 Sep 2024 | 1 articles | Viewed by 1095 | Submission Open
Keywords: microbiome-host-environment; diagnostics for humans; plants or environments; digital therapeutics for health of humans; plants; or environments
(This special issue belongs to the Section Microbiomes)
ß-Lactamases 3.0
edited by
submission deadline 30 Sep 2024 | 1 articles | Viewed by 884 | Submission Open
Keywords: ß -lactamases; multidrug-resistant bacteria; mobile genetic elements and plasmids; bacterial resistance; antibiotic therapies
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Navigating Novel Viral Challenges: Understanding, Tracking, and Mitigating Emerging Threats submission deadline 30 Sep 2024 | 1 articles | Viewed by 818 | Submission Open
Keywords: emerging viral threats; viral spillover; infectious disease dynamics; surveillance systems; global health security; molecular epidemiology; viral emergence; preparedness and response efforts; interdisciplinary collaborations
(This special issue belongs to the Section Virology)
Microbial Fermentation, Food and Food Sustainability submission deadline 30 Sep 2024 | 2 articles | Viewed by 813 | Submission Open
Keywords: food; production; fermentation; microbial community; bioprocesses
(This special issue belongs to the Section Food Microbiology)
An Update on Listeria monocytogenes 3.0 submission deadline 30 Sep 2024 | 1 articles | Viewed by 664 | Submission Open
Keywords: Listeria monocytogenes; epidemiology; pathogenicity; antibiotic resistance; biofilm formation
(This special issue belongs to the Section Food Microbiology)
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