Special Issues

Microorganisms publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic. The journal’s Editor-in-Chief and/or designated EBM will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Virulence Factors and Antibiotic Resistance of Enterobacterales 3.0 submission deadline 30 Jun 2024 | Viewed by 465 | Submission Open
Keywords: Enterobacterales; virulence factors; antibiotic resistance; biofilm; healthy and sick animals; commensal and pathogenic bacteria
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Microbial Advances in a Sustainable Environment: Biological Waste Treatment and Bioconversion Technology 2.0
edited by , and
submission deadline 30 Jun 2024 | Viewed by 427 | Submission Open
Keywords: sustainable environment; waste treatment; biomass; zero-waste; biodegradation
(This special issue belongs to the Section Microbial Biotechnology)
Microbial Ecosystems in Water and Wastewater Treatment 2.0 submission deadline 30 Jun 2024 | Viewed by 288 | Submission Open
Keywords: microbial community; wastewater treatment plant; water reuse; biodegradation processes; water supply systems; water resource management
(This special issue belongs to the Section Environmental Microbiology)
Active Components of Natural Products as New Antimicrobial Agents
edited by
submission deadline 30 Jun 2024 | Viewed by 214 | Submission Open
Keywords: natural products; antimicrobial agents; active components; bioactive compounds; antimicrobial resistance; drug development
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Recent Advances in Acinetobacter Biology submission deadline 30 Jun 2024 | Viewed by 214 | Submission Open
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
State-of-the-Art Medical Microbiology in Japan (2023, 2024)
edited by and Shiori Kitaya
submission deadline 30 Jun 2024 | Viewed by 197 | Submission Open
(This special issue belongs to the Section Medical Microbiology)
Prevention, Treatment and Diagnosis of Tuberculosis, 2nd Edition
edited by Rogelio Hernández Pando
submission deadline 30 Jun 2024 | Viewed by 193 | Submission Open
Keywords: tuberculosis; anti-TB drugs; therapy; TB vaccines
(This special issue belongs to the Section Public Health Microbiology)
The Current View on Apicomplexan Parasites: Structure, Function, Evolution 2.0
edited by
submission deadline 30 Jun 2024 | Viewed by 122 | Submission Open
Keywords: apicomplexans; apical complex; conoid; apicoplast; aconoidasida; conoidasida; gregarinasina; plasmodium; toxoplasma; host-pathogen interaction; phylogenetics; evolution
(This special issue belongs to the Section Parasitology)
Microbial Communities in Aquatic Habitats Using Omics’ Methods submission deadline 30 Jun 2024 | Viewed by 115 | Submission Open
Keywords: aquatic; omics; methods; microbial; environment
(This special issue belongs to the Section Environmental Microbiology)
Antimicrobial Resistance and One Health
edited by Hermine Mkrtchyan
submission deadline 30 Jun 2024 | Viewed by 105 | Submission Open
Keywords: AMR; One Health; (meta)genomics; human; livestock; environment; microbiomes
(This special issue belongs to the Section Public Health Microbiology)
Gut Microbiota, Zoonotic Diseases and Antimicrobial Research
edited by Andreia J. Amaral
submission deadline 30 Jun 2024 | Viewed by 93 | Submission Open
Keywords: gut microbiota; zoonotic diseases; antimicrobial resistance; Escherichia coli; resistance gene
(This special issue belongs to the Section Gut Microbiota)
Epidemiological and Immunological Studies of Emerging Infectious Diseases
edited by Lone Simonsen
submission deadline 30 Jun 2024 | Viewed by 82 | Submission Open
Keywords: emerging infectious diseases; spread and control; resistance; surveillance
(This special issue belongs to the Section Public Health Microbiology)
Bacterial Antibiotic Resistance
edited by
submission deadline 15 Jul 2024 | 12 articles | Viewed by 21143 | Submission Open
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Food Microorganisms and Genomics submission deadline 15 Jul 2024 | 8 articles | Viewed by 11064 | Submission Open
Keywords: food microbiota; comparative genomics; foodborne pathogen; probiotics; technological starter
(This special issue belongs to the Section Food Microbiology)
Research on Leishmania and Leishmaniasis submission deadline 15 Jul 2024 | 6 articles | Viewed by 8800 | Submission Open
Keywords: Leishmana; Leishmaniasis; drug treatment; vaccine; host-parasite interaction
(This special issue belongs to the Section Parasitology)
Control and Elimination of Viral Hepatitis
edited by and Fernando de la Hoz-Restrepo
submission deadline 15 Jul 2024 | 6 articles | Viewed by 7833 | Submission Open
Keywords: hepatitis virus infection; epidemiology; molecular characterization; vaccines; interventions; antiviral treatment; antiviral agents; validation of elimination
(This special issue belongs to the Section Virology)
Microbiome Research for Animal, Plant and Environmental Health
edited by and
submission deadline 15 Jul 2024 | 5 articles | Viewed by 4554 | Submission Open
Keywords: environmental microbiome; soil microbiome; rhizobiome; host– microbe interactions; microbiome manipulation; sustainable agriculture; One Health
(This special issue belongs to the Section Microbiomes)
Microbial Ecology of Dairy Products: From Diversity to Functions 2.0 submission deadline 15 Jul 2024 | 2 articles | Viewed by 4013 | Submission Open
(This special issue belongs to the Section Food Microbiology)
The Role of Heat Shock Proteins in Diseases and Their Therapeutic Potential: Environmental Stress and Microorganisms
edited by and You Tang
submission deadline 15 Jul 2024 | 2 articles | Viewed by 3777 | Submission Open
Keywords: microorganisms; heat shock proteins; environmental stress; diseases; therapy; molecular mechanism; microorganisms
(This special issue belongs to the Section Molecular Microbiology and Immunology)
The Role of Gut Microbiota in Inflammatory Bowel Disease: Mechanisms and Novel Therapeutic Approaches submission deadline 15 Jul 2024 | 3 articles | Viewed by 3587 | Submission Open
Keywords: Crohn’ s disease; ulcerative colitis; diets; dysbiosis; faecal microbiota transplantation; immunomodulation; metagenomics; herbal medicines; probiotics; prebiotics
(This special issue belongs to the Section Gut Microbiota)
Microorganisms and Diseases Associated with Aquatic Animals 2.0 submission deadline 15 Jul 2024 | 4 articles | Viewed by 2695 | Submission Open
Keywords: microorganisms; diseases; aquatic animals; prevention; diagnosis; pathogenesis; virulence; vaccines; microbiota; immune system
(This special issue belongs to the Section Veterinary Microbiology)
Emerging Viral Zoonoses, Second Edition
edited by
submission deadline 15 Jul 2024 | 1 articles | Viewed by 2222 | Submission Open
Keywords: epidemiology; zoonoses; emerging viruses; prevention
(This special issue belongs to the Section Virology)
Novel Strategies in the Study of the Human Gut Microbiota 2.0 submission deadline 15 Jul 2024 | 3 articles | Viewed by 1736 | Submission Open
Keywords: gut microbiota; homeostasis; probiotics; prebiotics; animal models; in vitro models
(This special issue belongs to the Section Gut Microbiota)
Advances in Metabolic Engineering of Industrial Microorganisms
edited by Shuwen Liu and Shuobo Shi
submission deadline 15 Jul 2024 | 1 articles | Viewed by 1393 | Submission Open
Keywords: metabolic engineering; microbial metabolism; industrial microorganisms
(This special issue belongs to the Section Microbial Biotechnology)
Research on Replication Mechanisms and Molecular Virology of Influenza Virus
edited by Sang-Ik Park, Yeong-Bin Baek and Jun-Gyu Park
submission deadline 15 Jul 2024 | 1 articles | Viewed by 1134 | Submission Open
Keywords: the molecular characterization of influenza infection; host– virus interaction; the mechanism of viral replication; virus life cycle: attachment; penetration; uncoating; replication; assembly; maturation; and release cellular factors involved in the virus life cycle; host immune system during infection; novel antiviral strategy; insights on future antiviral drug; novel vaccine strategy
(This special issue belongs to the Section Virology)
Advances in the Research on Leptospira and Leptospirosis
edited by Eliete Caló Romero and
submission deadline 15 Jul 2024 | 1 articles | Viewed by 1127 | Submission Open
Keywords: leptospirosis; zoonoses; environmental exposure; epidemiology; pathogenesis; clinical cases; diagnosis; genomics; serology; vaccine; One Health
(This special issue belongs to the Section Parasitology)
Airborne Microbial Communities submission deadline 15 Jul 2024 | 1 articles | Viewed by 621 | Submission Open
Keywords: microbial community; diversity; air; atmosphere; built environments; monitoring; bacteria; fungi; microorganisms; bioaerosols
(This special issue belongs to the Section Environmental Microbiology)
Advances in Phage Therapies
edited by
submission deadline 15 Jul 2024 | Viewed by 486 | Submission Open
Keywords: phage therapies
(This special issue belongs to the Section Medical Microbiology)
Helicobacter pylori Infection: Detection and Novel Treatment
edited by Evangelos Kazakos
submission deadline 15 Jul 2024 | Viewed by 425 | Submission Open
Keywords: Helicobacter pylori; gastrointestinal health; antibiotic resistance; infection
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Gut Microbiota 2024
edited by
submission deadline 15 Jul 2024 | Viewed by 277 | Submission Open
Keywords: gut microbiota; nutrition; gut diseases; host health
(This special issue belongs to the Section Gut Microbiota)
Interactions between Plant Pathogens and Insect Vectors
edited by Mitsuru Okuda
submission deadline 15 Jul 2024 | Viewed by 194 | Submission Open
Keywords: molecular mechanisms; virus acquisition; insect vectors; virus-vector interactions; vector-borne plant diseases; vector-borne viruses; disease management
(This special issue belongs to the Section Plant Microbe Interactions)
Impact of COVID-19 on the Microorganisms Causing Healthcare-Associated Infections submission deadline 15 Jul 2024 | Viewed by 171 | Submission Open
Keywords: healthcare-associated infections; microorganisms; COVID-19; surveillance; antimicrobial resistance
(This special issue belongs to the Section Medical Microbiology)
Ancient Microbiomes in the Environment
edited by
submission deadline 15 Jul 2024 | Viewed by 146 | Submission Open
Keywords: ancient sedimentary DNA; molecular paleoecology; paleomicrobiology; paleoenvironmental perturbations; bioinformatics and biostatistics
(This special issue belongs to the Section Environmental Microbiology)
Plant-Growth-Promoting Microbes Modulating Plant–Insect–Virus Interactions
edited by Saumik Basu
submission deadline 15 Jul 2024 | Viewed by 127 | Submission Open
Keywords: plant-growth-promoting microbes; pathogens; herbivores; defense responses; plant nutrition; rhizobia; AMF; secondary metabolites; transcriptomics; metabolomics
(This special issue belongs to the Section Plant Microbe Interactions)
Antimicrobial Peptides: Therapeutic Potentials 2.0
edited by
submission deadline 20 Jul 2024 | 4 articles | Viewed by 5486 | Submission Open
Keywords: antimicrobial peptides; host defence peptides; multi-drug resistant bacteria; novel antimicrobials; immunomodulation; immunotherapy; anticancer peptides; antiparasitic peptides; antifungal peptides; wound healing peptides
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Overviews of Clinical Microbial Infection
edited by
submission deadline 30 Jul 2024 | 1 articles | Viewed by 6420 | Submission Open
Keywords: infection; infectious disease; clinical
(This special issue belongs to the Section Medical Microbiology)
Latest Review Papers in Antimicrobial Agents and Resistance 2024
edited by
submission deadline 30 Jul 2024 | 1 articles | Viewed by 926 | Submission Open
Keywords: antimicrobial agents; antibacterial agents; antifungal agents; antiparasitic agents; resistance properties of microorganisms; antibiotic resistance; multidrug resistance
(This special issue belongs to the Section Antimicrobial Agents and Resistance)
Combating Antibiotic Resistance in Veterinary Microbiology
edited by
submission deadline 30 Jul 2024 | Viewed by 138 | Submission Open
Keywords: veterinary microbiology; antibiotic misuse; resistance genes; One Health approach; drug-resistant pathogens
(This special issue belongs to the Section Veterinary Microbiology)
Antibiotic Resistance and Virulence Factors of Bacteria Isolated from Food submission deadline 31 Jul 2024 | 6 articles | Viewed by 11657 | Submission Open
Keywords: antimicrobial resistance; food microbiology; food chain; virulence; biofilm; antimicrobial resistance mechanisms
(This special issue belongs to the Section Food Microbiology)
Microbial Safety of Fermented Products 2.0
edited by
submission deadline 31 Jul 2024 | 2 articles | Viewed by 8690 | Submission Open
(This special issue belongs to the Section Food Microbiology)
Gut Microbiota: Metagenomics to Study Ecology
edited by
submission deadline 31 Jul 2024 | 5 articles | Viewed by 6372 | Submission Open
Keywords: metagenomics; ecology; multi-omics; metagenomic assembled genomes; function; host– microbe interactions; behavior; local adaptation; biodiversity conservation
(This special issue belongs to the Section Gut Microbiota)
Research on Plant—Bacteria Interactions
edited by
submission deadline 31 Jul 2024 | 5 articles | Viewed by 5993 | Submission Open
Keywords: plant growth promoting bacteria; symbiosis; chemical communication; molecular dialog; environmental stress; soil functioning; plant protection
(This special issue belongs to the Section Plant Microbe Interactions)
Pathogens and Aquaculture
edited by and Juan Pablo Pontigo
submission deadline 31 Jul 2024 | 4 articles | Viewed by 5862 | Submission Open
Keywords: fish; salmon; diseases; pathology; histopathology; virology; molecular epidemiology
(This special issue belongs to the Section Veterinary Microbiology)
Staphylococcal Infections (Host and Pathogenic Factors) 3.0
edited by
submission deadline 31 Jul 2024 | 3 articles | Viewed by 4856 | Submission Open
Keywords: S. aureus; S. epidermidis; Staphylococcus spp.; pore-forming toxins (hemolysins and leukotoxins); quorum sensing (QS) and two component (TC) systems; colonization; biofilm formation; surface proteins; enterotoxins (superantigens)
(This special issue belongs to the Section Molecular Microbiology and Immunology)
Gut Microbiome in Homeostasis and Disease 2.0
edited by
submission deadline 31 Jul 2024 | 4 articles | Viewed by 4514 | Submission Open
(This special issue belongs to the Section Gut Microbiota)
The Infective Endocarditis submission deadline 31 Jul 2024 | 5 articles | Viewed by 4151 | Submission Open
Keywords: infective endocarditis (IE); native valve endocarditis; TAVI endocarditis; prosthetic valve endocarditis; staphylococcal endocarditis; enterococcal endocarditis; molecular biology diagnosis; cardiac PET/CT diagnosis; vascular graft infections; LVAD infections; endocarditis in the elderly; endocarditis in PWID; oral antimicrobial treatment of IE; cardiac surgery of IE; cardiovascular infections; cardiac implantable electronic device (CIED)-IE
(This special issue belongs to the Section Medical Microbiology)
Interactions between Parasites/Pathogens and Vectors
edited by and Norman Ratcliffe
submission deadline 31 Jul 2024 | 3 articles | Viewed by 3905 | Submission Open
(This special issue belongs to the Section Parasitology)
Molecular Epidemiology, Diagnostics and Management of Respiratory Virus Infections 2.0 submission deadline 31 Jul 2024 | 3 articles | Viewed by 3538 | Submission Open
Keywords: viral respiratory infections; molecular epidemiology; diagnostics; management
(This special issue belongs to the Section Public Health Microbiology)
Pathogen Infection in Wildlife 2.0
edited by
submission deadline 31 Jul 2024 | 3 articles | Viewed by 3413 | Submission Open
(This special issue belongs to the Section Veterinary Microbiology)
Prevention and Control of Zoonotic Pathogen Infection
edited by Maria L. Danzetta
submission deadline 31 Jul 2024 | 3 articles | Viewed by 3330 | Submission Open
Keywords: zoonotic bacteria; zoonotic pathogen; global public health; food production
(This special issue belongs to the Section Public Health Microbiology)
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