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23 pages, 5225 KB  
Article
Soil–Atmosphere Greenhouse Gas Fluxes Across a Land-Use Gradient in the Andes–Amazon Transition Zone: Insights for Climate Innovation
by Armando Sterling, Yerson D. Suárez-Córdoba, Natalia A. Rodríguez-Castillo and Carlos H. Rodríguez-León
Land 2025, 14(10), 1980; https://doi.org/10.3390/land14101980 - 1 Oct 2025
Viewed by 307
Abstract
This study evaluated the seasonal variability of soil–atmosphere greenhouse gas (GHG) fluxes—carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O)—across a land-use gradient in the Andean–Amazon transition zone of Colombia. The gradient included five land-use types incorporating [...] Read more.
This study evaluated the seasonal variability of soil–atmosphere greenhouse gas (GHG) fluxes—carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O)—across a land-use gradient in the Andean–Amazon transition zone of Colombia. The gradient included five land-use types incorporating at least one innovative climate-smart practice—improved pasture (IP), cacao agroforestry system (CaAS), copoazu agroforestry system (CoAS), secondary forest with agroforestry enrichment (SFAE), and moriche palm swamp ecosystem (MPSE)—alongside the dominant regional land uses, old-growth forest (OF) and degraded pasture (DP). Soil GHG fluxes varied markedly among land-use types and between seasons. CO2 fluxes were consistently higher during the dry season, whereas CH4 and N2O fluxes peaked in the rainy season. Agroecological and restoration systems exhibited substantially lower CO2 emissions (7.34–9.74 Mg CO2-C ha−1 yr−1) compared with DP (18.85 Mg CO2-C ha−1 yr−1) during the rainy season, and lower N2O fluxes (0.21–1.04 Mg CO2-C ha−1 yr−1) during the dry season. In contrast, the MPSE presented high CH4 emissions in the rainy season (300.45 kg CH4-C ha−1 yr−1). Across all land uses, CO2 was the dominant contributor to the total GWP (>95% of emissions). The highest global warming potential (GWP) occurred in DP, whereas CaAS, CoAS and MPSE exhibited the lowest values. Soil temperature, pH, exchangeable acidity, texture, and bulk density play a decisive role in regulating GHG fluxes, whereas climatic factors, such as air temperature and relative humidity, influence fluxes indirectly by modulating soil conditions. These findings underscore the role of diversified agroforestry and restoration systems in mitigating GHG emissions and the need to integrate soil and climate drivers into regional climate models. Full article
(This article belongs to the Special Issue Land Use Effects on Carbon Storage and Greenhouse Gas Emissions)
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16 pages, 8188 KB  
Article
Palynological Characteristics of Neogene Deposits from Bełchatów Lignite Mine (Central Poland)
by Thang Van Do and Ewa Durska
Plants 2025, 14(19), 3034; https://doi.org/10.3390/plants14193034 - 30 Sep 2025
Viewed by 433
Abstract
The Bełchatów Lignite Mine (BLM) in central Poland, one of Europe’s largest Neogene lignite deposits, provides key insights into palaeofloral evolution. Located in the Kleszczów Graben, the BLM consists of four distinct lithological units: subcoal, coal, clayey-coal, and clayey-sandy units. The study presents [...] Read more.
The Bełchatów Lignite Mine (BLM) in central Poland, one of Europe’s largest Neogene lignite deposits, provides key insights into palaeofloral evolution. Located in the Kleszczów Graben, the BLM consists of four distinct lithological units: subcoal, coal, clayey-coal, and clayey-sandy units. The study presents a palynological investigation of 31 samples from all units, identifying 78 sporomorph taxa, including 10 plant spores, 15 gymnosperm pollen, and 53 angiosperm pollen taxa. Pollen grains from angiosperms and gymnosperms were consistently observed in all samples, while plant spores were scarce. The analysis reveals three distinct palynological zones, reflecting shifts in vegetation. The first zone is characterized by swamp, riparian, and mixed mesophilous forests, dominated by Taxodium/Glyptostrobus, Ulmus, Carya, Engelhardia, Pterocarya, and Quercus. In the second zone, slightly cooler climatic conditions led to the decline of Taxodium/Glyptostrobus and Alnus, indicating a deterioration of swamp forests. The third zone marks a subsequent recovery of these forests. Palaeoclimatic interpretations indicate three phases: a subtropical-humid climate during the Early Miocene, fluctuating humidity in the late Early Miocene, and a transition to a warm-temperate and humid climate in the Late Miocene. Full article
(This article belongs to the Section Plant Systematics, Taxonomy, Nomenclature and Classification)
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14 pages, 1087 KB  
Article
Suillus flavidus, a Peatland-Associated Mycorrhizal Fungus in Poland: Ecology, Distribution, Conservation Threats, and Sustainability Considerations
by Małgorzata Stasińska
Sustainability 2025, 17(18), 8244; https://doi.org/10.3390/su17188244 - 13 Sep 2025
Viewed by 815
Abstract
Suillus flavidus is an ectomycorrhizal fungus associated with moist, nutrient-poor habitats, particularly peat bogs and transitional mires, where it forms symbiotic relationships with two-needle pines, especially Pinus sylvestris. This study presents an updated assessment of its distribution in Poland, identifies key ecological [...] Read more.
Suillus flavidus is an ectomycorrhizal fungus associated with moist, nutrient-poor habitats, particularly peat bogs and transitional mires, where it forms symbiotic relationships with two-needle pines, especially Pinus sylvestris. This study presents an updated assessment of its distribution in Poland, identifies key ecological factors influencing its occurrence—such as habitat type and phenology—and evaluates its conservation status in the context of sustainability goals. Analysis of available data shows that over two-thirds of the known sites in Poland are located in peatland ecosystems, with more than half occurring within protected areas. Although S. flavidus is distinctly hygrophilous, it appears to prefer moderately wet habitats, particularly swamp forests. Despite an increase in recorded localities over the past five decades, S. flavidus remains an endangered species due to the ongoing degradation of peatland habitats, which are increasingly threatened by land-use change, drainage, and climate-related shifts in hydrology. The species’ long-term survival depends on sustainable landscape management, the preservation of suitable host tree populations, and the inclusion of fungi in conservation and restoration strategies. Thus, S. flavidus should be considered both an indicator species and a relevant element in meeting sustainability goals. Full article
(This article belongs to the Section Sustainability, Biodiversity and Conservation)
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24 pages, 22832 KB  
Article
Habitat and Conservation Assessment of Annual Killifishes of the Genus Xenurolebias (Rivulidae: Cynolebiinae) from Coastal Floodplains, Including the First Record South of the Rio Doce, Southeastern Brazil
by Bruno Pinheiro Gomes, Luisa Maria Sarmento-Soares, Ronaldo Fernando Martins-Pinheiro and Gustavo Rocha Leite
Diversity 2025, 17(9), 644; https://doi.org/10.3390/d17090644 - 12 Sep 2025
Viewed by 1493
Abstract
The Atlantic Forest coastal tablelands is home to a wide diversity of small-sized freshwater fish sharing a biogeographically congruent distributional pattern. The annual killifish Xenurolebias are among these remarkable inhabitants in the riparian wetlands with four species in the area. Xenurolebias pataxo are [...] Read more.
The Atlantic Forest coastal tablelands is home to a wide diversity of small-sized freshwater fish sharing a biogeographically congruent distributional pattern. The annual killifish Xenurolebias are among these remarkable inhabitants in the riparian wetlands with four species in the area. Xenurolebias pataxo are located between the Jucuruçu and Mucuri rivers, geographically replaced by Xenurolebias myersi at the Riacho Doce and the Rio Itaúnas, and, further south, Xenurolebias cricarensis are in the floodplains of the Rio São Mateus and Xenurolebias izecksohni, living in temporary environments of the Rio Barra Seca, north of the Rio Doce. Due to their restricted habitat in the lowlands, these annual killifish could all be designated as a target species, providing benefits in the conservation of riparian wetlands. However, less is known about their habits and real distribution. Otherwise, the accelerated habitat loss is worrisome. Two of these species are threatened with extinction on Red Lists; one is Near-Threatened; and one is Data-Deficient. After ten years since the last species description, our investigations revealed a fifth species, the first recorded south of Rio Doce. The present contribution aims to characterize the occupied habitat by each species within the temporary environments and present an updated distributional data on these fish. Additionally, a new Xenurolebias is described, the first one recorded south of Rio Doce. Full article
(This article belongs to the Special Issue Evolution, Systematic and Conservation of Freshwater Fishes)
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16 pages, 3100 KB  
Article
Reproductive Ecology of the Freshwater Snail, Pila globosa, Considering Environmental Factors in a Tropical Freshwater Swamp Forest
by Suhel Das, Mohammad Amzad Hossain, Gourab Chowdhury, Monayem Hussain, Debasish Pandit, Mrityunjoy Kunda, Petra Schneider and Mohammed Mahbub Iqbal
Conservation 2025, 5(3), 43; https://doi.org/10.3390/conservation5030043 - 18 Aug 2025
Viewed by 986
Abstract
The apple snail Pila globosa is a widely distributed mollusc in tropical freshwater ecosystems, where it plays a crucial ecological role. This study examined the morphometric features, condition indices, and reproductive traits of P. globosa to gain insights into its population structure in [...] Read more.
The apple snail Pila globosa is a widely distributed mollusc in tropical freshwater ecosystems, where it plays a crucial ecological role. This study examined the morphometric features, condition indices, and reproductive traits of P. globosa to gain insights into its population structure in the Ratargul Freshwater Swamp Forest, Bangladesh. Water quality parameters were recorded, and various morphometric measurements were analysed, including their correlations and seasonal variations. The mean values for shell length, shell weight, shell width, spiral length, base length, aperture length, aperture width, and soft tissue wet weight were 4.64 ± 0.97 cm, 38.29 ± 15.27 g, 3.56 ± 0.74 cm, 2.32 ± 0.51 cm, 3.33 ± 0.74 cm, 3.46 ± 0.64 cm, 2.01 ± 0.45 cm, and 18.05 ± 11.39 g, respectively. Linear regression analyses revealed strong correlations among length–length and length–weight parameters, indicating consistent growth patterns. Monthly frequency distributions showed distinct variations in shell size and form. The sex ratio was 1:1.23 (male–female), not significantly different from parity. Histological analysis during the rainy season revealed reproductive activity, including mature ova, previtellogenic and vitellogenic oocytes, and spermatogonia and spermatids. These findings enhance understanding of the species’ biology and its interaction with environmental conditions, offering valuable data for the conservation and management of freshwater mollusc populations in wetland ecosystems. Full article
(This article belongs to the Special Issue Conservation and Ecology of Polymorphic Animal Populations)
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16 pages, 2714 KB  
Article
Early Succession Across Boreal Forest Transitions After Linear Disturbance and Wildfire
by Colleen M. Sutheimer and Scott E. Nielsen
Forests 2025, 16(8), 1333; https://doi.org/10.3390/f16081333 - 16 Aug 2025
Viewed by 845
Abstract
Anthropogenic disturbances interact with wildfire, altering successional dynamics across North America’s boreal forest. Linear disturbances, including seismic lines used for oil and gas exploration, dissect forests, while wildfire is a fundamental agent of forest succession. However, little is known about early succession dynamics [...] Read more.
Anthropogenic disturbances interact with wildfire, altering successional dynamics across North America’s boreal forest. Linear disturbances, including seismic lines used for oil and gas exploration, dissect forests, while wildfire is a fundamental agent of forest succession. However, little is known about early succession dynamics after both seismic line creation and wildfire, especially across transitions from uplands to peatlands. To address this, we characterized and compared regeneration and recruitment after individual and successive disturbances in peatland, transitional, and mesic upland forests across the oil sands region of Alberta, Canada. We used non-metric multidimensional scaling to compare composition and mixed-effects generalized linear models to compare densities of trees and tall shrubs 10 to 24 years after disturbance. Compositionally, regeneration was similar within forest types and between transitional and peatland forests, while patterns in recruitment were more influenced by past disturbances. Overall, we found evidence of dominant, additive, and interactive effects on early successional patterns within linear disturbances in boreal forests. In transitional and peatland forests, disturbances influenced tree and tall shrub regeneration and recruitment in complex ways. Early successional dynamics after disturbance influence forest structure and composition and are vital to understanding recovery in boreal forests, especially across boreal forest transitions. Full article
(This article belongs to the Special Issue Impact of Disturbance on Forest Regeneration and Recruitment)
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25 pages, 6358 KB  
Article
First Assessment of the Biodiversity of True Slime Molds in Swamp Forest Stands of the Knyszyn Forest (Northeast Poland) Using the Moist Chambers Detection Method
by Tomasz Pawłowicz, Igor Żebrowski, Gabriel Michał Micewicz, Monika Puchlik, Konrad Wilamowski, Krzysztof Sztabkowski and Tomasz Oszako
Forests 2025, 16(8), 1259; https://doi.org/10.3390/f16081259 - 1 Aug 2025
Cited by 2 | Viewed by 1254
Abstract
True slime molds (Eumycetozoa) remain under-explored globally, particularly in water-logged forest habitats. Despite evidence suggesting a high biodiversity potential in the Knyszyn Forest of north-eastern Poland, no systematic effort had previously been undertaken there. In the present survey, plant substrates from [...] Read more.
True slime molds (Eumycetozoa) remain under-explored globally, particularly in water-logged forest habitats. Despite evidence suggesting a high biodiversity potential in the Knyszyn Forest of north-eastern Poland, no systematic effort had previously been undertaken there. In the present survey, plant substrates from eight swampy sub-compartments were incubated for over four months, resulting in the detection of fifteen slime mold species. Four of these taxa are newly reported for northern and north-eastern Poland, while several have been recorded only a handful of times in the global literature. These findings underscore how damp, nutrient-rich conditions foster Eumycetozoa and demonstrate the effectiveness of moist-chamber culturing in revealing rare or overlooked taxa. Current evidence shows that, although slime molds may occasionally colonize living plant or fungal tissues, their influence on crop productivity and tree vitality is negligible; they are therefore better regarded as biodiversity indicators than as pathogens or pests. By establishing a replicable framework for studying water-logged environments worldwide, this work highlights the ecological importance of swamp forests in sustaining microbial and slime mold diversity. Full article
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23 pages, 3761 KB  
Article
Long-Term Changes in Groundwater Levels in the Białowieża Forest, Poland, Under Climate Change
by Andrzej Boczoń, Michał Wróbel and Anna Kowalska
Water 2025, 17(13), 2027; https://doi.org/10.3390/w17132027 - 5 Jul 2025
Cited by 2 | Viewed by 1022
Abstract
Groundwater is the primary water source for ecosystems, and so changes in groundwater levels, if directional and constant, can cause changes in vegetation and habitat characters. In Białowieża National Park, a significant decline in the water table was observed at the beginning of [...] Read more.
Groundwater is the primary water source for ecosystems, and so changes in groundwater levels, if directional and constant, can cause changes in vegetation and habitat characters. In Białowieża National Park, a significant decline in the water table was observed at the beginning of the 20th century. The question therefore arose as to whether the changes that occurred at that time were permanent. A second question was whether the negative trend would continue so clearly in the following years. The study is based on measurements from 1985 to 2005 and 2022 to 2023 taken in the same monitoring wells. Complete data were collected from 21 monitoring wells. An analysis of groundwater levels between 1985 and 2005 showed an average decline of 0.08 m/10 years in swamp habitats, 0.11 m/10 years in moist habitats, and 0.21 m/10 years in fresh habitats. The measurements in 2022 and 2023 showed that the trend of falling water levels had slowed down in almost the entire study area, with water levels in recent years being similar to those at the beginning of the century. This was also confirmed by comparing years with similar precipitation: 2022 with 1986, and 2002, 2004, and 2023 with 1999. This was due to the higher precipitation after 2005. In the period of 2006–2023, precipitation in the hydrological years was on average 60 mm higher than in the period of 1985–2005. Despite the clear trend toward rising air temperatures, the higher precipitation compensated for the higher evapotranspiration. However, one area showed a systematic decrease in water levels. This occurred at the watershed of the two largest rivers in the Białowieża Forest. The findings indicate that watershed areas are most vulnerable to lowering the groundwater level due to climatic warming. Full article
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22 pages, 3232 KB  
Article
From Clusters to Communities: Enhancing Wetland Vegetation Mapping Using Unsupervised and Supervised Synergy
by Li Wen, Shawn Ryan, Megan Powell and Joanne E. Ling
Remote Sens. 2025, 17(13), 2279; https://doi.org/10.3390/rs17132279 - 3 Jul 2025
Viewed by 795
Abstract
High thematic resolution vegetation mapping is essential for monitoring wetland ecosystems, supporting conservation, and guiding water management. However, producing accurate, fine-scale vegetation maps in large, heterogeneous floodplain wetlands remains challenging due to complex hydrology, spectral similarity among vegetation types, and the high cost [...] Read more.
High thematic resolution vegetation mapping is essential for monitoring wetland ecosystems, supporting conservation, and guiding water management. However, producing accurate, fine-scale vegetation maps in large, heterogeneous floodplain wetlands remains challenging due to complex hydrology, spectral similarity among vegetation types, and the high cost of extensive field surveys. This study addresses these challenges by developing a scalable vegetation classification framework that integrates cluster-guided sample selection, Random Forest modelling, and multi-source remote-sensing data. The approach combines multi-temporal Sentinel-1 SAR, Sentinel-2 optical imagery, and hydro-morphological predictors derived from LiDAR and hydrologically enforced SRTM DEMs. Applied to the Great Cumbung Swamp, a structurally and hydrologically complex terminal wetland in the lower Lachlan River floodplain of Australia, the framework produced vegetation maps at three hierarchical levels: formations (9 classes), functional groups (14 classes), and plant community types (PCTs; 23 classes). The PCT-level classification achieved an overall accuracy of 93.2%, a kappa coefficient of 0.91, and a Matthews correlation coefficient (MCC) of 0.89, with broader classification levels exceeding 95% accuracy. These results demonstrate that, through targeted sample selection and integration of spectral, structural, and terrain-derived data, high-accuracy, high-resolution wetland vegetation mapping is achievable with reduced field data requirements. The hierarchical structure further enables broader vegetation categories to be efficiently derived from detailed PCT outputs, providing a practical, transferable tool for wetland monitoring, habitat assessment, and conservation planning. Full article
(This article belongs to the Section Environmental Remote Sensing)
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16 pages, 2043 KB  
Article
Being Edgy: Ecotones of Ground Cover Vegetation in Managed Black Alder Habitats
by Agnese Anta Liepiņa, Didzis Elferts, Roberts Matisons, Āris Jansons and Diāna Jansone
Forests 2025, 16(5), 846; https://doi.org/10.3390/f16050846 - 19 May 2025
Viewed by 559
Abstract
Retention forestry creates anthropogenic ecotones that diversify forest landscapes in terms of age and biomass. Such diversification can have ambiguous ecological impacts, raising uncertainties, particularly for black alder swamp woodlands, which are considered sensitive and are prioritized in EU conservation policy. This study [...] Read more.
Retention forestry creates anthropogenic ecotones that diversify forest landscapes in terms of age and biomass. Such diversification can have ambiguous ecological impacts, raising uncertainties, particularly for black alder swamp woodlands, which are considered sensitive and are prioritized in EU conservation policy. This study aimed to examine the effects of adjacent clear-cutting on ground cover vegetation in 12 black alder stands in the hemiboreal zone in Latvia 11 to 120 years since the harvest. Ground cover vegetation was recorded by species along 40 m transects. The effects of the time since adjacent stand harvesting and exposure to the edge on species richness and Shannon diversity were assessed using linear mixed-effects models. A detrended correspondence analysis was used to explore the main environmental gradients. A total of 103 species were recorded: 15 in the tree and shrub layer, 66 in the herbaceous layer, and 22 in the moss and lichen layer. The exposure to the adjacent stand had a moderate positive effect on species diversity, while the effects of edge age were complex and varied by stand type. The scale of disturbance (the absolute length of the analyzed edge), rather than edge age or exposure, had the most pronounced effect on ground cover vegetation composition, suggesting persistent secondary edge effects that should be considered in forest management and conservation planning. Full article
(This article belongs to the Special Issue Forest Disturbance and Management)
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19 pages, 5640 KB  
Article
Forested Swamp Classification Based on Multi-Source Remote Sensing Data: A Case Study of Changbai Mountain Ecological Function Protection Area
by Jing Lv, Yuyan Liu, Ri Jin and Weihong Zhu
Forests 2025, 16(5), 794; https://doi.org/10.3390/f16050794 - 9 May 2025
Viewed by 717
Abstract
Forested wetlands in temperate mountain ecosystems play a critical role in carbon sequestration and biodiversity maintenance, yet their accurate delineation remains challenging due to spectral similarity with forests and anthropogenic interference. Here, we present an optimized two-stage Random Forest framework integrating 2019–2022 growing [...] Read more.
Forested wetlands in temperate mountain ecosystems play a critical role in carbon sequestration and biodiversity maintenance, yet their accurate delineation remains challenging due to spectral similarity with forests and anthropogenic interference. Here, we present an optimized two-stage Random Forest framework integrating 2019–2022 growing season datasets from Sentinel-1 C-SAR, ALOS-2 L-PALSAR, Sentinel-2 MSI, and Landsat-8 TIRS with environmental covariates. The methodology first applied NDBI thresholding (NDBI > 0.12) to exclude 94% of urban/agricultural areas through spectral masking, then implemented an optimized Random Forest classifier (ntree = 1200, mtry = 28) with 10-fold cross-validation, leveraging 42 features including L-band HV backscatter (feature importance = 47), Sentinel-2 SWIR (Band12; importance = 57), and land surface temperature gradients. This study pioneers a 10 m resolution forest swamp map in the Changbai Mountain wetlands, achieving 87.18% overall accuracy (Kappa = 0.84) with strong predictive performance (AUC = 0.89). Forest swamps showed robust classification metrics (PA = 80.37%, UA = 86.87%), driven by L-band SAR’s superior discriminative power (p < 0.05). Quantitative assessment demonstrated that L-band SAR increased classification accuracy in canopy penetration scenarios by 4.2% compared to optical-only approaches, while thermal-IR features reduced confusion with forests. Forested swamps occupied 229.95 km2 (9% of protected areas), predominantly in transitional ecotones (720–850 m elevation) between herbaceous wetlands and forest. This study establishes that multi-sensor fusion enables operational wetland monitoring in topographically complex regions, providing a transferable framework for temperate mountain ecosystems. The dataset advances precision conservation strategies for these climate-sensitive habitats, supporting sustainable development goals targets for wetland protection through enhanced machine learning interpretability and anthropogenic interference mitigation. Full article
(This article belongs to the Section Forest Inventory, Modeling and Remote Sensing)
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29 pages, 3813 KB  
Article
A Quaternary Sedimentary Ancient DNA (sedaDNA) Record of Fungal–Terrestrial Ecosystem Dynamics in a Tropical Biodiversity Hotspot (Lake Towuti, Sulawesi, Indonesia)
by Md Akhtar-E Ekram, Cornelia Wuchter, Satria Bijaksana, Kliti Grice, James Russell, Janelle Stevenson, Hendrik Vogel and Marco J. L. Coolen
Microorganisms 2025, 13(5), 1005; https://doi.org/10.3390/microorganisms13051005 - 27 Apr 2025
Cited by 1 | Viewed by 1508
Abstract
Short-term observations suggest that environmental changes affect the diversity and composition of soil fungi, significantly influencing forest resilience, plant diversity, and soil processes. However, time-series experiments should be supplemented with geobiological archives to capture the long-term effects of environmental changes on fungi–soil–plant interactions, [...] Read more.
Short-term observations suggest that environmental changes affect the diversity and composition of soil fungi, significantly influencing forest resilience, plant diversity, and soil processes. However, time-series experiments should be supplemented with geobiological archives to capture the long-term effects of environmental changes on fungi–soil–plant interactions, particularly in undersampled, floristically diverse tropical forests. We recently conducted trnL-P6 amplicon sequencing to generate a sedimentary ancient DNA (sedaDNA) record of the regional catchment vegetation of the tropical waterbody Lake Towuti (Sulawesi, Indonesia), spanning over one million years (Myr) of the lake’s developmental history. In this study, we performed 18SV9 amplicon sequencing to create a parallel paleofungal record to (a) infer the composition, origins, and functional guilds of paleofungal community members and (b) determine the extent to which downcore changes in fungal community composition reflect the late Pleistocene evolution of the Lake Towuti catchment. We identified at least 52 members of Ascomycota (predominantly Dothiodeomycetes, Eurotiomycetes, and Leotiomycetes) and 12 members of Basidiomycota (primarily Agaricales and Polyporales). Spearman correlation analysis of the relative changes in fungal community composition, geochemical parameters, and paleovegetation assemblages revealed that the overwhelming majority consisted of soil organic matter and wood-decaying saprobes, except for a necrotrophic phytopathogenic association between Mycosphaerellaceae (Cadophora) and wetland herbs (Alocasia) in more-than-1-Myr-old silts and peats deposited in a pre-lake landscape, dominated by small rivers, wetlands, and peat swamps. During the lacustrine stage, vegetation that used to grow on ultramafic catchment soils during extended periods of inferred drying showed associations with dark septate endophytes (Ploettnerulaceae and Didymellaceae) that can produce large quantities of siderophores to solubilize mineral-bound ferrous iron, releasing bioavailable ferrous iron needed for several processes in plants, including photosynthesis. Our study showed that sedaDNA metabarcoding paired with the analysis of geochemical parameters yielded plausible insights into fungal-plant-soil interactions, and inferred changes in the paleohydrology and catchment evolution of tropical Lake Towuti, spanning more than one Myr of deposition. Full article
(This article belongs to the Special Issue Ancient Microbiomes in the Environment)
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19 pages, 3695 KB  
Article
Contextualizing Estimated Tree Densities and Expert-Classified Ecosystems in the Historical Midwestern United States, a Region with Exposure to Frequent Fires
by Brice B. Hanberry, Charles M. Ruffner and Robert Tatina
Forests 2025, 16(5), 748; https://doi.org/10.3390/f16050748 - 27 Apr 2025
Viewed by 501
Abstract
Many ecosystems have been altered since European colonization, resulting in the loss of historical ecosystems along with information about historical ecosystems. Tree density estimation from historical land surveys with alignment to expert classifications of historical vegetation strengthen reconstructions of vegetation history through research [...] Read more.
Many ecosystems have been altered since European colonization, resulting in the loss of historical ecosystems along with information about historical ecosystems. Tree density estimation from historical land surveys with alignment to expert classifications of historical vegetation strengthen reconstructions of vegetation history through research triangulation. For the midwestern United States, we extended historical tree density estimates (≥12.7 cm in diameter) to contextualize expert classifications of vegetation types in Illinois and Minnesota, part of the historical Great Plains grasslands with very frequent fire exposure, and Indiana and southern Michigan, which were more protected from fire. We also identified a tree density threshold between grasslands and savannas and contrasted density estimates with two alternate density estimates. After refining expert-classified vegetation types, out of 14 major historical ecosystems in this region, 11 were grasslands, savannas, or woodlands. The three additional ecosystems were American beech (Fagus grandifolia) closed woodlands and forests in Indiana and American beech-oak (Quercus) closed woodlands and forests and tamarack (Larix laricina) and ash (Fraxinus) swamp forests in southern Michigan. Because tree densities in the grasslands of Illinois and Minnesota did not exceed 4 trees/ha and tree densities in the savannas of Indiana, Michigan, and Minnesota ranged from 23 trees/ha to 78 trees/ha, around 15 trees/ha may be a reasonable threshold between grasslands and savannas. Density estimates generally matched with two other sources of density estimates, despite using different approaches, supporting the reliability of density estimation. Anchoring density estimates from land surveys to other sources of historical vegetation establishes the validity of density estimation, while supplementing expert-classified ecosystems. Full article
(This article belongs to the Section Forest Ecology and Management)
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25 pages, 9849 KB  
Article
Using Bi-Temporal Lidar to Evaluate Canopy Structure and Ecotone Influence on Landsat Vegetation Index Trends Within a Boreal Wetland Complex
by Farnoosh Aslami, Chris Hopkinson, Laura Chasmer, Craig Mahoney and Daniel L. Peters
Appl. Sci. 2025, 15(9), 4653; https://doi.org/10.3390/app15094653 - 23 Apr 2025
Cited by 2 | Viewed by 1095
Abstract
Wetland ecosystems are sensitive to climate variation, yet tracking vegetation type and structure changes through time remains a challenge. This study examines how Landsat-derived vegetation indices (NDVI and EVI) correspond with lidar-derived canopy height model (CHM) changes from 2000 to 2018 across the [...] Read more.
Wetland ecosystems are sensitive to climate variation, yet tracking vegetation type and structure changes through time remains a challenge. This study examines how Landsat-derived vegetation indices (NDVI and EVI) correspond with lidar-derived canopy height model (CHM) changes from 2000 to 2018 across the wetland landscape of the Peace–Athabasca Delta (PAD), Canada. By comparing CHM change and NDVI and EVI trends across woody and herbaceous land covers, this study fills a gap in understanding long-term vegetation responses in northern wetlands. Findings show that ~35% of the study area experienced canopy growth, while 2% saw a reduction in height. CHM change revealed 11% ecotonal expansion, where shrub and treed swamps encroached on meadow and marsh areas. NDVI and EVI correlated significantly (p < 0.001) with CHM, particularly in shrub swamps (r2 = 0.40, 0.35) and upland forests (NDVI r2 = 0.37). However, EVI trends aligned more strongly with canopy expansion, while NDVI captured mature tree height growth and wetland drying, indicated by rising land surface temperatures (LST). These results highlight the contrasting responses of NDVI and EVI—NDVI being more sensitive to moisture-related changes such as wetland drying, and EVI aligning more closely with canopy structural changes—emphasizing the value of combining lidar and satellite indices to monitor wetland ecosystems in a warming climate. Full article
(This article belongs to the Special Issue Application of Remote Sensing in Environmental Monitoring)
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19 pages, 2501 KB  
Article
Mapping Tropical Forested Wetlands Biomass with LiDAR: A Machine Learning Comparison
by Jonathan V. Solórzano, Candelario Peralta-Carreta and J. Alberto Gallardo-Cruz
Remote Sens. 2025, 17(6), 1076; https://doi.org/10.3390/rs17061076 - 19 Mar 2025
Cited by 2 | Viewed by 1986
Abstract
Mangroves and tropical swamp forests are ecosystems that play a critical role in carbon sequestration, coastal protection, and biodiversity support. Accurately estimating aboveground biomass (AGB) in these forests is crucial for global carbon management and conservation efforts. This study evaluates the potential of [...] Read more.
Mangroves and tropical swamp forests are ecosystems that play a critical role in carbon sequestration, coastal protection, and biodiversity support. Accurately estimating aboveground biomass (AGB) in these forests is crucial for global carbon management and conservation efforts. This study evaluates the potential of LiDAR-derived metrics to model the AGB of an area with mangroves and tropical swamp forests in Southeast Mexico. The study area, located in the Pantanos de Centla Protected Area, encompasses a gradient of seasonal waterlogged conditions, from saline to freshwater. Data were collected from 25 1250-m2 plots, and three modeling approaches—linear regression, random forest, and XGBoost—were employed to estimate the AGB. The data were divided into training and test sets using an 80:20 ratio. The results indicate that the random forest model outperformed the others, achieving the lowest root mean squared error (RMSE = 20.25 Mg/ha, rRMSE = 12.25%, R2 = 0.88). The most influential variables in this model were mean height (zmean), the 35th percentile of height (zq35), and the fourth percentile of returns (p4th), all positively correlated with the AGB. The model’s robustness and uncertainty were evaluated through bootstrapping and spatial prediction across the study area, with higher AGB values concentrated near the main water channels. This study underscores the effectiveness of LiDAR-derived metrics for AGB estimation in complex forested environments. Full article
(This article belongs to the Special Issue Remote Sensing in Mangroves III)
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