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Keywords = olive viruses

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20 pages, 3787 KiB  
Article
In Vitro Influenza A Virus-Inactivating Activity of HIDROX®, Hydroxytyrosol-Rich Aqueous Olive Pulp Extract
by Mayar Yasser Zeinelabideen Mohamed, Dulamjav Jamsransuren, Sachiko Matsuda, Koichi Narita, Toshihiro Murata, Haruko Ogawa and Yohei Takeda
Pathogens 2025, 14(6), 529; https://doi.org/10.3390/pathogens14060529 - 25 May 2025
Viewed by 712
Abstract
Influenza A virus (IAV) is an important respiratory pathogen. We evaluated the IAV-inactivation activity of hydroxytyrosol (HT)-rich aqueous olive pulp extract (HIDROX®) and its mechanisms. The HIDROX-containing solution and cream showed concentration- and time-dependent virucidal activity. The virucidal activity of HIDROX [...] Read more.
Influenza A virus (IAV) is an important respiratory pathogen. We evaluated the IAV-inactivation activity of hydroxytyrosol (HT)-rich aqueous olive pulp extract (HIDROX®) and its mechanisms. The HIDROX-containing solution and cream showed concentration- and time-dependent virucidal activity. The virucidal activity of HIDROX was higher than pure HT. With Western blotting (WB), the band intensities of multiple viral structural proteins in HIDROX- and HT-treated viruses were weaker than in the control, and high-molecular-mass bands were observed. These results suggest that HIDROX and HT may have induced the structural changes or abnormalities of viral proteins. HIDROX and HT had no or limited impact on hemagglutination and neuraminidase activities, as well as the virus genome. No apparent abnormalities in the viral particles were observed through electron microscopy following treatment with HIDROX and HT. Treatment with HT, but not HIDROX, resulted in the production of high levels of reactive oxygen species (ROS) and/or reactive nitrogen species (RNS). In HT treatment but not HIDROX treatment, the virucidal activity disappeared, and the induction of abnormal band patterns of a viral protein in WB was cancelled by ROS/RNS scavenger activity. These findings showed the possible utility of HIDROX as a naturally derived IAV virucidal component that may contribute to IAV control. Full article
(This article belongs to the Collection Emerging and Re-emerging Pathogens)
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14 pages, 1985 KiB  
Article
Spilanthes acmella Extract-Based Natural Oils Loaded Emulgel for Anti-Microbial Action against Dermatitis
by Aqsa Afzal, Syed Nisar Hussain Shah, Hina Javed, Asma Mumtaz, Javeria Saeed, Hafiz Majid Rasheed, Rabia Arshad, Siddique Akber Ansari, Hamad M. Alkahtani and Irfan Aamer Ansari
Gels 2023, 9(10), 832; https://doi.org/10.3390/gels9100832 - 20 Oct 2023
Cited by 4 | Viewed by 4439
Abstract
Background: Dermatitis is skin disorder that is complicated by recurrent infections of skin by bacteria, viruses, and fungi. Spilanthol is an active constituent of Spilanthes acmella, which possess strong anti-bacterial properties. The purpose of this study was to develop a herbal emulgel [...] Read more.
Background: Dermatitis is skin disorder that is complicated by recurrent infections of skin by bacteria, viruses, and fungi. Spilanthol is an active constituent of Spilanthes acmella, which possess strong anti-bacterial properties. The purpose of this study was to develop a herbal emulgel for the treatment of dermal bacterial infections, as microscopic organisms have created solid resistance against anti-microbials. Methods: Emulgels were prepared and characterized for parameters such as physical examination, rheological studies, spreading coefficient, bio-adhesive strength measurement, extrudability study, antibacterial activity, FTIR analysis, in vitro drug dissolution, and ex vivo permeation studies. Result: With a statistically significant p-value = 0.024, 100% antibacterial activity was observed by F4 against Staphylococcus aureus, Pseudomonas aeruginosa, and Escherichia coli (mean ± S.D) (25.33 ± 0.28, 27.33 ± 0.5, and 27 ± 0.5). However, maximum antibacterial effect 100% formulations produced zones of inhibitions against E. colip-value = 0.001. The mean zone of inhibition produced by F4 was greatest among all at 26.44 ± 0.37 mm (mean ± S.D). The F4 formulation produced a maximum percentage dissolution, permeation, and flux of 86.35 ± 0.576, 55.29 ± 0.127%, and 0.5532 ug/cm2/min, respectively. Conclusions: The present study therefore, suggests the use of S. acmella extract and olive oil containing emulgel for treating bacterial skin infections. Full article
(This article belongs to the Special Issue Gel Role in the World of the Cosmetic Research)
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19 pages, 8029 KiB  
Article
Detection by Sensitive Real-Time Reverse Transcription Loop-Mediated Isothermal Amplification of Olive Leaf Yellowing Associated Virus and Its Incidence in Italy and Spain
by Andrea Giovanni Caruso, Sofia Bertacca, Arianna Ragona, Graziella Agrò, Maria Isabel Font-San-Ambrosio, Ana Alfaro-Fernández, Rocío Estévez Sánchez, Stefano Panno and Salvatore Davino
Horticulturae 2023, 9(6), 702; https://doi.org/10.3390/horticulturae9060702 - 15 Jun 2023
Cited by 2 | Viewed by 2612
Abstract
Olive trees (Olea europea L.) are constantly threatened by many viruses, such as the olive leaf yellowing-associated virus (OLYaV), that belong to the Olivavirus genus, family Closteroviridae. In this work, the OLYaV incidence in different regions of Italy and Spain, which [...] Read more.
Olive trees (Olea europea L.) are constantly threatened by many viruses, such as the olive leaf yellowing-associated virus (OLYaV), that belong to the Olivavirus genus, family Closteroviridae. In this work, the OLYaV incidence in different regions of Italy and Spain, which represent the two most important European areas for olive production, was evaluated through the development of a real-time reverse transcription-loop-mediated isothermal amplification (RT-LAMP) for reliable and sensitive OLYaV detection. The specificity and accuracy of the developed real-time RT-LAMP assay were determined; the assay showed that potential cross-reactivity with other viruses belonging to the Closteroviridae family was excluded. The LAMP assay detected OLYaV with a higher sensitivity than conventional end-point RT-PCR, detecting a total of 1.34 × 10−2 genome copies. A total of 80 and 120 plants of different olive cultivars from Spain (Comunitat Valenciana, Andalusia) and Italy (Sicily, Calabria, Apulia, Lazio, and Umbria) regions were tested, respectively. The percentage of infected plants was 46.25% and 30% for Spain and Italy, respectively, while the most susceptible cultivars were “Serrana Espadán” and “Villalonga” from Comunitat Valenciana and Andalusia regions (Spain) and “Ogliarola barese” from Apulia region (Italy). In addition, the survey demonstrated that the real-time RT-LAMP showed good sensitivity for OLYaV-positive sample detection, especially on asymptomatic olive trees. For this reason, the developed assay could be very suitable for phytopathological laboratories as a reliable and efficient method for a rapid and sensitive routine test on olive samples. Full article
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21 pages, 2907 KiB  
Article
The Isolation and In Vitro Differentiation of Primary Fetal Baboon Tracheal Epithelial Cells for the Study of SARS-CoV-2 Host-Virus Interactions
by Bharathiraja Subramaniyan, Sunam Gurung, Manish Bodas, Andrew R. Moore, Jason L. Larabee, Darlene Reuter, Constantin Georgescu, Jonathan D. Wren, Dean A. Myers, James F. Papin and Matthew S. Walters
Viruses 2023, 15(4), 862; https://doi.org/10.3390/v15040862 - 28 Mar 2023
Cited by 3 | Viewed by 2720
Abstract
The mucociliary airway epithelium lines the human airways and is the primary site of host-environmental interactions in the lung. Following virus infection, airway epithelial cells initiate an innate immune response to suppress virus replication. Therefore, defining the virus-host interactions of the mucociliary airway [...] Read more.
The mucociliary airway epithelium lines the human airways and is the primary site of host-environmental interactions in the lung. Following virus infection, airway epithelial cells initiate an innate immune response to suppress virus replication. Therefore, defining the virus-host interactions of the mucociliary airway epithelium is critical for understanding the mechanisms that regulate virus infection, including Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). Non-human primates (NHP) are closely related to humans and provide a model to study human disease. However, ethical considerations and high costs can restrict the use of in vivo NHP models. Therefore, there is a need to develop in vitro NHP models of human respiratory virus infection that would allow for rapidly characterizing virus tropism and the suitability of specific NHP species to model human infection. Using the olive baboon (Papio anubis), we have developed methodologies for the isolation, in vitro expansion, cryopreservation, and mucociliary differentiation of primary fetal baboon tracheal epithelial cells (FBTECs). Furthermore, we demonstrate that in vitro differentiated FBTECs are permissive to SARS-CoV-2 infection and produce a potent host innate-immune response. In summary, we have developed an in vitro NHP model that provides a platform for the study of SARS-CoV-2 infection and other human respiratory viruses. Full article
(This article belongs to the Special Issue Multiple Hosts of SARS-CoV-2)
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12 pages, 877 KiB  
Article
A South American Mouse Morbillivirus Provides Insight into a Clade of Rodent-Borne Morbilliviruses
by Humberto J. Debat
Viruses 2022, 14(11), 2403; https://doi.org/10.3390/v14112403 - 29 Oct 2022
Cited by 5 | Viewed by 2395
Abstract
Morbilliviruses are negative-sense single-stranded monosegmented RNA viruses in the family Paramyxoviridae (order Mononegavirales). Morbilliviruses infect diverse mammals including humans, dogs, cats, small ruminants, seals, and cetaceans, which serve as natural hosts. Here, I report the identification and characterization of novel viruses detected [...] Read more.
Morbilliviruses are negative-sense single-stranded monosegmented RNA viruses in the family Paramyxoviridae (order Mononegavirales). Morbilliviruses infect diverse mammals including humans, dogs, cats, small ruminants, seals, and cetaceans, which serve as natural hosts. Here, I report the identification and characterization of novel viruses detected in public RNAseq datasets of South American long-haired and olive field mice. The divergent viruses dubbed Ratón oliváceo morbillivirus (RoMV) detected in renal samples from mice collected from Chile and Argentina are characterized by an unusually large genome including long intergenic regions and the presence of an accessory protein between the F and H genes redounding in a genome architecture consisting in 3′-N-P/V/C-M-F-hp-H-L-5′. Structural and functional annotation, genetic distance, and evolutionary insights suggest that RoMV is a member of a novel species within genus Morbillivirus tentatively named as South American mouse morbillivirus. Phylogenetic analysis suggests that this mouse morbillivirus is closely related to and clusters into a monophyletic group of novel rodent-borne morbilliviruses. This subclade of divergent viruses expands the host range, redefines the genomic organization and provides insights on the evolutionary history of genus Morbillivirus. Full article
(This article belongs to the Special Issue Drivers of Evolution of Animal RNA Viruses, Volume II)
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14 pages, 1403 KiB  
Article
Development of a Real-Time Loop-Mediated Isothermal Amplification Assay for the Rapid Detection of Olea Europaea Geminivirus
by Sofia Bertacca, Andrea Giovanni Caruso, Daniela Trippa, Annalisa Marchese, Antonio Giovino, Slavica Matic, Emanuela Noris, Maria Isabel Font San Ambrosio, Ana Alfaro, Stefano Panno and Salvatore Davino
Plants 2022, 11(5), 660; https://doi.org/10.3390/plants11050660 - 28 Feb 2022
Cited by 14 | Viewed by 3367
Abstract
A real-time loop-mediated isothermal amplification (LAMP) assay was developed for simple, rapid and efficient detection of the Olea europaea geminivirus (OEGV), a virus recently reported in different olive cultivation areas worldwide. A preliminary screening by end-point PCR for OEGV detection was conducted to [...] Read more.
A real-time loop-mediated isothermal amplification (LAMP) assay was developed for simple, rapid and efficient detection of the Olea europaea geminivirus (OEGV), a virus recently reported in different olive cultivation areas worldwide. A preliminary screening by end-point PCR for OEGV detection was conducted to ascertain the presence of OEGV in Sicily. A set of six real-time LAMP primers, targeting a 209-nucleotide sequence elapsing the region encoding the coat protein (AV1) gene of OEGV, was designed for specific OEGV detection. The specificity, sensitivity, and accuracy of the diagnostic assay were determined. The LAMP assay showed no cross-reactivity with other geminiviruses and was allowed to detect OEGV with a 10-fold higher sensitivity than conventional end-point PCR. To enhance the potential of the LAMP assay for field diagnosis, a simplified sample preparation procedure was set up and used to monitor OEGV spread in different olive cultivars in Sicily. As a result of this survey, we observed that 30 out of 70 cultivars analyzed were positive to OEGV, demonstrating a relatively high OEGV incidence. The real-time LAMP assay developed in this study is suitable for phytopathological laboratories with limited facilities and resources, as well as for direct OEGV detection in the field, representing a reliable method for rapid screening of olive plant material. Full article
(This article belongs to the Special Issue Epidemiology and Control of Plant Diseases)
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12 pages, 2472 KiB  
Article
Characterization of Spanish Olive Virome by High Throughput Sequencing Opens New Insights and Uncertainties
by Ana Belén Ruiz-García, Celia Canales, Félix Morán, Manuel Ruiz-Torres, Magdalena Herrera-Mármol and Antonio Olmos
Viruses 2021, 13(11), 2233; https://doi.org/10.3390/v13112233 - 6 Nov 2021
Cited by 9 | Viewed by 3465
Abstract
The use of high throughput sequencing (HTS) for the analysis of Spanish olive trees showing leaf yellowing discoloration, defoliation, and/or decline has provided new insights into the olive viruses present in Spain and has opened discussions about the pros and cons of these [...] Read more.
The use of high throughput sequencing (HTS) for the analysis of Spanish olive trees showing leaf yellowing discoloration, defoliation, and/or decline has provided new insights into the olive viruses present in Spain and has opened discussions about the pros and cons of these technologies for diagnostic purposes. In this study, we report for the first time in Spanish orchards the presence of olive leaf yellowing-associated virus (OLYaV), for which the second full coding sequence has been determined. This virus has also been detected in a putative vector, the psyllid Euphyllura olivina. In addition, the presence in Spain of Olea europaea geminivirus (OEGV), recently reported in Italy, has been confirmed, and the full-length sequence of two isolates was obtained by HTS and Sanger sequencing. These results, as well as the detection of other viral sequences related to olive latent virus 3 (OLV-3) and olive viral satellite RNA, raises questions on the biological significance of the findings, about the requirement of standardization on the interpretation of HTS results, and the necessity of additional tests to confirm the relevance of the HTS detection of viral sequences. Full article
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17 pages, 2862 KiB  
Article
Use of High-Throughput Sequencing and Two RNA Input Methods to Identify Viruses Infecting Tomato Crops
by Ayoub Maachi, Covadonga Torre, Raquel N. Sempere, Yolanda Hernando, Miguel A. Aranda and Livia Donaire
Microorganisms 2021, 9(5), 1043; https://doi.org/10.3390/microorganisms9051043 - 12 May 2021
Cited by 13 | Viewed by 4691
Abstract
We used high-throughput sequencing to identify viruses on tomato samples showing virus-like symptoms. Samples were collected from crops in the Iberian Peninsula. Either total RNA or double-stranded RNA (dsRNA) were used as starting material to build the cDNA libraries. In total, seven virus [...] Read more.
We used high-throughput sequencing to identify viruses on tomato samples showing virus-like symptoms. Samples were collected from crops in the Iberian Peninsula. Either total RNA or double-stranded RNA (dsRNA) were used as starting material to build the cDNA libraries. In total, seven virus species were identified, with pepino mosaic virus being the most abundant one. The dsRNA input provided better coverage and read depth but missed one virus species compared with the total RNA input. By performing in silico analyses, we determined a minimum sequencing depth per sample of 0.2 and 1.5 million reads for dsRNA and rRNA-depleted total RNA inputs, respectively, to detect even the less abundant viruses. Primers and TaqMan probes targeting conserved regions in the viral genomes were designed and/or used for virus detection; all viruses were detected by qRT-PCR/RT-PCR in individual samples, with all except one sample showing mixed infections. Three virus species (Olive latent virus 1, Lettuce ring necrosis virus and Tomato fruit blotch virus) are herein reported for the first time in tomato crops in Spain. Full article
(This article belongs to the Special Issue Plant Viruses: From Ecology to Control)
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9 pages, 1494 KiB  
Brief Report
Mouthwash Based on Ozonated Olive Oil in Caries Prevention: A Preliminary In-Vitro Study
by Gianna Maria Nardi, Sara Fais, Cinzia Casu, Marta Mazur, Roberto Di Giorgio, Roberta Grassi, Felice Roberto Grassi and Germano Orrù
Int. J. Environ. Res. Public Health 2020, 17(23), 9106; https://doi.org/10.3390/ijerph17239106 - 6 Dec 2020
Cited by 22 | Viewed by 4955
Abstract
(1) Background: Ozone (O3) proved to oxidize organic and inorganic compounds, and its efficacy against bacteria, viruses and fungi plasma membranes was of interest. Ozone vehicle can be a gaseous form, ozonated water or ozonized oil. The aim of this in-vitro study was [...] Read more.
(1) Background: Ozone (O3) proved to oxidize organic and inorganic compounds, and its efficacy against bacteria, viruses and fungi plasma membranes was of interest. Ozone vehicle can be a gaseous form, ozonated water or ozonized oil. The aim of this in-vitro study was to evaluate the efficacy of ozonated olive oil against Streptococcus mutans. (2) Methods: Two different commercial mouthwashes were tested: Ialozon Blu (IB) (Gemavip, Cagliari, Italy), with ozonated olive oil, and Ialozon Rose (IR) (Gemavip, Cagliari, Italy), with ozonated olive oil, hyaluronic acid and vitamin E. All formulates were analyzed in a dilution range from 2- to 256-folds in saline solution, as to reproduce the salivary dilution. Streptococcus mutans CIP103220 strain was used for the antimicrobial susceptibility test, and the Kirby–Bauer inhibition method was performed to evaluate the Minimum Inhibitory (MIC), Minimum Bactericidal (MBC), and Minimum Biofilm Inhibitory Concentration (MBIC). (3) Results: Both formulates showed the same antimicrobial activity. MIC, MBC, and MBIC were observed for dilution factors of 1/32, 1/8 and 1/8, respectively. The mean value of inhibition zone diameter was 16.5 mm for IB, and 18 mm for IR. (4) Conclusions: The results suggested that ozonized olive oil formulates were able to inactivate Streptococcus mutans avoiding the salivary dilution effect in the oral cavity. Full article
(This article belongs to the Special Issue Patient-Based Dentistry: Personalized Therapy and Prevention)
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17 pages, 3195 KiB  
Article
Molecular Characterization of the Complete Coding Sequence of Olive Leaf Yellowing-Associated Virus
by Ana Belén Ruiz-García, Thierry Candresse, Celia Canales, Félix Morán, Carlos Machado de Oliveira, Edson Bertolini and Antonio Olmos
Plants 2020, 9(10), 1272; https://doi.org/10.3390/plants9101272 - 27 Sep 2020
Cited by 10 | Viewed by 3704
Abstract
Genome organization and phylogenetic relationships of olive leaf yellowing-associated virus (OLYaV) with other members of the Closteroviridae family were determined. The complete coding sequence of OLYaV was obtained by high throughput sequencing of total RNA from a 35-year-old olive tree (cv. Zarzaleña) from [...] Read more.
Genome organization and phylogenetic relationships of olive leaf yellowing-associated virus (OLYaV) with other members of the Closteroviridae family were determined. The complete coding sequence of OLYaV was obtained by high throughput sequencing of total RNA from a 35-year-old olive tree (cv. Zarzaleña) from Brazil, showing olive leaf yellowing disease and deformations in the wood. This represents the first report of OLYaV in this country. A genomic sequence of 16,700 nt containing 11 open reading frames (ORFs) was recovered, representing the complete virus coding capacity. The knowledge of the nucleotide sequence of the genome including the gene that codes the coat protein will facilitate the development of diagnostic tests, which are limited so far to PCR-based methods targeting the HSP70h gene. Interestingly, a thaumatin-like protein (ORF2), previously reported in other unassigned viruses in the Closteroviridae family, persimmon virus B and actidinia virus 1, was identified in the OLYaV genome. Phylogenetic analysis of shared proteins (ORF1a, ORF1b, HSP70h, HSP90h and CP) with all members of the Closteroviridae family provides new insight into the taxonomic position of these three closteroviruses and suggests they could represent a new genus in the family. Full article
(This article belongs to the Special Issue Diagnosis and Control of Plant Viral Diseases)
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15 pages, 1578 KiB  
Article
Olive Mild Mosaic Virus Coat Protein and P6 Are Suppressors of RNA Silencing, and Their Silencing Confers Resistance against OMMV
by Carla MR Varanda, Patrick Materatski, Maria Doroteia Campos, Maria Ivone E. Clara, Gustavo Nolasco and Maria Do Rosário Félix
Viruses 2018, 10(8), 416; https://doi.org/10.3390/v10080416 - 9 Aug 2018
Cited by 13 | Viewed by 4226
Abstract
RNA silencing is an important defense mechanism in plants, yet several plant viruses encode proteins that suppress this mechanism. In this study, the genome of the Olive mild mosaic virus (OMMV) was screened for silencing suppressors. The full OMMV cDNA and 5 OMMV [...] Read more.
RNA silencing is an important defense mechanism in plants, yet several plant viruses encode proteins that suppress this mechanism. In this study, the genome of the Olive mild mosaic virus (OMMV) was screened for silencing suppressors. The full OMMV cDNA and 5 OMMV open reading frames (ORFs) were cloned into the Gateway binary vector pK7WG2, transformed into Agrobacterium tumefaciens, and agroinfiltrated into N. benthamiana 16C plants. CP and p6 showed suppressor activity, with CP showing significantly higher activity than p6, yet activity that was lower than the full OMMV, suggesting a complementary action of CP and p6. These viral suppressors were then used to induce OMMV resistance in plants based on RNA silencing. Two hairpin constructs targeting each suppressor were agroinfiltrated in N. benthamiana plants, which were then inoculated with OMMV RNA. When silencing of both suppressors was achieved, a significant reduction in viral accumulation and symptom attenuation was observed as compared to those of the controls, as well as to when each construct was used alone, proving them to be effective against OMMV infection. This is the first time that a silencing suppressor was found in a necrovirus, and that two independent proteins act as silencing suppressors in a virus member of the Tombusviridae family. Full article
(This article belongs to the Special Issue Plant-Virus Interactions)
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