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Keywords = interfacial binding energy

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20 pages, 10068 KiB  
Article
Effect of AF Surface Nanostructure on AFRP Interface Properties Under Temperature: A MD Simulation Study
by Zhaohua Zhang, Guowei Xia, Chunying Qiao, Longyin Qiao, Fei Gao, Qing Xie and Jun Xie
Polymers 2025, 17(15), 2024; https://doi.org/10.3390/polym17152024 - 24 Jul 2025
Viewed by 230
Abstract
The insulating rod of aramid fiber-reinforced epoxy resin composites (AFRP) is an important component of gas-insulated switchgear (GIS). Under complex working conditions, the high temperature caused by voltage, current, and external climate change becomes one of the important factors that aggravate the interface [...] Read more.
The insulating rod of aramid fiber-reinforced epoxy resin composites (AFRP) is an important component of gas-insulated switchgear (GIS). Under complex working conditions, the high temperature caused by voltage, current, and external climate change becomes one of the important factors that aggravate the interface degradation between aramid fiber (AF) and epoxy resin (EP). In this paper, molecular dynamics (MD) simulation software is used to study the effect of temperature on the interfacial properties of AF/EP. At the same time, the mechanism of improving the interfacial properties of three nanoparticles with different properties (insulator Al2O3, semiconductor ZnO, and conductor carbon nanotube (CNT)) is explored. The results show that the increase in temperature will greatly reduce the interfacial van der Waals force, thereby reducing the interfacial binding energy between AF and EP, making the interfacial wettability worse. Furthermore, the addition of the three fillers can improve the interfacial adhesion of the composite material. Among them, Al2O3 and CNT maintain a large dipole moment at high temperature, making the van der Waals force more stable and the adhesion performance attenuation less. The Mulliken charge and energy gap of Al2O3 and ZnO decrease slightly with temperature but are still higher than AF, which is conducive to maintaining good interfacial insulation performance. Full article
(This article belongs to the Special Issue Fiber-Reinforced Polymer Composites: Progress and Prospects)
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16 pages, 2229 KiB  
Article
Investigation of the Effect of Molecules Containing Sulfonamide Moiety Adsorbed on the FAPbI3 Perovskite Surface: A First-Principles Study
by Shiyan Yang, Yu Zhuang, Youbo Dou, Jianjun Wang, Hongwen Zhang, Wenjing Lu, Qiuli Zhang, Xihua Zhang, Yuan Wu and Xianfeng Jiang
Molecules 2025, 30(11), 2463; https://doi.org/10.3390/molecules30112463 - 4 Jun 2025
Viewed by 527
Abstract
First-principles calculations were conducted to examine the impact of three sulfonamide-containing molecules (H4N2O2S, CH8N4O3S, and C2H2N6O4S) adsorbed on the FAPbI3(001) perovskite [...] Read more.
First-principles calculations were conducted to examine the impact of three sulfonamide-containing molecules (H4N2O2S, CH8N4O3S, and C2H2N6O4S) adsorbed on the FAPbI3(001) perovskite surface, aiming to establish a significant positive correlation between the molecular structures and their regulatory effects on the perovskite surface. A systematic comparison was conducted to evaluate the adsorption stability of the three molecules on the two distinct surface terminations. The results show that all three molecules exhibit strong adsorption on the FAPbI3(001) surface, with C2H12N6O4S demonstrating the most favorable binding stability due to its extended frameworks and multiple electron-donating/withdrawing groups. Simpler molecules lacking carbon skeletons exhibit weaker adsorption and less dependence on surface termination. Ab initio molecular dynamics simulations (AIMD) further corroborated the thermal stability of the stable adsorption configurations at elevated temperatures. Electronic structure analysis reveals that molecular adsorption significantly reconstructs the density of states (DOS) on the PbI2-terminated surface, inducing shifts in band-edge states and enhancing energy-level coupling between molecular orbitals and surface states. In contrast, the FAI-terminated surface shows weaker interactions. Charge density difference (CDD) analysis indicates that the molecules form multiple coordination bonds (e.g., Pb–O, Pb–S, and Pb–N) with uncoordinated Pb atoms, facilitated by –SO2–NH2 groups. Bader charge and work function analyses indicate that the PbI2-terminated surface exhibits more pronounced electronic coupling and interfacial charge transfer. The C2H12N6O4S adsorption system demonstrates the most substantial reduction in work function. Optical property calculations show a distinct red-shift in the absorption edge along both the XX and YY directions for all adsorption systems, accompanied by enhanced absorption intensity and broadened spectral range. These findings suggest that sulfonamide-containing molecules, particularly C2H12N6O4S with extended carbon skeletons, can effectively stabilize the perovskite interface, optimize charge transport pathways, and enhance light-harvesting performance. Full article
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19 pages, 6726 KiB  
Article
Simulation of Aging and Bonding Properties of the Matrix/Filler Interface in Particle-Reinforced Composites
by Zebin Chen, Xueren Wang, Zijie Zou, Hongfu Qiang and Xiao Fu
Polymers 2025, 17(11), 1557; https://doi.org/10.3390/polym17111557 - 3 Jun 2025
Viewed by 563
Abstract
To investigate the microscopic mechanism of aging-induced “dewetting” at the matrix/filler interface in Nitrate Ester Plasticized Polyether (NEPE) propellant, this study decoupled the aging process into two factors: crosslinking density evolution and nitrate ester decomposition. Molecular dynamics (MD) simulations were employed to construct [...] Read more.
To investigate the microscopic mechanism of aging-induced “dewetting” at the matrix/filler interface in Nitrate Ester Plasticized Polyether (NEPE) propellant, this study decoupled the aging process into two factors: crosslinking density evolution and nitrate ester decomposition. Molecular dynamics (MD) simulations were employed to construct all-component matrix models and matrix/filler interface models with varying aging extents. Key parameters including crosslinking density, mechanical properties, free volume fraction, diffusion coefficients of the matrix, as well as interfacial binding energy and radial distribution function (RDF) were calculated to analyze the effects of both aging factors on “debonding”. The results indicate the following: 1. Increased crosslinking density enhances matrix rigidity, suppresses molecular mobility, and causes interfacial binding energy to initially rise then decline, peaking at 40% crosslinking degree. 2. Progressive nitrate ester decomposition expands free volume within the matrix, improves binder system mobility, and weakens nitrate ester-induced interfacial damage, thereby strengthening hydrogen bonding and van der Waals interactions at the interface. 3. The addition of a small amount of bonding agent improved the interfacial bonding energy but did not change the trend of the bonding energy with aging. Full article
(This article belongs to the Section Polymer Composites and Nanocomposites)
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16 pages, 7745 KiB  
Article
Investigation of a Novel Depressant for Flotation Separation of Chalcopyrite and Galena: Experiments and Adsorption Mechanisms
by Hong Zeng, Chongjun Liu, Tong Lu, Zehui Gao, Yangge Zhu, Chuanyao Sun, Zhiqiang Zhao, Guiye Wu, Ruidong Li and Jun Hu
Minerals 2025, 15(5), 454; https://doi.org/10.3390/min15050454 - 27 Apr 2025
Cited by 1 | Viewed by 389
Abstract
To reduce lead content in copper concentrates, this study developed a novel galena depressant, TA (thioureidoacetic acid). This study utilizes a synthetic mineral feed with fully liberated galena and chalcopyrite from separate sources to establish baseline separation conditions. The adsorption capability of TA [...] Read more.
To reduce lead content in copper concentrates, this study developed a novel galena depressant, TA (thioureidoacetic acid). This study utilizes a synthetic mineral feed with fully liberated galena and chalcopyrite from separate sources to establish baseline separation conditions. The adsorption capability of TA on galena surfaces was systematically investigated through micro-flotation tests, surface characterization, and first-principles calculations. Results demonstrate that TA effectively reduces galena recovery (from 82.92% to 12.29%) without compromising chalcopyrite flotation efficiency (>83.2% recovery) when using thionocarbamate (Z200) as the collector. FTIR and XPS analyses confirm that TA chemisorbs onto galena surfaces via its C=S and C=O functional groups. First-principles calculations reveal dual Pb-S and Pb-O bond formation during TA adsorption, resulting in stronger interfacial binding energy compared to Z200. This work establishes a molecular engineering framework for designing high-selectivity depressants. Full article
(This article belongs to the Special Issue Advances in Flotation of Copper, Lead and Zinc Minerals)
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17 pages, 2705 KiB  
Article
Evaluation of Hydrogen Trapping Capability at Interfaces Between Vanadium Carbide and Vanadium Nitride Nanoprecipitates with α-Fe by Density Functional Theory
by Shuaijun Yang, Yucheng Zhu, Chaoming Wang, Ruidong Li, Jun Hu and Zhong Chen
Coatings 2025, 15(4), 466; https://doi.org/10.3390/coatings15040466 - 15 Apr 2025
Viewed by 602
Abstract
The interface between dispersed compound nanoprecipitates and metal substrates can act as effective hydrogen traps, impeding hydrogen diffusion and accumulation, thus mitigating the risk of hydrogen embrittlement and hydrogen-induced coating failure. In this study, we considered the precipitation of vanadium carbide (VC) and [...] Read more.
The interface between dispersed compound nanoprecipitates and metal substrates can act as effective hydrogen traps, impeding hydrogen diffusion and accumulation, thus mitigating the risk of hydrogen embrittlement and hydrogen-induced coating failure. In this study, we considered the precipitation of vanadium carbide (VC) and vanadium nitride (VN) nanoprecipitates on a body-centered cubic Fe (α-Fe) substrate in the Kurdjumov–Sachs (K–S) orientation relationship. To evaluate the stability and hydrogen trapping ability of the interface, we used the first-principles method to calculate the interfacial binding energy and hydrogen solution energy. The results show that the stability of the interface was related to the type and length of bonding between atoms at the interface. The interface zone and the interface-like Fe zone have the best hydrogen trapping effect. We found that hydrogen adsorption strength depends on both the Voronoi volume and the number of coordinating atoms. A larger Voronoi volume and smaller coordination number are beneficial for hydrogen capture. When a single vacancy exists around the interface region, the harder it is to form a vacancy, and the more unstable the interface becomes. In addition to the C vacancy at the Baker–Nutting relationship interface found in previous studies being a deep hydrogen trap, the Fe and V vacancies at the α-Fe/VC interface and the V and N vacancies at the α-Fe/VN interface in the K–S relationship also show deep hydrogen capture ability. Full article
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15 pages, 3554 KiB  
Article
Study of ZrO2 Gate Dielectric with Thin SiO2 Interfacial Layer in 4H-SiC Trench MOS Capacitors
by Qimin Huang, Yunduo Guo, Anfeng Wang, Zhaopeng Bai, Lin Gu, Zhenyu Wang, Chengxi Ding, Yi Shen, Hongping Ma and Qingchun Zhang
Materials 2025, 18(8), 1741; https://doi.org/10.3390/ma18081741 - 10 Apr 2025
Viewed by 682
Abstract
The transition of SiC MOSFET structure from planar to trench-based architectures requires the optimization of gate dielectric layers to improve device performance. This study utilizes a range of characterization techniques to explore the interfacial properties of ZrO2 and SiO2/ZrO2 [...] Read more.
The transition of SiC MOSFET structure from planar to trench-based architectures requires the optimization of gate dielectric layers to improve device performance. This study utilizes a range of characterization techniques to explore the interfacial properties of ZrO2 and SiO2/ZrO2 gate dielectric films, grown via atomic layer deposition (ALD) in SiC epitaxial trench structures to assess their performance and suitability for device applications. Scanning electron microscopy (SEM) and atomic force microscopy (AFM) measurements showed the deposition of smooth film morphologies with roughness below 1 nm for both ZrO2 and SiO2/ZrO2 gate dielectrics, while SE measurements revealed comparable physical thicknesses of 40.73 nm for ZrO2 and 41.55 nm for SiO2/ZrO2. X-ray photoelectron spectroscopy (XPS) shows that in SiO2/ZrO2 thin films, the binding energies of Zr 3d5/2 and Zr 3d3/2 peaks shift upward compared to pure ZrO2. Electrical characterization showed an enhancement of EBR (3.76 to 5.78 MV·cm−1) and a decrease of ION_EBR (1.94 to 2.09 × 10−3 A·cm−2) for the SiO2/ZrO2 stacks. Conduction mechanism analysis identified suppressed Schottky emission in the stacked film. This indicates that the incorporation of a thin SiO2 layer effectively mitigates the small bandgap offset, enhances the breakdown electric field, reduces leakage current, and improves device performance. Full article
(This article belongs to the Special Issue Feature Papers in Materials Physics (2nd Edition))
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21 pages, 5469 KiB  
Article
The Interfacial Structure and Bonding Properties of the Al(111)/CrB2(0001) Interface: Insights for Advanced Al-Based Composites
by Jingwen Sun, Mingjie Wang, Ben Wang and Zhongxian Chen
Nanomaterials 2025, 15(7), 529; https://doi.org/10.3390/nano15070529 - 31 Mar 2025
Viewed by 320
Abstract
This research focuses on the structural and bonding characteristics of the Al(111)/CrB2(0001) interface, aiming to clarify the adhesion mechanisms of CrB2 coatings on aluminum composites. Utilizing first-principles calculations grounded in density functional theory (DFT), we systematically examined the interfacial properties of both [...] Read more.
This research focuses on the structural and bonding characteristics of the Al(111)/CrB2(0001) interface, aiming to clarify the adhesion mechanisms of CrB2 coatings on aluminum composites. Utilizing first-principles calculations grounded in density functional theory (DFT), we systematically examined the interfacial properties of both clean and doped Al(111)/CrB2(0001) systems. And key aspects such as binding energy, electron density distribution, and chemical bonding types were thoroughly evaluated. The results demonstrate that the Cr-terminated HCP stacking arrangement at the Al(111)/CrB2(0001) interface achieves the maximum adhesion work and minimal interfacial energy. This is primarily due to the strong covalent interactions between Al-p and Cr-p orbitals, which contribute to exceptional interfacial strength and stability. Furthermore, the incorporation of Fe, Mg, and Mn at the interface not only markedly improves working adhesion but also effectively lowers the interfacial energy for the Cr-terminated HCP stacking configuration. This phenomenon significantly enhances the overall bonding performance of the Al/CrB2 system. Conversely, the addition of Cu, Zn, and Si leads to an increase in interfacial energy, negatively impacting the bonding quality. Analysis of binding energies at the doped interface revealed a consistent trend among the elements: Fe > Mn > Mg > Si > Zn > Cu. These findings offer valuable guidance for the design and optimization of Al-based surface coatings with improved performance. Full article
(This article belongs to the Section Nanofabrication and Nanomanufacturing)
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21 pages, 12165 KiB  
Article
Microscopic Modeling of Interfaces in Cu-Mo Nanocomposites: The Case Study of Nanometric Metallic Multilayers
by Abdelhafid Akarou, Florence Baras and Olivier Politano
Metals 2025, 15(3), 282; https://doi.org/10.3390/met15030282 - 5 Mar 2025
Viewed by 1049
Abstract
Nanocomposites composed of Cu and Mo were investigated by means of molecular dynamics (MD) simulations to study the incoherent interface between Cu and Mo. In order to select an appropriate potential capable of accurately describing the Cu-Mo system, five many-body potentials were compared: [...] Read more.
Nanocomposites composed of Cu and Mo were investigated by means of molecular dynamics (MD) simulations to study the incoherent interface between Cu and Mo. In order to select an appropriate potential capable of accurately describing the Cu-Mo system, five many-body potentials were compared: three Embedded Atom Method (EAM) potentials, a Tight Binding Second Moment Approximation (TB-SMA) potential, and a Modified Embedded Atom Method (MEAM) potential. Among these, the EAM potential proposed by Zhou in 2001 was determined to provide the best compromise for the current study. The simulated system was constructed with two layers of Cu and Mo forming an incoherent fcc-Cu(111)/bcc-Mo(110) interface, based on the Nishiyama–Wassermann (NW) and Kurdjumov–Sachs (KS) orientation relationships (OR). The interfacial energies were calculated for each orientation relationship. The NW configuration emerged as the most stable, with an interfacial energy of 1.83 J/m², compared to 1.97 J/m² for the KS orientation. Subsequent simulations were dedicated to modeling Cu atomic deposition onto a Mo(110) substrate at 300 K. These simulations resulted in the formation of a dense layer with only a few defects in the two Cu planes closest to the interface. The interfacial structures were characterized by computing selected area electron diffraction (SAED) patterns. A direct comparison of theoretical and numerical SAED patterns confirmed the presence of the NW orientation relationship in the nanocomposites formed during deposition, corroborating the results obtained with the model fcc-Cu(111)/bcc-Mo(110) interfaces. Full article
(This article belongs to the Special Issue Design and Development of Metal Matrix Composites)
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11 pages, 2176 KiB  
Article
Impact of Solvents on the Crystal Morphology of CL-20/TFAZ Cocrystals: A Predictive Study
by Yuanyuan Sun, Le Yu, Yichen Wang and Nian-Tzu Suen
Compounds 2025, 5(1), 6; https://doi.org/10.3390/compounds5010006 - 20 Feb 2025
Viewed by 754
Abstract
The cocrystallization technique has been widely applied in the fields of energetic materials (EMs) to settle the inherent trade-off between high energy and low sensitivity in current high-energy molecules. Despite its widespread application, the mechanistic understanding of cocrystals growing from solutions remains largely [...] Read more.
The cocrystallization technique has been widely applied in the fields of energetic materials (EMs) to settle the inherent trade-off between high energy and low sensitivity in current high-energy molecules. Despite its widespread application, the mechanistic understanding of cocrystals growing from solutions remains largely underexplored. This paper presents a mechanistic model grounded in the spiral growth mechanism to predict the crystal morphologies of 2,4,6,8,10,12-hexanitro-2,4,6,8,10,12-hexaazaisowurtzitane (CL-20) and 7H-trifurazano [3,4-b:3′,4′-f:3″,4″-d]azepine (TFAZ) cocrystals. In this model, it was assumed that CL-20 and TFAZ molecules incorporated into the crystal lattice simultaneously from solution as preformed growth units. The binding energies between the CL-20 molecule and TFAZ molecule were calculated to determine the most potential growth units. The predicted morphologies closely align with the experimental determinations supporting the model’s validity. Furthermore, the study found that the crystal habits were significantly influenced by the choice of solvents, due to variations in interfacial energetics affecting the growth process. Full article
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18 pages, 4221 KiB  
Article
Competitive Adsorption Studies of Cd(II) and As(III) by Poly (Butylene Succinate) Microplastics: Based on Experimental and Theoretical Calculation
by Hui Jiang, Zhaoyao Ding, Xiaoling Lei, Xia Li, Sisi Que, Jinshan Zhou, Jiafeng Tang, Yuanyuan Huang and Da Sun
Water 2025, 17(1), 74; https://doi.org/10.3390/w17010074 - 31 Dec 2024
Cited by 1 | Viewed by 1038
Abstract
Microplastics (MPs) can serve as vectors for heavy metals in aquatic environments; however, the adsorption behavior of MPs on multiple heavy metal systems is still unclear. This study investigated the adsorption characteristics of biodegradable poly (butylene succinate) (PBS) for cadmium (Cd(II)) and arsenic [...] Read more.
Microplastics (MPs) can serve as vectors for heavy metals in aquatic environments; however, the adsorption behavior of MPs on multiple heavy metal systems is still unclear. This study investigated the adsorption characteristics of biodegradable poly (butylene succinate) (PBS) for cadmium (Cd(II)) and arsenic (As(III)) in both single and binary systems. Adsorption isotherms were studied using the Linear, Langmuir, and Freundlich models, and further analysis of MPs adsorption characteristics was conducted using site energy distribution theory and density functional theory. The results indicate that the maximum adsorption capacities of PBS for Cd(II) and As(III) are 2.997 mg/g and 2.606 mg/g, respectively, with the Freundlich model providing the best fit, suggesting multilayer adsorption on heterogeneous sites. As(III) has a higher adsorption affinity for PBS than Cd(II), with a binding energy of −11.219 kcal/mol. Additionally, the adsorption mechanisms of Cd(II) and As(III) on PBS include electrostatic interactions and surface complexation, with the primary adsorption sites at the C=O of the carboxyl group and the hydroxyl group. The comprehension of interfacial interactions between biodegradable plastics and heavy metals is facilitated by a combination of theoretical calculations and experimental investigations. Full article
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13 pages, 4597 KiB  
Article
Analysis of Interfacial Adhesion Properties Between PBT Azide Propellant Matrix and Defective AP Fillers Using Molecular Dynamics Simulations
by Xianzhen Jia, Linjing Tang, Ruipeng Liu, Hongjun Liao, Liang Cao, Xianqiong Tang and Peng Cao
Polymers 2024, 16(24), 3497; https://doi.org/10.3390/polym16243497 - 15 Dec 2024
Cited by 4 | Viewed by 1104
Abstract
Filler defects and matrix crosslinking degree are the main factors affecting the interfacial adhesion properties of propellants. Improving adhesion can significantly enhance debonding resistance. In this study, all-atom molecular dynamics (MD) simulations are employed to investigate the interfacial adsorption behavior and mechanisms between [...] Read more.
Filler defects and matrix crosslinking degree are the main factors affecting the interfacial adhesion properties of propellants. Improving adhesion can significantly enhance debonding resistance. In this study, all-atom molecular dynamics (MD) simulations are employed to investigate the interfacial adsorption behavior and mechanisms between ammonium perchlorate (AP) fillers and a poly(3,3-bis-azidomethyl oxetane)-tetrahydrofuran (PBT) matrix. This study focuses on matrix crosslinking degree (70–90%), AP defects (width 20–40 Å), and temperature effects (200–1000 K) to analyze microscopic interfacial adsorption behavior, binding energy, and radial distribution function (RDF). The simulation results indicate that higher crosslinking of the PBT matrix enhances interfacial adsorption strength, but incomplete crosslinking reduces this strength. Defects on the AP surface affect interfacial adsorption by altering the contact area, and defects of 30 Å width can enhance adsorption. The analysis of temperature effects on binding energy and interface RDF reveals that binding energy and interface RDF fluctuate as the temperature increases. This study provides a microscopic perspective on the PBT matrix–AP interfacial adsorption mechanism and provides insights into the design of PBT azide propellant fuels. Full article
(This article belongs to the Section Polymer Physics and Theory)
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11 pages, 4752 KiB  
Article
Microscopic Interactions Between Different Block Ratios of Styrene–Butadiene–Styrene and Asphalt During Their Miscibility
by Jinyang Deng, Yu Chen, Ke Cheng, Ning Xu, Jiaxin Chang and Gang Duan
CivilEng 2024, 5(4), 1161-1171; https://doi.org/10.3390/civileng5040056 - 11 Dec 2024
Cited by 1 | Viewed by 1036
Abstract
Styrene–butadiene–styrene (SBS)-modified asphalt is widely used in the field of road construction because it helps asphalt pavements achieve good road performance. However, SBS-modified asphalt has problems of poor compatibility, leading to insufficient thermal storage stability. As a block copolymer of styrene and butadiene, [...] Read more.
Styrene–butadiene–styrene (SBS)-modified asphalt is widely used in the field of road construction because it helps asphalt pavements achieve good road performance. However, SBS-modified asphalt has problems of poor compatibility, leading to insufficient thermal storage stability. As a block copolymer of styrene and butadiene, the compatibility of SBS with asphalt is also influenced by its styrene-to-butadiene (S/B) ratios. To reveal the compatibility mechanisms of different S/B ratios of SBS and asphalt during system stabilization, the interactions of SBS with asphalt at the molecular level were investigated in this study. Based on the molecular dynamics simulation method, interfacial models of SBS and asphalt were constructed; the miscible process of SBS in asphalt was simulated, with the characteristics of phase structure evolution and molecular distribution being analyzed; and the binding energy of the SBS/asphalt miscible systems was calculated. The results show that a higher butadiene content benefits the miscibility of SBS in asphalt and that the S/B ratios affect the interaction of SBS with asphalt and its components. SBS with a 3:7 ratio of styrene to butadiene exhibits stronger adsorption with the resin component and has the highest binding energy and best compatibility with asphalt. The findings contribute to the understanding of the miscibility and compatibility mechanisms between different S/B ratios of SBS and asphalt. Full article
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12 pages, 4115 KiB  
Article
Effect of Humidity on Interfacial Debonding Behavior Between Larger Graphene Sheet and Cement-Based Composites
by Yongliang Han, Yongzhe Zhao, Yijie Wang and Tong Chen
Coatings 2024, 14(11), 1470; https://doi.org/10.3390/coatings14111470 - 20 Nov 2024
Cited by 1 | Viewed by 884
Abstract
This paper investigates the interface debonding behavior of graphene (G) on a calcium silicate hydrate (C-S-H) substrate using molecular dynamics (MD) simulations. The effect of interfacial water content on the debonding behavior of graphene on cement-based composites was studied. Simulation results reveal that [...] Read more.
This paper investigates the interface debonding behavior of graphene (G) on a calcium silicate hydrate (C-S-H) substrate using molecular dynamics (MD) simulations. The effect of interfacial water content on the debonding behavior of graphene on cement-based composites was studied. Simulation results reveal that there is only a van der Waals force between G and C-S-H; the interface bonding strength is weak; and the debonding properties (maximum peeling force (Fmax) and work (W)) are low. The debonding energy of graphene decreases with an increase in interfacial water content, indicating that water intrusion will weaken the binding effect of G and C-S-H, and reduce the difficulty of graphene’s debonding on a C-S-H substrate. Exploring the adhesion behavior of graphene on C-S-H under the influence of humidity at the nanoscale is of great significance for understanding the basic adhesion mechanism, optimizing composite material properties, and promoting the development of related disciplines. Full article
(This article belongs to the Special Issue Recent Progress in Surface and Interface Properties of Nanostructures)
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20 pages, 12596 KiB  
Article
Molecular Dynamics-Based Study of Graphene/Asphalt Mechanism of Interaction
by Yinghua Fan, Lijun Sun, Chenqi Zhang, Jinzhi Xu, Jingwen Liu and Chun Wang
Appl. Sci. 2024, 14(14), 6168; https://doi.org/10.3390/app14146168 - 15 Jul 2024
Cited by 5 | Viewed by 1965
Abstract
This study employed molecular dynamics simulation to investigate the mechanism of action of graphene-modified asphalt. A series of molecular models of graphene-modified asphalt were constructed and validated using thermodynamic parameters. The impact of the graphene (PGR) size and number of layers on its [...] Read more.
This study employed molecular dynamics simulation to investigate the mechanism of action of graphene-modified asphalt. A series of molecular models of graphene-modified asphalt were constructed and validated using thermodynamic parameters. The impact of the graphene (PGR) size and number of layers on its interaction with asphalt components were examined, and the self-healing process and mechanism of action of PGR-modified asphalt were analyzed. The results demonstrated that the size and number of layers of PGR significantly influenced its interaction with asphalt components, with polar components demonstrating a stronger affinity for PGR. When the size and number of layers of PGR were held constant, the interfacial binding energy between it and ACR-modified asphalt was the highest, followed by SBS-modified asphalt, and 70# matrix asphalt exhibited the lowest interfacial binding strength. This interfacial binding strength is primarily attributed to intermolecular van der Waals interactions. Furthermore, the incorporation of multi-layer PGR can markedly enhance the mechanical properties of matrix asphalt, whereas small-sized PGR is more efficacious in improving the low-temperature performance of polymer-modified asphalt. PGR can act as a bridge between asphalt molecules through rapid heat transfer and π-π stacking with aromatic ring-containing substances, which markedly increases the free diffusion ability of asphalt molecules, shortens the healing time of asphalt, and enhances the collective self-healing performance of asphalt. This study provides an essential theoretical basis for understanding the mechanism and application of PGR in asphalt modification. Full article
(This article belongs to the Topic Application of Graphene-Based Materials, 2nd Edition)
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16 pages, 4300 KiB  
Article
Prediction of Protein-DNA Interface Hot Spots Based on Empirical Mode Decomposition and Machine Learning
by Zirui Fang, Zixuan Li, Ming Li, Zhenyu Yue and Ke Li
Genes 2024, 15(6), 676; https://doi.org/10.3390/genes15060676 - 23 May 2024
Viewed by 1715
Abstract
Protein-DNA complex interactivity plays a crucial role in biological activities such as gene expression, modification, replication and transcription. Understanding the physiological significance of protein-DNA binding interfacial hot spots, as well as the development of computational biology, depends on the precise identification of these [...] Read more.
Protein-DNA complex interactivity plays a crucial role in biological activities such as gene expression, modification, replication and transcription. Understanding the physiological significance of protein-DNA binding interfacial hot spots, as well as the development of computational biology, depends on the precise identification of these regions. In this paper, a hot spot prediction method called EC-PDH is proposed. First, we extracted features of these hot spots’ solid solvent-accessible surface area (ASA) and secondary structure, and then the mean, variance, energy and autocorrelation function values of the first three intrinsic modal components (IMFs) of these conventional features were extracted as new features via the empirical modal decomposition algorithm (EMD). A total of 218 dimensional features were obtained. For feature selection, we used the maximum correlation minimum redundancy sequence forward selection method (mRMR-SFS) to obtain an optimal 11-dimensional-feature subset. To address the issue of data imbalance, we used the SMOTE-Tomek algorithm to balance positive and negative samples and finally used cat gradient boosting (CatBoost) to construct our hot spot prediction model for protein-DNA binding interfaces. Our method performs well on the test set, with AUC, MCC and F1 score values of 0.847, 0.543 and 0.772, respectively. After a comparative evaluation, EC-PDH outperforms the existing state-of-the-art methods in identifying hot spots. Full article
(This article belongs to the Section Bioinformatics)
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