Search Results (156)

Cadmium (Cd) is a highly toxic heavy metal that can greatly affect crops and pose a threat to food security. Plant growth-promoting rhizobacteria (PGPR) are capable of alleviating the harm of Cd to crops. In this research, a Cd-tolerant PGPR strain was isolated and screened from the root nodules of semi-wild soybeans. The strain was identified as Pseudomonas sp. strain KM25 by 16S rRNA. Strain KM25 has strong Cd tolerance and can produce indole-3-acetic acid (IAA) and siderophores, dissolve organic and inorganic phosphorus, and has 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity. Under Cd stress, all growth indicators of soybean seedlings were significantly inhibited. After inoculation with strain KM25, the heavy metal stress of soybeans was effectively alleviated. Compared with the non-inoculated group, its shoot height, shoot and root dry weight, fresh weight, and chlorophyll content were significantly increased. Strain KM25 increased the superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities of soybean seedlings, reduced the malondialdehyde (MDA) content, increased the Cd content in the roots of soybeans, and decreased the Cd content in the shoot parts. In addition, inoculation treatment can affect the community structure of endophytic bacteria in the roots of soybeans under Cd stress, increasing the relative abundance of Proteobacteria, Bacteroidetes, Sphingomonas, Rhizobium, and Pseudomonas. This study demonstrates that strain KM25 is capable of significantly reducing the adverse effects of Cd on soybean plants while enhancing their growth. Full article

This study employs a machine learning approach to identify a small-molecule-based signature capable of predicting Alzheimer’s disease (AD). Utilizing metabolomics data from the plasma of a well-characterized cohort of 94 AD patients and 62 healthy controls; metabolite levels were assessed using the Biocrates MxP^® Quant 500 platform. Data preprocessing involved removing low-quality samples, selecting relevant biochemical groups, and normalizing metabolite data based on demographic variables such as age, sex, and fasting time. Linear regression models were used to identify concomitant parameters that consisted of the data for a given metabolite within each of the biochemical families that were considered. Detection of these “concomitant” metabolites facilitates normalization and allows sample comparison. Residual analysis revealed distinct metabolite profiles between AD patients and controls across groups, such as amino acid-related compounds, bile acids, biogenic amines, indoles, carboxylic acids, and fatty acids. Correlation heatmaps illustrated significant interdependencies, highlighting specific molecules like carnosine, 5-aminovaleric acid (5-AVA), cholic acid (CA), and indoxyl sulfate (Ind-SO₄) as promising indicators. Linear Discriminant Analysis (LDA), validated using Leave-One-Out Cross-Validation, demonstrated that combinations of four or five molecules could classify AD with accuracy exceeding 75%, sensitivity up to 80%, and specificity around 79%. Notably, optimal combinations integrated metabolites with both a tendency to increase and a tendency to decrease in AD. A multivariate strategy consistently identified included 5-AVA, carnosine, CA, and hypoxanthine as having predictive potential. Overall, this study supports the utility of combining data of plasma small molecules as predictors for AD, offering a novel diagnostic tool and paving the way for advancements in personalized medicine. Full article

With the increasing severity of global climate change and soil salinization, the development of microorganisms that enhance crop salt tolerance has become a critical focus of agricultural research. In this study, we explored the potential of a novel Streptomyces species Qhu-G9 as a plant growth-promoting rhizobacterium (PGPR) under salt stress conditions, employing whole-genome sequencing and functional annotation. The genomic analysis revealed that Qhu-G9 harbors various genes related to plant growth promotion, including those involved in phosphate solubilization, indole-3-acetic acid (IAA) biosynthesis, antioxidant activity, and nitrogen fixation. A total of 8528 coding genes were annotated in Qhu-G9, with a significant proportion related to cell metabolism, catalytic activity, and membrane transport, suggesting its broad growth-promoting potential. In vitro experiments demonstrated that Qhu-G9 exhibited strong iron siderophore production, IAA synthesis, phosphate solubilization, and 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity, all of which correlate with its plant growth-promoting capacity. Further plant growth trials revealed that Qhu-G9 significantly enhances the growth of Avena sativa and Onobrychis viciifolia seedlings under salt stress conditions, improving key physiological parameters, such as chlorophyll content, relative water content, and photosynthetic efficiency. Under salt stress conditions, inoculation with Qhu-G9 resulted in notable increases in total biomass, root length, and plant height. Biochemical analyses further confirmed that Qhu-G9 alleviates the oxidative damage induced by salt stress by boosting antioxidant enzyme activities, reducing peroxide levels, and promoting the accumulation of osmotic regulators. These findings suggest that Qhu-G9 holds great promise as a PGPR that not only promotes plant growth, but also enhances plant tolerance to salt stress; thus, it has significant agricultural potential. Full article

Piriformospora indica is a beneficial endophytic fungus that promotes plant growth and root development by colonizing plant roots. In order to investigate whether P. indica could promote the growth of tissue-cultured Cerasus humilis seedlings, in this study, we co-cultivated P. indica colony segments (P+) and P. indica spore suspensions (P++) in the rooting medium, and plant biomass as well as chlorophyll and root hormone contents of ‘3-19-3’ tissue-cultured C. humilis seedlings were determined under P+, P++, and CK (without fungus inoculation) treatments. The results showed that above-ground biomass and chlorophyll content of P+-and P++-treated tissue-cultured seedlings were significantly increased, and root peroxidase (POD), indole-3-acetic-acid (IAA) content, and root activities were significantly enhanced, while jasmonic acid (JA) and 1-aminocyclopropane-1-carboxylic acid (ACC) contents were reduced. Moreover, the growth-promoting effects of P++ treatment were found to be stronger than those of P+ treatment. Our results confirmed that P. indica was able to promote the growth of tissue-cultured C. humilis seedlings and effectively promoted root development by regulating hormone content. Therefore, the application of P. indica in the production of C. humilis is promising, especially in the cultivation of elite varieties. Full article

Matrix metalloproteinase-9 (MMP-9) and lipopolysaccharide (LPS) levels are known to be elevated in obesity and contribute to metabolic dysfunction. 2-(1′H-indole-3′-carbonyl)-thiazole-4-carboxylic acid methyl ester (ITE), an endogenous ligand of the aryl hydrocarbon receptor (AhR), has been implicated in the regulation of inflammatory responses. This study aimed to determine whether ITE can inhibit LPS-induced MMP-9 expression in monocytic cells and to explore the underlying signaling mechanisms involved. Human monocytic THP-1 cells and primary human monocytes were treated with LPS in the presence or absence of ITE. MMP-9 mRNA and protein levels were assessed using quantitative real-time PCR and ELISA, respectively, while gelatin zymography was employed to evaluate MMP-9 enzymatic activity. Chromatin immunoprecipitation followed by qPCR (ChIP-qPCR) was performed to assess NF-κB and AP-1 binding to the MMP-9 promoter region. Our findings demonstrate that ITE significantly suppresses LPS-induced MMP-9 gene and protein expression. This suppression is associated with a marked reduction in LPS-induced NF-κB and AP-1 transcriptional activity. ChIP-qPCR confirmed that ITE attenuates the recruitment of NF-κB and AP-1 to the MMP-9 promoter, thereby inhibiting its transcription. In summary, ITE downregulates LPS-induced MMP-9 expression by interfering with NF-κB/AP-1 signaling, suggesting a potential anti-inflammatory mechanism that could be relevant in the context of MMP-9-driven inflammatory conditions. Full article

Alginate oligosaccharides (AOSs) have been shown to be effective in enhancing crop growth. However, their functions in horticulture crops and growth-promoting mechanisms remain insufficiently characterized. This study employed pot cultivation experiments to investigate the effects of AOS root drenching (0, 15, 30, 45 mg·L⁻¹) on tomato (Solanum lycopersicum L.) seedling growth, photosynthetic performance, and phytohormone accumulation. The results showed that AOS promoted the leaf count per plant, leaf area of the youngest fully expanded leaves, shoot and root dry mass, chloroplast pigment contents and photosynthetic rate of tomato seedlings. And the 30 mg·L⁻¹ treatment consistently showed optimal efficacy, in which tomato seedlings also exhibited a significantly longer total root length, a larger root surface area and a greater number of root tips compared to the control. Phytohormone profiling revealed that AOS differentially regulated shoot/root phytohormones as follows: increasing auxins/cytokinins (CKs)/GA₁₉ content in shoots and Indole-3-acetic acid (IAA)/CKs/1-aminocyclopropane-1-carboxylic acid (ACC) content in roots, while decreasing root Jasmonic acid (JA)/5-deoxystrigol (5DS) contents. Finally, these findings demonstrate that AOS enhances tomato growth by coordinately reprogramming phytohormone homeostasis. Full article

Uranium plays an important role in the modern nuclear industry. However, such a radioactive element can also cause severe damage to the environment once leaked or discharged into water or air, having a huge impact on the safety of the biosphere. In this work, we pioneered the use of fluorescent monomers as imprinted units, which promoted fluorescence emission of the material. A novel porous aromatic framework was obtained with uranyl ion chelating sites, namely MIPAF-15. The unique N-O chelating pockets on the 4-bromo-1-H-indole-7-carboxylic acid gave rise to high coordination affinity toward uranyl ions, which enabled the fast adsorption rate of uranyl ions and a uranyl ion adsorption capacity of 44.88 mg·g⁻¹ at 298 K with an initial pH value of 6.0 and the uranyl concentration of 10 ppm. At the same time, the fluorescence quenching effect of MIPAF-15 was observed upon its adsorption of uranyl ions, which allowed the selective detection of uranyl ions with a detection limit of 5.04 × 10⁻⁸ M, lower than the maximum concentration of uranyl ions in drinking water specified by the World Health Organization (6.30 × 10⁻⁸ M) and United States Environmental Protection Agency (1.11 × 10⁻⁷ M). This kind of multifunctional porous material produces a favorable pathway for the detection, removal and degeneration of highly pollutive ions, promoting the overall sustainable development of the natural environment. Full article

The study of solid–liquid equilibria in small molecules such as l-tryptophan (l-Trp), which possesses an α-amino group, an α-carboxylic acid group, and an indole compound, presents significant challenges. This research introduces several findings aimed at enhancing process efficiency and sustainability in downstream processing of l-Trp from fermentative origin via crystallization. Transitioning from batch to continuous processes allows for improved scalability and resource management. Furthermore, solubility measurements combined with thermodynamic data from the literature will provide deeper insights into molecular interactions and allow for systematic and data-driven process design. Lab-scale crystallization experiments in both batch and continuous operation allow for the assessment of the process feasibility and solvent impacts on the process and product. The focus is on process development that emphasizes material savings through strategic solvent selection and co-solvent choices. Full article

Given the challenges of climate change, effective adaptation strategies for crops like coffee are crucial. This study evaluated twelve 1-aminocyclopropane-1-carboxylate deaminase-producing bacterial strains selectively isolated from the rhizosphere of Coffea arabica L. cv. Costa Rica 95 in a plantation located in Veracruz, Mexico, focusing on their potential to enhance drought resistance. The strains, representing seven genera from the Gamma-proteobacteria and Bacteroidota groups, were characterized for growth-promoting traits, including ACC deaminase activity, indole-3-acetic acid (IAA) synthesis, phosphates solubilization, siderophore production, and nitrogen fixation. Strains of the genus Pantoea exhibited higher ACC deaminase activity, phosphate solubilization, and IAA synthesis, while others, such as Sphingobacterium and Chryseobacterium, showed limited plant growth-promoting traits. A pot experiment was conducted with coffee plants subjected to either full irrigation (soil with 85% volumetric water content) or drought (soil with 55% volumetric water content) conditions, along with inoculation with the isolated strains. Plants inoculated with Pantoea sp. RCa62 demonstrated improved growth metrics and physiological traits under drought, including higher leaf area, relative water content (RWC), biomass, and root development compared to uninoculated controls. Similar results were observed with Serratia sp. RCa28 and Pantoea sp. RCa31 under full irrigation conditions. Pantoea sp. RCa62 exhibited superior root development under stress, contributing to overall plant development. Proline accumulation was significantly higher in drought-stressed, non-inoculated plants compared to those inoculated with Pantoea sp. RCa62. This research highlights the potential of Pantoea sp. RCa62 to enhance coffee plant resilience to drought and underscores the need for field application and further validation of these bioinoculants in sustainable agricultural practices. Full article

This study explores the potential anti-H1N1 Influenza A activity of bioactive compounds extracted from Streptomyces ardesiacus, a marine-derived microorganism known for producing diverse secondary metabolites. Four major compounds—1-acetyl-β-carboline, 1H-indole-3-carbaldehyde, anthranilic acid, and indole-3-carboxylic acid—were isolated and characterized through NMR. Among these, the identified structure of 1-acetyl-β-carboline showed the highest IC₅₀ effect, with a dose of 9.71 μg/mL in anti-influenza assays. Using network pharmacology and molecular docking analyses, the interactions of these compounds with key proteins involved in H1N1 pathogenesis were examined. Protein–protein interaction (PPI) networks and Gene Ontology enrichment analysis revealed CDC25B, PARP1, and PTGS2 as key targets, associating these compounds with pathways related to catalytic activity, inflammation, and cell cycle regulation. The molecular docking results demonstrated that 1-acetyl-β-carboline exhibited binding affinities comparable to Tamiflu, the positive control drug, with LibDock scores of 81.89, 77.49, and 89.21 for CDC25B, PARP1, and PTGS2, respectively, compared to Tamiflu’s scores of 84.34, 86.13, and 91.29. These findings highlight the potential of the active compound 1-acetyl-β-carboline from S. ardesiacus as a novel anti-influenza agent, offering insights into their molecular mechanisms of action. The results support further in vitro and in vivo studies to validate the observed inhibitory mechanisms and therapeutic applications against H1N1 Influenza A. Full article

Ethyl 3-formyl-1H-indol-2-carboxylate (FIC) and 2-(4-methoxyphenyl)-2,4-dihydropyrrolo [3,4-b]indol-3-ol (MPI) were synthesized as indole derivatives. The chemical structures of FIC and MPI were established through analytical and spectroscopic techniques. The inhibitory impacts of FIC and MPI on mild steel (MS) in an acidic environment (0.5 M H₂SO₄) were investigated by employing methodologies including open circuit potential (OCP), electrochemical impedance spectroscopy (EIS), and potentiodynamic polarization (PDP). As the studied indole derivatives adsorbed on the surface of MS, they created a barrier to mass and charge movement, shielding the MS from dangerous ions. It was observed that the inhibitory efficiency (%EF) values increased with the molar concentration of indole derivatives (FIC and MPI). At all concentrations, the two indole derivatives being studied, FIC and MPI, had high efficiency values. The highest efficiencies at 90 ppm were 81.2% with MPI and 76.2% with FIC. The polarization curves also clearly showed that MPI and FIC function as mixed-type inhibitors. Additionally, this study used density functional theory (DFT) and molecular dynamics (MD) simulations to investigate how well the two indole derivatives prevented mild steel corrosion. Full article

We describe the design and synthesis of a series of 7-(N-aryl pyrrolidinyl) indoles and oxo-analogs as isosteric mimics of the DCAF15 binder E7820, a well-known member of aryl sulfonamides known as SPLAMs. The functionalization of C-7 in indoles was achieved by metal-catalyzed CH-activation with unexpected results. Binding assays revealed the pyrrolidine N-aryl carboxylic acid analog to be as equally active as E7820. Full article

To discover novel fungicides with good inhibitory effects on plant fungal diseases, twenty-five 3-indolyl-3-hydroxy oxindole derivatives (3a–3y) were synthesized. These newly derivatives were characterized by NMR and HRMS. Their antifungal activities against five plant pathogenic fungi were assessed in vitro. Most of the compounds exhibited moderate to excellent antifungal activities against the five pathogenic fungi. Notably, compounds 3t, 3u, 3v, and 3w displayed remarkable and broad-spectrum antifungal activities comparable to or superior to those of the fungicides carvacrol (CA) and phenazine-1-carboxylic acid (PCA). Among them, compound 3u displayed the most excellent antifungal activity against Rhizoctonia solani Kühn (R. solani), with an EC₅₀ of 3.44 mg/L, which was superior to CA (7.38 mg/L) and PCA (11.62 mg/L). Preliminary structure–activity relationship (SAR) results indicated that the introduction of I, Cl, or Br substituents at position 5 of the 3-hydroxy-2-oxindole and indole rings is crucial for compounds to exhibit good antifungal activity. The in vivo antifungal activity assay showed that compound 3u has good curative effects against R. solani. The current results suggest that these compounds are capable of serving as promising lead compounds. Full article

Interstock, located between rootstock and scion, plays a critical role in determining graft compatibility. This study aimed to elucidate the physiological mechanisms mediated by interstock in graft compatibility by comparing various leaf and root system parameters between compatible and incompatible graft combinations. These parameters included growth parameters, photosynthetic pigments, carbohydrates, antioxidant enzyme systems, and hormones. The study found that both PG (‘Yuanxiaochun’/‘Ponkan’/‘Trifoliate orange’) and JJ (‘Yuanxiaochun’/‘Kumquat’/‘Trifoliate orange’) treatments exhibited a noticeable phenomenon of “small feet” (scion diameter exceeding interstock), indicating mild graft incompatibility. Compared to grafted compatibility groups, chlorophyll content in PG and JJ treatments leaves was significantly reduced, particularly in carotenoids (Car). Additionally, PG and JJ treatments leaves showed lower levels of total soluble sugars, fructose, sucrose, gibberellin A4, zeatin-Riboside, and N6-(delta2-isopentenyl) adenosine, as well as catalase (CAT) activity. In contrast, peroxidase (POD) activity, glucose, soluble proteins, hydrogen peroxide (H₂O₂), malondialdehyde (MDA), aminocyclopropane carboxylic acid, and abscisic acid content were higher. In roots, PG and JJ treatments had elevated starch, sucrose, jasmonic acid, and jasmonic acid-isoleucine content, but showed lower levels of total soluble sugars, MDA, indole-3-acetic acid, and abscisic acid. Comprehensive analysis revealed that total soluble sugar content in both leaves and roots under PG and JJ treatments were reduced. These findings offer valuable insights into enhancing citrus grafting practices, particularly by guiding the selection of compatible rootstock-scion combinations. By elucidating the physiological mechanisms underlying graft compatibility, this research enables researchers and growers to refine grafting strategies, thereby improving citrus grafting success rates. Full article

Ficus trees (Moraceae) play a vital role in sustaining the stability of tropical and subtropical rainforests. The obligate mutualism between Ficus species and their pollinating fig wasps renders them an exemplary model for investigating insect–plant coevolution. In this study, we employed Ficus hispida Linn. f., an ecologically significant fig species in tropical rainforests, to conduct a wasp-introduction controlled experiment in the field. This method enabled us to precisely delineate the developmental stages of figs. We collected samples at specific intervals and examined the impact of pollinating fig wasp entry on the hormonal metabolism of male and female figs using liquid chromatography–tandem mass spectrometry analysis. The findings demonstrate that pollinator entry significantly decreases fig abscission. Moreover, it substantially altered the developmental indices of the figs. Unpollinated figs exhibit elevated levels of abscisic acid (ABA), which increases the likelihood of fig abortion and reduces the probability of pollinator entry into senescent figs. Following pollinator entry, indole-3-acetic acid (IAA) levels rise in both male and female figs. Male figs show higher concentrations of 1-aminocyclopropane-1-carboxylic acid (ACC), jasmonic acid (JA), and salicylic acid (SA), whereas these changes are less pronounced in female figs. Additionally, pollinated male figs display increased levels of cytokinins (CKs) and other hormones compared to female figs, suggesting a coordinated hormonal response to the stress induced by pollinator oviposition and gall development. Our findings suggest that the entry of pollinators likely triggers the transition from the female to the interfloral phase, with hormonal regulation playing a crucial role in the reproductive dimorphism of figs. This research can offer novel insights into the mechanisms underlying fig–wasp mutualism. Full article