Search Results (166)

Soybean is a dual-purpose crop for food and oil, playing a crucial role in China’s grain production. Seed size and weight are key agronomic traits directly influencing the yield. Cytokinin oxidases/dehydrogenases (CKXs) specifically degrade certain isoforms of endogenous cytokinins (CKs), thereby modulating plant growth and seed development. However, their role in soybeans remains largely uncharacterized. In a previous genome-wide association study of 250 soybean core germplasms, we identified GmCKX3 as a yield-related gene. To elucidate its function, we developed GmCKX3-deficient mutants using CRISPR/Cas9 gene editing in soybean Williams82 and conducted a three-year phenotypic analysis. Loss of GmCKX3 function significantly enhanced the seed size and weight, which was attributed to an increased cell size and fat accumulation in the endosperm. This enhancement was driven by elevated endogenous CK levels resulting from suppressed GmCKX3 expression. Subcellular localization revealed that GmCKX3 resides in the endoplasmic reticulum and predominantly degrades the isopentenyladenine (iP)-type CK. Integrated transcriptomic and metabolomic analyses uncovered key genes and pathways involved in CK regulation, supporting GmCKX3’s central role in seed-trait modulation. These findings advance our understanding of cytokinin-mediated seed development and offer promising targets for molecular breeding aimed at improving the soybean yield. Full article

Selenium (Se) is an important micronutrient for the maintenance of human health. In China, however, the population is more severely deficient in Se. Soybean is an important grain and oil crop in the world and serves as a major dietary source. The development of Se biofortification of soybeans may be an effective measure to address human Se deficiency. Arbuscular mycorrhizal fungi (AMF) are ubiquitous soil microorganisms that can enhance nutrient uptake in host plants. So, it is necessary to investigate whether soybean inoculated with AMF can biofortificate Se. In this experiment, we studied the impact of the exogenous application of three Se species (selenite, selenate, and selenomethionine) and two AMF species (Funneliformis mosseae and Glomus versiforme) on Se uptake in soybean seedlings. The results showed that the inoculation of AMF significantly (p < 0.05) improved biomass and P concentration in soybeans. Regardless of exogenous Se addition, the inoculation of AMF improved the Se transfer factor and significantly (p < 0.05) increased Se translocation to the soybean shoot. The inoculation of AMF also significantly (p < 0.05) increased the percentage of available Se in soil with selenite addition. Based on these findings, the combined application of exogenous Se and AMF inoculation represents a viable strategy for the Se biofortification of soybeans. Full article

Maize is one of the top five field crops worldwide and is indispensable as animal feed, serves as a raw material in many industries, and is a staple for human food. However, its production is under increasing pressure mainly due to abiotic stress. Drought and excessive precipitation, air temperature fluctuations, and reduced soil fertility due to inadequate soil pH reactions are among the biggest challenges that must be overcome. Therefore, the goal of this study was to determine the effects of these combined stressful abiotic conditions on maize grain yield and quality and to determine the genetic-specific response of maize genotypes in such conditions. The experiment was set up in eastern Croatia according to the randomized complete block design in four replications. A total of 10 maize hybrids of different FAO maturity groups were evaluated across four diverse environments, each subjected to one or two abiotic stresses (extreme precipitation, drought, high air temperatures, and acidic soil). Analysis of variance revealed that all treatment effects were statistically significant, except for the effect of hybrids on grain yield. Depending on the effect of abiotic stress, the variations among environments were up to 51.4% for yield and up to 12.1%, 18.9%, and 0.81% for protein, oil, and starch content, respectively. Differences among hybrids were less pronounced for yield (7.9%), while for protein (13.5%), oil (17.3%), and starch content (1.5%) were similar. However, the largest variation was found for the interaction effect. In the conducted research, ENV2 recorded the highest grain yield, along with the highest oil and starch content, as well as the second-highest protein content, while the hybrid effect remained unclear. Generally, ENV4 had the greatest negative impact due to the combined effects of extreme abiotic stresses, including soil acidity, drought, and high air temperatures. Full article

Soybean (Glycine max L.) is a vital grain and oil crop, serving as a primary source of edible oil, plant-based protein, and livestock feed. Its production is crucial for ensuring global food security. However, soybean yields are severely impacted by various diseases, and the development of disease-resistant cultivars remains the most sustainable strategy for mitigating these losses. While stable genetic transformation is a common approach for studying gene function, virus-induced gene silencing (VIGS) offers a rapid and powerful alternative for functional genomics, enabling efficient screening of candidate genes. Nevertheless, the application of VIGS in soybean has been relatively limited. In this study, we established a tobacco rattle virus (TRV)-based VIGS system for soybean, utilizing Agrobacterium tumefaciens-mediated infection. The TRV vector was delivered through cotyledon nodes, facilitating systemic spread and effective silencing of endogenous genes. Our results demonstrate that this TRV–VIGS system efficiently silences target genes in soybean, inducing significant phenotypic changes with a silencing efficiency ranging from 65% to 95%. Key genes, including phytoene desaturase (GmPDS), the rust resistance gene GmRpp6907, and the defense-related gene GmRPT4, were successfully silenced, confirming the system’s robustness. This work establishes a highly efficient TRV–VIGS platform for rapid gene function validation in soybean, providing a valuable tool for future genetic and disease resistance research. Full article

Studies in multiple species have shown that phospholipid:diacylglycerol acyltransferase (PDAT) and oil bodies are important factors affecting plant oil accumulation. Although the PDAT gene family has been extensively studied in many plants, it has not yet been systematically analyzed in Brassica napus. In this study, we identified four PDAT family members in B. napus, which were divided into two subfamilies based on phylogenetic analysis. These members share conserved motifs and gene structures, with multiple cis-acting elements related to plant hormones and abiotic stress in their promoter regions. Transcriptome sequencing revealed that most BnaPDAT genes are highly expressed during the late stages of seed development, with expression differences under various abiotic stresses and in materials with varying oleic acid content. To further investigate the effects of the PDAT gene on seed oil content and fatty acid composition in Brassica napus, we constructed transgenic plants overexpressing BnaA02.PDAT1 under the control of the 35S promoter. The results showed that compared to wild type (WT), the thousand-seed weight of BnaA02.PDAT1 transgenic plants increased significantly by 12.95–14.76%. Additionally, the total oil content in transgenic seeds was 1.86–2.77% higher than that of WT. Furthermore, the fatty acid composition in the seeds was also altered. This study confirms the critical role of BnaPDAT genes in B. napus seed development and their impact on oil accumulation. Full article

Maize is considered to be one of the most significant crops in the world. On a global scale, the appropriate yield level of food can largely affect food security. During cultivation, this plant is exposed to many adverse environmental factors, including water deficiency. Plant stress is reduced by applying appropriate biostimulants or soil amendments. This study tested the effectiveness of preparations based on Rhizophagus irregularis, humic acids, Bacillus velezensis + Bacillus licheniformis and Methylobacterium symbioticum. The aim of the project was to assess the effect of selected microorganisms and substances on the growth, yield, and physiological parameters of maize. The hypothesis assumed that the preparations selected for this study could improve the condition of the plants in various soil moisture conditions. All treatments were carried out post-emergence. The experiments were conducted in greenhouse conditions, where, in conditions of different level of soil moisture, optimal and water deficiency, the effect of the above-mentioned substances and microorganisms on the height, mass of plants, and plant chlorophyll fluorescence was determined. Chlorophyll, anthocyanin, and flavonol content were also measured. In two-year field studies, the effect of the same preparations on plant height, grain yield, thousand-grain weight, oil, protein, and starch content in the grain was determined. It was shown that appropriately selected biostimulants have a positive effect on plant growth, physiological parameters, and the yield of maize grain. The impact of preparations on the grain yield depended on the conditions that prevailed in the growing season. Full article

The organic carbon content of soil (SOC) is considered a key factor for soil health and plays an important role in climate change. Conservation tillage systems promote carbon sequestration and reduce greenhouse gas emissions. A long-term field experiment with different soil tillage practices (conventional tillage—CT; reduced tillage—RT; and no tillage—NT) has been conducted in Prague-Ruzyně (Czech Republic) since 1995. The soil’s organic carbon content, microbial biomass (C_mic), and enzymatic characteristics were evaluated in four-year crop rotation periods from 2005 to 2024. The crop rotation was as follows: winter oil seed rape, winter wheat, pea, and winter wheat. The following soil layers were studied: 0–10, 10–20, and 20–30 cm. Crop residues remained in the field and were incorporated into the soil according to the used tillage—completely under CT, partly under RT, and the remaining mulch under NT. Under RT and NT, the SOC, C_mic, and enzymatic activity were concentrated in the top soil layer and decreased in deeper layers, whereas all these characteristics were evenly distributed across the soil layers under the CT practice. The SOC content increased gradually in the whole soil profile (0–30 cm) from 51.0 t ha⁻¹ on average in 2005–2008 to 56.0 t ha⁻¹ in 2021–2024 under CT. An SOC increase from 57.4 to 63.1 t ha⁻¹ under RT and from 61.1 to 65.7 t ha⁻¹ under NT was noted in 2017–2020, after which the stagnation in SOC content was observed in the years of 2021–2024. Similarly, a lower C_mic and enzymatic activity were found in the same period. The highest C sequestration was found under NT; an increase of 571 kg C ha⁻¹ year⁻¹ was recorded from the establishment of the experiment in 1995 to 2024. This was followed by the RT and CT practices (462 and 221 kg C ha⁻¹ year⁻¹, respectively). The average winter wheat yields and nitrogen content in grain were higher under CT (8.67 t ha⁻¹, 2.16% N) and RT (8.97 t ha⁻¹, 2.13% N) than under NT (8.23 t ha⁻¹, 2.03% N). The weather conditions during the year (abundance of precipitation) influenced crop yields significantly more than the tillage practices. Conservation tillage practices increase the organic carbon and microbial activity in soils, but climate change associated with higher average temperatures can affect these processes. Full article

The seed-coat color and seed size have an impact on both the evolutionary fitness and the grain yield of crops. Soybean is a major oil crop, and the seed-coat color and seed size exhibit natural diversity among the different soybean varieties. Here, we found an R2R3-MYB transcription factor of GmMYB62, which shows a significant increase in expression as the seed-coat color changes from yellow to black in different soybean varieties. The GmMYB62 was specifically highly expressed in reproductive organs, especially in floral organs in soybeans. The GmMYB62 encodes a nuclear protein that contains two MYB domains. In the phylogenetic analysis, the GmMYB62 was relatively conserved after the divergence of the monocots and dicots, and it also grouped with transcriptional repressors of MYBs in anthocyanin synthesis. The GmMYB62 was overexpressed in Arabidopsis and the seeds displayed a pale-brown coat in GmMYB62 overexpression lines, in contrast to the dark-brown seed coat observed in wild-type of Col-0. The anthocyanin content in the GmMYB62 overexpression lines was dramatically reduced when compared to Col-0. Additionally, the seeds in overexpression lines showed shorter lengths, larger widths, and lower thousand-seed weights than those in Col-0. Furthermore, the genes related to anthocyanin synthesis and seed size regulation were investigated, and expression of eight genes that involved in anthocyanin synthesis pathway, like chalcone synthase (CHS), chalcone isomerase (CHI), flavanone 3-hydroxylase (F3H), and anthocyanidin synthase (ANS) were severely inhibited in the GmMYB62 overexpression lines when compared to Col-0. In addition, the ARGOS-LIKE (ARL), B-Type Cyclin 1 (CYCB1), and enhancer of DA1-1 (EOD3), which govern cell expansion and proliferation, were highly expressed in GmMYB62 overexpression lines when compared to Col-0. Overall, this study sheds new light on the control of seed-coat color and seed size by GmMYB62 and provides potentially valuable targets for improving crop seed quality. Full article

In recent years, there has been widespread cultivation of high-quality rice along the southeast coast of China, particularly in Shanghai. However, the specific changes in the yield and quality performance of rice in the Shanghai region have not been well understood. A study conducted on 194 rice varieties in the Shanghai region from 1994 to 2023 focused on yield, growth characteristics, and quality. The findings revealed significant increases in rice yield (+16.8%) and spikelets per panicle (+45.4%) in the Shanghai region over the past 30 years, along with a decrease in amylose content (−27.9%). However, parameters such as grain filling, 1000-grain weight, plant height, panicle length, chalkiness, and gel consistency showed no significant changes over the same period. Additionally, the study found that the yield, nitrogen application amount, growth period, and head rice rate of japonica rice and indica-japonica hybrid rice were higher than those of indica rice, although the panicle length was lower in comparison. Japonica inbred rice exhibited the lowest amylose content and superior taste. Correlation analyses suggested that the breeding of japonica rice varieties in the Shanghai region should focus on balancing nitrogen absorption and high chalkiness, plant biomass, and amylose content, and yield and the appearance and taste quality of rice. In addition, the potential rice yield per unit area in the Shanghai region in the future depends on the promotion of hybrid japonica rice planting and developing best management practices. Full article

Fusarium fujikuroi is the primary causal agent of rice bakanae disease, which can lead to substantial yield losses. Developing a rapid, highly specific, and accurate method for detecting F. fujikuroi is crucial for effective surveillance, prevention, and control of rice bakanae disease. In this study, a novel detection assay, RPA-Cas12a-F, was developed by integrating recombinase polymerase amplification (RPA) and Cas12a for the detection of F. fujikuroi. This assay demonstrated a limit of detection (LOD) of 1 copy/μL of reference plasmid or 0.1 fg/μL of F. fujikuroi genomic DNA (gDNA). Furthermore, to enable on-site detection, the RPA-Cas12a technique was combined with a lateral flow strip (LFS) for visual readout, thereby developing the RPA-Cas12a-LFS assay. The LOD of the RPA-Cas12a-LFS assay was 1000 copies/μL of plasmid or 10 fg/μL of F. fujikuroi gDNA. The RPA-Cas12a-based assays developed in this study enable rapid, highly accurate, sensitive, and specific detection of F. fujikuroi, making them a promising tool for on-site detection without the need for expensive equipment and time-consuming methodologies. Full article

Plant height is an important agronomic trait that affects the establishment of the ideal plant type and yield formation of rapeseed. However, the genetic mechanism affecting plant height has not been fully elucidated. Building on previous genome-wide association studies (GWASs), we performed differential gene expression analysis using 14 shoot apex transcriptome datasets derived from materials exhibiting extreme seedling height phenotypes at the bud stage. The promoter and the first exon regions of the Glycosylphosphatidylinositol 2 gene (BnGPI2-A03) of rapeseed were identified as harboring two significant SNPs (Bn-A03-p717776 and Bn-A03-p7178917) associated with plant height. Co-expression network analysis shows that BnGPI2-A03 was associated with many hormone pathway genes, cell wall synthesis pathway genes, and transcription factor genes and formed a potential network regulating the plant height of rapeseed. To examine the function of BnGPI2-A03 on plant height in Brassica napus L., we generated transgenic plants in which BnGPI2-A03 was overexpressed using a 35 s promoter. Overexpression of BnGPI2-A03 elevated the height and main inflorescence length of the transgenic plant by an average of 17.95% and 25.92%, respectively, which showed a positive relationship with the level of BnGPI2-A03. Transcriptome sequencing analysis of the overexpressed transgenic rapeseed stem-tip tissue during the bud stage shows that BnGPI2-A03 is associated with plant cell wall synthesis and cell division pathways. The requirement of BnGPI2-A03 for plant height was further evidenced in natural germplasms by the higher expression levels of BnGPI2-A03 in the stem-tip tissue of extremely high genotypes (Hap1) relative to their ultra-short counterparts (Hap3). These discoveries highlight potential targets for the plant height genetic improvement of rapeseed in the future. Full article

Winter oilseed rape is particularly vulnerable to waterlogging stress during its growth and development stages, especially at the podding stage, leading to impaired photosynthesis, reduced antioxidant enzyme activity, and significant declines in yield and oil content. Previous studies have demonstrated that exogenous plant growth regulators, such as salicylic acid (SA) and abscisic acid (ABA), enhance crop resistance to abiotic stresses. Nevertheless, their combined application for winter oilseed rape recovery under waterlogging stress remains underexplored. In this study, a pot experiment was conducted to investigate the effects of SA, ABA, and their combination on the growth, photosynthesis, antioxidant enzyme activity, and yield of winter oilseed rape at the podding stage following waterlogging stress. The results showed that mixed spraying of SA and ABA significantly improved plant height, effective branching number, yield per plant, and thousand-grain weight of winter oilseed rape, surpassing the effects of individual treatments. Structural equation modeling revealed that mixed spraying enhanced yield components through direct improvements in photosynthesis and indirect regulation of antioxidant enzyme activities. This study is the first to systematically evaluate the role of mixed spraying of SA and ABA in mitigating waterlogging stress and restoring yield and quality in winter oilseed rape. This approach effectively alleviates the adverse effects of waterlogging and provides a valuable reference for post-waterlogging management of other crops. These results hold significant implications for addressing the impacts of climate change and ensuring global food security. Full article

The advancement of hybrid japonica rice is pivotal for securing japonica rice supplies and bolstering food security. To address prevalent issues such as inconsistent yields, subpar rice quality, and inadequate seed production in existing cultivars, Shenyou R3 was developed using advanced high-density rice gene chip technology, which is characterized by the expression of specific genes. This late-season, premium aromatic variety, characterized by a popcorn-like aroma, was bred by the Crop Breeding and Cultivation Research Institute of the Shanghai Academy of Agricultural Sciences. Shenyou R3 incorporates superior genes such as badh2-E7, Pi2, Xa21, Sdt97, and Hd17, among which, badh2-E7 and Hd17 are inherited from the maternal line, while Pi2, Xa21, and Sdt97 are inherited from both the maternal and paternal lines. Shenyou R3 offers high-quality rice that adheres to national premium grade 2 standards, with level 1 resistance to blast disease, and yields surpassing the control variety Huayou 14 by over 5% in 2022 Shanghai trials. The new hybrid japonica rice Shenyou R3 has high yield potential and nitrogen utilization efficiency. This paper elaborates on the molecular marker-assisted selection process, key traits, quality metrics, and yield performance of Shenyou R3, while also outlining essential cultivation practices. Full article

This study investigates the innovative use of natural porous clays from the Bejaad Region in Morocco as a support matrix for the encapsulation and controlled release of lemon essential oil (Citrus limonum, EOCL), a natural compound with well-documented insecticidal properties. The research aims to address the inherent challenges of essential oils, particularly their high volatility and rapid degradation, by improving their stability and insecticidal efficiency against the grain pest Sitophilus granarius. By anchoring EOCL onto clay matrices, this study seeks to achieve a sustained and controlled release of the active components, thereby enhancing their practical application as biopesticides. The clays were comprehensively characterized using advanced analytical techniques, including X-ray diffraction (XRD), X-ray fluorescence (XRF), Fourier-transform infrared spectroscopy (FT-IR), scanning electron microscopy with energy-dispersive X-ray analysis (SEM-EDX), and thermogravimetric analysis (TGA). These techniques revealed the mineralogical composition, thermal properties, and morphology of the clays, demonstrating their suitability for effectively adsorbing and retaining EOCL. The insecticidal performance of the clay/EOCL composites was thoroughly tested under controlled conditions, revealing a marked improvement in efficacy, with significantly lower lethal doses required to achieve high mortality rates in Sitophilus granarius. The diffusion of EOCL through the clay matrix was modeled using Fick’s law of diffusion, and the results were further refined through statistical optimization to identify key parameters that influence the release and effectiveness of the active compounds. Complementing the experimental approach, a bioinformatics analysis was conducted to explore the molecular interactions between limonene, the primary active component of EOCL, and target proteins in insects. This theoretical investigation provided insights into the potential mechanisms of action, reinforcing the empirical findings. This study concludes that encapsulating EOCL within porous clay matrices not only enhances the stability and controlled release of the oil but also significantly boosts its insecticidal effectiveness. This approach presents a promising, environmentally sustainable strategy for crop protection, integrating material science, theoretical modeling, and bioinformatics to develop more efficient and durable biopesticides. Full article

Rapeseed (Brassica napus L.) is one of the four major oilseed crops in the world and is rich in fatty acids. Changes in the fatty acid composition affect the quality of rapeseed. Fatty acids play various roles in plants, but the functions of the genes involved in the fatty acid composition during plant development remain unclear. β-Ketoacyl-CoA synthase (KCS) is a key enzyme involved in the elongation of fatty acids. Various types of fatty acid products are used to build lipid molecules, such as oils, suberin, wax, and membrane lipids. In B. napus, BnaKCSA8 and BnaKCSC3 belong to the KCS family, but their specific functions remain unclear. This study cloned BnaKCSA8 and BnaKCSC3 from Brassica napus L. and analyzed their functions. The gene structures of BnaKCSA8 and BnaKCSC3 were similar and they were localized to the endoplasmic reticulum (ER). In yeast, overexpression of BnaKCSA8 increased the ratios of palmitoleic acid and oleic acid, while BnaKCSC3 decreased the ratios of oleic acid. In Arabidopsis, overexpression of BnaKCSA8 and BnaKCSC3 lead to an increase in the proportion of linoleic acid and a decrease in the erucic acid. In summary, BnaKCSA8 and BnaKCSC3 altered the composition ratios of fatty acids. These findings lay the foundation for an understanding of the role of KCS in the fatty acids in rapeseed, potentially improving its health and nutritional qualities. Full article