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Keywords = Zanthoxylum species

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16 pages, 3852 KiB  
Article
A Natural Alkaloid, 6-Hydroxymethyldihydronitidine, Suppresses Tumor Progression by Co-Regulating Apoptosis, Ferroptosis, and FAK Pathways
by Haojing Jiang, Jiantong Hou, Jianliang Wang, Jing Xu and Yuanqiang Guo
Biomolecules 2025, 15(6), 814; https://doi.org/10.3390/biom15060814 - 4 Jun 2025
Viewed by 617
Abstract
Cancer treatment remains a formidable challenge globally. Natural products, particularly natural alkaloids, have emerged as significant resources for the development of novel anti-tumor drugs due to their structural diversity and unique biological activities. Our team previously isolated an alkaloid, 6-hydroxymethyldihydrochelerythrine (6-HMDN), from Zanthoxylum [...] Read more.
Cancer treatment remains a formidable challenge globally. Natural products, particularly natural alkaloids, have emerged as significant resources for the development of novel anti-tumor drugs due to their structural diversity and unique biological activities. Our team previously isolated an alkaloid, 6-hydroxymethyldihydrochelerythrine (6-HMDN), from Zanthoxylum ailanthoides. Subsequent in vitro and in vivo activity screenings, utilizing cell-based assays and a zebrafish xenograft model, revealed that 6-HMDN significantly inhibited the proliferation of HepG2 and MCF7 cells and effectively suppressed HepG2 cell migration. Mechanistic studies indicated that 6-HMDN induced tumor cell apoptosis by modulating the Bcl-2/Bax protein balance and activating the caspase cascade. Furthermore, 6-HMDN augmented intracellular reactive oxygen species (ROS) levels, thereby promoting ferroptosis, as evidenced by lipid ROS accumulation and glutathione (GSH) depletion. Additionally, 6-HMDN attenuated focal adhesion kinase (FAK) phosphorylation, leading to the inhibition of tumor cell migration. In vivo experiments further substantiated the capacity of 6-HMDN to effectively suppress tumor proliferation and metastasis. These findings demonstrate that 6-HMDN exhibits potent anti-tumor activity, exerting its effects through multiple mechanisms involving the regulation of apoptosis, ferroptosis, and the FAK signaling pathway. Therefore, 6-HMDN may be considered a promising candidate for anti-tumor drug development. Full article
(This article belongs to the Section Natural and Bio-derived Molecules)
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21 pages, 20072 KiB  
Article
Tree and Liana Growth in Three Neotropical Dry Forests: Coherent Patterns and Individualistic Responses to Climate Variability
by J. Julio Camarero and Cristina Valeriano
Forests 2025, 16(3), 542; https://doi.org/10.3390/f16030542 - 19 Mar 2025
Viewed by 403
Abstract
Tropical dry forests (TDFs) are among the ecosystems most threatened by agricultural use and climate warming. However, the long-term growth responses to climate variability of woody plants in TDFs are understudied because not all TDF species form conspicuous annual rings. To address this [...] Read more.
Tropical dry forests (TDFs) are among the ecosystems most threatened by agricultural use and climate warming. However, the long-term growth responses to climate variability of woody plants in TDFs are understudied because not all TDF species form conspicuous annual rings. To address this issue, we sampled trees (26 species) and lianas (2 species) in TDFs subjected to contrasting climate conditions and located in Colombia, Ecuador, and Bolivia. First, we examined the potential to form conspicuous tree-ring boundaries in 22 tree species (Amyris pinnata, Aspidosperma tomentosum, Beilschmiedia sp., Bursera graveolens, Caesalpinia pluviosa, Ceiba pentandra, Centrolobium microchaete, Citharexylum kunthianum, Cordia alliodora, Croton gossypiifolius, Cupania cinerea, Eugenia sp., Genipa americana, Guarea guidonia, Hymenaea courbaril, Machaerium capote, Pithecellobium dulce, Rapanea guianensis, Sapindus saponaria, Senna spectabilis, Zanthoxylum monophyllum, Zanthoxylum rhoifolium, and Zanthoxylum verrucosum) and two liana species (Bignoniaceae and Combretaceae families). Second, we built mean series of ring-width indices in selected tree (A. tomentosum, B. graveolens, C. alliodora, C. cinerea, C. microchaete, P. dulce, S. spectabilis, and Z. verrucosum) and liana species and related them to climate variables. Wet conditions during the current and prior growing seasons enhanced growth in tree and liana species in different TDFs. Coexisting species showed individualistic responses to climate variability. Full article
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19 pages, 5720 KiB  
Article
Short-Term Effects of Three Tree Species on Soil Physicochemical Properties and Microbial Communities During Land-Use Change from Farmland to Forests
by Yi Jian, Jing Lin, Changlong Mu, Yuqi Wang, Zhenyang He, Gang Chen and Wei Ding
Forests 2025, 16(2), 362; https://doi.org/10.3390/f16020362 - 17 Feb 2025
Cited by 2 | Viewed by 622
Abstract
In recent decades, much of China’s farmland has been transformed into forests due to the Conversion of Farmland to Forests and Grasses Project. While past research has mainly examined soil nutrients and water conservation, less attention has been given to soil microbial communities. [...] Read more.
In recent decades, much of China’s farmland has been transformed into forests due to the Conversion of Farmland to Forests and Grasses Project. While past research has mainly examined soil nutrients and water conservation, less attention has been given to soil microbial communities. This study examined the effects of converting farmland to forests of Pleioblastus amarus (PA), Populus deltoides (PD), or Zanthoxylum bungeanum (ZB) on the soil physiochemical properties, enzymes, and microbial communities, using abandoned land (AL) as the control, over a period of five years. The results showed that PA increased the soil organic carbon (SOC) content, although not significantly, while significantly boosting the C:N and C:P ratios and urease activity compared to the AL. PD notably reduced the amylase and cellulase activities, as well as the fungal Shannon index. Additionally, the beta diversity of both the bacterial and fungal communities in the PA stand was clearly distinct from that of the AL and the other tree species. The SOC content, total potassium content, and cellulase activity showed significant correlations with bacterial communities. Moreover, the bacterial community changes in the PD and ZB stands were mainly driven by the genera Steroidobacter, Roseisolibacter, and Serendipita, and were negatively correlated with the SOC content, C:N and C:P ratios, and cellulase activity. In contrast, the fungal community changes in the PA stand were primarily influenced by the order Capnodiales, family Capnodiaceae, genus Chaetocapnodium, and species Chaetocapnodium philippinense, which were positively correlated with the soil pH, C:N and C:P ratios, and cellulase activity. Furthermore, “Metabolism” was identified as the primary bacterial function, and converting farmland to forest altered the fungal nutritional type from Saprotroph to Pathotroph–Saprotroph–Symbiotroph, particularly in the PA stand. These findings indicate that converting farmland to forest, particularly with bamboo P. amarus, significantly impacts the bacterial and fungal communities in the soil and changes the fungal trophic type due to the carbon source and cellulase activity of this tree species. Full article
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19 pages, 10380 KiB  
Article
Identification and Characterization of SQUAMOSA Promoter Binding Protein-like Transcription Factor Family Members in Zanthoxylum bungeanum and Their Expression Profiles in Response to Abiotic Stresses
by Shengshu Wang, Weiming Hu, Xueli Zhang, Yulin Liu and Fen Liu
Plants 2025, 14(4), 520; https://doi.org/10.3390/plants14040520 - 8 Feb 2025
Viewed by 747
Abstract
Plant-specific transcription factors known as SQUAMOSA promoter binding protein-like (SPL) genes are essential for development, growth, and abiotic stress responses. While the SPL gene family has been extensively studied in various plant species, a systematic characterization in Zanthoxylum bungeanum (Zb [...] Read more.
Plant-specific transcription factors known as SQUAMOSA promoter binding protein-like (SPL) genes are essential for development, growth, and abiotic stress responses. While the SPL gene family has been extensively studied in various plant species, a systematic characterization in Zanthoxylum bungeanum (Zb) is lacking. This study used transcriptomic and bioinformatics data to conduct a thorough genomic identification and expression investigation of the ZbSPL gene family. Eight subfamilies including 73 ZbSPL members were identified, most of which are predicted to be localized in the nucleus. Ka/Ks ratio analysis indicates that most ZbSPL genes have undergone purifying selection. According to evolutionary research, segmental duplication is a major factor in the amplification of the ZbSPL gene family. Gene structures, conserved motifs, and domains were found to be highly conserved among paralogs. Cis-element research revealed that ZbSPLs may be implicated in hormone and abiotic stress responses. Codon usage pattern analysis showed that the ZbSPL gene family was more inclined to A/T base endings; the higher the A/T content, the stronger the preference of the codons; and the use pattern was mainly affected by natural selection. Additionally, 36 ZbSPLs were found to be potential targets of miR156. RNA-seq demonstrated that SPL genes in Zb are differentially expressed in response to distinct abiotic stressors. Two ZbSPL genes (ZbSPL10 and ZbSPL17) were implicated in the response to salt stress, while four ZbSPL genes (ZbSPL06, ZbSPL43, ZbSPL60, and ZbSPL61) showed response to drought stress, based on a qRT-PCR investigation of the ZbSPL genes under various abiotic stress conditions. This study will help us gain a deeper understanding of the functions of ZbSPLs and lay a genetic foundation for future breeding of high-quality, highly abiotic resistant varieties of Z. bungeanum. Full article
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20 pages, 11429 KiB  
Article
Genome-Wide Analysis of C2H2 Zinc Finger Gene Family and Exploration of Genes Related to Prickle Development in Zanthoxylum armatum
by Nuo Wang, Renhua Huang, Hualin Zou, Yuwei Yi, Jiabao Ye, Weiwei Zhang, Feng Xu and Yongling Liao
Horticulturae 2024, 10(12), 1371; https://doi.org/10.3390/horticulturae10121371 - 20 Dec 2024
Viewed by 1102
Abstract
Zanthoxylum armatum (Z. armatum) is a significant economic tree species known for its medicinal and edible properties. However, the presence of prickles on Z. armatum poses a considerable challenge to the advancement of its industry. Numerous studies have indicated that the [...] Read more.
Zanthoxylum armatum (Z. armatum) is a significant economic tree species known for its medicinal and edible properties. However, the presence of prickles on Z. armatum poses a considerable challenge to the advancement of its industry. Numerous studies have indicated that the C2H2 zinc finger protein (C2H2-ZFPs) families are crucial in the development of plant trichomes or prickles. This study identified 78 ZaC2H2 genes from the Z. armatum genome, categorizing them into three groups and analyzing their protein physicochemical properties, chromosomal locations, conserved domains, and gene structures. The evolutionary analysis indicates that the amplification of ZaC2H2 genes primarily results from whole-genome duplication or segmental duplication, and these genes have undergone strong purifying selection pressure throughout their evolutionary history. The analysis of cis-acting elements revealed that they contain various hormone response elements, such as ABRE, AuxRR, the CGTCA motif, GARE motifs, and TCA elements, which are responsive to ABA, IAA, MeJA, GA, and SA signals. RT-qPCR was employed to assess the expression levels of the candidate genes ZaC2H2-45, ZaC2H2-46, ZaC2H2-49, and ZaC2H2-55 under the treatment of five hormones. The results indicated that the expression levels of the ZaC2H2-46 and ZaC2H2-55 genes were significantly up-regulated under NAA, SA, and MeJA treatments. These results will help to further understand the characteristics of the ZaC2H2 gene family and provide a theoretical basis for studying the development of prickles. Full article
(This article belongs to the Section Genetics, Genomics, Breeding, and Biotechnology (G2B2))
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19 pages, 3282 KiB  
Review
Alkamides in Zanthoxylum Species: Phytochemical Profiles and Local Anesthetic Activities
by I-Cheng Lu, Pin-Yang Hu, Chia-Heng Lin, Lin-Li Chang, Hung-Chen Wang, Kuang-I Cheng, Tz-Ping Gau and Kai-Wei Lin
Int. J. Mol. Sci. 2024, 25(22), 12228; https://doi.org/10.3390/ijms252212228 - 14 Nov 2024
Cited by 1 | Viewed by 1413
Abstract
Zanthoxylum species have long been utilized in traditional medicine; among their various properties, they provide an analgesic effect. Central to this medicinal application are alkamides, a class of alkaloids characterized by their unsaturated fatty acid chains. These compounds are particularly noted for their [...] Read more.
Zanthoxylum species have long been utilized in traditional medicine; among their various properties, they provide an analgesic effect. Central to this medicinal application are alkamides, a class of alkaloids characterized by their unsaturated fatty acid chains. These compounds are particularly noted for their distinctive alleviation of tingling and numbing effects, which are beneficial in dental pain management and local anesthesia. This review synthesizes the existing phytochemical research on alkamides derived from 11 Z. species, focusing on their chemical properties, pharmacodynamics and clinical implications. The analysis includes an examination of the structure–activity relationships (SARs), pharmacokinetics and mechanisms by which these compounds modulate sensations such as pungency and numbness, contributing to their analgesic and local anesthetic efficacy. This systemic review identifies significant research gaps, including the need for comprehensive evaluations of alkamide efficacy, detailed explorations of their pharmacological mechanisms and expanded clinical applications. These areas represent key opportunities for future investigations to enhance the understanding and utilization of alkamides in medical treatments. Full article
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40 pages, 2668 KiB  
Article
Ethnomedicinal Plants and Herbal Preparations Used by Rural Communities in Tehsil Hajira (Poonch District of Azad Kashmir, Pakistan)
by Tahira Jabeen, Muhammad Shoaib Amjad, Khalid Ahmad, Rainer W. Bussmann, Huma Qureshi and Ivana Vitasović-Kosić
Plants 2024, 13(10), 1379; https://doi.org/10.3390/plants13101379 - 15 May 2024
Cited by 1 | Viewed by 2579
Abstract
The present study emphasizes the importance of documenting ethnomedicinal plants and herbal practices of the local rural communities of Tehsil Hajira (Pakistan). The aim was to document, explore and quantify the traditional ethnomedicinal knowledge. Ethnobotanical data were collected using semi-structured questionnaires and analyzed [...] Read more.
The present study emphasizes the importance of documenting ethnomedicinal plants and herbal practices of the local rural communities of Tehsil Hajira (Pakistan). The aim was to document, explore and quantify the traditional ethnomedicinal knowledge. Ethnobotanical data were collected using semi-structured questionnaires and analyzed using various quantitative indices. The results showed that 144 medicinal plant species from 70 families and 128 genera play an important role in herbal preparations. The most common type of preparation was powder (19.0%), followed by paste (16.7%), aqueous extract (15.7%), decoction (14.7%) and juice (11.0%). Fragaria nubicola (0.94) and Viola canescens (0.93) had the highest relative frequency of mention (RFC), while Berberis lycium (1.22) and Fragaria nubicola (1.18) had the highest use value (UV). Geranium wallichianum (85.5), Ligustrum lucidum (83) and Indigofera heterantha (71.5) were the most important species in the study area with the highest relative importance (RI) value. The diseases treated were categorized into 17 classes, with diseases of the digestive system and liver having the highest Informant Consensus Factor (ICF) value, followed by diseases of the oropharynx and musculoskeletal system. Important plants mentioned for the treatment of various diseases of the gastrointestinal tract are Zanthoxylum alatum, Berberis lycium, Mentha longifolia, Punica granatum, Rubus ellipticus and Viola canescens. New applications of rarely documented plants from this area are: Oxalis corniculata paste of the whole plant to treat vitiligo, Carthamus tinctorius flowers to treat chicken pox, Dioscorea deltoidea tuber powder to treat productive cough, Inula cappa root decoction to treat miscarriage, Habenaria digitata tuber juice for the treatment of fever, Viola canescens leaves and flowers for the treatment of sore throat and Achillea millefolium root and leaf juice for the treatment of pneumonia. These plants may contain interesting biochemical compounds and should be subjected to further pharmacological studies to develop new drugs. Traditional medicinal knowledge in the area under study is mainly limited to the elderly, traditional healers and midwives. Therefore, resource conservation strategies and future pharmacological studies are strongly recommended. Full article
(This article belongs to the Section Plant Systematics, Taxonomy, Nomenclature and Classification)
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12 pages, 2431 KiB  
Article
Chemical Composition Variation in Essential Oil and Their Correlation with Climate Factors in Chinese Prickly Ash Peels (Zanthoxylum armatum DC.) from Different Habitats
by Qianqian Qian, Zhihang Zhuo, Yaqin Peng and Danping Xu
Molecules 2024, 29(6), 1343; https://doi.org/10.3390/molecules29061343 - 18 Mar 2024
Cited by 8 | Viewed by 2128
Abstract
Essential oils are secondary metabolites in plants with a variety of biological activities. The flavor and quality of Zanthoxylum armatum DC. are mainly determined by the essential oil components in the Chinese prickly ash peels. In this study, the correlation between climate change [...] Read more.
Essential oils are secondary metabolites in plants with a variety of biological activities. The flavor and quality of Zanthoxylum armatum DC. are mainly determined by the essential oil components in the Chinese prickly ash peels. In this study, the correlation between climate change in different regions and the content of essential oils of Z. armatum was investigated using gas chromatography–mass spectrometry (GC/MS) and multivariate statistical analysis. The Z1–24 refers to 24 batches of samples from different habitats. A total of 145 essential oils were detected in 24 batches of samples, with the highest number of terpene species and the highest content of alcohol. The relative odor activity (ROAV) values identified nine main flavor compounds affecting the odor of Z. armatum. Linalool, decanal, and d-limonene were the most critical main flavor compounds, giving Z. armatum a spicy, floral, oily, and fruity odor. The results of hierarchical cluster analysis (HCA) and principal component analysis (PCA) classified Z5 into a separate group, Z2 and Z7 were clustered into one group, and the rest of the samples were classified into another group. Correlation analysis and path analysis showed that temperature and precipitation were the main climatic factors affecting essential oils. Comparisons can be made with other plants in the genus Zanthoxylum to analyze differences in essential oil type and content. This study contributes to the identification of Z. armatum quality, promotes the accumulation of theories on the effects of climatic factors on essential oils, and enriches the site selection and breeding of Z. armatum under similar climatic conditions. Full article
(This article belongs to the Special Issue Detection of Volatile Compounds in Foods)
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13 pages, 2589 KiB  
Article
In Vitro Metabolism and In Vivo Pharmacokinetics Profiles of Hydroxy-α-Sanshool
by Jie Meng, Die Qian, Ruo-Lan Li, Wei Peng and Li Ai
Toxics 2024, 12(2), 100; https://doi.org/10.3390/toxics12020100 - 24 Jan 2024
Cited by 1 | Viewed by 2962
Abstract
Hydroxy-α-sanshool (HAS) is the predominant active compound in Zanthoxylum bungeanum Maxim (ZBM). Our present work was aimed to explore the in vitro metabolism characteristics, and in vivo pharmacokinetic (PK) profile of HAS. Plasma (human), liver microsomes, and hepatocytes (human, monkey, dog, mouse, and [...] Read more.
Hydroxy-α-sanshool (HAS) is the predominant active compound in Zanthoxylum bungeanum Maxim (ZBM). Our present work was aimed to explore the in vitro metabolism characteristics, and in vivo pharmacokinetic (PK) profile of HAS. Plasma (human), liver microsomes, and hepatocytes (human, monkey, dog, mouse, and rat) were collected for HAS metabolism studies in vitro and HAS elimination rates in liver microsomes and hepatocytes of different species were investigated. In addition, five recombinant human CYP enzymes were used to identify CYP isoforms of HAS. Finally, the PK properties of HAS in rats in vivo were studied by oral administration (p.o.). The results showed that HAS stably metabolized in human and rat liver microsomes and human hepatocytes, and the binding of HAS to human plasma proteins was nonspecific; HAS has strong inhibitory effects on CYP2C9 and CYP2D6 of human liver microsomes. In addition, in vivo PK study, HAS is rapidly absorbed in rats after oral administration. In conclusion, the in vivo and in vitro metabolic studies of HAS in this study provide data support for its further development and application, and the metabolic profiles of different species can be used as a reference for its safety evaluation. Full article
(This article belongs to the Section Drugs Toxicity)
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14 pages, 2395 KiB  
Article
Six Express Sequence Tag–Simple Sequence Repeat Primers Reveal Genetic Diversity in the Cultivars of Three Zanthoxylum Species
by Yangchuan Deng, Zhoujian He, Yanlin Li, Meng Ye and Li Xiang
Curr. Issues Mol. Biol. 2023, 45(9), 7183-7196; https://doi.org/10.3390/cimb45090454 - 30 Aug 2023
Cited by 1 | Viewed by 1722
Abstract
Zanthoxylum (Sichuan pepper), with its rich cultivars, has long been widely cultivated in China for its unique seasoning and medicinal uses, but most of its cultivars have similar morphological characteristics. Therefore, we hypothesized that the genetic diversity of Zanthoxylum cultivars is low because [...] Read more.
Zanthoxylum (Sichuan pepper), with its rich cultivars, has long been widely cultivated in China for its unique seasoning and medicinal uses, but most of its cultivars have similar morphological characteristics. Therefore, we hypothesized that the genetic diversity of Zanthoxylum cultivars is low because of their apomixis and long cultivation history. In this study, we aimed to investigate the genetic diversity of three Zanthoxylum species on the cultivar level based on express sequence tag–simple sequence repeat (EST-SSR) primers. In total, 121 samples of three Zanthoxylum species (Z. bungeanum, Z. armatum and Z. piperitum) were collected from different areas in China for genetic diversity analysis. A total of six specificity and polymorphism EST-SSR primers, which we selected from among 120 primers based on two transcriptomes (Z. bungeanum, Z. armatum) in our earlier study, were used to evaluate genetic diversity based on capillary electrophoresis technology. The results of our analysis using the unweighted pair group method with arithmetic mean (UPGMA) indicated that most of the samples are clustered in one clade in the UPGMA dendrogram, and the average genetic distance was 0.6409. Principal component analysis (PCA) showed that Z. piperitum may have a closer genetic relationship with Z. bungeanum than with Z. armatum. An analysis of molecular variation (AMOVA) showed that the genetic variation mainly stemmed from individuals within populations; the genetic differentiation coefficient (PhiPT) was 0.429, the gene flow (Nm) between populations was 0.333, and the differences among populations were not significant (p > 0.001). For the intraspecific populations of ZB, the percentage of genetic variation was 53% among populations and 47% within populations, with non-significant differences between populations (p > 0.001). The genetic differentiation coefficient (PhiT) was 0.529, and the gene flow (Nm) was 0.223. For the intraspecific populations of ZA, the results indicated that the percentage of genetic variation was 29% among populations and 71% within populations, with non-significant differences between populations (p > 0.001); the genetic differentiation coefficient (PhiPT) was 0.293, and the gene flow (Nm) was 0.223. Through genetic structure analysis (GSA), we predicted that these 121 samples belonged to two optimal subgroups, which means that all the samples probably originated from two gene pools. Above all, this indicated that the genetic diversity of the 121 Zanthoxylum samples was relatively low at both the species and cultivar levels, a finding which was consistent with our initial assumptions. This study provides a reference, with molecular-level data, for the further identification of Zanthoxylum species. Full article
(This article belongs to the Section Molecular Plant Sciences)
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11 pages, 1355 KiB  
Article
GC/MS Profile and Antifungal Activity of Zanthoxylum caribaeum Lam Essential Oil against Moniliophthora roreri Cif and Par, a Pathogen That Infects Theobroma cacao L Crops in the Tropics
by Marcial Fuentes-Estrada, Andrea Jiménez-González, Diannefair Duarte, Rogerio Saavedra-Barrera, Carlos Areche, Elena Stashenko, Nayive Pino Benítez, Daniela Bárcenas-Pérez, José Cheel and Olimpo García-Beltrán
Chemosensors 2023, 11(8), 447; https://doi.org/10.3390/chemosensors11080447 - 10 Aug 2023
Cited by 1 | Viewed by 2271
Abstract
The species Zanthoxylum caribaeum belongs to the Rutaceae family, from which several chemical nuclei are known, including alkaloids and coumarins. In addition, its essential oil has been characterized, showing differences in composition and various antimicrobial activities. In the present study, the essential oil [...] Read more.
The species Zanthoxylum caribaeum belongs to the Rutaceae family, from which several chemical nuclei are known, including alkaloids and coumarins. In addition, its essential oil has been characterized, showing differences in composition and various antimicrobial activities. In the present study, the essential oil of Z. caribaeum collected in the department of Tolima, central Colombia, was characterized by gas chromatography with mass selective detector (GC-MS). The essential oil showed a composition of about 43 compounds (including major and minor), whose main components, according to their abundance, are the following: germacrene D (228.0 ± 1.6 mg/g EO), (E)-β-farnesene (128.0 ± 1.5 mg/g EO), β-elemene (116.0 ± 1.6 mg/g EO) and (E)-nerolidol (74.0 ± 2.2 mg/g EO). This oil was tested against microorganisms that affect cocoa production in Colombia and in tropical countries where the production of this commodity is very important for the economy. The antifungal tests were performed on the fungal species Moniliophthora roreri and showed promising and significant activity, inhibiting growth by more than 95% at concentrations of 50 µL/mL and 100 µL/mL. This remarkable antifungal activity could be due to the presence of major and minor compounds that synergistically enhance the activity. Full article
(This article belongs to the Special Issue GC, MS and GC-MS Analytical Methods: Opportunities and Challenges)
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15 pages, 3105 KiB  
Article
Karyotype and Phylogenetic Relationship Analysis of Five Varieties and Cultivars of Zanthoxylum armatum Based on Oligo-FISH
by Zhoujian He, Yuting Lei, Wei Gong, Meng Ye and Xiaomei Luo
Genes 2023, 14(7), 1459; https://doi.org/10.3390/genes14071459 - 17 Jul 2023
Cited by 5 | Viewed by 1997
Abstract
Green prickly ash (Zanthoxylum armatum) has edible and medicinal value and is an economically significant plant in many countries. Z. armatum has many cultivars and varieties with similar phenotypes that are difficult to distinguish via traditional methods. In this study, we [...] Read more.
Green prickly ash (Zanthoxylum armatum) has edible and medicinal value and is an economically significant plant in many countries. Z. armatum has many cultivars and varieties with similar phenotypes that are difficult to distinguish via traditional methods. In this study, we utilized oligo-FISH to distinguish five varieties and cultivars of Z. armatum on the basis of three oligonucleotide probes of 5S rDNA, (AG3T3)3, and (GAA)6. Karyotype analysis of the five varieties and cultivars of Z. armatum showed that the Z. armatum ‘Tengjiao’ karyotype formula was 2n = 2x = 98m with karyotype type 1C and an arm ratio of 4.3237, including two pairs of 5S rDNA signals and five pairs of (GAA)6 signals. The karyotype formula of Z. armatum ‘Youkangtengjiao’ was 2n = 2x = 128m + 8sm with karyotype type 2B and an arm ratio of 3.5336, including three pairs of 5S rDNA signals and 17 pairs of (GAA)6 signals. The karyotype formula of Z. armatum var. novemfolius was 2n = 2x = 134m + 2sm with karyotype type 1C and an arm ratio of 5.5224, including two pairs of 5S rDNA signals and eight pairs of (GAA)6 signals. The karyotype formula of Z. armatum ‘YT-03’ was 2n = 2x = 2M + 128m + 4sm + 2st with karyotype type 2C and an arm ratio of 4.1829, including three pairs of 5S rDNA signals and nine pairs of (GAA)6 signals. The karyotype formula of Z. armatum ‘YT-06’ was 2n = 2x = 126m + 10sm with cytotype 2B and an arm ratio of 3.3011, including three pairs of 5S rDNA signals and two pairs of (GAA)6 signals. The five varieties and cultivars of Z. armatum had (AG3T3)3 signals on all chromosomes. The chromosomal symmetry of Z. armatum ‘Tengjiao’ was high, whereas the chromosomal symmetry of Z. armatum 'YT-03' was low, with the karyotypes of the five materials showing a trend toward polyploid evolution. The phylogenetic relationship between Z. armatum ‘Tengjiao’ and Z. armatum var. novemfolius was the closest, while that between Z. armatum ‘YT-03’ and Z. armatum ‘YT-06’ was closer than with Z. armatum ‘Youkangtengjiao’ according to oligo-FISH. The results provided a karyotype profile and a physical map that contributes to the distinction of varieties and cultivars of Z. armatum and provides strategies for distinguishing other cultivated species. Full article
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18 pages, 2469 KiB  
Article
Cytotoxicity and Genotoxicity Evaluation of Zanthoxylum rhoifolium Lam and In Silico Studies of Its Alkaloids
by Rufine Azonsivo, Kelly Cristina Oliveira de Albuquerque, Ana Laura Gadelha Castro, Juliana Correa-Barbosa, Helena Joseane Raiol de Souza, Andryo Orfi de Almada-Vilhena, Gleison Gonçalves Ferreira, Anderson Albuquerque de Souza, Andrey Moacir do Rosario Marinho, Sandro Percario, Cleusa Yoshiko Nagamachi, Julio Cesar Pieczarka and Maria Fâni Dolabela
Molecules 2023, 28(14), 5336; https://doi.org/10.3390/molecules28145336 - 11 Jul 2023
Cited by 1 | Viewed by 1945
Abstract
The alkaloids isolated from Zanthoxylum rhoifolium have demonstrated great pharmacological potential; however, the toxic profiles of these extracts and fractions are still not well elucidated. This study evaluated the toxicity of the ethanol extract (EEZR) and neutral (FNZR) and alkaloid (FAZR) fractions. Chemical [...] Read more.
The alkaloids isolated from Zanthoxylum rhoifolium have demonstrated great pharmacological potential; however, the toxic profiles of these extracts and fractions are still not well elucidated. This study evaluated the toxicity of the ethanol extract (EEZR) and neutral (FNZR) and alkaloid (FAZR) fractions. Chemical characterization was performed by chromatographic methods: thin-layer chromatography (TLC) and high-performance liquid chromatography coupled with diode array detection (HPLC–DAD). The cytotoxicity of the samples was evaluated in human hepatocellular carcinoma (HepG2) cells using the cell viability method (MTT) and mutagenicity by the Allium cepa assay (ACA). Alkaloids isolated from the species were selected for toxicity prediction using preADMET and PROTOX. The molecular docking of the topoisomerase II protein (TOPOII) was used to investigate the mechanism of cell damage. In the EEZR, FNZR, and FAZR, the presence of alkaloids was detected in TCL and HPLC–DAD analyses. These samples showed a 50% inhibitory concentration (IC50) greater than 400 μg/mL in HepG2 cells. In ACA, time- and concentration-dependent changes were observed, with a significant reduction in the mitotic index and an increase in chromosomal aberrations for all samples. Nuclear sprouts and a micronucleus of the positive control (PC) were observed at 10 µg/mL and in the FAZR at 30 µg/mL; a chromosomal bridge in FNZR was observed at 105 µg/mL, CP at a concentration of 40 µg/mL, and nuclear bud and mitotic abnormalities in the EEZR were observed at 170 µg/mL. The alkaloids with a benzophenanthridine were selected for the in silico study, as structural alterations demonstrated certain toxic effects. Molecular docking with topo II demonstrated that all alkaloids bind to the protein. In summary, the fractionation of Z. rhoifolium did not interfere with toxicity; it seems that alkaloids with a benzophenanthridine nucleus may be involved in this toxicity. Full article
(This article belongs to the Section Natural Products Chemistry)
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15 pages, 4511 KiB  
Article
Forest Ecosystem Service Trade-Offs/Synergies and System Function Optimization in Karst Desertification Control
by Kangning Xiong, Xuehua Deng, Shihao Zhang, Yu Zhang and Lingwei Kong
Plants 2023, 12(12), 2376; https://doi.org/10.3390/plants12122376 - 19 Jun 2023
Cited by 11 | Viewed by 2166
Abstract
Karst desertification control forests are essential for ecosystem multi functionality, but the trade-offs/synergies are unclear for forest ecosystem services. In order to clarify the trade-offs/synergies, this study was conducted on eight forest communities in a karst desertification control area and was based on [...] Read more.
Karst desertification control forests are essential for ecosystem multi functionality, but the trade-offs/synergies are unclear for forest ecosystem services. In order to clarify the trade-offs/synergies, this study was conducted on eight forest communities in a karst desertification control area and was based on vegetation surveys and structural and functional monitoring. It analyzes water holding capacity, species diversity, soil conservation, and carbon storage characteristics and their trade-off/synergies. The results indicate the following: (1) The Cladrastis platycarpa + Cotinus coggygria community (H1) had the highest water holding capacity and species diversity with values of 252.21 t·hm−2 and 2.56, respectively. Soil conservation was highest in the Zanthoxylum bungeanum + Glycine max community (H6), with an index value of 1.56. Carbon storage was the greatest in the Tectona grandis community (H8), at 103.93 t·hm−2. The results of these studies have shown that there are significant differences in different types of forest community ecosystem services. (2) Water holding capacity, species diversity, soil conservation, and carbon storage, all have synergistic relationships, suggesting a trend towards synergistic enhancement between the services. (3) The species diversity of the forest ecosystems was shown to be in a trade-off with carbon storage and soil conservation, which suggests that the services are in competition with each other. To further improve the service capacity of forest ecosystems, the trade-offs between the regulation of forest community structure and function and the improvement of services should be optimized. Full article
(This article belongs to the Special Issue Soil-Plant-Water System and Interactions)
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20 pages, 5231 KiB  
Article
HS-SPME/GC×GC-TOFMS-Based Flavoromics and Antimicrobial Properties of the Aroma Components of Zanthoxylum motuoense
by Wei Gu, Yinghuan Wei, Xianjie Fu, Ronghui Gu, Junlei Chen, Junyou Jian, Liejun Huang, Chunmao Yuan, Wenling Guan and Xiaojiang Hao
Foods 2023, 12(11), 2225; https://doi.org/10.3390/foods12112225 - 31 May 2023
Cited by 14 | Viewed by 2342
Abstract
Zanthoxylum motuoense Huang, native to Tibet, China, is a newly discovered Chinese prickly ash, which, recently, has increasingly attracted the attention of researchers. In order to understand its volatile oil compositions and flavor characteristics, and to explore the flavor difference between Z. motuoense [...] Read more.
Zanthoxylum motuoense Huang, native to Tibet, China, is a newly discovered Chinese prickly ash, which, recently, has increasingly attracted the attention of researchers. In order to understand its volatile oil compositions and flavor characteristics, and to explore the flavor difference between Z. motuoense and the common Chinese prickly ash sold in the market, we analyzed the essential oils of Z. motuoense pericarp (MEO) using HS-SPME/GC×GC-TOFMS coupled with multivariate data and flavoromics analyses. The common commercial Chinese prickly ash in Asia, Zanthoxylum bungeanum (BEO), was used as a reference. A total of 212 aroma compounds from the 2 species were identified, among which alcohols, terpenoids, esters, aldehydes, and ketones were the major compounds. The predominant components detected from MEO were citronellal, (+)-citronellal, and β-phellandrene. Six components—citronellal, (E,Z)-3,6-nonadien-1-ol, allyl methallyl ether, isopulegol, 3,7-dimethyl-6-octen-1-ol acetate, and 3,7-dimethyl-(R)-6-octen-1-ol—could be used as the potential biomarkers of MEO. The flavoromics analysis showed that MEO and BEO were significantly different in aroma note types. Furthermore, the content differences of several numb taste components in two kinds of prickly ash were quantitatively analyzed using RP-HPLC. The antimicrobial activities of MEO and BEO against four bacterial strains and nine plant pathogenic fungi were determined in vitro. The results indicated that MEO had significantly higher inhibitory activities against most microbial strains than BEO. This study has revealed the fundamental data in respect of the volatile compound properties and antimicrobial activity of Z. motuoense, offering basic information on valuable natural sources that can be utilized in the condiment, perfume, and antimicrobial sectors. Full article
(This article belongs to the Section Food Analytical Methods)
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