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Keywords = Schmidt’s criteria

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25 pages, 4374 KiB  
Article
Identifying Genes Associated with the Anticancer Activity of a Fluorinated Chalcone in Triple-Negative Breast Cancer Cells Using Bioinformatics Tools
by Eduardo De la Cruz-Cano, José Ángel González-Díaz, Ivonne María Olivares-Corichi, Jorge Tonatiuh Ayala-Sumuano, José Alfredo Díaz-Gandarilla, Quirino Torres-Sauret, Violeta Larios-Serrato, Miguel Ángel Vilchis-Reyes, Carlos Javier López-Victorio, José Arnold González-Garrido and José Rubén García-Sánchez
Int. J. Mol. Sci. 2025, 26(8), 3662; https://doi.org/10.3390/ijms26083662 - 12 Apr 2025
Viewed by 1316
Abstract
Fluorinated chalcones are molecules reported to possess potent anticancer properties against triple-negative breast cancer (TNBC) cells. However, their molecular mechanisms have not yet been fully explored. Using bioinformatics tools, we analyzed the transcriptomes of MDA-MB-231 cells treated with either a novel fluorinated chalcone [...] Read more.
Fluorinated chalcones are molecules reported to possess potent anticancer properties against triple-negative breast cancer (TNBC) cells. However, their molecular mechanisms have not yet been fully explored. Using bioinformatics tools, we analyzed the transcriptomes of MDA-MB-231 cells treated with either a novel fluorinated chalcone (compound 3) or a control in order to identify differentially expressed (DE) genes associated with its anticancer activity and determine the biological processes in which these genes are involved. A fluorinated chalcone was synthesized using the Claisen–Schmidt method. The transcriptome of MDA-MB-231 cells was then analyzed on an Illumina NextSeq500, and DE genes with significant changes in expression were identified using the DESeq2 v1.38.0 bioinformatics tool under the strict detection criteria of |log2FC| ≥  2 and adjusted p < 0.05. We identified 504 DE genes, which were enriched in terms related to “regulation of cell death”, “cation transport”, “response to topologically incorrect proteins”, and “response to unfolded proteins”. Surprisingly, these genes were involved in “the HSF1-dependent transactivation pathway” and “the attenuation phase pathway”. This bioinformatics-based study suggests that the tested fluorinated chalcone could influence HSF-1 silencing in addition to promoting the up-regulation of several genes involved in stress-induced apoptosis. Therefore, the tested compound could have enormous potential as a novel approach for TNBC treatment. Full article
(This article belongs to the Special Issue Molecular Research in Triple-Negative Breast Cancer)
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26 pages, 3650 KiB  
Article
Geometrical Optics Stability Analysis of Rotating Visco-Diffusive Flows
by Oleg Kirillov
Mathematics 2025, 13(3), 382; https://doi.org/10.3390/math13030382 - 24 Jan 2025
Viewed by 1030
Abstract
Geometrical optics stability analysis has proven effective in deriving analytical instability criteria for 3D flows in ideal hydrodynamics and magnetohydrodynamics, encompassing both compressible and incompressible fluids. The method models perturbations as high-frequency wavelets, evolving along fluid trajectories. Detecting local instabilities reduces to solving [...] Read more.
Geometrical optics stability analysis has proven effective in deriving analytical instability criteria for 3D flows in ideal hydrodynamics and magnetohydrodynamics, encompassing both compressible and incompressible fluids. The method models perturbations as high-frequency wavelets, evolving along fluid trajectories. Detecting local instabilities reduces to solving ODEs for the wave vector and amplitude of the wavelet envelope along streamlines, with coefficients derived from the background flow. While viscosity and diffusivity were traditionally regarded as stabilizing factors, recent extensions of the geometrical optics framework have revealed their destabilizing potential in visco-diffusive and multi-diffusive flows. This review highlights these advancements, with a focus on their application to the azimuthal magnetorotational instability in magnetohydrodynamics and the McIntyre instability in lenticular vortices and swirling differentially heated flows. It introduces new analytical instability criteria, applicable across a wide range of Prandtl, Schmidt, and magnetic Prandtl numbers, which still remains beyond the reach of numerical methods in many important physical and industrial applications. Full article
(This article belongs to the Special Issue Numerical Simulation and Methods in Computational Fluid Dynamics)
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11 pages, 2570 KiB  
Article
Solid-State [2+2] Photoreaction of Isostructural Cd(II) Metal Complexes and Solid-State Fluorescence
by Akansha Ekka, Aditya Choudhury, Madhumita Samanta, Ayushi Deshmukh, Nathan R. Halcovitch, In-Hyeok Park and Raghavender Medishetty
Molecules 2024, 29(2), 351; https://doi.org/10.3390/molecules29020351 - 10 Jan 2024
Cited by 3 | Viewed by 1921
Abstract
A green method to synthesize cyclobutane derivatives has been developed over the past three decades in the form of solid-state [2+2] photochemical reactions. These solid-state reactions also play a major role in the structural transformation of hybrid materials. In this regard, crystal engineering [...] Read more.
A green method to synthesize cyclobutane derivatives has been developed over the past three decades in the form of solid-state [2+2] photochemical reactions. These solid-state reactions also play a major role in the structural transformation of hybrid materials. In this regard, crystal engineering has played a major role in designing photoreactive molecular systems. Here, we report three novel binuclear Cd(II) complexes with the molecular formula [Cd2(4spy)4L4], where 4spy = 4-styryl pyridine and L = p-toluate (1); 4-fluorobenzoate (2); and 3-fluorobenzoate (3). Although three different benzoates are used, all three complexes are isostructural, as corroborated through SCXRD experiments. Structural analysis also helped in identifying two potential photoreactions. These are both intra- and intermolecular in nature and are driven by the head-to-head (HH) and head-to-tail (HT) alignment of 4spy linkers within these metal complexes. 1H NMR spectroscopy studies showed evidence of a quantitative head-to-head photoreaction in all these three complexes, and SCXRD analysis of the recrystallization of the photoproducts also provided confirmation. TGA studies of these photoreactive complexes showed an increase in the thermal stability of the complexes due to the solid-state photoreaction. Photoluminescence studies of these complexes have been conducted, showing a blue shift in emission spectra across all three cases after the photoreaction. Full article
(This article belongs to the Special Issue Synthesis and Structure Analysis of Coordination Compounds)
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10 pages, 2580 KiB  
Article
Zinc(II) and Copper(II) Complexes of 4-Styrylpyridine and 1-Adamantanecarboxylic Acid: Syntheses, Crystal Structures, and Photopolymerization
by Dong Hee Lee, Jaewook An, Jihye Oh and In-Hyeok Park
Crystals 2023, 13(8), 1226; https://doi.org/10.3390/cryst13081226 - 9 Aug 2023
Cited by 1 | Viewed by 1476
Abstract
A combination of 4-styrylpyridine (spy) and 1-adamantanecarboxylic acid (Hadc) was employed in the assembly reactions with Zn(II) and Cu(II) nitrates. The photoreactivity of the products was compared and discussed on the basis of the structure–function relationship. Zinc(II) complex 1 is a trinuclear species [...] Read more.
A combination of 4-styrylpyridine (spy) and 1-adamantanecarboxylic acid (Hadc) was employed in the assembly reactions with Zn(II) and Cu(II) nitrates. The photoreactivity of the products was compared and discussed on the basis of the structure–function relationship. Zinc(II) complex 1 is a trinuclear species of type [Zn3(spy)2(adc)6] in which three zinc(II) atoms are linearly arranged, with two adjacent zinc(II) atoms linked by three bridging carboxylates. Two spy ligands occupy both terminal positions, yielding the overall structure of a six-bladed windmill. Copper(II) complex 2, [Cu(spy)2(adc)2][Cu2(spy)2(adc)4]·2DMF, is an inorganic cocrystal comprising a mononuclear complex with a trans square planar geometry and a dinuclear complex with a paddle-wheel structure. In the photoreaction experiments characterized by 1H NMR spectroscopy, the zinc(II) complex was found to be photoinert, while the copper(II) complex was photoreactive to form a cyclobutene ring via the [2+2] photodimerization between two spy ligands, resulting in the preparation of a one-dimensional chain as a coordination polymer. The separations of the C=C bond pair obtained from the crystal structures for both products also support their photoreactivity. For example, the spy ligands from two adjacent monocopper(II) complexes are aligned in a head-to-tail manner with the separation of 3.899 Å between the C=C bond pair, satisfying the so-called Schmidt criteria (<4.2 Å). However, no other products satisfy this condition. Full article
(This article belongs to the Special Issue Feature Papers in Crystals 2023)
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14 pages, 2426 KiB  
Article
Suspended Sediments in Environmental Flows: Interpretation of Concentration Profiles Shapes
by Rafik Absi
Hydrology 2023, 10(1), 5; https://doi.org/10.3390/hydrology10010005 - 25 Dec 2022
Cited by 2 | Viewed by 4863
Abstract
In environmental flows, field and laboratory measurements of suspended sediments show two kinds of concentration profiles. For coarse sediments, a near-bed upward convex profile is observed beneath the main upward concave profile. In this study, we consider two 1-DV models, namely, the classical [...] Read more.
In environmental flows, field and laboratory measurements of suspended sediments show two kinds of concentration profiles. For coarse sediments, a near-bed upward convex profile is observed beneath the main upward concave profile. In this study, we consider two 1-DV models, namely, the classical advection–diffusion equation (ADE) based on the gradient diffusion model, and the kinetic model. Both need sediment diffusivity, which is related to the eddy viscosity, and an y-dependent β-function (i.e., the inverse of the turbulent Schmidt number). Our study shows that the kinetic model reverts to the classical ADE with an “apparent” settling velocity or sediment diffusivity. For the numerical resolution of the ADE, simple and accurate tools are provided for both the sediment diffusivity and hindered settling. The results for the concentration profiles show good agreement with the experimental data. An interpretation of the concentration profiles is provided by two “criteria” for shapes. The main for steady open-channel flows shows that the shape of the concentration profiles in the Cartesian coordinate depends on the vertical distribution of the derivative of R (the ratio between the sediment diffusivity and the settling velocity of the sediments): dR/dy > −1 for the upward concave concentration profile while dR/dy < −1 for the near-bed upward convex profile. A generalization is proposed for oscillatory flows over sand ripples, where the time-averaged concentration profiles in the semi-log plots are interpreted by a relation between the second derivative of the logarithm of the concentration and the derivative of the product between the sediment diffusivity and an additional parameter related to the convective sediment entrainment process. Full article
(This article belongs to the Special Issue Recent Advances in Water and Water Resources Engineering)
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24 pages, 12134 KiB  
Article
A Novel Image Fusion Method of Multi-Spectral and SAR Images for Land Cover Classification
by Yinghui Quan, Yingping Tong, Wei Feng, Gabriel Dauphin, Wenjiang Huang and Mengdao Xing
Remote Sens. 2020, 12(22), 3801; https://doi.org/10.3390/rs12223801 - 19 Nov 2020
Cited by 51 | Viewed by 5744
Abstract
The fusion of multi-spectral and synthetic aperture radar (SAR) images could retain the advantages of each data, hence benefiting accurate land cover classification. However, some current image fusion methods face the challenge of producing unexpected noise. To overcome the aforementioned problem, this paper [...] Read more.
The fusion of multi-spectral and synthetic aperture radar (SAR) images could retain the advantages of each data, hence benefiting accurate land cover classification. However, some current image fusion methods face the challenge of producing unexpected noise. To overcome the aforementioned problem, this paper proposes a novel fusion method based on weighted median filter and Gram–Schmidt transform. In the proposed method, Sentinel-2A images and GF-3 images are respectively subjected to different preprocessing processes. Since weighted median filter does not strongly blur edges while filtering, it is applied to Sentinel-2A images for reducing noise. The processed Sentinel images are then transformed by Gram–Schmidt with GF-3 images. Two popular methods, principal component analysis method and traditional Gram–Schmidt transform, are used as the comparison methods in the experiment. In addition, random forest, a powerful ensemble model, is adopted as the land cover classifier due to its fast training speed and excellent classification performance. The overall accuracy, Kappa coefficient and classification map of the random forest are used as the evaluation criteria of the fusion method. Experiments conducted on five datasets demonstrate the superiority of the proposed method in both objective metrics and visual impressions. The experimental results indicate that the proposed method can improve the overall accuracy by up to 5% compared to using the original Sentinel-2A and has the potential to improve the satellite-based land cover classification accuracy. Full article
(This article belongs to the Section Remote Sensing Image Processing)
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33 pages, 532 KiB  
Article
Corporate Social Responsibility Disclosure and Performance: A Meta-Analytic Approach
by Dolores Gallardo-Vázquez, María J. Barroso-Méndez, María L. Pajuelo-Moreno and Julio Sánchez-Meca
Sustainability 2019, 11(4), 1115; https://doi.org/10.3390/su11041115 - 20 Feb 2019
Cited by 48 | Viewed by 8816
Abstract
Currently, a lack of consensus exists in the literature on the link between performance and corporate social responsibility disclosure (CSRD). A meta-analysis was carried out to shed light on this controversial topic, using the ABI/Inform Complete and EconLit databases as search tools. To [...] Read more.
Currently, a lack of consensus exists in the literature on the link between performance and corporate social responsibility disclosure (CSRD). A meta-analysis was carried out to shed light on this controversial topic, using the ABI/Inform Complete and EconLit databases as search tools. To isolate articles with substantive, methodological relevance, various filters were used. In addition to other criteria, all articles had to contain certain keywords related to the study’s variables and at least one of the seven keywords indicating empirical data analysis. As a result of this procedure, the meta-analysis included only 95 articles. To process the sample, we employed the procedure developed by Hunter and Schmidt. The results show that the CSRD-performance relationship is not significant enough for practical purposes. However, an analysis of moderating variables revealed that the connection becomes of practical importance when moderated by three key variables: region, type of disclosure, and measures of organization size. This research’s findings make a significant contribution by clarifying the links between CSRD and performance and identifying which variables can explain the diverse results of previous research. Regarding limitations, the meta-analysis was subject to the availability of published research and included only studies that reported Pearson correlation coefficients and standardized beta coefficients. Full article
(This article belongs to the Section Economic and Business Aspects of Sustainability)
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27 pages, 5814 KiB  
Article
Toward a Distinct and Quantitative Validation Method for Predictive Process Modelling—On the Example of Solid-Liquid Extraction Processes of Complex Plant Extracts
by Maximilian Sixt, Lukas Uhlenbrock and Jochen Strube
Processes 2018, 6(6), 66; https://doi.org/10.3390/pr6060066 - 1 Jun 2018
Cited by 44 | Viewed by 8972
Abstract
Physico-chemical modelling and predictive simulation are becoming key for modern process engineering. Rigorous models rely on the separation of different effects (e.g., fluid dynamics, kinetics, mass transfer) by distinct experimental parameter determination on lab-scale. The equations allow the transfer of the lab-scale data [...] Read more.
Physico-chemical modelling and predictive simulation are becoming key for modern process engineering. Rigorous models rely on the separation of different effects (e.g., fluid dynamics, kinetics, mass transfer) by distinct experimental parameter determination on lab-scale. The equations allow the transfer of the lab-scale data to any desired scale, if characteristic numbers like e.g., Reynolds, Péclet, Sherwood, Schmidt remain constant and fluid-dynamics of both scales are known and can be described by the model. A useful model has to be accurate and therefore match the experimental data at different scales and combinations of process and operating parameters. Besides accuracy as one quality attribute for the modelling depth, model precision also has to be evaluated. Model precision is considered as the combination of modelling depth and the influence of experimental errors in model parameter determination on the simulation results. A model is considered appropriate if the deviation of the simulation results is in the same order of magnitude as the reproducibility of the experimental data to be substituted by the simulation. Especially in natural product extraction, the accuracy of the modelling approach can be shown through various studies including different feedstocks and scales, as well as process and operating parameters. Therefore, a statistics-based quantitative method for the assessment of model precision is derived and discussed in detail in this paper to complete the process engineering toolbox. Therefore a systematic workflow including decision criteria is provided. Full article
(This article belongs to the Special Issue Process Modelling and Simulation)
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