Search Results (1,725)

Imidazothiazoles are important and attractive scaffolds for the design of potential biologically active small molecules. Dialkylenamines are convenient building blocks and are often used as intermediate reagents for the synthesis of various heterocyclic systems such as pyrimidine, pyridine, pyrazole, etc. In the present paper, the simple and effective synthesis of (Z)-6-((dimethylamino)methylene)-2-methyl-2,3-dihydroimidazo[2,1-b]thiazol-5(6H)-one (2) is reported. The proposed method, based on the reflux of 2-methyl-2,3-dihydroimidazo[2,1-b]thiazol-5(6H)-one with N,N-dimethylformamide dimethyl acetal, leads to an 80% yield of title compound 2. The structure of the synthesized compound 2 was confirmed using ¹H, ¹³C NMR, and LC-MS spectra. The applied protocol demonstrates practical advantages such as the absence of a solvent, a simple work-up, and the possibility of scale-up. Full article

Litchi (Litchi chinensis Sonn.) is a popular subtropical fruit with a red pericarp that is primarily determined by the accumulation of anthocyanins. The peel color and fruit quality are also influenced by proanthocyanins (PAs), which play roles in fruit development and postharvest quality. In this study, we identified LcMYB2 as a key regulator of both anthocyanin and PA biosynthesis in litchi. Phylogenetic analysis revealed that LcMYB2 belongs to the VvMYB5 subclade. Expression analysis showed that LcMYB2 is highly expressed in the early stages of fruit development. Its expression pattern was consistent with that of LcLAR and LcANR, two key genes in the PA biosynthetic pathway. Subcellular localization and protein–protein interaction assays confirmed that LcMYB2 localizes to the nucleus and interacts with LcbHLH3. Dual-luciferase reporter assays demonstrated that the LcMYB2-LcbHLH3 complex activates the promoters of LcLAR and LcANR, supporting its role in regulating PA biosynthesis. Furthermore, overexpression of LcMYB2 in tobacco resulted in the synthesis of anthocyanins and PAs in the flower, indicating that LcMYB2 can regulate anthocyanin and PA biosynthesis. Additionally, transgenic tobacco plants with LcMYB2 overexpression exhibited delayed anther dehiscence, suggesting a broader role in plant development. These findings highlight the multifunctional nature of LcMYB2 in regulating both anthocyanin and PA biosynthesis, as well as its involvement in reproductive development. Full article

Kunzea ericoides (kanuka), a native plant of New Zealand, has a significant role in traditional medicine due to the presence of essential oils. Apart from these oils, this plant also is a source of many bioactive compounds, majority of which are polyphenols. However, there is lack of sufficient data supporting the extraction of polyphenols from kanuka plant leaves and investigating its bioactivity and phytochemical properties. The study aims to extract polyphenols from kanuka plant leaves with a conventional solvent-based method and determine the phytochemical analysis as well as bioactive potential. Extraction was performed with methanol and acetone as solvents. Polyphenolic prolife was analyzed with LC-MS. Bioactive analysis of kanuka leaf extract was carried out to determine total phenolic content and antioxidant activity. We investigated the cytotoxic effect of kanuka leaf extract on two triple-negative breast cancer cells—MDA-MB-231 and BT-549. LC-MS analysis confirmed kanuka leaf extract is a source of many polyphenols, some giving very prominent signals on TIC scan. Ten polyphenolic compounds were confirmed to be present in kanuka leaf extract based on MRM analysis. FRAP-CUPRAC analysis indicated significant antioxidant activity in the kanuka leaf extract. Antiproliferative analysis has confirmed cytotoxicity of the kanuka leaf extract on the triple-negative breast cancer cell lines. This study indicates that Kunzea ericoides leaf extract, rich in polyphenols, shows promising antioxidant and antiproliferative potential, warranting further investigation for therapeutic applications. Full article

Honey is a natural product of high nutritional and therapeutic value, whose biological properties are closely linked to its botanical origin and chemical composition. This study aimed to characterize avocado honey in terms of botanical origin, physicochemical parameters, phenolic content, antioxidant activity, chemical profile by LC-MS/MS, and antibacterial potential. Melissopalynological analysis revealed 86.21% avocado pollen, allowing classification as monofloral honey. The sample presented amber color and a high total phenolic content (269.79 ± 1.10 mg GAE 100 g⁻¹), values higher than those commonly reported for Brazilian and international honeys. Antioxidant activity, assessed by the DPPH method, confirmed the strong radical-scavenging capacity, consistent with the phenolic profile identified (EC₅₀ 10.250 ± 0.003 mg mL⁻¹). LC-MS/MS analysis allowed the annotation of nine compounds, including caffeine, scopoletin, abscisic acid, and vomifoliol, compounds associated with antioxidant, anti-inflammatory, and metabolic regulatory activities. Although no antibacterial effect was detected against the tested oral bacterial strains, the results highlight the chemical diversity and functional potential of avocado honey. Overall, the findings reinforce the bioactive potential of avocado honey, particularly due to its strong antioxidant capacity and diversity of metabolites, supporting its value as a natural resource of nutritional and therapeutic interest. Full article

Background/Objectives: Lithocarpus litseifolius (Hance) Chun, also known as sweet tea, is a traditional Chinese tea-making plant. Acute lung injury (ALI), a life-threatening syndrome with symptoms like hypoxemia and dyspnea, can be triggered by infection or trauma, with high morbidity and mortality. Whether the water extract of Lithocarpus litseifolius (WEL) has therapeutic effects on ALI remains unclear. This study aimed to analyze WEL’s components, establish in vitro cellular inflammation and mouse ALI models, and investigate WEL’s protective effects against LPS-induced ALI. Methods: LC-MS analysis identified 42 compounds in WEL and quantified three key ones. In an LPS-induced mouse ALI model, WEL significantly reduced lung injury severity, lung wet-to-dry ratio, pulmonary edema, and levels of NO, ROS, IL-1β, TNF-α, and MPO in lung tissues and bronchial alveolar lavage fluid. Immunohistochemical analysis showed WEL pretreatment inhibited the upregulation of NLRP3, Caspase-1, and GSDMD-NT expression, mitigated tissue oxidative stress and cell pyroptosis, and alleviated ALI severity in mice. Cellular experiments confirmed WEL’s protective effects via anti-inflammatory, antioxidant actions, and inhibiting cell pyroptosis, with phlorizin and trilobatin as potential key active ingredients. Conclusions: This research demonstrates sweet tea’s significant protective effects against ALI and its potential to alleviate inflammation by inhibiting pyroptosis, providing a theoretical basis for developing new health-promoting functions of sweet tea. Full article

In this study, we constructed an extraction process for bovine lung peptide-1 (BLP-1) derived from bovine lung tissue utilizing single-factor optimization combined with response surface methodology. We systematically analyzed its antioxidant activity, biological safety, and therapeutic mechanisms against alcoholic liver disease (ALD). In vitro experiments demonstrated that BLP-1 exhibits excellent scavenging activity against various free radicals, while exhibiting no significant cytotoxicity or hemolytic activity. In a model of H₂O₂-induced oxidative damage in HepG2 cells, BLP-1 significantly alleviated oxidative stress injury by upregulating the activities of intracellular antioxidant enzymes. Animal experiments further confirmed that BLP-1 significantly reduced serum levels of transaminase, inhibited the release of inflammatory factors, enhanced antioxidant enzyme activity, and ameliorated lipid peroxidation and pathological injury in ALD mice. By combining liquid chromatography-tandem mass spectrometry (LC-MS/MS) with bioinformatics, we screened 12 novel antioxidant peptides. Among these, the binding energies of GP9, FG6, and WG6 to Keap1 were −10.2, −9.7, and −8.7 kcal/mol, respectively, indicating their potential to modulate the antioxidant defense system through competitive inhibition of Keap1-Nrf2 interactions. This study provides a novel approach for the high-value utilization of bovine lung and the treatment of ALD, as well as a new source for the extraction of natural antioxidant peptides. Full article

Acid mine drainage (AMD) environments feature extreme acidity (pH ≤ 2) and high heavy metal concentrations. Acidophiles survive these conditions through unique genetic adaptations and secondary metabolite (SM) pathways. Leptospirillum ferriphilum, known for its acid and heavy metal resistance, serves as a model for AMD bioremediation, though systematic multi-omics studies on its key SMs and biosynthesis pathways remain underexplored. In this study, L. ferriphilum YR01 was isolated and identified from the AMD of the Zijinshan copper mine, China. Pangenomic analysis revealed that YR01 possesses the largest number of genes (2623) among the eight sequenced L. ferriphilum strains. Comparative genomics, antiSMASH, BiG-SCAPE, and metabolomic analyses (LC-MS and HPLC-MS) were integrated to comprehensively explore its biosynthetic capacity. A total of 39 biosynthetic gene clusters (BGCs) were identified, of which 60% shared <50% similarity with known clusters, indicating substantial novel biosynthetic potential. The sequence alignment of SM biosynthetic gene clusters (BGCs) demonstrated the potential of L. ferriphilum to synthesize conserved clusters for ectoine, choline, carotenoids, terpenoids, and terpene precursors. YR01 harbors complete BGCs for all five SM types. Notably, key nonribosomal peptide synthetase (NRPS) modules implicated in N-acyl homoserine lactone (AHL) synthesis were identified. Untargeted metabolomics (LC-MS) revealed the production of diverse SMs (18 types) putatively involved in environmental adaptation, including phosphocholine, carotenoids (e.g., anteraxanthin), cholera autoinducer-1 (CAI-1), and multiple AHLs. Targeted detection (HPLC-MS) further confirmed that YR01 could produce ectoine (0.10 ng/mL) and specific AHLs (C₁₄-HSL, C₁₂-HSL, C₁₂-OH-HSL), which were beneficial for the survival of the strain in extremely acidic environments and interspecies communication through SMs. This study represents the first comprehensive multi-omics characterization of BGCs in L. ferriphilum and experimentally validates the production of key SMs. Collectively, this study provides a comprehensive elucidation of the SM biosynthetic repertoire and environmental adaptation strategies in L. ferriphilum, advancing our understanding of microbial adaptation and interspecies communication in AMD systems, and offering potential implications for biomining applications. Full article

In this study, insoluble CaSO₃ was applied to replace soluble sulfite/bisulfite salt in the Fe(II)-activated sulfite/bisulfite [S(IV)] process for the efficient 2,4,6-tribromophenol (TBP) degradation. CaSO₃ serves as a low-cost and slow-release source of S(IV), significantly improving S(IV) utilization compared to conventional soluble Na₂SO₃. The Fe(II)/CaSO₃ system generated SO₄^•− and HO^• through Fe(II)/Fe(III) redox cycling. Mechanistic studies confirmed SO₄^•− as the dominant reactive species, selectively attacking C-Br bonds and hydroxyl groups in TBP. Process optimization revealed effective performance under acidic conditions (pH 3.5–4.0) with minimal inhibition by common anions (Cl⁻, HCO₃⁻). The reactive sites of TBP were identified through Fukui function calculations, and the degradation pathway was elucidated based on LC-MS analysis. Toxicity evaluation indicated reduced ecological risk of degradation intermediates due to debromination and benzene ring cleavage. This work provides a sustainable strategy for efficient TBP removal and detoxification in wastewater treatment with benefiting S(IV) utilization. Full article

Colorectal cancer treatment primarily relies on chemotherapy, which often causes significant side effects. Sacha inchi, a plant known in traditional medicine, has shown promise in various therapeutic applications. However, despite its potential, the specific mechanisms remain poorly understood, particularly regarding its husk components. This study investigates sacha inchi husk extract’s chemical properties and its effects on human colorectal cancer cells. GC/MS and LC/MS analyses revealed a rich profile of phenolic and flavonoid compounds, with naringenin and lidocaine as predominant components. The extract demonstrated significant dose-dependent inhibition of colorectal cell migration, invasion, and colony formation while exhibiting no cytotoxicity toward normal colon epithelial cells. Transcriptomic and proteomic analyses showed downregulation of migration- and invasion-related genes in cancer cells, and Western blot analysis confirmed reduced expression of MMP2, MMP9, and N-cadherin. EGFR pathway analysis showed decreased expression of RAS (−0.2-fold), MAK (−0.26-fold), and ERK (−0.54-fold) genes, indicating suppression of epithelial–mesenchymal transition (EMT). These findings demonstrate that sacha inchi husk extract effectively inhibits metastasis in colorectal cancer cells through the upstream (EGFR) and downstream (EMT) pathways, suggesting its potential as a dietary supplement or therapeutic agent for colorectal cancer treatment. Our research provides evidence for the development of natural, less toxic alternatives. Full article

Lung cancer (LC) remains a leading cause of cancer mortality worldwide, where accurate and early identification of gene mutations such as epidermal growth factor receptor (EGFR) is critical for precision treatment. However, machine learning-based radiomics approaches often face challenges due to the small and imbalanced nature of the datasets. This study proposes a comprehensive framework based on Generic Sparse Regularized Autoencoders with Kullback–Leibler divergence (GSRA-KL) to generate high-quality synthetic radiomics data and overcome these limitations. A systematic approach generated 63 synthetic radiomics datasets by tuning a novel kl_weight regularization hyperparameter across three hidden-layer sizes, optimized using Optuna for computational efficiency. A rigorous assessment was conducted to evaluate the impact of hyperparameter tuning across 63 synthetic datasets, with a focus on the EGFR gene mutation. This evaluation utilized resemblance-dimension scores (RDS), novel utility-dimension scores (UDS), and t-SNE visualizations to ensure the validation of data quality, revealing that GSRA-KL achieves excellent performance (RDS > 0.45, UDS > 0.7), especially when class distribution is balanced, while remaining competitive with the Tabular Variational Autoencoder (TVAE). Additionally, a comprehensive statistical correlation analysis demonstrated strong and significant monotonic relationships among resemblance-based performance metrics up to moderate scaling (≤1.0*), confirming the robustness and stability of inter-metric associations under varying configurations. Complementary computational cost evaluation further indicated that moderate kl_weight values yield an optimal balance between reconstruction accuracy and resource utilization, with Spearman correlations revealing improved reconstruction quality (MSE $\rho =-0.78$, $p<0.001$) at reduced computational overhead. The ablation-style analysis confirmed that including the KL divergence term meaningfully enhances the generative capacity of GSRA-KL over its baseline counterpart. Furthermore, the GSRA-KL framework achieved substantial improvements in computational efficiency compared to prior PSO-based optimization methods, resulting in reduced memory usage and training time. Overall, GSRA-KL represents an incremental yet practical advancement for augmenting small and imbalanced high-dimensional radiomics datasets, showing promise for improved mutation prediction and downstream precision oncology studies. Full article

Female infertility, affecting millions worldwide, involves complex molecular mechanisms such as chronic inflammation, impaired cellular death, and protein regulation. This study explores how the cytokine IL-6, the autophagy marker LC3, ubiquitination process, and three miRNAs, miR-146a-5p, miR-9-5p, and miR-9-3p, contribute to the control of ovarian function and female infertility. Two expression profile datasets (GSE199225 and GSE146856) were screened and downloaded from GEO. DEGs were screened using the GEO2R and ggVennDiagram tools. The three miRNAs were retrieved from datasets using the multiMiR tool, and IL6-targeted genes were retrieved from MSigDB. IL6 and miRNA interaction networks were constructed. Further, the cross-correlation of LC3 and ubiquitination with the DEGs associated miRNAs was demonstrated. Meanwhile, GO/KEGG pathway enrichment analyses and molecular network interaction analysis were performed. Lastly, immunohistochemistry and quantitative PCR (qPCR) were used to confirm the expression of IL6, LC3, and miRNA in ovarian endometrial tissues compared to control tissues. The results showed that IL-6 drives inflammation in conditions of PCOS and ovarian endometriosis, which then disrupts ovulation and embryo implantation. miR-146a-5p reduced inflammation by targeting the gene TRAF6, while miR-9-5p regulated protein degradation via SQSTM1. In agreement with the bioinformatic approach, experimental analysis revealed reduced IL6 protein expression in ovarian endometriosis tissues while the mRNA IL6 level was increased, suggesting the presence of post-transcriptional regulatory mechanisms that act to limit excessive inflammation, probably through miRNAs. Indeed, the levels of miR-146a-5, which plays a role in immune modulation and inflammatory signaling, were significantly upregulated. Interestingly, an alteration in autophagic markers revealed by elevated LC3 was also observed. Aligned with these experimental data, bioinformatic analysis showed that autophagy genes LC3 and ATG5 and ubiquitination processes were tightly linked to ovarian health, with disruptions accelerating follicle loss and oxidative damage. In conclusion, the results showed that IL-6, miRNAs, and autophagy processes work together to control inflammation and cellular repair in ovarian disorders. This study opens new avenues for targeted treatments to improve fertility outcomes by connecting molecular networks to clinical insights. Full article

Background: Diabetes mellitus adversely affects female reproductive health by inducing oxidative stress, impairing autophagy, and promoting fibrotic remodeling in ovarian and uterine tissues. Spermidine, a natural polyamine, has gained attention as an antioxidant and autophagy enhancer. This study aimed to investigate the potential protective role of spermidine against diabetes-induced reproductive injury in rats. Methods: Thirty adult female Wistar rats were randomly divided into three groups (n = 10 each): Control, Diabetes, and Diabetes + Spermidine. Diabetes was induced with streptozotocin (60 mg/kg, i.p.). After confirmation of hyperglycemia (≥250 mg/dL), rats received either saline or spermidine (40 mg/kg/day, oral gavage) for four weeks. At sacrifice, plasma anti-Müllerian hormone (AMH) levels were determined, and ovarian and uterine tissues were assessed histologically and biochemically for oxidative stress markers (GSH, MDA, Nrf2), autophagy proteins (LC3, Beclin-1), and fibrosis indicators (TGF-β, histological scoring). Results: Diabetic rats exhibited severe hyperglycemia, pronounced follicular and endometrial degeneration, increased fibrosis, reduced plasma AMH, depleted GSH, SOD, CAT, GPx and Nrf2, and elevated MDA (p < 0.001). Spermidine treatment significantly mitigated these alterations, lowering glucose levels, alleviating histopathological injury, elevating the antioxidant defense (GSH, SOD, CAT, GPx) and the Nrf2 and decreasing MDA and TGF-β concentrations (p < 0.05 vs. Diabetes). Moreover, spermidine supplementation enhanced LC3 and Beclin-1 expression, suggesting improved autophagic activity. Conclusions: Spermidine counteracts diabetes-induced ovarian and uterine damage by reinforcing antioxidant defense, stimulating autophagy, and limiting fibrosis. These findings highlight spermidine as a promising adjunctive agent to support female reproductive health under diabetic conditions. Full article

Cortisol dysregulation has been proposed as a biomarker of long COVID (LC), but findings remain inconsistent. Prior reports suggested low cortisol levels in LC, yet collection times and study designs varied substantially. To evaluate morning serum cortisol distributions in an independent LC cohort, accounting for circadian timing and sleep patterns, we performed a retrospective cross-sectional study of consecutive adults seen at the Stanford Long COVID Clinic between 14 February 2022 and 31 July 2024 (IRB #62996). Eligible participants had confirmed SARS-CoV-2 infection, symptoms persisting ≥3 months per NASEM criteria, completion of the Alliance Sleep Questionnaire (ASQ), and a morning serum cortisol measured using the Roche Elecsys^® Cortisol II assay. Analyses were restricted to collections between 05:00–10:00, categorized as early morning peak (EMP: 05:00–08:00) or mid-morning (MMP: 08:01–10:00). Cortisol was classified as low (<6.2 μg/dL), normal (6.2–19.4 μg/dL), or elevated (>19.4 μg/dL). Among 86 LC patients (69.8% female; mean age 45.4 ± 12.9 years), the mean serum cortisol level was 15.67 ± 6.76 μg/dL. Overall, 62.8% of patients had cortisol within the reference range, 36.0% had elevated levels, and only 1.2% (n = 1) had a low value. Cortisol distributions were comparable across the EMP and MMP collection windows, with no statistically significant differences observed by sleep alignment. Inflammatory markers, including CRP and D-dimer, were largely within reference ranges across all cortisol strata. Contrary to earlier reports, low morning cortisol was rare in this LC cohort; most values were normal or elevated. Findings underscore the importance of circadian timing when interpreting cortisol in LC and highlight the need for prospective studies with serial measurements to determine biomarker utility. Full article

Gnetol (trans-2,3′,5′,6-tetrahydroxystilbene), a naturally occurring stilbene structurally related to resveratrol (trans-3,5,4′-trihydroxystilbene; RES), has been reported to possess multiple health-promoting activities. In order to support its potential nutraceutical application, a reliable chromatography–tandem mass spectrometry (LC–MS/MS) assay was developed and validated for the quantitative determination of gnetol in mouse plasma and tissue samples, using isotopically labeled RES-¹³C₆ serving as the internal standard (IS). Electrospray ionization (ESI) was performed in negative mode, with multiple reaction monitoring (MRM) transitions m/z 243.2 → 175.0 for gnetol and m/z 233.1 → 191.0 for the IS. Chromatographic separation was achieved on a reversed-phase HPLC column using a 5-min gradient delivery of acetonitrile and 2 mM ammonium acetate at 0.5 mL/min and 40 °C. The linear calibration curve covered the concentration range of 5.0–1500 ng/mL, and the method validation confirmed its selectivity, accuracy, precision, stability, and dilution integrity. The developed method was subsequently applied to a biodistribution study in mice after oral administration of gnetol at 400 µmol/kg (equivalent to 97.7 mg/kg). Gnetol was rapidly absorbed and extensively distributed in key pharmacologically relevant organs. Despite its poor aqueous solubility, oral uptake was not significantly hindered. Collectively, these findings demonstrate that gnetol exhibits favorable absorption and tissue distribution profiles, supporting its promise as a candidate for nutraceutical development. Full article

Avocado (Persea americana Mill.) is one of the most widely consumed fruits worldwide. The tree species is traditionally classified into three botanical races: Mexican, Guatemalan, and West Indian (with a potentially distinct Colombian genepool). However, previous studies using molecular markers, such as AFLPs, microsatellites (SSRs), and GBS-derived SNP markers, have only partially resolved this racial divergence, especially in the hyper agrobiodiverse region of northwest South America. Therefore, in order to confirm genetic identity and origin of “criollo” avocado cultivars in the region, as well as to improve their traceability as rootstocks for the Hass variety, we performed low-coverage whole genome resequencing (lcWGS) on 205 ex situ conserved tree samples, comprising 42 commercial varieties and 163 “criollo” trees from various provinces in Colombia. This characterization yielded a total of 64,310,961 SNPs at an average coverage of 4.69×. Population structure analysis using principal component analysis (PCA) and ADMIXTURE retrieved at least five genetic clusters (K = 5), partly confirmed by Bayesian phylogenetic inference. Three clusters matched the recognized Mesoamerican botanical races (Mexican, Guatemalan, and West Indian), and two clusters reinforced the distinctness of two novel Andean and Caribbean Colombian genetic groups. Finally, in order to retrieve high-quality SNP markers for racial screening, a second genomic dataset was filtered, consisting of 68 avocado tree samples exhibiting more than 80% ancestry to a given racial cluster, and 9826 SNPs with a minimum allele frequency (maf) of 5%, a minimum sequencing depth (SD) of 10× per position, and missing data per variant not exceeding 20% (i.e., variants with genotypes present in at least 80% of the samples). This racially segregating high-quality subset was analyzed against the racial substructure using linear mixed models (LMMs), enabling the identification of 254 SNP markers associated with the five avocado genetic races. The previous candidate SNPs may be leveraged by nurseries and producers through a high-throughput SNP screening system for the racial traceability of seedling donor trees, saplings, and rootstocks. These genomic resources will support the selection of regionally adapted elite rootstocks and represent a landmark in Colombian horticulture as the first large-scale lcWGS-based characterization of a local avocado germplasm collection. Full article