Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Article Types

Countries / Regions

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Search Results (628)

Search Parameters:
Keywords = D-stability regions

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
27 pages, 16782 KiB  
Article
Response of Grain Yield to Extreme Precipitation in Major Grain-Producing Areas of China Against the Background of Climate Change—A Case Study of Henan Province
by Keding Sheng, Rui Li, Fengqiuli Zhang, Tongde Chen, Peng Liu, Yanan Hu, Bingyin Li and Zhiyuan Song
Water 2025, 17(15), 2342; https://doi.org/10.3390/w17152342 - 6 Aug 2025
Abstract
Based on the panel data of daily meteorological stations and winter wheat yield in Henan Province from 2000 to 2023, this study comprehensively used the Mann–Kendall trend test, wavelet coherence analysis (WTC), and other methods to reveal the temporal and spatial evolution of [...] Read more.
Based on the panel data of daily meteorological stations and winter wheat yield in Henan Province from 2000 to 2023, this study comprehensively used the Mann–Kendall trend test, wavelet coherence analysis (WTC), and other methods to reveal the temporal and spatial evolution of extreme precipitation and its multi-scale stress mechanism on grain yield. The results showed the following: (1) Extreme precipitation showed the characteristics of ‘frequent fluctuation-gentle trend-strong spatial heterogeneity’, and the maximum daily precipitation in spring (RX1DAY) showed a significant uplift. The increase in rainstorm events (R95p/R99p) in the southern region during the summer is particularly prominent; at the same time, the number of consecutive drought days (CDDs > 15 d) in the middle of autumn was significantly prolonged. It was also found that 2010 is a significant mutation node. Since then, the synergistic effect of ‘increasing drought days–increasing rainstorm frequency’ has begun to appear, and the short-period coherence of super-strong precipitation (R99p) has risen to more than 0.8. (2) The spatial pattern of winter wheat in Henan is characterized by the three-level differentiation of ‘stable core area, sensitive transition zone and shrinking suburban area’, and the stability of winter wheat has improved but there are still local risks. (3) There is a multi-scale stress mechanism of extreme precipitation on winter wheat yield. The long-period (4–8 years) drought and flood events drive the system risk through a 1–2-year lag effect (short-period (0.5–2 years) medium rainstorm intensity directly impacted the production system). This study proposes a ‘sub-scale governance’ strategy, using a 1–2-year lag window to establish a rainstorm warning mechanism, and optimizing drainage facilities for high-risk areas of floods in the south to improve the climate resilience of the agricultural system against the background of climate change. Full article
(This article belongs to the Special Issue Soil Erosion and Soil and Water Conservation, 2nd Edition)
Show Figures

Figure 1

25 pages, 1470 KiB  
Article
A Hybrid Path Planning Algorithm for Orchard Robots Based on an Improved D* Lite Algorithm
by Quanjie Jiang, Yue Shen, Hui Liu, Zohaib Khan, Hao Sun and Yuxuan Huang
Agriculture 2025, 15(15), 1698; https://doi.org/10.3390/agriculture15151698 - 6 Aug 2025
Abstract
Due to the complex spatial structure, dense tree distribution, and narrow passages in orchard environments, traditional path planning algorithms often struggle with large path deviations, frequent turning, and reduced navigational safety. In order to overcome these challenges, this paper proposes a hybrid path [...] Read more.
Due to the complex spatial structure, dense tree distribution, and narrow passages in orchard environments, traditional path planning algorithms often struggle with large path deviations, frequent turning, and reduced navigational safety. In order to overcome these challenges, this paper proposes a hybrid path planning algorithm based on improved D* Lite for narrow forest orchard environments. The proposed approach enhances path feasibility and improves the robustness of the navigation system. The algorithm begins by constructing a 2D grid map reflecting the orchard layout and inflates the tree regions to create safety buffers for reliable path planning. For global path planning, an enhanced D* Lite algorithm is used with a cost function that jointly considers centerline proximity, turning angle smoothness, and directional consistency. This guides the path to remain close to the orchard row centerline, improving structural adaptability and path rationality. Narrow passages along the initial path are detected, and local replanning is performed using a Hybrid A* algorithm that accounts for the kinematic constraints of a differential tracked robot. This generates curvature-continuous and directionally stable segments that replace the original narrow-path portions. Finally, a gradient descent method is applied to smooth the overall path, improving trajectory continuity and execution stability. Field experiments in representative orchard environments demonstrate that the proposed hybrid algorithm significantly outperforms traditional D* Lite and KD* Lite-B methods in terms of path accuracy and navigational safety. The average deviation from the centerline is only 0.06 m, representing reductions of 75.55% and 38.27% compared to traditional D* Lite and KD* Lite-B, respectively, thereby enabling high-precision centerline tracking. Moreover, the number of hazardous nodes, defined as path points near obstacles, was reduced to five, marking decreases of 92.86% and 68.75%, respectively, and substantially enhancing navigation safety. These results confirm the method’s strong applicability in complex, constrained orchard environments and its potential as a foundation for efficient, safe, and fully autonomous agricultural robot operation. Full article
(This article belongs to the Special Issue Perception, Decision-Making, and Control of Agricultural Robots)
30 pages, 4444 KiB  
Article
Unveiling the Potential of Novel Ternary Chalcogenide SrHfSe3 for Eco-Friendly, Self-Powered, Near-Infrared Photodetectors: A SCAPS-1D Simulation Study
by Salah Abdo, Ambali Alade Odebowale, Amer Abdulghani, Khalil As’ham, Sanjida Akter, Haroldo Hattori, Nicholas Kanizaj and Andrey E. Miroshnichenko
Sci 2025, 7(3), 113; https://doi.org/10.3390/sci7030113 - 6 Aug 2025
Abstract
Ternary chalcogenide-based sulfide materials with distorted morphologies such as BaZrS3, CaZrS3, and SrZrS3, have recently gained much attention in optoelectronics and photovoltaics due to their high structural and thermal stability and compatibility with low-cost, earth-abundant synthesis routes. [...] Read more.
Ternary chalcogenide-based sulfide materials with distorted morphologies such as BaZrS3, CaZrS3, and SrZrS3, have recently gained much attention in optoelectronics and photovoltaics due to their high structural and thermal stability and compatibility with low-cost, earth-abundant synthesis routes. However, their relatively large bandgaps often limit their suitability for near-infrared (NIR) photodetectors. Here, we conducted a comprehensive investigation of SrHfSe3, a ternary chalcogenide with an orthorhombic crystal structure and distinctive needle-like morphology, as a promising candidate for NIR photodetection. SrHfSe3 exhibits a direct bandgap of 1.02 eV, placing it well within the NIR range. Its robust structure, high temperature stability, phase stability and natural abundance make it a compelling material for next-generation, self-powered NIR photodetectors. An in-depth analysis of the SrHfSe3-based photodetector was performed using SCAPS-1D simulations, focusing on key performance metrics such as J–V behavior, photoresponsivity, and specific detectivity. Device optimization was achieved by thoroughly altering each layer thickness, doping concentrations, and defect densities. Additionally, the influence of interface defects, absorber bandgap, and operating temperature was assessed to enhance the photoresponse. Under optimal conditions, the device achieved a short-circuit current density (Jsc) of 45.88 mA/cm2, an open-circuit voltage (Voc) of 0.7152 V, a peak photoresponsivity of 0.85 AW−1, and a detectivity of 2.26 × 1014 Jones at 1100 nm. A broad spectral response spanning 700–1200 nm confirms its efficacy in the NIR region. These results position SrHfSe3 as a strong contender for future NIR photodetectors and provide a foundation for experimental validation in advanced optoelectronic applications. Full article
Show Figures

Figure 1

11 pages, 1461 KiB  
Article
Comparative Analysis of Orbital Morphology Accuracy in 3D Models Based on Cone-Beam and Fan-Beam Computed Tomography Scans for Reconstructive Planning
by Natalia Bielecka-Kowalska, Bartosz Bielecki-Kowalski and Marcin Kozakiewicz
J. Clin. Med. 2025, 14(15), 5541; https://doi.org/10.3390/jcm14155541 - 6 Aug 2025
Abstract
Background/Objectives: Orbital reconstruction remains one of the most demanding procedures in maxillofacial surgery. It requires not only precise anatomical knowledge but also poses multiple intraoperative challenges. Limited surgical visibility—especially in transconjunctival or transcaruncular approaches—demands exceptional precision from the surgeon. At the same time, [...] Read more.
Background/Objectives: Orbital reconstruction remains one of the most demanding procedures in maxillofacial surgery. It requires not only precise anatomical knowledge but also poses multiple intraoperative challenges. Limited surgical visibility—especially in transconjunctival or transcaruncular approaches—demands exceptional precision from the surgeon. At the same time, the complex anatomical structure of the orbit, its rich vascularization and innervation, and the risk of severe postoperative complications—such as diplopia, sensory deficits, impaired ocular mobility, or in the most serious cases, post-traumatic blindness due to nerve injury or orbital compartment syndrome—necessitate the highest level of surgical accuracy. In this context, patient-specific implants (PSIs), commonly fabricated from zirconium oxide or ultra-high-density polyethylene, have become invaluable. Within CAD-based reconstructive planning, especially for orbital implants, critical factors include the implant’s anatomical fit, passive stabilization on intact bony structures, and non-interference with orbital soft tissues. Above all, precise replication of the orbital dimensions is essential for optimal clinical outcomes. This study compares the morphological accuracy of orbital structures based on anthropometric measurements from 3D models generated from fan-beam computed tomography (FBCT) and cone-beam computed tomography (CBCT). Methods: A cohort group of 500 Caucasian patients aged 8 to 88 years was analyzed. 3D models of the orbits were generated from FBCT and CBCT scans. Anthropometric measurements were taken to evaluate the morphological accuracy of the orbital structures. The assessed parameters included orbital depth, orbital width, the distance from the infraorbital rim to the infraorbital foramen, the distance between the piriform aperture and the infraorbital foramen, and the distance from the zygomatico-orbital foramen to the infraorbital rim. Results: Statistically significant differences were observed between virtual models derived from FBCT and those based on CBCT in several key parameters. Discrepancies were particularly evident in measurements of orbital depth, orbital width, the distance from the infraorbital rim to the infraorbital foramen, the distance between the piriform aperture and the infraorbital foramen, and the distance from the zygomatico-orbital foramen to the infraorbital rim. Conclusions: The statistically significant discrepancies in selected orbital dimensions—particularly in regions of so-called thin bone—demonstrate that FBCT remains the gold standard in the planning and design of CAD/CAM patient-specific orbital implants. Despite its advantages, including greater accessibility and lower radiation dose, CBCT shows limited reliability in the context of orbital and infraorbital reconstruction planning. Full article
(This article belongs to the Special Issue State-of-the-Art Innovations in Oral and Maxillofacial Surgery)
Show Figures

Figure 1

20 pages, 25227 KiB  
Article
Sedimentary Model of Sublacustrine Fans in the Shahejie Formation, Nanpu Sag
by Zhen Wang, Zhihui Ma, Lingjian Meng, Rongchao Yang, Hongqi Yuan, Xuntao Yu, Chunbo He and Haiguang Wu
Appl. Sci. 2025, 15(15), 8674; https://doi.org/10.3390/app15158674 (registering DOI) - 5 Aug 2025
Abstract
The Shahejie Formation in Nanpu Sag is a crucial region for deep-layer hydrocarbon exploration in the Bohai Bay Basin. To address the impact of faults on sublacustrine fan formation and spatial distribution within the study area, this study integrated well logging, laboratory analysis, [...] Read more.
The Shahejie Formation in Nanpu Sag is a crucial region for deep-layer hydrocarbon exploration in the Bohai Bay Basin. To address the impact of faults on sublacustrine fan formation and spatial distribution within the study area, this study integrated well logging, laboratory analysis, and 3D seismic data to systematically analyze sedimentary characteristics of sandbodies from the first member of the Shahejie Formation (Es1) sublacustrine fans, clarifying their planar and cross-sectional distributions. Further research indicates that Gaoliu Fault activity during Es1 deposition played a significant role in fan development through two mechanisms: (1) vertical displacement between hanging wall and footwall reshaped local paleogeomorphology; (2) tectonic stresses generated by fault movement affected slope stability, triggering gravitational mass transport processes that remobilized fan delta sediments into the central depression zone as sublacustrine fans through slumping and collapse mechanisms. Core observations reveal soft-sediment deformation features, including slump structures, flame structures, and shale rip-up clasts. Seismic profiles show lens-shaped geometries with thick centers thinning laterally, exhibiting lateral pinch-out terminations. Inverse fault-step architectures formed by underlying faults control sandbody distribution patterns, restricting primary deposition locations for sublacustrine fan development. The study demonstrates that sublacustrine fans in the study area are formed by gravity flow processes. A new model was established, illustrating the combined control of the Gaoliu Fault and reverse stepover faults on fan development. These findings provide valuable insights for gravity flow exploration and reservoir prediction in the Nanpu Sag, offering important implications for hydrocarbon exploration in similar lacustrine rift basins. Full article
Show Figures

Figure 1

25 pages, 4865 KiB  
Article
Mathematical Modeling, Bifurcation Theory, and Chaos in a Dusty Plasma System with Generalized (r, q) Distributions
by Beenish, Maria Samreen and Fehaid Salem Alshammari
Axioms 2025, 14(8), 610; https://doi.org/10.3390/axioms14080610 - 5 Aug 2025
Abstract
This study investigates the dynamics of dust acoustic periodic waves in a three-component, unmagnetized dusty plasma system using generalized (r,q) distributions. First, boundary conditions are applied to reduce the model to a second-order nonlinear ordinary differential equation. [...] Read more.
This study investigates the dynamics of dust acoustic periodic waves in a three-component, unmagnetized dusty plasma system using generalized (r,q) distributions. First, boundary conditions are applied to reduce the model to a second-order nonlinear ordinary differential equation. The Galilean transformation is subsequently applied to reformulate the second-order ordinary differential equation into an unperturbed dynamical system. Next, phase portraits of the system are examined under all possible conditions of the discriminant of the associated cubic polynomial, identifying regions of stability and instability. The Runge–Kutta method is employed to construct the phase portraits of the system. The Hamiltonian function of the unperturbed system is subsequently derived and used to analyze energy levels and verify the phase portraits. Under the influence of an external periodic perturbation, the quasi-periodic and chaotic dynamics of dust ion acoustic waves are explored. Chaos detection tools confirm the presence of quasi-periodic and chaotic patterns using Basin of attraction, Lyapunov exponents, Fractal Dimension, Bifurcation diagram, Poincaré map, Time analysis, Multi-stability analysis, Chaotic attractor, Return map, Power spectrum, and 3D and 2D phase portraits. In addition, the model’s response to different initial conditions was examined through sensitivity analysis. Full article
(This article belongs to the Special Issue Trends in Dynamical Systems and Applied Mathematics)
Show Figures

Figure 1

18 pages, 7363 KiB  
Article
Agronomic Evaluation of Compost Formulations Based on Mining Tailings and Microbial Mats from Geothermal Sources
by María Jesús Puy-Alquiza, Miren Yosune Miranda Puy, Raúl Miranda-Avilés, Pooja Vinod Kshirsagar and Cristina Daniela Moncada Sanchez
Recycling 2025, 10(4), 156; https://doi.org/10.3390/recycling10040156 - 5 Aug 2025
Abstract
This study, conducted in Mexico, evaluates the agricultural potential of three compost formulations BFS1, BFS2, and BFS3 produced from mining tailings and thermophilic microbial mats and collected from geothermal environments. The physicochemical characterization included pH, electrical conductivity (EC), macronutrients (N, P, K, Ca, [...] Read more.
This study, conducted in Mexico, evaluates the agricultural potential of three compost formulations BFS1, BFS2, and BFS3 produced from mining tailings and thermophilic microbial mats and collected from geothermal environments. The physicochemical characterization included pH, electrical conductivity (EC), macronutrients (N, P, K, Ca, Mg, and S), micronutrients (Fe, Zn, B, Cu, Mn, Mo, and Ni), organic matter (OM), and the carbon-to-nitrogen (C/N) ratio. All composts exhibited neutral pH values (7.38–7.52), high OM content (38.5–48.4%), and optimal C/N ratios (10.5–13.9), indicating maturity and chemical stability. Nitrogen ranged from 19 to 21 kg·t−1, while potassium and calcium were present in concentrations beneficial for crop development. However, EC values (3.43–3.66 dS/m) and boron levels (>160 ppm) were moderately high, requiring caution in saline soils or with boron-sensitive crops. A semi-quantitative Compost Quality Index (CQI) ranked BFS3 highest due to elevated OM and potassium content, followed by BFS1. BFS2, while rich in nitrogen, scored lower due to excessive boron. One-way ANOVA revealed no significant difference in nitrogen (p > 0.05), but it did reveal significant differences in potassium (p < 0.01) and boron (p < 0.001) among formulations. These results confirm the potential of mining tailings—microbial mat composts are low-cost, nutrient-rich biofertilizers. They are suitable for field crops or as components in nursery substrates, particularly when EC and boron are managed through dilution. This study promotes the circular reuse of geothermal and industrial residues and contributes to sustainable soil restoration practices in mining-affected regions through innovative composting strategies. Full article
Show Figures

Figure 1

15 pages, 3579 KiB  
Article
Dual-Control-Gate Reconfigurable Ion-Sensitive Field-Effect Transistor with Nickel-Silicide Contacts for Adaptive and High-Sensitivity Chemical Sensing Beyond the Nernst Limit
by Seung-Jin Lee, Seung-Hyun Lee, Seung-Hwa Choi and Won-Ju Cho
Chemosensors 2025, 13(8), 281; https://doi.org/10.3390/chemosensors13080281 - 2 Aug 2025
Viewed by 176
Abstract
In this study, we propose a bidirectional chemical sensor platform based on a reconfigurable ion-sensitive field-effect transistor (R-ISFET) architecture. The device incorporates Ni-silicide Schottky barrier source/drain (S/D) contacts, enabling ambipolar conduction and bidirectional turn-on behavior for both p-type and n-type configurations. Channel polarity [...] Read more.
In this study, we propose a bidirectional chemical sensor platform based on a reconfigurable ion-sensitive field-effect transistor (R-ISFET) architecture. The device incorporates Ni-silicide Schottky barrier source/drain (S/D) contacts, enabling ambipolar conduction and bidirectional turn-on behavior for both p-type and n-type configurations. Channel polarity is dynamically controlled via the program gate (PG), while the control gate (CG) suppresses leakage current, enhancing operational stability and energy efficiency. A dual-control-gate (DCG) structure enhances capacitive coupling, enabling sensitivity beyond the Nernst limit without external amplification. The extended-gate (EG) architecture physically separates the transistor and sensing regions, improving durability and long-term reliability. Electrical characteristics were evaluated through transfer and output curves, and carrier transport mechanisms were analyzed using band diagrams. Sensor performance—including sensitivity, hysteresis, and drift—was assessed under various pH conditions and external noise up to 5 Vpp (i.e., peak-to-peak voltage). The n-type configuration exhibited high mobility and fast response, while the p-type configuration demonstrated excellent noise immunity and low drift. Both modes showed consistent sensitivity trends, confirming the feasibility of complementary sensing. These results indicate that the proposed R-ISFET sensor enables selective mode switching for high sensitivity and robust operation, offering strong potential for next-generation biosensing and chemical detection. Full article
(This article belongs to the Section Electrochemical Devices and Sensors)
Show Figures

Figure 1

16 pages, 3282 KiB  
Article
First-Principles Study on Periodic Pt2Fe Alloy Surface Models for Highly Efficient CO Poisoning Resistance
by Junmei Wang, Qingkun Tian, Harry E. Ruda, Li Chen, Maoyou Yang and Yujun Song
Nanomaterials 2025, 15(15), 1185; https://doi.org/10.3390/nano15151185 - 1 Aug 2025
Viewed by 192
Abstract
Surface and sub-surface atomic configurations are critical for catalysis as they host the active sites governing electrochemical processes. This study employs density functional theory (DFT) calculations and Monte Carlo simulations combined with the cluster-expansion approach to investigate atom distribution and Pt segregation in [...] Read more.
Surface and sub-surface atomic configurations are critical for catalysis as they host the active sites governing electrochemical processes. This study employs density functional theory (DFT) calculations and Monte Carlo simulations combined with the cluster-expansion approach to investigate atom distribution and Pt segregation in Pt-Fe alloys across varying Pt/Fe ratios. Our simulations reveal a strong tendency for Pt atoms to segregate to the surface layer while Fe atoms enrich the sub-surface region. Crucially, the calculations predict the stability of a periodic Pt2Fe alloy surface model, characterized by specific defect structures, at low platinum content and low annealing temperatures. Electronic structure analysis indicates that forming this Pt2Fe surface alloy lowers the d-band center of Pt atoms, weakening CO adsorption and thereby enhancing resistance to CO poisoning. Although defect-induced strains can modulate the d-band center, crystal orbital Hamilton population (COHP) analysis confirms that such strains generally strengthen Pt-CO interactions. Therefore, the theoretical design of Pt2Fe alloy surfaces and controlling defect density are predicted to be effective strategies for enhancing catalyst resistance to CO poisoning. This work highlights the advantages of periodic Pt2Fe surface models for anti-CO poisoning and provides computational guidance for designing efficient Pt-based electrocatalysts. Full article
(This article belongs to the Section Theory and Simulation of Nanostructures)
Show Figures

Figure 1

15 pages, 7392 KiB  
Article
Genetic Diversity and Population Structure of Tufted Deer (Elaphodus cephalophus) in Chongqing, China
by Fuli Wang, Chengzhong Yang, Yalin Xiong, Qian Xiang, Xiaojuan Cui and Jianjun Peng
Animals 2025, 15(15), 2254; https://doi.org/10.3390/ani15152254 - 31 Jul 2025
Viewed by 157
Abstract
The tufted deer (Elaphodus cephalophus), a Near-Threatened (NT) species endemic to China and Myanmar, requires robust genetic data for effective conservation. However, the genetic landscape of key populations, such as those in Chongqing, remains poorly understood. This study aimed to comprehensively [...] Read more.
The tufted deer (Elaphodus cephalophus), a Near-Threatened (NT) species endemic to China and Myanmar, requires robust genetic data for effective conservation. However, the genetic landscape of key populations, such as those in Chongqing, remains poorly understood. This study aimed to comprehensively evaluate the genetic diversity, population structure, gene flow, and demographic history of tufted deer across this critical region. We analyzed mitochondrial DNA (mtDNA) from 46 non-invasively collected fecal samples from three distinct populations: Jinfo Mountain (JF, n = 13), Simian Mountain (SM, n = 21), and the Northeastern Mountainous region (NEM, n = 12). Genetic variation was assessed using the cytochrome b (Cyt b) and D-loop regions, with analyses including Fst, gene flow (Nm), neutrality tests, and Bayesian Skyline Plots (BSP). Our results revealed the highest genetic diversity in the SM population, establishing it as a genetic hub. In contrast, the JF population exhibited the lowest diversity and significant genetic differentiation (>0.23) from the SM and NEM populations, indicating profound isolation. Gene flow was substantial between SM and NEM but severely restricted for the JF population. Demographic analyses, including BSP, indicated a long history of demographic stability followed by a significant expansion beginning in the Middle to Late Pleistocene. We conclude that the SM/NEM metapopulation serves as the genetic core for the species in this region, while the highly isolated JF population constitutes a distinct and vulnerable Management Unit (MU). This historical demographic expansion is likely linked to climatic and environmental changes during the Pleistocene, rather than recent anthropogenic factors. These findings underscore the urgent need for a dual conservation strategy: targeted management for the isolated JF population and the establishment of ecological corridors to connect the Jinfo Mountain and Simian Mountain populations, ensuring the long-term persistence of this unique species. Full article
(This article belongs to the Section Animal Genetics and Genomics)
Show Figures

Figure 1

23 pages, 3835 KiB  
Article
Computational Saturation Mutagenesis Reveals Pathogenic and Structural Impacts of Missense Mutations in Adducin Proteins
by Lennon Meléndez-Aranda, Jazmin Moreno Pereyda and Marina M. J. Romero-Prado
Genes 2025, 16(8), 916; https://doi.org/10.3390/genes16080916 - 30 Jul 2025
Viewed by 319
Abstract
Background and objectives: Adducins are cytoskeletal proteins essential for membrane stability, actin–spectrin network organization, and cell signaling. Mutations in the genes ADD1, ADD2, and ADD3 have been linked to hypertension, neurodevelopmental disorders, and cancer. However, no comprehensive in silico saturation [...] Read more.
Background and objectives: Adducins are cytoskeletal proteins essential for membrane stability, actin–spectrin network organization, and cell signaling. Mutations in the genes ADD1, ADD2, and ADD3 have been linked to hypertension, neurodevelopmental disorders, and cancer. However, no comprehensive in silico saturation mutagenesis study has systematically evaluated the pathogenic potential and structural consequences of all possible missense mutations in adducins. This study aimed to identify high-risk variants and their potential impact on protein stability and function. Methods: We performed computational saturation mutagenesis for all possible single amino acid substitutions across the adducin proteins family. Pathogenicity predictions were conducted using four independent tools: AlphaMissense, Rhapsody, PolyPhen-2, and PMut. Predictions were validated against UniProt-annotated pathogenic variants. Predictive performance was assessed using Cohen’s Kappa, sensitivity, and precision. Mutations with a prediction probability ≥ 0.8 were further analyzed for structural stability using mCSM, DynaMut2, MutPred2, and Missense3D, with particular focus on functionally relevant domains such as phosphorylation and calmodulin-binding sites. Results: PMut identified the highest number of pathogenic mutations, while PolyPhen-2 yielded more conservative predictions. Several high-risk mutations clustered in known regulatory and binding regions. Substitutions involving glycine were consistently among the most destabilizing due to increased backbone flexibility. Validated variants showed strong agreement across multiple tools, supporting the robustness of the analysis. Conclusions: This study highlights the utility of multi-tool bioinformatic strategies for comprehensive mutation profiling. The results provide a prioritized list of high-impact adducin variants for future experimental validation and offer insights into potential therapeutic targets for disorders involving ADD1, ADD2, and ADD3 mutations. Full article
(This article belongs to the Section Bioinformatics)
Show Figures

Graphical abstract

21 pages, 6310 KiB  
Article
Geological Evaluation of In-Situ Pyrolysis Development of Oil-Rich Coal in Tiaohu Mining Area, Santanghu Basin, Xinjiang, China
by Guangxiu Jing, Xiangquan Gao, Shuo Feng, Xin Li, Wenfeng Wang, Tianyin Zhang and Chenchen Li
Energies 2025, 18(15), 4034; https://doi.org/10.3390/en18154034 - 29 Jul 2025
Viewed by 188
Abstract
The applicability of the in-situ pyrolysis of oil-rich coal is highly dependent on regional geological conditions. In this study, six major geological factors and 19 key parameters influencing the in-situ pyrolysis of oil-rich coal were systematically identified. An analytic hierarchy process incorporating index [...] Read more.
The applicability of the in-situ pyrolysis of oil-rich coal is highly dependent on regional geological conditions. In this study, six major geological factors and 19 key parameters influencing the in-situ pyrolysis of oil-rich coal were systematically identified. An analytic hierarchy process incorporating index classification and quantification was employed in combination with the geological features of the Tiaohu mining area to establish a feasibility evaluation index system suitable for in-situ development in the study region. Among these factors, coal quality parameters (e.g., coal type, moisture content, volatile matter, ash yield), coal seam occurrence characteristics (e.g., seam thickness, burial depth, interburden frequency), and hydrogeological conditions (e.g., relative water inflow) primarily govern pyrolysis process stability. Surrounding rock properties (e.g., roof/floor lithology) and structural features (e.g., fault proximity) directly impact pyrolysis furnace sealing integrity, while environmental geological factors (e.g., hazardous element content in coal) determine environmental risk control effectiveness. Based on actual geological data from the Tiaohu mining area, the comprehensive weight of each index was determined. After calculation, the southwestern, central, and southeastern subregions of the mining area were identified as favorable zones for pyrolysis development. A constraint condition analysis was then conducted, accompanied by a one-vote veto index system, in which the thresholds were defined for coal seam thickness (≥1.5 m), burial depth (≥500 m), thickness variation coefficient (≤15%), fault proximity (≥200 m), tar yield (≥7%), high-pressure permeability (≥10 mD), and high-pressure porosity (≥15%). Following the exclusion of unqualified boreholes, three target zones for pyrolysis furnace deployment were ultimately selected. Full article
Show Figures

Figure 1

20 pages, 5790 KiB  
Article
Irrigation and Planting Density Effects on Apple–Peanut Intercropping System
by Feiyang Yu, Ruoshui Wang, Xueying Zhang, Huiying Zheng, Lisha Wang, Sanzheng Jin, Qingqing Ren, Bohao Zhang and Chaolong Xing
Agronomy 2025, 15(8), 1798; https://doi.org/10.3390/agronomy15081798 - 25 Jul 2025
Viewed by 310
Abstract
The western Shanxi Loess region, as a typical semi-arid ecologically fragile zone, faces severe soil and water resource constraints. The apple–peanut intercropping system can significantly improve water productivity and economic benefits through complementary resource utilization, representing an effective approach for sustainable agricultural development [...] Read more.
The western Shanxi Loess region, as a typical semi-arid ecologically fragile zone, faces severe soil and water resource constraints. The apple–peanut intercropping system can significantly improve water productivity and economic benefits through complementary resource utilization, representing an effective approach for sustainable agricultural development in the region. This study took the apple–peanut intercropping system as the research object (apple variety: ‘Yanfu 8’; peanut variety: ‘Huayu 38’), setting three peanut planting densities (D1: 27,500 plants/ha; D2: 18,333 plants/ha; D3: 10,833 plants/ha) and two water regulation measures—W1 (irrigation upper limit at 85% of field capacity, FC) and W2 (65% FC), with non-irrigated controls (CK) at different planting densities for comparison. This study systematically analyzed the synergistic regulation effects of intercropping density and water management on system water use and comprehensive benefits. Results showed that medium planting density combined with medium irrigation (W2D2 treatment) could maximize intercropping advantages, effectively improving the intercropping system’s soil water content (SWC), yield (GY), and water use efficiency (WUE). This research provides a theoretical basis for precision irrigation in fruit–crop intercropping systems in semi-arid regions. However, based on the significant water-saving and yield-increasing effects observed in the current experimental year, follow-up studies should verify its stability through multi-year fixed-position observation data. Full article
Show Figures

Figure 1

15 pages, 1823 KiB  
Article
Soil Texture’s Hidden Influence: Decoding Plant Diversity Patterns in Arid Ecosystems
by Shuaiyu Wang, Younian Wang, Zhiwei Li and Chengzhi Li
Soil Syst. 2025, 9(3), 84; https://doi.org/10.3390/soilsystems9030084 - 25 Jul 2025
Viewed by 340
Abstract
Desert plant communities play a vital role in sustaining the stability of arid ecosystems; however, they demonstrate limited resilience to environmental changes. A critical aspect of understanding community assembly mechanisms is determining whether soil texture heterogeneity affects vegetation diversity in arid deserts, especially [...] Read more.
Desert plant communities play a vital role in sustaining the stability of arid ecosystems; however, they demonstrate limited resilience to environmental changes. A critical aspect of understanding community assembly mechanisms is determining whether soil texture heterogeneity affects vegetation diversity in arid deserts, especially under conditions of extreme water scarcity and restricted nutrient availability. This study systematically examined the relationships between plant diversity and soil physicochemical properties across four soil texture types—sand, sandy loam, loamy sand, and silty loam—by selecting four representative desert systems in the Hami region of Xinjiang, China. The objective was to elucidate the mechanisms through which soil texture may impact desert plant species diversity. The findings revealed that silty loam exhibited distinct characteristics in comparison to the other three sandy soil types. Despite its higher nutrient content, silty loam demonstrated the lowest vegetation diversity. The Shannon–Wiener index (H′), Simpson dominance index (C), Margalef richness index (D), and Pielou evenness index (Jsw) for silty loam were all lower compared to those for sand, sandy loam, and loamy sand. However, silty loam exhibited higher values in electrical conductivity (EC), urease activity (SUR), and nutrient content, including soil organic matter (SOM), ammonium nitrogen (NH4+-N), and available potassium (AK), than the other three soil textures. This study underscores the significant regulatory influence of soil texture on plant diversity in arid environments, offering new insights and practical foundations for the conservation and management of desert ecosystems. Full article
Show Figures

Figure 1

14 pages, 2929 KiB  
Article
Synthesis and Electronic Properties of Novel Donor–π–Acceptor-Type Functional Dyes with a Carbonyl-Bridged Bithiophene π-Spacer
by Miyu Ueda, Ryo Nagayama, Masaki Nagaoka, Naoya Suzuki, Shintaro Kodama, Takeshi Maeda, Shin-ichiro Kato and Shigeyuki Yagi
Molecules 2025, 30(15), 3084; https://doi.org/10.3390/molecules30153084 - 23 Jul 2025
Viewed by 280
Abstract
In this study, we synthesized novel donor–π–acceptor (D–π–A) functional dyes bearing a carbonyl-bridged bithiophene as a π-conjugated spacer and evaluated the absorption and fluorescence properties as well as the photostability. The developed dyes 1-CO3-CO possess an N,N-diphenylaminophenyl electron [...] Read more.
In this study, we synthesized novel donor–π–acceptor (D–π–A) functional dyes bearing a carbonyl-bridged bithiophene as a π-conjugated spacer and evaluated the absorption and fluorescence properties as well as the photostability. The developed dyes 1-CO3-CO possess an N,N-diphenylaminophenyl electron donor unit and an electron acceptor unit such as a formyl group (1-CO), an (N,N-diethylthiobarbituryl)methylene moiety (2-CO), or a (3-dicyanomethylidene-1-indanon-2-yl)methylene moiety (3-CO). The absorption spectra of 1-CO3-CO in dichloromethane at room temperature showed absorption maxima at 569 nm, 631 nm, and 667 nm, respectively, and the stronger acceptors in 2-CO and 3-CO led to enhancement of the ICT character. In addition, 2-CO and 3-CO had a second absorption band in the visible region, showing panchromatic absorption properties. Electrochemical analyses of the developed dyes revealed that the carbonyl bridging group in the π-spacer contributes to stabilization of the frontier orbitals such as the highest occupied and lowest unoccupied molecular orbitals (HOMO and LUMO, respectively), in comparison with the referential dyes bearing a dibutylmethylene-bridged bithiophene spacer, 1-CBu23-CBu2. The HOMO/LUMO stabilization brought about high photostability in the doped poly(methyl methacrylate) film. Full article
(This article belongs to the Section Organic Chemistry)
Show Figures

Figure 1

Back to TopTop