Search Results (635)

Common bean (Phaseolus vulgaris L.) is a critical protein-rich legume supporting food and nutritional security globally. However, Fusarium wilt, caused by Fusarium solani, remains a major constraint to production, with yield losses reaching up to 84%. While biocontrol strategies have been explored, most microbial agents are sourced from mesophilic environments and show limited effectiveness under abiotic stress. Here, we report the isolation and characterization of extremophilic Bacillus spp. from the hypersaline Lake Bogoria, Kenya, and their biocontrol potential against F. solani. From 30 isolates obtained via serial dilution, 9 exhibited antagonistic activity in vitro, with mycelial inhibition ranging from 1.07–1.93 cm 16S rRNA sequencing revealed taxonomic diversity within the Bacillus genus, including unique extremotolerant strains. Molecular screening identified genes associated with the biosynthesis of antifungal metabolites such as 2,4-diacetylphloroglucinol, pyrrolnitrin, and hydrogen cyanide. Enzyme assays confirmed substantial production of chitinase (1.33–3160 U/mL) and chitosanase (10.62–28.33 mm), supporting a cell wall-targeted antagonism mechanism. In planta assays with the lead isolate (B7) significantly reduced disease incidence (8–35%) and wilt severity (1–5 affected plants), while enhancing root colonization under pathogen pressure. These findings demonstrate that extremophile-derived Bacillus spp. possess robust antifungal traits and highlight their potential as climate-resilient biocontrol agents for sustainable bean production in arid and semi-arid agroecosystems. Full article

Powdery mildew (PM), caused by Sphaerotheca phaseoli, severely threatens mungbean (Vigna radiata) productivity and quality, yet the molecular basis of resistance remains poorly defined. This study employed transcriptome profiling to compare defense responses in a resistant genotype, SUPER5, and a susceptible variety, CN84-1, following pathogen infection. A total of 1755 differentially expressed genes (DEGs) were identified, with SUPER5 exhibiting strong upregulation of genes encoding pathogenesis-related (PR) proteins, disease resistance proteins, and key transcription factors. Notably, genes involved in phenylpropanoid and flavonoid biosynthesis, pathways associated with antimicrobial compound and lignin production, were markedly induced in SUPER5. In contrast, CN84-1 showed limited activation of defense genes and downregulation of essential regulators such as MYB14. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses highlighted the involvement of plant–pathogen interaction pathways, MAPK signaling, and reactive oxygen species (ROS) detoxification in the resistant response. Quantitative real-time PCR validated 11 candidate genes, including PAL3, PR2, GSO1, MLO12, and P21, which function in pathogen recognition, signaling, the biosynthesis of antimicrobial metabolites, the production of defense proteins, defense regulation, and the reinforcement of the cell wall. Co-expression network analysis revealed three major gene modules linked to flavonoid metabolism, chitinase activity, and responses to both abiotic and biotic stresses. These findings offer valuable molecular insights for breeding PM-resistant mungbean varieties. Full article

In recent years, edible insects have gained significant attention as a sustainable and innovative source of feed for animal nutrition due to their excellent content of protein, fats, vitamins, and chitin. Among these, chitin is the least studied nutritional component, despite its promising properties and potential benefits. Chitin, an important polysaccharide found in the exoskeleton of arthropods, including insects, presents both negative and positive aspects in animal nutrition. As is known, the main drawback is its digestibility, which varies among livestock animal species depending on their ability to produce chitinase. However, chitin also exhibits benefits, including the enhancement of gut microbiota and immune response, together with the reduction in cholesterol and pathogen levels in animals. This review aims to summarise the current knowledge on the effects of chitin derived from edible insects on animal nutrition by analysing both the negative aspects and benefits for the different farmed animals for which insect feeding is legally permitted (fish, poultry, and pigs), while proposing future research directions. Full article

Plant pathogenesis-related (PR) proteins are a large and diverse family of proteins with antimicrobial activity, often induced by pathogen attack. Traditionally, PR proteins were thought to mainly participate in plant defense mechanisms against biotic stress. However, in recent years, increasing evidence has shown that these proteins also play important roles in the response to abiotic stress in plants. In the present review, we provide a summary of the latest findings on PR proteins and focus on their response to various abiotic stresses, the mechanism by which PR proteins are activated by external and internal signals, and their biological functions in plant responses to abiotic stresses. In addition, the existing challenges and future applications are also summarized, aiming to provide a reference for further research on PR proteins in the context of plant physiology. Full article

Rosa hybrida is a globally important ornamental species, but its economic and aesthetic value is often compromised by rose black spot disease (Diplocarpon rosae). Effective monitoring and early detection are essential for disease management. This study investigated physiological and biophysical responses to infection in a resistant cultivar (‘Carefree Wonder’) and a susceptible cultivar (‘Red Cap’) using electrical impedance spectroscopy (EIS), biochemical assays, and ultrastructural analysis. Key EIS parameters (r_i, r_e, τ), reducing sugar and free proline content, chitinase and β-1,3-glucanase activities, and chloroplast ultrastructure were monitored. The results showed that ‘Carefree Wonder’ had a higher initial EIS arc magnitude and osmolyte levels than ‘Red Cap’. Following infection, ‘Red Cap’ displayed earlier and more pronounced increases in EIS arc magnitude, while ‘Carefree Wonder’ responded more gradually. Reducing sugar and proline levels increased in both cultivars, with earlier accumulation in the resistant cultivar. Notably, extracellular resistivity (r_e) exhibited strong positive correlations with reducing sugar (R² = 0.479), free proline (R² = 0.399), chitinase (R² = 0.399), and β-1,3-glucanase activities (R² = 0.401). These findings highlight r_e as the most reliable EIS-derived indicator for early, non-destructive detection of rose black spot resistance. This study supports the potential of EIS for rapid disease diagnostics in rose breeding and cultivation. Full article

Plant-parasitic nematodes represent a significant threat to agriculture, causing substantial economic losses worldwide. Among the biological alternatives for their control, the genus Trichoderma has emerged as a promising solution for suppressing various nematode species. This article reviews key studies on the interaction between Trichoderma spp. and plant-parasitic nematodes, highlighting the most studied species such as Trichoderma harzianum, Trichoderma longibrachiatum, Trichoderma virens, and Trichoderma viride, mainly against the genera Meloidogyne, Pratylenchus, Globodera, and Heterodera. Trichoderma spp. act through mechanisms such as mycoparasitism, antibiosis, competition for space in the rhizosphere, production of lytic enzymes, and modulation of plant defense responses. They also produce metabolites that affect nematode mobility, reproduction, and survival, such as gliotoxin, viridin and cyclosporine A. In addition, they secrete enzymes such as chitinases, proteases, lipases, and glucanases, which degrade the cuticle of nematodes and their eggs. Furthermore, Trichoderma spp. induce systemic resistance in plants through modulation of phytohormones such as jasmonic acid, ethylene, salicylic acid and auxins. The use of Trichoderma in integrated nematode management enables its application in combination with crop rotation, organic amendments, plant extracts, and resistant varieties, thereby reducing the reliance on synthetic nematicides and promoting more sustainable and climate-resilient agriculture. Full article

Background and Objectives: This study aimed to investigate the relationship between Maresin-1 (MaR1), Chitinase-3-like protein 1 (CHI3L1), and inflammatory as well as hematological markers in patients with type 2 diabetes mellitus (T2DM) and diabetic nephropathy (DN). Materials and Methods: This cross-sectional study included 90 participants divided into three groups: healthy controls (n = 30), patients with T2DM (n = 30), and patients with diabetic nephropathy (n = 30). The serum levels of MaR1 and CHI3L1 were measured using ELISA. Biochemical and hematological parameters were also assessed. Statistical comparisons were conducted using non-parametric tests, and correlations were analyzed via Spearman correlation. Results: Serum MaR1 levels were significantly higher in DN patients compared to both T2DM patients and controls (p < 0.01), while CHI3L1 levels were significantly lower in the DN group compared to controls (p = 0.007). MaR1 showed a positive correlation with CRP, BUN, and creatinine, and a negative correlation with GFR. CHI3L1 levels were positively correlated with GFR and negatively with BUN. Inflammatory markers such as CRP were elevated in the diabetic groups, while no significant differences were found in NLR values. Conclusions: Elevated MaR1 levels in DN patients and their correlation with renal dysfunction markers suggest that MaR1 may serve as a potential prognostic biomarker in diabetic nephropathy. The unexpected decrease in CHI3L1 levels in DN patients indicates the need for further research to clarify their role. These findings indicated that MaR1 and CHI3L1 should be further investigated in future studies as indicators for the early detection and monitoring of diabetic complications. Full article

Proteins play pivotal roles in safeguarding plants against numerous biotic and abiotic stresses. Understanding their biological functions and mechanisms of action is essential for advancing plant biology, agriculture, and biotechnology. This review considers the diversity and potential applications of plant defense proteins including pathogenesis-related (PR) proteins, chitinases, glucanases, protease inhibitors, lectins, and antimicrobial peptides. Recent advances, such as the omics technologies, have enabled the discovery of new plant defense proteins and regulatory networks that govern plant defense responses and unveiled numerous roles of plant defense proteins in stress perception, signal transduction, and immune priming. The molecular affinities and enzymatic activities of plant defense proteins are essential for their defense functions. Applications of plant defense proteins span agriculture, biotechnology, and medicine, including the development of resistant crop varieties, bio-based products, biopharmaceuticals, and functional foods. Future research directions include elucidating the structural bases of defense protein functions, exploring protein interactions with ligands and other proteins, and engineering defense proteins for enhanced efficacy. Overall, this review illuminates the significance of plant defense proteins against biotic stresses in plant biology and biotechnology, emphasizing their potential for sustainable agriculture and environmental management. Full article

Colletotrichum capsici is an important pathogen causing anthracnose in postharvest peppers in parts of Asia, seriously compromising quality and storage life. Unveiling the pathogenic mechanism can better prevent postharvest disease in pepper. This study investigated the impacts of C. capsici infection on cell wall and phenylpropanoid metabolism in postharvest pepper. Compared to the non-inoculated peppers, C. capsici infection notably increased the disease index, damaged visual quality, and reduced the firmness. Morphological observations showed that C. capsici infection contributed to the collapse of epidermal cell structure. During the early stage, C. capsici triggered pepper’s defensive responses, including lignin deposition around the wounds, increased cellulose and hemicellulose content, and boosted disease-resistance enzymes, including phenylalanine ammonia-lyase (PAL), cinnamic acid 4-hydroxylase (C4H), 4-coumarate-CoA ligase (4CL), cinnamyl alcohol dehydrogenase (CAD), laccase (LAC), β-1,3-glucanase (β-1,3-Glu), and chitinase (CHI), alongside elevated total phenolics and flavonoids. However, as storage time progressed, the activities of carboxymethy cellulase (Cx), polygalacturonase (PG), pectin methylesterase (PME), and β-glucosidase (β-Glu) remained at a high level, leading to a reduction in cell wall components, a decline in the activities of disease-resistance enzymes, and a decrease in phenylpropanoid metabolite, resulting from disease progression in pepper. These insights highlight the need for early intervention strategies to mitigate postharvest losses by targeting pathogen-induced stress responses and cell wall integrity preservation. Full article

The market value of litchi fruit is declining quickly due to its susceptibility to disease and rapid pericarp browning. Slightly acidic electrolyzed water (SAEW) treatment is recognized as a safe disinfection technology that not only preserves the quality of postharvest produce, but also enhances disease resistance. This study assessed the efficacy of SAEW in preserving litchi fruit and boosting its resistance to disease. Litchi fruit underwent treatment with SAEW at various available chlorine concentrations (ACC) (10, 25, 50, and 75 mg/L) and subsequently stored at 25 °C for a duration of six days. The results revealed that SAEW with an ACC of 25 mg/L markedly improved the postharvest quality of litchi fruits, reduced disease incidence, and enhanced the appearance of the pericarp and nutrient levels in the arils. Additionally, this treatment enhanced the levels of disease resistance-related compounds, including lignin, flavonoids, and total phenolics, in the pericarp of litchis during the later storage stages (p < 0.05). Furthermore, in the final three days of storage, there were also noticeable increases (p < 0.01) in the activities of pericarp disease resistance enzymes (DREs), such as phenylalanine ammonialyase, cinnamate-4-hydroxylase, 4-coumarate CoA ligase, cinnamyl alcohol dehydrogenase, peroxidase, polyphenol oxidase, chitinase, and β-1,3-glucanase. Based on these results, it was concluded that SAEW triggered DRE activities and increased the accumulation of disease resistance-related compounds by regulating the phenylpropane pathway to suppress disease development, and elevated the storage quality of harvested litchi fruit. Consequently, SAEW has proven to be an effective and safe method for enhancing the storability of litchi fruit. Full article

Moniliophthora roreri (MR, frosty pod rot) and M. perniciosa (MP, witches’ broom disease) pose critical threats to cacao production in Latin America. This study explores the biocontrol potential of Trichoderma spp. strains against these pathogens through exploratory analysis of mycoparasitism, chitinolytic activity, and volatile organic compound (VOC) production. Dual-culture assays revealed species-specific antagonism, but C2A/C4B showed a dual-pathogen efficacy (>93% of Monioliopthora inhibition). Chitinase activity revealed C4A/C1 strains as exceptional producers (72 mg/mL NAGA vs. MR and 94 mg/mL vs. MP, respectively). GC-MS analysis identified pathogen-modulated VOC dynamics: hexadecanoic acid dominated in 80% Trichoderma solo-cultures (up to 26.65% peak area in C3B). MP showed 18.4-fold higher abundance of hexadecanoic acid than MR (0.23%). In 90% of dual-culture with MR and MP, HDA was detected as the most abundant. Functional specialization was evident. C4A and C1 prioritized chitinase production growing on MR and MP cell walls (respectively), whereas C9 excelled in antifungal hexadecanoic acid synthesis in confrontation with both pathogens. Complementary strengths among strains—enzymatic activity in C4A/C4B versus volatile-mediated inhibition in C9—suggest niche partitioning, supporting a consortium-based approach for robust biocontrol. This study provides preliminary evidence for the biocontrol potential of several Trichoderma strains, showing possible complementary modes of action. Full article

Among the molecules implicated in inflammation-associated tumorigenesis, Chitinase 3-like 1 (CHI3L1/YKL-40/Brp-39) has emerged as a particularly compelling target due to its multifaced roles in immune regulation, tissue remodeling, and cancer progression. Elevated CHI3L1 expression is observed in various human cancers and corresponding animal models. CHI3L1 directly promotes tumor cell proliferation and angiogenesis and also contributes to immune evasion by establishing an immunosuppressive environment in inflamed tissues. Mechanistically, CHI3L1 exerts its effects through the modulation of STAT3, MAPK, and PI3K/Akt signaling pathways and by interacting with cell surface receptors, such as IL-13Rα2 and RAGE. Studies using transgenic and knockout mouse models have revealed a strong association between CHI3L1 expression and cancer progression. In models of colon and lung cancer, CHI3L1 overexpression correlates with increased tumor size and number, whereas CHI3L1 deficiency markedly suppresses tumor formation. However, its involvement appears to be context-dependent and varies among different epithelial tumor types. These findings suggest that CHI3L1 is a potential therapeutic target and diagnostic biomarker for inflammation-associated cancers. Animal studies provide valuable insights into the immunological mechanisms of CHI3L1-mediated tumorigenesis but also highlight the need for cautious interpretation due to inherent technical limitations. Full article

Bradysia difformis Frey (Diptera: Sciaridae) is a fungus gnat that poses a significant threat to greenhouse cultures, and is attracted to soils devoid of peat. Fungal strains from the German Collection of Microorganisms and Cell Culture (DSMZ), such as Beauveria bassiana, Metarhizium flavoviride, Mucor hiemalis, and Niesslia tinuis, as well as Serendipita indica, were screened for entomopathogenic activity against B. difformis and their capacity to colonize Petunia hybrida cv. “Mitchell” and Ocimum basilicum plants. The survival rates of Bradysia difformis (three instar larvae) treated with Metarhizium flavoviride were 45.33% at 14 days following inoculation with 1 × 10⁶ spores/mL of each fungal strain, when compared to others. We concluded that the fungal strain M. flavoviride could serve as an entomopathogenic fungus with the highest virulence against B. difformis larvae. Although M. flavoviride did not show a beneficial effect as an endophyte, interestingly, the strain Niesslia tinuis exhibited plant growth benefits in Petunia hybrida cv. “Mitchell” by enhancing its shoot length up to 13.18 ± 0.72 cm, whereas the control treatment had a shoot length up to 10.68 ± 0.39. Enzymatic assays confirmed the ability of M. flavoviride to produce cuticle-degrading enzymes such as chitinase and protease. Together, these findings highlight the potential of EMPF—particularly M. flavoviride—as a sustainable biocontrol tool well-suited for peat-free horticultural systems, offering an eco-friendly alternative to chemical insecticides where fungus gnat pressure is typically high. Full article

Background: Abdominal aortic aneurysm (AAA) is a chronic inflammatory disease characterized by the proteolytic breakdown of the extracellular matrix. A clinical biomarker is needed for risk stratification and prognosis. Methods: In this single-center, 5-year observational study, 452 patients were enrolled: 343 with AAA (≥3 cm), and 109 controls (<3 cm). Plasma levels of six inflammatory proteins (human epididymis protein 4 (HE4), matrix metalloproteinase (MMP) 1 and 3, cathepsin S, chitinase 3 like-1, cathepsin S, and B-cell activating factor (BAFF)) were quantified at baseline. Patients were followed for a total of 5 years (60 months), and major adverse cardiovascular events (MACEs, defined as the composite of myocardial infarction, cerebrovascular attack, and cardiovascular-related death) were recorded. A Cox proportional hazard model was created using biomarker levels, age, sex, hypertension, hypercholesterolemia, diabetes mellitus, smoking status, and coronary artery disease to determine whether the baseline levels of these proteins were associated with MACEs over 5 years. Results: HE4, MMP-3, BAFF, and cathepsin S levels were significantly elevated in AAA patients compared to controls (all p < 0.05). HE4/WFDC2, MMP-3, and Chitinase 3-like 1 were significantly linearly associated with AAA diameter at baseline. With every normalized unit increase in HE4/WFDC2, MMP-3, and Chitinase 3-like 1, there was an increase in abdominal aortic diameter by 0.154 (95% CI: 0.032–0.276, p = 0.013), 0.186 (95% CI: 0.064–0.309, p = 0.003), and 0.231 (0.110–0.353, p < 0.001) centimeters, respectively. Among patients with AAA, elevated HE4 was associated with higher risk of MACEs (adjusted HR 1.249; 95% CI: 1.057–1.476; p = 0.009). Patients with high baseline HE4 (≥9.338 ng/mL) had significantly lower freedom from MACEs at 5 years (76.7% vs. 84.8%, p = 0.022). Conclusions: HE4 may be a potential prognostic biomarker that can be used to risk stratify patients with AAA to better personalize treatment strategies to reduce adverse events. Full article

The purpose of this study was to investigate the growth-promoting effects of four rhizobacterial isolates (RS60, RS65, RS46, and RP6) isolated from the tomato rhizosphere. These isolates were screened for key plant growth-promoting rhizobacteria (PGPR) mechanisms, including ammonia production, nitrogen fixation, phosphate solubilization, indole-3-acetic acid (IAA) production, and siderophore synthesis. Their potential to enhance seed germination and tomato plant growth was investigated in controlled and greenhouse conditions. Four isolates exhibited multiple PGPR attributes, notably IAA and ammonia production as well as phosphate solubilization. The results revealed that these strains significantly enhanced tomato seed germination and shoot growth in vitro, with RS65 showing the highest germination rate (70%). However, no significant differences in early seedling responses were observed under greenhouse conditions when compared to the control. Thirty days after inoculation, greenhouse results revealed that the four studied strains significantly increased growth metrics including shoot length, number of leaves, collar diameter, and dry weight. The isolate RP6 showed a significant effect on the growth of the plant, with an average shoot length of 34.40 cm and nine leaves per plant. In vitro antagonism assays demonstrated that isolates RS60, RS65, and RP6 effectively inhibited the growth of Botrytis cinerea, Alternaria alternata, and Oidium lycopersici, with inhibition rates exceeding 65%. These antagonistic activities were linked to the production of hydrolytic enzymes (chitinase, cellulase, pectinase, protease), siderophores, and hydrogen cyanide (HCN). Molecular identification through 16S rRNA gene sequencing confirmed the isolates as Bacillus cereus (RS60), Bacillus pumilus (RS46), Bacillus amyloliquefaciens (RP6), and Bacillus velezensis (RS65), each showing over 97% sequence similarity with reference strains. These findings underscore the potential of the selected Bacillus spp. as promising biofertilizers and biocontrol agents for sustainable tomato cultivation and support their inclusion in integrated disease and nutrient management strategies. Full article