International Journal of Plant Biology doi: 10.3390/ijpb17080070

Authors: Prabhaharan Renganathan Kristina Borisovna Ukhatkina Makhmutov Almaz Ilya Isidorovich Van Erp Lira A. Gaysina

Commercial seaweed extracts (SWEs) are widely used as plant biostimulants; however, information on formulation-specific optimum dosages for greenhouse-grown Capsicum annuum seedlings is limited. This study evaluated the effects of five commercial SWE formulations applied at five dosages (1–5 mL L−1) on seedling growth, biomass accumulation, and root growth under greenhouse conditions. Morphological traits, biomass characteristics, and growth efficiency indices were assessed using univariate and multivariate statistical approaches to identify formulation-specific optimum application rates. Commercial SWE application significantly (p < 0.05) increased chlorophyll content, shoot and root growth, and fresh biomass, although the magnitude of the response varied among the formulations and application rates. The optimum dosages identified by the Technique for Order Preference by Similarity to Ideal Solution (TOPSIS) were ASCO at 2 mL L−1, AQUA at 3 mL L−1, BIO at 2 mL L−1, KAT at 3 mL L−1, and SAGA at 3 mL L−1. Principal component and Pearson correlation analyses further demonstrated coordinated improvements across multiple growth traits. These findings demonstrate that optimum seedling performance depends on formulation-specific rather than universal application rates. The identified optimum dosages provide practical guidance for selecting commercial seaweed biostimulant application rates in greenhouse C. annuum nurseries.

International Journal of Plant Biology doi: 10.3390/ijpb17080069

Authors: Said Bahoch Salahddine Chafiki Soumaya El Assri Abdessamad Elaasri Rachid Elaini Fouad Elame Ahmed Wifaya Mohamed Ouknin El Hassan Mayad Rachid Bouharroud Redouan Qessaoui

The two-spotted spider mite, Tetranychus urticae Koch, is a highly polyphagous and economically important pest affecting a wide range of crops worldwide. This study evaluated the potential of four rhizobacterial isolates—Leucobacter aridicollis (IQR1), Paenochrobactrum sp. (IQR2), uncultured bacterium IQR3, and marine bacterium AK6_052 (IQR5)—as candidate biological control agents against T. urticae. The rhizobacterial isolates were obtained from the tomato rhizosphere at the INRA experimental farm (Agadir, Morocco) and evaluated for their acaricidal and repellent activities against T. urticae. Corrected mortality and repellency index were assessed after 24, 48, and 72 h of exposure. All four isolates exhibited acaricidal activity, with IQR3 and IQR5 showing the greatest efficacy. Corrected mortality reached 69.9% with IQR3 at the highest concentration after 72 h of exposure. The isolates showed no statistically significant repellent activity. Under greenhouse conditions (108 CFU mL−1), IQR3 was associated with the lowest infestation incidence (64%), the lowest infestation severity (13.3%) and the lowest adult density (1.8 adults leaf−1); IQR5 showed a comparable trend. Overall, IQR3 and IQR5 represent promising rhizobacterial candidates for the sustainable management of T. urticae in tomato production. Further studies are needed to optimize their formulation, elucidate their mechanisms of action, and validate their efficacy under field conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17080068

Authors: Kornkanok Chamchusri Bhornchai Harakotr Panumart Rithichai Yaowapha Jirakiattikul

Knowledge of pollen viability, pollen longevity, and stigma receptivity in Zephyranthes remains limited despite their importance for successful hybridization. Therefore, this study evaluated these reproductive traits in four Zephyranthes species (Z. traubii, Z. candida, Z. grandiflora, and Z. citrina) and one cultivar, ‘Pim Chomphu’, to provide baseline reproductive information for controlled pollination. Pollen viability was evaluated using tetrazolium staining at different collection times and storage conditions, whereas stigma receptivity was assessed using 6% hydrogen peroxide (H2O2), with reproductive outcomes following controlled self-pollination evaluated at the corresponding time points. Tetrazolium-based pollen viability exhibited taxon-specific temporal patterns; however, viability was generally high at 11:00, corresponding to 1 day after anthesis (1 DAA) in Z. traubii and the day of anthesis (0 DAA) in the remaining taxa. The combined protocol of desiccation followed by storage at −5 °C or −20 °C maintained tetrazolium-based pollen viability for up to 120 days. Although all taxa showed positive H2O2-based stigma responses across the evaluated time points, reproductive outcomes following self-pollination differed markedly among taxa. Z. citrina set fruit at all pollination times, whereas Z. candida failed to set fruit. The remaining taxa showed variable fruit set and seed germination depending on pollination timing. These results indicate that positive H2O2-based stigma responses should be interpreted as biochemical indicators of potential stigma receptivity and considered together with subsequent reproductive outcomes. These findings provide baseline reproductive information to support pollen management and controlled pollination in Zephyranthes.

International Journal of Plant Biology doi: 10.3390/ijpb17080067

Authors: Aidyn Orazov Talant Samarkhanov Anar Myrzagaliyeva Moldir Yermagambetova Sultan Kauanov Yerlan Turuspekov Serik Irsaliyev Shynar Tustubayeva Bauyrzhan Turalin

Wild almond relatives are valuable reservoirs of allelic variation for crop improvement and conservation, yet Kazakhstan’s wild-almond genetic resources remain poorly characterised. We conducted an exploratory SSR assessment of 80 putative individuals from four taxon-locality groups (20 per group), each representing one sampled population: Prunus ledebouriana, P. tenella, P. petunnikowii, and P. spinosissima. Of 22 nuclear simple sequence repeat loci screened for cross-taxon transferability, 15 generated reproducible profiles and were retained; their even genome-wide distribution was not verified. Across the full dataset, the mean number of alleles was 3.55, the effective number of alleles was 2.62, expected heterozygosity (He) was 0.544, and 95.0% of loci were polymorphic. Missing genotypes ranged from 0.0% to 34.7% among groups, and six loci had at least 20% missing data. AMOVA attributed 76.5% of variation to within-group differences and 23.5% to among-group differences (PhiPT = 0.235, p = 0.001). PCoA, unbiased Nei distances, UPGMA, and descriptive Bayesian clustering separated the four sampled groups. A nine-locus sensitivity analysis that excluded the six high-missing loci retained P. spinosissima as the group with the highest mean He (0.699), whereas P. petunnikowii increased from 0.471 to 0.609. Thus, the low full-panel estimate for P. petunnikowii was not robust to missing data. Because taxon identity was fully confounded with locality and the marker panel was limited, the results are interpreted as a regional marker-transferability and methodological baseline rather than as species-wide or genome-wide inference.

International Journal of Plant Biology doi: 10.3390/ijpb17080066

Authors: Mauricio Mateus Guimaraes-Silva Matheus Chaves de Jesus Dannily Augusto Rebouças Lorraynne Oliveira-Souza Abreu Claudete da Costa-Oliveira Elaine de Lima de Jesus Orlando Maia Barboza Tamara do Nascimento da Silva Philippe Barreto de Almeida Renato Crespo Pereira Davyson de Lima Moreira Ygor Jessé Ramos

Plant chemical diversity constitutes an essential dimension of biodiversity, arising from interactions among genetic background, biosynthetic regulation, the environment, ontogeny, ecology, and evolutionary history. Although the term chemotype is widely used for distinguishable chemical patterns within a taxon, its meaning remains inconsistent across plant biology, phytochemistry, pharmacognosy, chemical ecology, and natural-product standardization. This conceptual review examines the historical development, conceptual boundaries, chemical criteria, biological significance, and methodological requirements of plant chemotypes. We define a chemotype as a distinguishable, recurrent, relatively stable, analytically reproducible, and biologically interpretable intraspecific chemical pattern expressed by individuals, populations, or lineages of the same taxon. Assignment should be based primarily on chemical discontinuity, diagnostic markers, recurrence, relative stability, and analytical reproducibility; ecological, functional, biosynthetic, and genetic information should be treated as supporting evidence when available. The framework applies to volatile and non-volatile systems, including essential oils, cannabinoids, alkaloids, phenolics, and glucosinolates, while recognizing that platform coverage, annotation confidence, and taxon-specific biology can alter the inferred groups. We distinguish chemotypes from chemical phenotypes, chemical ecotypes, chemical geotypes, chronotypes, chemovars, and chemophenetic groups and propose three evidence levels: putative, supported, and confirmed chemotypes.

International Journal of Plant Biology doi: 10.3390/ijpb17080065

Authors: Aisulu Orken Nurbek Zhumabay Nazerke Amangeldyeva Malika Ramazanova Sabir Makhmadjanov Laura Tokhetova Shuga Manabayeva Dilnur Tussipkan

In arid and semi-arid regions, salinity and drought limit cotton productivity. As the northernmost cotton-growing country, Kazakhstan often deals with these issues. The objective of this study was to classify salt- and drought-tolerant groups within the Kazakhstan cotton collection based on key phenotypic traits. Fifty-six Gossypium hirsutum genotypes were evaluated under controlled conditions using NaCl and PEG-6000. Six morphophysiological traits, including germination rate, plant height, fresh weight, root dry weight, and relative water content, were analyzed. Increasing NaCl and PEG levels reduced vegetative growth, while germination remained relatively stable under moderate stress. Regression analysis identified 200 mM NaCl as the optimal salinity level for salt tolerance and 20–30% PEG as the optimal level for drought tolerance. Cluster analysis using membership function values grouped the genotypes into five tolerance categories. Eight lines including M-4016-6, M-4031-8, M-4014-6, M-4029-9, M-4016-7, M-4016-8, M-4020-2, and M-4016-4 exhibited high tolerance to both stresses. Additional lines exhibited combined tolerance, indicating strong breeding potential. Principal component analysis revealed an inverse relationship between salt and drought tolerance, suggesting stress-specific adaptation. This study is the first to report on the development of a classification system for salt and drought tolerance in the Kazakhstan Cotton Collection. The results demonstrate substantial genetic variability and highlight the potential for developing cotton cultivars adapted environments prone to stress.

International Journal of Plant Biology doi: 10.3390/ijpb17080064

Authors: Hiju Yoo Samuel Lee Young Jin Choi Yeong Sunwoo Jeong Geun Lee Siyeon Yoo Ji Min Seo Sunyoung Lee Gyurim Kim Eun Bin Cha Sang Yong Nam Jae Hwan Lee

Sorrel (Rumex acetosa L.) is a promising leafy vegetable for controlled-environment production, but integrated information on its growth, structural quality, optical traits, and photochemical responses to light-emitting diode (LED) spectra remains limited. To our knowledge, this study provides the first systematic comparison of five contrasting LED spectral conditions in sorrel using morphological, biomass, structural-quality, reflectance-based, and chlorophyll-fluorescence indicators. Plants were grown for six weeks under red light (RL), green light (GL), blue light (BL), purple-phyto light (PL) containing red, blue, and far-red components, or white light (WL) at a color temperature of 6500 K. Sorrel responses differed markedly among spectral environments and could not be explained by a single growth parameter. WL produced the highest mean shoot dry weight (505 mg), which was approximately 30.5% higher than that under PL (387 mg), although the difference between the two treatments was not statistically significant. WL also produced 46.5% greater leaf area than PL (50.1 versus 34.2 cm2) and showed the highest mean PIABS value (4.00). In contrast, PL showed the highest mean root dry weight (25.5 mg) and Dickson quality index (9.4), together with a relatively low shoot-to-root ratio (17.7) and top-heavy index (20.0), indicating a less shoot-biased structural pattern. BL restricted growth and leaf development and was associated with lower soil plant analysis development units, normalized difference vegetation index, photochemical reflectance index, Fv/Fm, and PIABS, indicating that BL alone may have limited suitability for sorrel cultivation under the present experimental conditions. Under the tested conditions, WL appeared more suitable for yield-oriented production, whereas PL may be considered when shoot–root structural balance is prioritized.

International Journal of Plant Biology doi: 10.3390/ijpb17080063

Authors: Lucía Vásquez-Hernández Galo Pabón-Garcés

Opuntia ficus-indica (L.) Mill. is a crassulacean acid metabolism (CAM) xerophyte whose intraspecific morphological diversity remains poorly documented in Andean agroecosystems. This study characterized the phenotypic diversity of 55 accessions collected along an altitudinal gradient in the dry inter-Andean valleys of northern Ecuador. Twenty morphological descriptors were used to analyse the data. Quantitative descriptors showed moderate to high variability, with reproductive and defensive characters exhibiting greater variation than vegetative descriptors. MCA revealed substantial chromatic diversity, with fruit peel and pulp color emerging as the strongest qualitative discriminators among morphotypes. Cluster analysis identified three statistically distinct groups: a small-fruited, highly spinescent morphotype restricted to the most arid sites; an intermediate and phenotypically diverse morphotype distributed across all provinces; and a large-fruited, low-spinescence morphotype with the highest seed numbers, consistent with a more advanced domestication trajectory. The primary differentiation axis reflected a trade-off between spine investment and reproductive output. Five discriminant descriptors—fruit weight, spine length, seed number, peel color, and pulp color—provide a robust baseline for germplasm characterization and support conservation, breeding, and nutraceutical valorization in Andean drylands. The findings of this research contribute to filling a critical knowledge gap regarding Andean cactus pear germplasm, providing a scientific basis for conservation, sustainable management, and future breeding and agro-industrial initiatives.

International Journal of Plant Biology doi: 10.3390/ijpb17080062

Authors: Risky Mulana Anur Muslimah Arniyanti Intan Ria Neliana Bambang Sugiharto Wahyu Indra Duwi Fanata Tri Handoyo Parawita Dewanti

Water deficit is one of the most critical factors for determining the growth and yield of sugarcane. Understanding the physiological and molecular mechanisms of sugarcane responses is essential for developing resilient cultivars. In this study, three sugarcane cultivars, NX04 (sensitive), BL (moderate), and NXI-4T (tolerant), were grown in a greenhouse for 2 months and then subjected to drought stress for 8 days after planting. Morphological variation showed that the tolerant sugarcane cultivar exhibits a longer root system and delays leaf chlorosis and rolling. Malondialdehyde (MDA) content was increased in the sensitive and moderate cultivars, although it slightly increased in the tolerant cultivars at 8 days after drought stress. The increase was accompanied by increases in proline content and in gene expression of the catalase (Cat) and ascorbate peroxidase (Apx) across all cultivars, which protect cells from oxidative damage. Interestingly, the expression of the photosynthetic Pepc (phosphoenolpyruvate carboxylase) and Sps (sucrose-phosphate synthase) genes was significantly decreased, whereas SPS activity increased under drought stress. This implies that the SPS protein may be regulated through post-translational modification. The expression of transcription factors (TFs) of NAC, rather than DREB, was significantly upregulated in the tolerant cultivar under 8 days of drought stress, in line with the delay of chlorosis.

International Journal of Plant Biology doi: 10.3390/ijpb17080061

Authors: Safouane Benjaa Rachid Bouharroud Salahddine Chafiki Soumaya El Assri Abdelmalek Mahroug Ahmed Wifaya My Abdelmajid Kassem Redouan Qessaoui

Pathogenic strains of Fusarium oxysporum are major soilborne fungal pathogens responsible for Fusarium wilt in tomato, leading to significant yield losses worldwide. This study evaluated the biocontrol potential of rhizospheric bacterial isolates from argan (Argania spinosa) and raspberry (Rubus idaeus) soils through an integrated approach combining in vitro screening, greenhouse validation, and phylogenetic analysis. A total of 27 bacterial isolates were screened for antifungal activity using dual culture assays, of which ten exhibited more than 50% inhibition of fungal growth. Selected isolates were further evaluated for volatile organic compound (VOC)-mediated inhibition. Despite strong in vitro performance for several isolates, greenhouse experiments revealed that antifungal activity in vitro was not a reliable predictor of in planta efficacy. Among the tested isolates, BSA25, BSA23, and BSF8 significantly reduced disease severity and incidence under greenhouse conditions, with BSA25 achieving the greatest suppression. In addition to disease control, certain isolates promoted plant growth under pathogen stress, indicating dual functionality as plant growth-promoting rhizobacteria (PGPR). Molecular identification based on 16S rRNA gene sequencing and phylogenetic analysis (Neighbor-Joining, Kimura 2-parameter) revealed that the isolates belong to PGPR-associated genera, including Bacillus and Pseudomonas, while also highlighting functional variability among closely related taxa. Overall, this study demonstrates that multi-trait evaluation, integrating mechanistic screening and in planta validation, provides a more reliable framework for selecting effective biocontrol agents. The identified isolates, particularly BSA25, represent promising candidates for further evaluation for sustainable management of Fusarium wilt in tomato production systems.

International Journal of Plant Biology doi: 10.3390/ijpb17080060

Authors: Mariam Kiebre Jacques Ouedraogo Ignace Tondé Jocelyne Wendpingrenoma Ouangraoua Clémence Zerbo Zakaria Kiebre Romaric Kiswendsida Nanema Fanta Reine Sheirita Tietiambou Hamid El Bilali Filippo Acasto Jacques Nanema

Effective utilization of plant genetic resources requires agro-morphological evaluation of collections across diverse growing regions. The objectives of this study are to assess genetic diversity and estimate genetic parameters through morphological traits of Bambara groundnut. The study was conducted over two growing seasons at the SUSTLIVES project site in Gampela (Central Burkina Faso) using an RCBD with three replicates. A total of eight qualitative and eight quantitative traits were used to estimate variability within a collection of 153 landraces. The results revealed a substantial variability in all the qualitative traits, with the number of modalities ranging from 2 to 10, seed color being the variable trait. Based on qualitative traits related to seed, the landraces were grouped into 12 morpho-groups. The analysis of variance showed the presence of significant variation between landraces and across years and their interactions for all of the quantitative traits. The heritability values ranged from 46.12% (seed weight per plant) to 88.66% (days to 90% maturity). The landraces KKou4, KKou2, ODap3, ODap4, KLay68, BPle2, KTog6, KSag11, ZMag4 and ODap1 were identified as high-yielding landraces. Future selection efforts for Bambara groundnut should therefore continue to evaluate the genotypes that have a high potential for grain yield under various pedoclimatic environments of the country.

International Journal of Plant Biology doi: 10.3390/ijpb17070059

Authors: Akzhunis Imanbayeva Nurzhaugan Duisenova Nazerke Tolep Aidyn Orazov Ainur Tuyakova Akimzhan Lukmanov

The reliable identification of cultivated and naturalised mulberries is complicated by morphological plasticity, the historical movement of the planting material, and partly discordant nuclear and plastid signals. We evaluated four field-identified Morus alba L. trees, one from each of four localities in Mangystau, Western Kazakhstan, using archived consensus sequences for ITS, matK, rbcL, and trnH-psbA, together with a low-coverage Oxford Nanopore Technologies (ONT) dataset. Because the design comprised one tree per locality (n = 4), analyses were restricted to accession-level descriptive comparisons, and no population-genetic, phylogeographic, or formal phylogenetic inference was attempted. Archived alignment summaries indicated mean pairwise distances of 0.13% for matK, 0.44% for ITS, 0.94% for rbcL, and 2.92% for trnH-psbA; these values are reported as retained dataset descriptors rather than estimates of population diversity. An additional product generated with Rosaceae-derived s6pdh primers was excluded because the target identity and orthology could not be verified. The ONT run yielded 19,958 pass reads (69.27 Mb; read N50 3574 bp). Reference-enriched assembly produced a 14,824 bp candidate plastid-associated contig, approximately 9.3% of a typical Morus plastome. Its short length, incomplete and non-collinear annotations, and the absence of retained depth, polishing, assembly graph, and join support diagnostics preclude its interpretation as a complete, circular, or structurally validated plastome. This study provides a transparent pilot baseline for Mangystau mulberries and establishes quality control criteria for replicated sampling, validated markers, and deeper organelle sequencing.

International Journal of Plant Biology doi: 10.3390/ijpb17070058

Authors: Md. Shahidul Islam Abdul Hannan Mohammad Anwar Hossain Md. Motiar Rohman Richard William Bell

Methylglyoxal (MG), a reactive carbonyl species, is now recognized as a novel signaling molecule regulating abiotic stress tolerance and plant growth. Using tolerant (BHL-25 and BHL-27) and susceptible (BARI Barley-6 and BHL-26) genotypes, the study aimed to reveal the detailed mechanisms of MG-priming-induced salt stress tolerance in barley (Hordeum vulgare L.). Seeds were primed with MG, and seven-day-old seedlings were transferred to hydroponic solution. After one week of seedling growth in hydroponic solutions, the salinity stress was imposed. The five treatments were as follows: control (0 salt + 0 mM MG), salt (16 dS m−1) + 0 mM MG, salt + 0.25 mM MG, salt + 0.5 mM MG, and salt + 1 mM MG. Significant genotype-dependent changes were observed in response to salt stress based on morphological, physiological and biochemical traits. Salt stress significantly impaired shoot length, shoot dry weight, root volume, root dry weight, relative water content, leaf Na+ content and K+/Na+ ratio. Salinity stress caused a significant increase in oxidative indices in all genotypes; however, the tolerant genotypes showed a lower increase. Importantly, in plants grown from MG-primed seeds, the negative effects of salt stress were reversed by modulating the K+/Na+ ratio, the activities of antioxidative and glyoxalase pathway enzymes as well as the redox state of ascorbate and glutathione. In conclusion, MG-mediated salt tolerance was linked to a reduction in reactive oxygen species (ROS) and activation of ROS and MG detoxification processes as well as favorable regulation of the K+/Na+ ratio, glutathione and ascorbate redox state that improved the growth of the barley plants under salinity.

International Journal of Plant Biology doi: 10.3390/ijpb17070057

Authors: Thayná Kelly Formiga de Medeiros Francisco Thiago Coelho Bezerra Gleyse Lopes Fernandes de Souza Marcos Vinícius da Silva Maria Beatriz Ferreira Dayane Gomes da Silva Daniela Rosário de Mello Robevania da Silva Alves Almeida Francisco Eudes da Silva Igor Eneas Cavalcante Alberício Pereira de Andrade Olaf Andreas Bakke Ivonete Alves Bakke Riselane de Lucena Alcântara Bruno

Rising salt concentration in water induces osmotic stress and ionic toxicity, compromising photosynthesis, growth, and survival of threatened species such as Paubrasilia echinata and highlighting the need for stress-mitigating compounds such as salicylic acid. This study evaluated the effect of salicylic acid on the morphophysiological responses of P. echinata seedlings irrigated with saline water. Treatments were arranged in a 2 × 3 factorial scheme, with two electrical conductivity levels of irrigation water (0.5 and 6.0 dS m−1) and three salicylic acid concentrations (0, 2, and 3 mM), randomized across 24 experimental plots containing five plants each in a randomized complete block design. Analyses included growth, relative water content, chlorophyll indices and fluorescence of seedlings. Irrigation water with an electrical conductivity of 6.0 dS m−1 reduced leaf number by 9.09% and PSII efficiency by 26.94%. Under saline conditions, salicylic acid at 2 and 3 mM increased root dry matter by 49.28% and 60.29%, respectively. The highest total chlorophyll index (79.03) was obtained at 2 mM, whereas leaf area peaked at 734.74 cm2 per plant at 3 mM. Salicylic acid enhances salt tolerance in P. echinata. At 2 mM, it improves seedling morphophysiological traits and may support restoration in salinized sites.

International Journal of Plant Biology doi: 10.3390/ijpb17070056

Authors: Behzad Heidari Dugassa Nemie-Feyissa Cathrine Lillo

Accurate chromosome segregation during meiosis requires protection of centromeric cohesion mediated by shugoshin (SGO) proteins and Protein Phosphatase 2A (PP2A). In Arabidopsis thaliana, genetic and cytological studies have demonstrated that PP2A B′ regulatory subunits are essential for maintaining centromeric cohesion; however, direct biochemical evidence for their interaction with SGO1 in plants is lacking. Here, we used microscale thermophoresis (MST) to investigate and quantify the binding between fluorescently labeled GST-SGO1 and the PP2A B′α and B′β subunits. SGO1 exhibited concentration-dependent binding to both subunits, with dissociation constants (Kd) of 5.49 ± 0.88 µM for B′α and 1.89 ± 0.38 µM for B′β, indicating an approximately threefold higher affinity for B′β. These results provide direct quantitative biochemical evidence for a specific interaction between Arabidopsis SGO1 and PP2A B′ subunits.

International Journal of Plant Biology doi: 10.3390/ijpb17070055

Authors: Griselida Rojas-Campos Raúl Vargas Anyela Marcela Ríos-Ríos Eyner Huaman Amilcar Valle-Lopez Manuel Oliva-Cruz

Physalis peruviana L. is an Andean crop of high nutritional and commercial value; however, the limited availability of uniform planting material restricts its large-scale propagation. Indole-3-butyric acid (IBA) is widely used to promote adventitious rooting, although its concentration and application methods influence the response observed throughout the different stages of root development. This study evaluated how IBA concentration and explant origin influenced rooting-related traits and early vegetative growth of in vitro-regenerated P. peruviana shoots during a 30-day ex vitro acclimatization phase. The evaluated variables included rooting percentage, root number, longest root length, root fresh and dry mass, shoot length, leaf and node number, stem diameter, shoot fresh and dry mass, leaf area, and photosynthetic pigment contents. The experiment followed a completely randomized design with a 2 × 4 factorial arrangement consisting of two explant origins (cotyledon and hypocotyl) and four IBA concentrations (0, 400, 800, and 1600 mg L−1), with five biological replicates per treatment combination. All shoots formed at least one visible root, resulting in 100% rooting across all treatment combinations. IBA concentration significantly affected root fresh and dry mass and several shoot-growth traits, whereas root number and longest root length were not significantly affected. Among the concentrations tested, 800 mg L−1 produced the highest root biomass and favorable responses in selected shoot-growth traits, whereas 1600 mg L−1 was associated with lower values for some growth variables. Hypocotyl-derived shoots had more leaves and nodes, greater stem diameter, and higher shoot dry mass than cotyledon-derived shoots. These results indicate a concentration- and trait-dependent response to IBA and identify 800 mg L−1 as the most favorable concentration among those tested for increasing root biomass and selected shoot-growth traits under the evaluated acclimatization conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17070054

Authors: Mst. Lailatul Ferdows Saima Biswas Mizanur Rahman F. M. Jamil Uddin Md. Nayan Aporna Tabassum Api Mohaiminul Islam Nadia Islam Swapan Kumar Paul Md. Harun Rashid

A field experiment was conducted at the Agronomy Field Laboratory of Bangladesh Agricultural University to evaluate the effects of arbuscular mycorrhizal fungi (AMF) inoculation and foliar supplementation of nitrogen (N) and phosphorus (P) on the performance of maize (Zea mays L.) under irrigated and rainfed conditions. The experiment followed a randomised complete block design with two levels of AMF (inoculated and non-inoculated) and four foliar treatments (no N and P, N only, P only, and combined N + P). The recommended dose of fertiliser (RDF) was applied as a soil application to all treatments. AMF inoculation significantly increased grain yield by 8.1% under rainfed and 10.0% under irrigated conditions compared with non-inoculated plants. Foliar application of N and P, especially when they were applied together, significantly improved yield components, including cob length, number of grains per cob, and 1000-grain weight. The highest grain yield (9.08 t ha−1 under rainfed and 10.91 t ha−1 under irrigated conditions) was obtained from the combined treatment of AMF inoculation and foliar N + P application. Redundancy analysis (RDA) and linear mixed-effects modelling (LMM) confirmed that water availability was the dominant factor controlling maize productivity, while AMF inoculation exhibited a stronger independent effect than foliar fertilisation. Under rainfed conditions, the treatment responses were reduced, and maize responded better to foliar N application in combination with AMF than combined N + P application. These findings indicate that the integrated use of AMF and foliar nutrient management enhances maize productivity, but optimal combinations depend strongly on moisture regimes.

International Journal of Plant Biology doi: 10.3390/ijpb17070053

Authors: Silvana Marigorda-Castro Karol Vilchez-Estrada Javier Javier-Alva Yuliana Mendoza-Martínez Delia Talledo-Ancajima Krizia Pretell-Monzón Benoit Diringer Carlos Granda-Wong William Nauray-Huari Gastón Cruz

Neltuma pallida is a multi-purpose tree species of the seasonally dry tropical forests of northern Peru, where it provides essential ecological and socioeconomic functions. However, recurrent defoliation associated with the cecidomyiid gall midge Enallodiplosis discordis may compromise early seedling establishment and the success of forest restoration programs. This study evaluated the effects of larval infestation on foliar integrity and established quantitative damage thresholds in N. pallida seedlings under dry forest conditions. Insects collected from naturally infested plants were identified using an integrative taxonomic approach that combined classical morphological diagnosis with COI-based DNA barcoding obtained by Sanger sequencing. Morphological assessment assigned the defoliating dipteran to E. discordis, while BLASTn v2.17.0. analysis of the 576-bp partial COI sequence showed 92.6% identity and 100% query coverage with Cecidomyiidae records, supporting its taxonomic placement within this family. Field bioassays conducted over a 17-week period, in which 25 individual seedlings were evaluated (N = 25), revealed a strong and significant positive correlation between larval density and foliar damage percentage (r = 0.872; p < 0.001), with moderate damage levels predominating throughout the evaluation period. Despite sustained larval presence, seedlings did not reach severe damage categories, suggesting potential relative tolerance to partial defoliation under the evaluated field conditions. Temperature and relative humidity were not significantly associated with infestation intensity or foliar damage during the study period. Overall, these findings indicate that E. discordis-associated foliar damage represents a relevant, although not necessarily lethal, biotic constraint for the early regeneration of N. pallida under the field conditions assessed. The quantitative thresholds reported here provide useful criteria for dry forest restoration programs, phytosanitary monitoring, and integrated pest management strategies in the Peruvian dry forest.

International Journal of Plant Biology doi: 10.3390/ijpb17070052

Authors: Glynn C. Percival

The frequency and intensity of heatwaves are increasing annually worldwide due to climate change. Combined with the urban heat island effect, elevated heat stress episodes threaten the survival and performance of urban trees, in turn reducing their ecosystem benefits. For this reason, the foliar heat tolerance of 35 Malus genotypes (two species, 32 cultivars, one variety, one hybrid) was evaluated under controlled laboratory assays. Heat injury to foliar tissue was quantified using chlorophyll fluorescence (Fv/Fm) to assess photosystem II (PSII) damage and an electrolyte leakage index (ELI) to evaluate cellular membrane integrity. A preliminary dose–response experiment using six genotypes exposed to a temperature gradient (40–50 °C) was conducted to establish thermal response curves and derive LT50 values (temperature at 50% decline in Fv/Fm). These analyses confirmed substantial genotypic variation in thermal tolerance and identified 45 °C as an optimal discriminatory temperature for large-scale screening. This temperature was subsequently applied to assess heat injury across all 35 genotypes. Measurements were conducted in May (spring foliage) and August (summer foliage) to evaluate ontogenetic influences. In some instances, only one genotype was available for experimental purposes. Consequently, conclusions regarding genotypic differences in heat tolerance are based on replicated datasets, whereas genotypes represented by single-tree sampling are presented for descriptive purposes only. Heat stress significantly affected Fv/Fm and ELI, with strong genotype and seasonal effects recorded. In most genotypes, foliar damage was greater in spring than in summer. Good correlations between Fv/Fm and ELI confirmed their value as complementary physiological measures of heat tolerance in plants. Of the 35 genotypes evaluated, Malus sargentii, M. ‘Prairifire’, M. baccata ‘Jackii’, M. ‘Royal Fountain Huber’ and M. Donald Wyman were the most heat tolerant. The substantial variation in foliar heat tolerance detected across the 35 genotypes tested demonstrates potential for selecting Malus genotypes with superior foliar heat tolerance and highlights opportunities for identifying heat resilient candidates among other under-utilized urban tree taxa.

International Journal of Plant Biology doi: 10.3390/ijpb17070051

Authors: Ichiro Tono Makoto Saito Fujio Terai Yoshiro Baba Hiroyasu Ishikawa

In response to the need for a simple, non-destructive method for evaluating avocado ripeness, we measured chlorophyll-related fluorescence and chromaticity of the outer skin using simple optical equipment and evaluated their relationship with whole-fruit compression (wfc), which was used as a firmness-based ripeness index. A compact system consisting of a blue LED excitation source and a small spectrometer was used to measure fluorescence spectra, and a commercially available colorimeter was used to evaluate chromaticity. Hass avocado samples purchased from multiple retail stores in Japan and stored for different periods were examined. The combination of the fluorescence intensity ratio I740/I685 and the lightness parameter L* showed a moderate correlation with wfc, with R2 = 0.48. The fluorescence ratio I740/I685 was treated not as a direct measure of chlorophyll content, but as a spectral index associated with ripening-related changes in avocado skin, including chlorophyll-related fluorescence and skin optical properties. These results suggest that the combination of simple blue LED-excited fluorescence and chromaticity measurements may be useful as a practical screening approach for roughly estimating avocado ripeness in commercially available fruit.

International Journal of Plant Biology doi: 10.3390/ijpb17070050

Authors: Mohamed Ouknin Youssef Karra Hasnaâ Harrak Abderraouf El Antari Omar Drissi Abdelghani Tahiri Ahmed Wifaya Fouad Elame Meriyem Koufan Redouan Qessaoui Rachid Bouharroud Naima Ait Aabd

Argan tree (Argania spinosa L. Skeels), an endemic Moroccan species, is widely recognized for its traditional medicinal and nutritional uses. It has long been employed to promote skin and cardiovascular health, regulate blood glucose levels, and support overall wellbeing. Traditionally, different parts of the argan tree, including argan oil, leaves, and other plant-derived preparations, have been used to manage various health conditions such as diabetes, gastritis, gastric ulcers, rheumatism, joint and muscle pain, skin disorders including acne, eczema, and inflammation, as well as wound healing and dental problems. This narrative critical review compiles and evaluates current knowledge on the ethnobotany, phytochemistry, pharmacology, and toxicology of argan tree to support its evidence-based application. Relevant literature was collected from major English and French scientific databases, focusing on studies addressing the plant and its principal bioactive constituents. Ethnobotanical data indicate the extensive use of argan oil, leaves, and other plant parts in traditional remedies and dietary practices. Phytochemical investigations reveal a rich composition dominated by unsaturated fatty acids, tocopherols, phytosterols, and polyphenolic compounds. Experimental studies highlight a broad spectrum of biological activities, including antioxidant, antidiabetic, antibacterial, and anti-obesity effects, along with emerging applications in nanotechnology. Toxicological findings generally suggest low toxicity and good safety profiles under tested conditions. Overall, A. spinosa exhibits substantial ethnopharmacological relevance and diverse bioactivities, supporting its continued exploration for nutraceutical and therapeutic applications.

International Journal of Plant Biology doi: 10.3390/ijpb17060049

Authors: Klaudia Lukáčová Vanda Assunta Prota Miroslav Habán Grazia Maria Scarpa

Rosa damascena Mill. is a medicinal and aromatic species of major pharmacological and economic importance, widely valued for its complex profile of bioactive secondary metabolites. While extensive research has focused on field-grown plants and essential oils, comparatively little attention has been devoted to the behavior of R. damascena under in vitro conditions. Plant tissue culture systems provide controlled platforms for investigating secondary metabolism independently of environmental variability; however, their application to R. damascena has produced heterogeneous and often inconsistent results. This review examines the main in vitro culture systems developed for R. damascena, including callus, suspension, and organ-derived cultures, with emphasis on their capacity to accumulate secondary metabolites. Available evidence indicates that undifferentiated cultures generally fail to reproduce the full metabolic complexity observed in planta, particularly for volatile monoterpenes associated with tissue specialization. Nevertheless, several studies demonstrate that in vitro systems can accumulate phenolic compounds with relevant biological activities, supporting their use as experimental models for investigating metabolic regulation. By integrating early studies with recent advances in plant biotechnology, this review highlights current limitations, unresolved questions, and future perspectives for the use of R. damascena in vitro cultures in medicinal plant research.

International Journal of Plant Biology doi: 10.3390/ijpb17060048

Authors: Aigul Madenova Raigul Abdikarimova Zhankeldy Aitymbet Moldir Askarova Zarina Yussupova Irina Kovalchuk Svetlana Dolgikh Aigerim Seisenova Dinara Kaldybayeva Marina Urazaeva Sagi Soltanbekov Balnur Kabylbekova

Apple (Malus domestica Borkh.) rootstocks play a key role in modern intensive orchard systems, where their accurate identification is essential for breeding, nursery production, and certification of planting material. This is particularly important in Kazakhstan, a recognized center of origin of cultivated apple, where local germplasm remains insufficiently characterized at the molecular level. In this study, we integrated simple sequence repeat (SSR) genotyping and morphological trait analysis to develop a reliable approach for the identification of clonal apple rootstocks cultivated in Kazakhstan. Five widely used rootstocks (Zhetysu 5, ARM-18, B-7-35, M9, and B9) were analyzed using 17 polymorphic SSR markers and 30 vegetative traits. SSR analysis revealed moderate genetic polymorphism (PIC = 0.28–0.54; He = 0.35–0.58) and enabled clear discrimination among all studied genotypes. Cluster analysis based on genetic distances grouped rootstocks according to their genetic similarity, reflecting their origin and differentiation. Morphological evaluation demonstrated significant phenotypic variability and identified correlations among key vegetative traits related to plant vigor and leaf development. The integration of molecular and morphological data allowed the development of comprehensive genotype profiles (“molecular–morphological passports”) for each rootstock, ensuring their reliable identification. The proposed approach provides a practical framework for the certification of planting material and the management of apple genetic resources in Kazakhstan. It can be applied to improve nursery systems, support breeding programs, and ensure the production of true-to-type planting material in modern horticulture.

International Journal of Plant Biology doi: 10.3390/ijpb17060047

Authors: Joo Young Kim Karina Idiyatullina Thomas A. Colquhoun

Viola odorata, commonly known as sweet violet, is valued for both its fragrance and medicinal properties. However, seeds of V. odorata exhibit non-deep physiological dormancy, resulting in poor and inconsistent germination. This dormancy can be overcome through physical or chemical treatments, including scarification, stratification, and hormone application. Although mechanical scarification is effective, many commonly used approaches have notable limitations, such as reliance on corrosive chemicals and a lack of uniformity. This study presents a simple and effective mechanical scarification technique using rat-tooth tweezers to gently crack the seed coat tip of V. odorata ‘Empress Augusta’ (EA). This method significantly improved germination. When combined with cold stratification at 4 °C, germination further increased, reaching 70% within 8 weeks. Germination was enhanced even further on Murashige and Skoog (MS) basal salt medium supplemented with 10 mg/L gibberellic acid (GA3), achieving 97.5% germination by day 54. These findings suggest that this simple mechanical scarification method, when combined with cold stratification and GA3 treatment, could provide a reliable and practical strategy for breaking dormancy and facilitating seed germination in V. odorata.

International Journal of Plant Biology doi: 10.3390/ijpb17060046

Authors: Fernando Gomes Hoste Cristhiane Tatagiba Franco Brandão Ana Júlia Câmara Jeveaux-Machado Janyne Soares Braga Pires Felipe Moro Daniel Carvalho de Araújo Bliane Morozini Bacheti Maria Ester Lenzi de Souza Danilo Balla Filho Vinicius de Souza Oliveira Enilton Nascimento de Santana Karin Tesch Kuhlcamp Lúcio de Oliveira Arantes Sara Dousseau-Arantes

Protein hydrolysate-based biostimulants have been increasingly investigated due to their potential to improve seedling growth and physiological responses; however, integrated interpretations of dose-dependent morphophysiological and photochemical responses in Theobroma cacao L. during nursery production remain limited. This study evaluated the effects of increasing concentrations of Terrativa®, an organomineral biostimulant formulated with animal-derived protein hydrolysate, on growth, chlorophyll indices, and photosystem II performance in cacao seedlings of the Catongo and TSH1188 genotypes. The experiment was conducted in a randomized block design in a 2 × 6 factorial arrangement, corresponding to two genotypes and six Terrativa® concentrations (0, 1, 2, 3, 4, and 6 mL L−1). Most morphological and physiological variables exhibited quadratic responses. Intermediate concentrations promoted greater vegetative growth and improved photochemical responses, with maximum values observed for number of leaves (13.98 at 2.50 mL L−1), leaf area (994.10 cm2 at 2.91 mL L−1), stem length (42.79 cm at 3.44 mL L−1), root volume (9.21 cm3 at 3.70 mL L−1), and total chlorophyll (34.58 at 3.08 mL L−1). Catongo seedlings showed greater chlorophyll accumulation, whereas TSH1188 exhibited higher ABS/RC, TRO/RC, and PIabs values, indicating genotype-dependent differences in photochemical energy utilization. Higher concentrations were associated with reduced performance in several variables, suggesting lower physiological efficiency under elevated biostimulant doses. Overall, Terrativa® concentrations between 2.50 and 3.70 mL L−1 were the most effective for promoting balanced seedling development in both cacao genotypes, with Catongo responding more strongly in chlorophyll accumulation and TSH1188 showing greater photochemical responsiveness.

International Journal of Plant Biology doi: 10.3390/ijpb17060045

Authors: Muhammad Fikri Muh Farid Muhammad Fuad Anshori Amin Nur Nirwansyah Amier Salwa Aulia Haruni

The development of new corn varieties is necessary to meet the corn demand. Using full diallel crosses is a method for developing high-yielding hybrid corn. This development requires systematic selection methods that incorporate various approaches in developing selection indices. This study aimed to develop a selection index concept for two full diallel cross populations and select potential hybrid crosses for preliminary yield evaluation. The study involved two populations of 100 corn seed genotypes from full diallel crosses (90 F1 genotypes and 10 selfing elders) and five check varieties per population, planted using a Type II Augmented RCBD in eight blocks. Agronomic characteristics were analyzed using analysis of variance, heritability, factor analysis, and path analysis, with selection criteria aligned with heterotic potential, specific combining analysis, and heterobeltiosis. Analysis revealed significant genetic variation and moderate-to-high heritability for most traits. Correlation, factor, and path analyses identified cob diameter, number of rows per cob, and seeds per row as optimal selection criteria. Selection indices were developed by integrating standard heterosis, specific combining ability, and heterobeltiosis, with weights based on heritability and direct effects. Forty-four hybrid crosses showed potential for preliminary yield tests, with seven having the best final index compared to the reference variety. The p17 × p23 cross had the best potential for the final index. This study demonstrates the effectiveness of integrating multivariate analysis and selection indices in developing superior hybrid corn crosses. Further optimization is recommended through preliminary yield tests and molecular approaches.

International Journal of Plant Biology doi: 10.3390/ijpb17060044

Authors: Mini Devi Vasudha Datta Satish Kumar Bunty Sharma Damandeep Kaur Hardeep Singh Tuli Shafiul Haque Diwakar Aggarwal

Epigenetic regulation plays a significant role in controlling plant secondary metabolism and offers a promising strategy to enhance medicinal alkaloid production without altering the genomic sequence. This review highlights major plant epigenetic mechanisms, including DNA methylation, histone modifications, chromatin remodeling, and non-coding RNAs, and their influence on alkaloid biosynthetic pathways. Particular emphasis is placed on chemical epigenetic modulators, such as DNA methyltransferase and histone deacetylase inhibitors, which can activate silent metabolic genes in a rapid, reversible, and non-GMO manner. Evidence from medicinal plants demonstrates tissue-, dose-, and time-dependent enhancement of alkaloid production. The review further discusses emerging approaches including CRISPR-based epigenome editing, multi-omics integration, and advanced bioinformatics for systems-level understanding of epigenetic regulation. Despite challenges, such as limited species-specific datasets, and concerns regarding long-term stability, epigenetic modulation represents a promising tool for sustainable alkaloid production with important pharmaceutical and industrial applications.

International Journal of Plant Biology doi: 10.3390/ijpb17060043

Authors: Fernando H. Calderon-Quispe Francisco Medina Castro Salvador Mamani Cosi

Puya raimondii, an endangered high-Andean species, exhibits life-history traits that may strongly influence its reproductive strategy; however, its reproductive biology remains poorly understood. Here, we assessed its floral biology, breeding system, and pollination ecology through field observations and controlled pollination experiments. Flowers are incompletely protogynous and herkogamous, with subsequent androecium development leading to contact between anthers and receptive stigma, enabling autonomous self-pollination. Consistent with this mechanism, P. raimondii was found to be self-compatible and capable of autonomous reproduction. The fruit set was high in both populations studied, likely supported by extended floral longevity, abundant nectar and pollen rewards, and a generalized bird pollination system. Hummingbirds were the most frequent visitors; however, passerine birds, including Diglossa brunneiventris, as well as bees, also contributed to pollination to a different extent. These findings indicate that P. raimondii combines reproductive assurance through selfing with the ecological benefits of generalized pollination. This dual strategy may enhance reproductive success under the variable and pollinator-limited conditions of high-Andean ecosystems, highlighting the importance of further ecological and reproductive studies to inform conservation efforts for this endangered species.

International Journal of Plant Biology doi: 10.3390/ijpb17060042

Authors: Ying Wang Liner Zhuo Jinyi Wu Xiaotong Wang Hengfei Lv Xinmin Huang Qinqin He

Verticillium wilt caused by Verticillium dahliae poses a severe threat to pepper (Capsicum annuum) production worldwide. Kunitz trypsin inhibitors (KTIs) play crucial roles in plant disease resistance, yet research on the CaKTI gene family in pepper, especially regarding its regulatory functions in resistance to V. dahliae, remains limited. In this study, members of the CaKTI gene family were systematically identified in the pepper genome, followed by comprehensive analyses of their physicochemical properties, phylogeny, chromosomal localization, conserved motifs, cis-acting elements in promoters, and expression profiles. A total of 22 CaKTI genes were identified, all harboring the beta-trefoil_STI superfamily domain. They were unevenly distributed across four chromosomes, with evident tandem duplication events, and exhibited tissue-specific and developmental stage-specific expression patterns. In the Verticillium-resistant pepper cultivar, five candidate CaKTI genes (CaKTI9, CaKTI6, CaKTI17, CaKTI18, and CaKTI22) were significantly induced and upregulated, particularly in roots, and their expression might be modulated by the methyl jasmonate signaling pathway. This study reveals the molecular features, evolutionary conservation, and defense-associated expression patterns of CaKTI genes in pepper and provides a preliminary exploratory basis for future research on disease resistance and molecular breeding.

International Journal of Plant Biology doi: 10.3390/ijpb17060041

Authors: Edinson Pooll Acuña-Ramirez Raúl Vargas Eyner Huaman Manuel Oliva-Cruz

Physalis peruviana exhibits highly variable and poorly reproducible morphogenic responses under in vitro conditions, limiting the development of reliable regeneration systems. This study evaluated how the interaction between thidiazuron (TDZ), naphthaleneacetic acid (NAA), and explant type influences shoot regeneration in the Colombiano ecotype of Physalis peruviana. A factorial design (2 × 3 × 2) revealed that morphogenic responses were primarily driven by interaction effects rather than by individual plant growth regulators. Hypocotyl explants cultured in 4.54 µM TDZ combined with 0.6 µM NAA showed the highest shoot production, shoot formation capacity, and elongation. In contrast, TDZ alone induced limited shoot production, did not support efficient and organized shoot development, and was associated with abnormal morphologies. The response to NAA was non-linear, with intermediate concentrations maximizing shoot regeneration response, indicating that morphogenic competence operates within a narrow hormonal range. Overall, regeneration in the Colombiano ecotype of P. peruviana evaluated here was governed by the interaction between hormonal balance and explant type, identifying favorable conditions for shoot regeneration under the conditions tested.

International Journal of Plant Biology doi: 10.3390/ijpb17050040

Authors: Vijay Rupa Naser A. Anjum Asim Masood Nafees A. Khan

Soil salinity as a major abiotic stressor has significantly affected crop production worldwide. However, plants have developed complex signaling networks that enable them to adapt and cope with such environmental shifts. Recent research has demonstrated the involvement of hydrogen sulfide (H2S) in signaling cascades that link plant development with stress tolerance management. Similarly, glutathione (GSH), a non-enzyme antioxidant, and a vital tripeptide, has been found to protect plants from oxidative damage and regulate metabolic functions under abiotic stress. As a potential scavenger of ROS, GSH maintains cellular redox homeostasis through the ascorbate-GSH cycle and acts as a signaling molecule for the sulfur-status of plants. This review focusses on: (i) revisiting the concept and current status of soil salinity; (ii) highlighting its impact at cellular and whole-plant levels; (iii) elucidating the role of a H2S and GSH in plant salt stress tolerance; and (iv) exploring the potential interactive roles of H2S and GSH in mitigating salinity impacts. This review will provide valuable insights into the complex network involving H2S and GSH, suggesting pathways for developing climate-resilient crops.

International Journal of Plant Biology doi: 10.3390/ijpb17050039

Authors: Anna Paula Marques Cardoso Walter Esfrain Pereira Juliane Maciel Henschel Diego Silva Batista Francisco Thiago Coelho Bezerra Maria Alaíne da Cunha Lima Gleyse Lopes Fernandes de Souza Patricia da Assunção Macedo Thayná Kelly Formiga de Medeiros Adailson Túlio dos Santos Silva Edmilson Gomes das Neves Magaly Morgana Lopes da Costa Aline Daniele da Cunha Lima Ewerton da Silva Barbosa Francisca Iris da Silva Souza

The availability of water is a limiting factor for the growth and productivity of yellow passion fruit (Passiflora edulis Sims). The use of bioregulators has been investigated as a strategy to mitigate the effects of abiotic stress. Different concentrations of SNP were evaluated on growth, gas exchange, photosynthetic pigments, chlorophyll fluorescence, and enzymatic activity in Passiflora edulis seedlings under different water conditions. The experiment was conducted in a randomized block design, in a 2 × 4 factorial scheme, with two irrigation conditions (80 and 30% of field capacity), combined with three concentrations of SNP (50, 100 and 250 µM) and water (control), with five replications. Water deficit reduced morphological, physiological, and enzymatic parameters. The application of SNP increased root fresh mass (23.56 g at the 100 µM dose) and leaf dry mass (8.21 g at 250 µM SNP), with increases of 24.52% and 30.52% compared to the values obtained under the 50 µM dose, respectively. The highest number of leaves (14) and leaf area (1183.3 cm2) was observed at 250 µM SNP, corresponding to increases of 7.70% and 17.27%, respectively, compared to plants without SNP application. Water deficit reduced growth, gas exchange, chlorophyll fluorescence, and enzymatic activity. SNP promotes improvements in growth; however, it does not mitigate water deficit effects in Passiflora edulis seedlings.

International Journal of Plant Biology doi: 10.3390/ijpb17050038

Authors: Lin Gou Shang Shi Chenghao Zhu Ling Liu Jianmin Tang Rong Zou Xiao Wei

Champereia manillana (Bl.) Merr. var. longistaminea is an evergreen small tree. It belongs to the genus Champereia Griff. (Opiliaceae), and its tender leaves or flower buds can be eaten. It also has important medicinal and nutritional values. Wild populations of C. manillana are small and has a phenomenon of deforestation. Market development is hindered by propagation constraints, including low seed germination rates and poor rooting of cuttings. Standardized cultivation protocols are currently lacking. This paper systematically reviews the current status of propagation and cultivation research on C. manillana and analyzed the primary challenges. Recent research indicated that seed germination obstacles had been preliminarily overcome, and 50% shading was identified as the optimal cultivation condition. However, challenges remain, including slow growth, lack of standardized water and fertilizer management, and unclear molecular mechanisms regulating development. Future research should focus on improving vegetative propagation efficiency, elucidating growth mechanisms via multi-omics, and establishing standardized cultivation protocols from breeding to harvest. These strategies are essential for the sustainable utilization of C. manillana resources.

International Journal of Plant Biology doi: 10.3390/ijpb17050037

Authors: Ma Isabel Reyes-Santamaria David Chávez-Trejo Aracely Hernández-Pérez René Velázquez-Jiménez Eliazar Aquino-Torres Amanulla Khan Antonio de Jesus Cenobio-Galindo Macario Vicente-Flores Iridiam Hernández-Soto

The jalapeño pepper (Capsicum annuum L.) is a crop of great economic and nutritional importance worldwide; however, increasing yield and quality under conditions of reduced synthetic inputs remains a significant challenge, mainly due to restrictions in plant nutrition and stress response capacity; in this context, plant-based biostimulants, such as Ricinus communis extracts, are of particular interest due to their potential to modulate plant metabolism, promote growth, and favor the accumulation of bioactive compounds. In this study, the effect of a foliar-applied biostimulant derived from a methanolic extract of Ricinus communis L. on the physiological, agronomic, and biochemical parameters of jalapeño peppers was evaluated under open field conditions. A randomized complete design with five treatments was established: three extract concentrations (T50: 50 mg L−1, T75: 75 mg L−1, and T100: 100 mg L−1), a commercial biostimulant (Pepton 85/16 ®), and an absolute control. Significant differences (α ≤ 0.05) were observed between treatments T50, T75, and T100 with the application of castor bean and the absolute control in stem diameter, fruit number, yield, and polar and equatorial fruit diameter, as well as phenols, flavonoids, and antioxidant capacity (ABTS and DPPH). The application of R. communis extract (T50, T75, and T100) significantly improved plant performance compared to the control, particularly in yield (up to 270%), fruit number (73%), shoot biomass (up to 38%), and root development (up to 32%). Furthermore, increases in chlorophyll content and in antioxidant-related compounds were observed, including phenols, flavonoids, ABTS, and DPPH (up to 17%). Spearman correlation analysis revealed strong associations between structural and metabolic variables, highlighting the relationship between stem diameter, fruit traits, and bioactive compound accumulation, as well as the link between chlorophyll content and reproductive performance. The 1H NMR analysis indicated the presence of secondary metabolites such as ricin, unsaturated fatty acids, and phenolic compounds; however, their isolation and relationship with the biostimulant activity of the extract require further specific studies. Overall, foliar application of R. communis extract improved the growth, productivity, and biochemical attributes of jalapeño pepper, highlighting its potential as a sustainable alternative for crop management.

International Journal of Plant Biology doi: 10.3390/ijpb17050036

Authors: Anawat Padpaiboon Nuttha Sanevas Pornsawan Sutthinon

Epiphytic and leafless orchids possess specialized root structures and host diverse associated microorganisms, which may contribute to their adaptation to limited access to water, nutrients, and photosynthetic tissues. Microscopic, anatomical, and molecular analyses of aerial and substrate roots of Chiloschista lunifera (Rchb.f.) J.J.Sm. revealed consistent phototrophic microbial biofilms on the velamen surface. These biofilms comprised filamentous and unicellular cyanobacteria, singular bacterial cells, and green algae. Morphological characterisation identified cyanobacteria belonging to five taxonomic orders, which are Chroococcales, Chroococcidiopsidales, Nostocales, Leptolyngbyales, and Synechococcales. 16S rRNA amplicon sequencing confirmed cyanobacterial dominance, with Chroococcidiopsis thermalis PCC 7203 strongly prevalent in root wash samples (up to 99.99% relative abundance), while root homogenate samples harboured a more diverse assemblage including Phormidiaceae, Leptolyngbya, Scytonema, and Calothrix. In addition, a green alga from Watanabeales (Jaagichlorella sp.) was identified based on morphological characteristics. TEM showed diverse cyanobacterial forms and unicellular green algae with well-developed photosynthetic structures. Root anatomy differed between root types. Substrate roots exhibited an inverted kidney-shaped transverse profile, whereas aerial roots were circular, with differences in velamen distribution reflecting adaptation for water retention and substrate attachment. Branched root hairs occurred on substrate roots, while aerial roots possessed unbranched root hairs, indicating functional specialization. Autofluorescence analysis revealed lignified tissues and abundant cortical chloroplasts, suggesting a photosynthetic role of the roots that may compensate for leaflessness. These findings enhance our understanding of the anatomical and ultrastructural features of epiphytic leafless orchid roots and may support future conservation and propagation efforts.

International Journal of Plant Biology doi: 10.3390/ijpb17040035

Authors: Nigussie Kefelegn Solomon Benor Gizachew Haile Gidamo Asnake Fikre Ming Pei You Martin J. Barbetti

Yield is a complex trait influenced by multiple components and their genetic behavior. Therefore, this study was designed to understand the complex nature of yield by uncovering relationships among traits and estimating the genetic parameters of lentil germplasm. One hundred and ninety-two lentil (Lens culinaris) germplasm samples were evaluated at Jamma and Enewari (field experiment) and at Debre Birehan agricultural research center (pot experiment) in Amhara Region, Ethiopia, in 2024 and 2025. An alpha lattice design was used for both set of experiment, and data on 12 agronomic traits were collected. Genetic parameter estimations, correlation, path, principal component and cluster analyses were performed in R. The results revealed substantial phenotypic and genetic variation among the evaluated germplasm, with high broad-sense heritability for flowering, maturity, and seed size traits, and moderate heritability for seeds per plant, plant height, harvest index, and yield. Yield exhibited a strong phenotypic correlation with harvest index (r = 0.78 in field and r = 0.95 in pots), biomass (r = 0.77 in the field and r = 0.78 in pots), seeds per plant (r = 0.42 in the field and r = 0.60 in pots), and podding (r = 0.45 in the field and r = 0.69 in pots). Similarly, genotypic correlations were high with harvest index (r = 0.83 in the field and r = 0.96 in pots), biomass (r = 0.75 in the field and r = 0.80 in pots), seeds per plant (r = 0.0.59 in the field and r = 0.58 in pots), and podding (r = 0.39 in the field and r = 0.68 in pot), and both their direct and indirect effects on yield were significantly high. Therefore, indirect selection through traits such as pods per plant, harvest index, biomass, and seeds per plant would be more effective and reliable for improving seed yield than direct selection for yield itself as this is highly affected by environmental variations.

International Journal of Plant Biology doi: 10.3390/ijpb17040034

Authors: Pablo Santana Vial Niquisse José Alberto Emanoel Chequetto Wellington Castrillon Grélla Laís da Silva Magevski Militino Paiva Carrafa Edilson Romais Schmildt Deurimar Herênio Gonçalves Júnior Fábio Luiz Partelli

This study evaluated the morphological development of 23 Coffea canephora clones in Espírito Santo to identify materials with superior vigor and quality for commercial and breeding purposes. Seedlings from cuttings were arranged in a completely randomized design with ten replicates and assessed at the commercial dispatch stage. Shoot and root growth, biomass, leaf area (LA), Dickson Quality Index (DQI), structural ratios (shoot/root ratio, SRR; height/diameter ratio, HDR), and anatomical traits were measured. Data were analyzed using analysis of variance with Scott–Knott clustering, Pearson correlation, and Principal Component Analysis (PCA). Significant variability was observed among clones. Clones 88, VR3, 8, and LB33 showed the highest stem diameter (SD), total dry mass (TDM), LA, and DQI, with balanced shoot and root development. Leaf area correlated strongly with SD, number of leaves (NL), biomass, and DQI, confirming its role as a seedling quality indicator. PCA identified two groups: a high-performance group with greater vigor and biomass, and a lower-performance group including clones 7, MR04, and VR4. The convergence of methods confirms the robustness of the results. Overall, clones 88, VR3, 8, and LB33 demonstrate superior agronomic potential at the seedling stage, offering promising options for nurseries, growers, and clonal selection programs.

International Journal of Plant Biology doi: 10.3390/ijpb17040033

Authors: Fatima Lakhdar Bouchra Benhniya Jamal Bouhraoua Selma Mabrouki Nazha Samri Badr-ddine El Mouns Taoufik Hachimi Nabila Boujaber Omar Assobhei Samira Etahiri

Phytopathogenic diseases are a major limiting factor in agricultural production. Therefore, scientific research continues to focus on developing effective techniques to mitigate their impact on crop productivity. Seaweed extracts, used as nutritional supplements, organic fertilizers, or bio-pesticides, have demonstrated their ability to enhance plant growth, increase yield, and alleviate the effects of abiotic stress. This study aimed to evaluate the effect of the aqueous extract of Bifurcaria bifurcata, collected from the Atlantic coast of Sidi Bouzid (El Jadida, Morocco), on the growth of Solanum tuberosum L., as well as its bactericidal activity against soft rot caused by Dickeya dadantii. The chemical Characterization revealed that Bifurcaria bifurcata aqueous extract is rich in polar and hydrophilic functional groups. In addition, this extract is particularly rich in phenolic metabolites, particularly phenolic acids, such as p-coumaric acid, ferulic acid, vanillic acid, and caffeic acid, which are known for their potential antimicrobial mechanisms. However, the treatment with 4 g/L extract resulted in a significant reduction in disease symptoms (>60%) and enhanced plant growth parameters, including 21% increase in plant height and 33% increase in leaf number. POX activity increased 6-fold (from 0.12 to 0.7 µmol/min/mg protein), indicating successful elicitation of plant defense mechanisms. The Bifurcaria bifurcata extract could act as novel activators of plant defense mechanisms and serve as potential alternatives to chemical pesticides.

International Journal of Plant Biology doi: 10.3390/ijpb17040032

Authors: Mingcan Fu Xianbin Liu Chengyu Zhang Jian Ding Bin Liu Xiangqian Wu Zhiyang Wang

Systematic comparisons of how plants with contrasting ecological strategies respond to extremely wide nutrient availability gradients remain limited. We investigated the physiological, photosynthetic, and growth adaptations of four plant species representing distinct ecological strategies: Triticum aestivum L. (C3 annual crop), Zea mays L. (C4 annual crop), Ipomoea aquatica Forssk. (C3 annual/perennial aquatic vegetable), and Canna glauca L. (C3 perennial wetland ornamental). Plants were grown hydroponically under nitrogen (N), phosphorus (P), and potassium (K) gradients ranging from 0% to 500% of standard Hoagland nutrient solution. The study results showed that all measured plant traits exhibited characteristic unimodal dose–response patterns. Optimal performance mostly occurred at 100–150% nutrient availability gradients. Severe inhibition or mortality occurred at extreme gradients. Simultaneously, different plant species displayed markedly varying response amplitudes and nutrient-specific sensitivities. Z. mays showed the highest nutrient use efficiency and broadest optimal ranges, particularly for N and K. C. glauca exhibited extraordinary N responsiveness (32-fold increase in photosynthetic rate) but narrow optimal ranges (e.g., 1.01 ± 0.15 μmol CO2/(m2·s) at the 1% N treatment vs. 32.52 ± 3.33 μmol CO2/(m2·s) at the 150% N treatment). I. aquatica showed pronounced P limitation with broad tolerance to supra-optimal N and K. T. aestivum displayed moderate responses with clear sensitivity to N limitation. Root–shoot ratios declined systematically with increasing nutrient availability across all plant species, following negative exponential functions. The results of data analyses revealed significant effects of N, P, and K availability on all the determined plant traits. Correlation analyses demonstrated tight coupling effects among physiological, photosynthetic, and growth traits, indicating integrated whole-plant responses to nutrient variations. These findings reveal that plant ecological strategy systematically modulates nutrient response patterns and provide a quantitative framework for species-specific nutrient management. This study provides a theoretical basis for precision fertilization of aquatic vegetables and wetland plants, and more broadly support species-specific nutrient management in controlled-environment agriculture.

International Journal of Plant Biology doi: 10.3390/ijpb17040031

Authors: Shitong Chang Wanlong Li Zhou Liu Xiaomei Zhou Xiaoxi Shen

Soybean (Glycine max L. Merr.) is one of the most important legume crops globally, providing high-quality plant protein and oil for humans and livestock, and playing a crucial role in nitrogen fixation within agricultural ecosystems. The seeds contain about 35–40% protein by dry weight, with 65–80% of this being seed storage proteins (SSPs). These proteins mainly consist of 11S globulin (glycinin) and 7S β-conglycinin, which accumulate significantly in protein bodies during seed development, providing essential nitrogen and amino acids for seed germination and early seedling growth. Additionally, the composition and structure of SSPs directly determine the nutritional value, processing functionalities (such as emulsification, gelation, and solubility), and potential allergenicity of soybean products. In this study, we conducted a detailed analysis of the structural characteristics, chromosomal localization, phylogenetic relationships, and tissue expression patterns of members of the soybean Gy gene family, laying a theoretical foundation for further exploration of the biological functions of Gy genes in soybeans. We performed comprehensive genomic identification, expression analysis, and subcellular localization of the soybean Gy gene family. The results showed that the seven soybean Gy genes are unevenly distributed across different chromosomes and exhibit distinct expression patterns in soybean seeds, suggesting they may have different roles during seed development. Subcellular localization experiments indicated that the GmGy1 gene might play an important role during seed development. These findings provide significant insights into the functions of the Gy gene family in soybean growth and development and offer potential candidate gene targets for soybean molecular breeding.

International Journal of Plant Biology doi: 10.3390/ijpb17040030

Authors: Khadija Khouya Houda Taimourya Soumia El Malahi Jamaâ Zim Ibtissam Lahrach Aya Elatrassi Bahija Zakri Abdellah Benbya Khadija Basaid Ouiam Lahlou Yasmina Imani Mounia Ennami

Climate change exacerbates water scarcity in semi-arid and arid regions, particularly across the Mediterranean Basin, posing severe challenges to food security and freshwater availability. Non-conventional water resources, such as desalinated seawater, are increasingly considered for supplementing irrigation; however, their exclusive use can induce osmotic stress, nutrient imbalances, and soil alkalinity, thereby limiting crop performance. This study evaluated the agronomic, and physiological impacts of blending freshwater (FW) and desalinated seawater (DSW) for two zucchini (Cucurbita pepo L.) cultivars, Radia and Kayssar, under greenhouse conditions. Five irrigation regimes were tested: T1 (FW100%), T2 (FW75%-DSW25%), T3 (FW50%-DSW50%), T4 (FW25%-DSW75%), and T5 (DSW100%). Moderate blending, particularly T2 and T3, optimized vegetative growth, biomass accumulation, and reproductive performance, maximum yields were obtained under T3, reaching 6.65 kg/plant for Radia and 5.49 kg/plant for Kayssar, while fruit quality, including caliber and soluble solids content (°Brix), was also highest under this regime. These findings support the suggestion that implementing such combined/blended irrigation regimes can enhance vegetative growth, yield, and fruit quality in the face of increasing water scarcity and energy constraints.

International Journal of Plant Biology doi: 10.3390/ijpb17040029

Authors: Abdul Rehaman Syed Nazar ul Islam Arif Tasleem Jan Sajid Khan Mohd Asgher Nafees A. Khan

The common bean (Phaseolus vulgaris L.cv. BR-104) is the most widely cultivated legume crop and serves as a major dietary protein source worldwide. However, climate change-induced drought poses a severe threat to its productivity by disrupting key physiological and biochemical processes. Therefore, identifying effective strategies to enhance drought resilience in the common bean is of considerable importance. The present study investigates the regulatory role of hydrogen sulfide (H2S) in improving drought tolerance. Polyethylene glycol (15% PEG) induced drought stress markedly reduced phenotypic changes (leaf area (LA), plant dry weight (PDW), root length (RL), and shoot length (SL) by 18.6, 20.5, 30.3 and 17.5% respectively), photosynthetic efficiency (Fv/Fm by 28.4%), and photosynthetic pigment concentrations (chlorophyll and carotenoids by 25.6 and 36%, respectively), while significantly elevating oxidative stress markers (H2O2 and TBARS by 137.1% and 169.8%, respectively), leading to impaired stomatal movement and damaged chloroplast structure. Exogenous H2S application as sodium hydrogen sulfide (200 µM NaHS; H2S donor) effectively alleviated drought-induced oxidative damage by boosting endogenous H2S and GSH levels, upregulating activity of antioxidative enzymes, SOD, APX, and GR, thereby promoting reactive oxygen species (ROS) scavenging, and minimizing lipid peroxidation. Moreover, H2S maintained photosynthetic efficiency via improved stomatal openings and chloroplast structure, thus sustaining chlorophyll levels and stabilizing photosystem-II functionality. Enhanced proline accumulation following NaHS application led to improved osmotic adjustment, thereby contributing to overall stress tolerance. The use of a H2S scavenger at 100 µM HT (Hypotaurine) suppressed the mitigating effects of H2S, confirming the role of H2S in enhancing drought tolerance in the common bean. Collectively, these findings highlight the potential effect of H2S as a regulatory signaling molecule to enhance drought resilience in the common bean under drought stress conditions. Further research should explore integrating H2S-based treatments with breeding programs and agronomic practices to develop sustainable strategies to improve drought resilience in legumes and other staple crops under changing climatic conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17040028

Authors: Andrey R. Suprun Stanislava A. Vinogradova Konstantin V. Kiselev Nikolay N. Nityagovsky Alexandra S. Dubrovina

Exogenously induced RNA interference (exoRNAi) is a powerful biotechnology tool for precise gene regulation. The plant chalcone synthase (CHS) gene serves as a valuable model for molecular biology due to its central role in flavonoid biosynthesis. However, there are currently very few studies addressing the advantages and disadvantages of in vitro (enzymatic) or in vivo (bacterial) methods for producing double-stranded RNA (dsRNA) for exogenous application. This study aims to optimize and compare the two methods for producing dsRNAs targeting the Arabidopsis thaliana CHS gene: enzymatic synthesis in vitro using a commercial kit and bacterial synthesis in vivo using an engineered E. coli HT115 (DE3) system. Bacterial synthesis conditions were optimized with respect to IPTG concentration and cultivation time, and the resulting dsRNA preparations were purified and quality-controlled. Their biological activities were assessed by treating A. thaliana plants and analyzing the effects on AtCHS gene expression and flavonoid production using qRT-PCR and HPLC-MS. The results demonstrated that purified AtCHS-dsRNA from both methods effectively suppressed AtCHS expression and downstream flavonoid biosynthetic gene expression, leading to significant reductions in anthocyanins and flavanols. This study confirmed the efficacy of exogenous dsRNAs in regulating plant metabolic pathways and provided a comparative analysis of dsRNA synthesis methods, highlighting their benefits and limitations for practical applications in plant biology and protection.

International Journal of Plant Biology doi: 10.3390/ijpb17040027

Authors: Eugenia León-Jiménez Federico A. Gutiérrez-Miceli Esaú Ruíz-Sánchez Daniel González-Mendoza Benjamín Valdez-Salas María C. Luján-Hidalgo Joaquín A. Montes-Molina Angel M. Herrera-Gorocica

The use of nanoparticles (NPs) synthesized from plant extracts is an alternative to conventional pesticides for the control of agricultural pests. This study aimed to optimize the conditions of synthesis of silver–zinc nanoparticles (Ag-ZnNPs) using extracts of Ocimum basilicum L. and Crotalaria longirostrata Hook. & Arn. and to evaluate their phytotoxic impact on maize seedlings. The Ag-ZnNPs (Ag-Zn nanoparticles) were synthesized by redox reaction between metal ions and reducing metabolites present in the extracts. A response surface methodology (RSM) with three factors (extract concentration, heating time and pressure) was applied to determine the optimal synthesis conditions. The phytotoxicity of nanoparticles (NPs) on maize seedlings was subsequently evaluated on root growth, oxidative stress enzymes (CAT, POD, and APX), and physiology of seedlings. Nanoparticles synthesized from C. longirostrata extract demonstrated superior properties, with an optimization of synthesis (R2 = 95.3%) where the extract concentration (1:4 v/v; p < 0.01) was the critical factor influencing the reduction of metallic ions to nanoparticles. These NPs exhibited superior stability, smaller size (<100 nm), and zeta potential greater than 30 mV compared with O. basilicum extracts. Their NPs exhibited poorer optimization of synthesis (R2 = 43.8%) without the effect of any of the variables evaluated. Essentially, C. longirostrata NPs showed no phytotoxic effects on maize seedlings’ physiological parameters and enhanced root growth (117.2 mm) without negatively affecting photosynthesis (PSII 70-81 FvFm). Ag-ZnNPs synthesized with C. longirostrata exhibited optimal stability and size, along with no observed possible phytotoxicity effects, unlike O. basilicum NPs, which cause stress on maize seedlings. Therefore, Crotalaria longirostrata NPs could represent a promising material for agricultural pest control, with no apparent adverse effect on maize crops.

International Journal of Plant Biology doi: 10.3390/ijpb17040026

Authors: Da Hyeon Lee Jungeun Cho Hyeon Park Tae Hyeon Heo Ju Kyong Lee

This study evaluated morphological variation in 45 accessions of cultivated Perilla frutescens var. frutescens (PFF) and var. crispa (PFC) collected from South Korea and Japan, together with their weedy counterparts, var. frutescens (WPFF) and var. crispa (WPFC) from South Korea, using ten quantitative and ten qualitative traits. Clear morphological differentiation was observed between cultivated and weedy forms in both varieties, particularly in pigmentation, plant fragrance, and seed-related traits. PFF cultivars were characterized by predominantly green pigmentation, a typical frutescens aroma, and significantly larger and heavier seeds, suggesting stronger phenotypic differentiation in leaf and seed utilization. In contrast, PFC cultivars showed substantial morphological overlap with WPFC and WPFF accessions, indicating comparatively weaker phenotypic differentiation. Principal component analysis showed that the first principal component (PC1) explained 25.7% of the total phenotypic variance and was strongly associated with five quantitative traits (plant height, inflorescence length, floret number, seed size, and 100-seed weight) and five qualitative traits (adaxial and abaxial leaf color, flower color, seed color, and seed hardness). Along PC1, PFF cultivars formed a well-defined cluster, whereas PFC cultivars and the weedy WPFF and WPFC accessions exhibited broader dispersion, reflecting greater morphological variability. These results provide morphological insights into the differentiation between cultivated and weedy Perilla accessions and indicate potential domestication-related patterns. However, these interpretations are based primarily on morphological observations, and further genetic and evolutionary studies will be necessary to clarify the domestication history of these taxa. The identified trait complexes provide a useful phenotypic foundation for marker-assisted breeding, informed cultivar selection, and effective germplasm conservation and management.

International Journal of Plant Biology doi: 10.3390/ijpb17040025

Authors: Ulyana Panova Olga Kotsupiy Evgeniya Karpova Elena Ambros

Astragalus glycyphyllos (Fabaceae) is known to be a source of flavones, flavonols, and isoflavones, and its in vitro culture may promote the efficiency and sustainability of obtaining pharmacologically valuable fractions. The aim of this study was to develop an effective plantlet regeneration protocol for A. glycyphyllos, providing the accumulation of phenolic compounds and antioxidants in cultured tissues. The results show a maximum seed germination rate (67.8%) after scarification (mechanical with sandpaper followed by treatment with 50% sulfuric acid) and subsequent sterilization with 1.1% sodium hypochlorite solution. The maximum regeneration rate (95%) was achieved on Murashige and Skoog medium supplemented with 0.5 mg·L−1 thidiazuron. A thidiazuron concentration of 0.05 mg·L−1, combined with a twofold increase in iron chelate content, induced the maximum yield of total flavonoids (8.74 mg·g−1 DW), and significant levels of total phenolics (4.15 mg·g−1) and antioxidants (1.83 mg AAE·g−1) in the microshoot tissues. HPLC analysis showed kaempferol glycosides (1.51 mg·g−1) and acylated kaempferol glycosides (2.76 mg·g−1) as major components. Formononetin in a modest amount (0.09 mg·g−1) was detected in hydrolyzed extracts. The phenolic profiles of the microshoots and native plants coincided in hydroxycinnamic acid composition; meanwhile, quercetin glycosides were present only in in situ plants, and formononetin was found only in the plantlets. The results confirm the prospects of biotechnological methods for the industrial production of standardized medicinal raw materials.

International Journal of Plant Biology doi: 10.3390/ijpb17040024

Authors: Patrick Chiza Chikoti Batiseba Tembo Xinyao He David Paul Hodson Aakash Chawade Pawan K. Singh

Wheat blast, caused by Magnaporthe oryzae pathotype Triticum (MoT), is an emerging fungal disease that poses a serious threat to global wheat production. In Zambia, where wheat is increasingly becoming a vital component for food and nutritional security, the emergence and spread of wheat blast is a growing concern under the influence of climate and agricultural practices changes. This review assesses the risk of wheat blast expansion in Zambia by examining regional climatic trends, future climate projections, crop suitability, and the ecological requirements of MoT. Potential disease hotspots are identified, and integrated management strategies, including chemical, cultural, and biotechnological approaches are evaluated. The review highlights the urgent need for coordinated disease surveillance, the development and deployment of resistant cultivars, and climate-resilient farming practices. By consolidating current knowledge and outlining sustainable management strategies, this paper aims to support effective disease mitigation and safeguard wheat production in Zambia in the face of climate change.

International Journal of Plant Biology doi: 10.3390/ijpb17030023

Authors: Cayetano Navarrete-Molina María A. Sariñana-Navarrete Cesar A. Meza-Herrera Ángeles De Santiago-Miramontes José L. Rodriguez-Alvarez Raúl A. Cuevas-Jacquez Luis M. Valenzuela-Núñez Ricardo I. Ramírez-Gottfried Edir Torres-Rodriguez Rubén I. Marín-Tinoco

The genus Juniperus species is widely distributed in the Northern Hemisphere of the planet Earth. These species are notable for their ability to adapt to extreme environmental conditions, playing a crucial role in ecosystem structure and function. Currently, their expansion is being driven by anthropogenic activities and climate change, posing significant challenges for both control and conservation. The objective of this review was to synthesize the available evidence regarding the ecological importance and impacts of Juniperus on ecosystems, promoting a holistic perspective that contributes to the achievement of the United Nations 2030 Agenda for Sustainable Development. A systematic literature search was conducted using the Scopus database, and only the documents published between 2001 and 2025 were considered for the investigation. The results showed that these species possess a high ecological versatility, favoring their invasive success in disturbed ecosystems, particularly under the influence of climate change and land-use changes. Conversely, Juniperus species facilitate positive ecological outcomes by providing essential ecosystem services that benefit both the human population and the flora and fauna present in these ecosystems. Nevertheless, their expansion also causes negative effects, such as the suppression of herbaceous shrubs and understory cover, alteration of the hydrological function, and accelerated soil erosion, among others. Consequently, the genus Juniperus exhibits a dual ecological role, acting as a hero to many species within these ecosystems, yet a villain to others. In this sense, given its remarkable adaptive dynamism under scenarios of climate change and continuous anthropogenic alterations, it is imperative to promote comprehensive conservation and restoration strategies. These should include ecological monitoring, invasive species control, genetic management, and habitat restoration. Such efforts must be supported by long-term interdisciplinary research to understand and mitigate the ecological, genetic, and social impacts resulting from its expansion. Furthermore, these investigations and strategies must be flexible and locally contextualized to promote genuine ecosystem resilience in the face of the ongoing environmental transformations.

International Journal of Plant Biology doi: 10.3390/ijpb17030022

Authors: Tatiane Otto de França Bárbara Martins Bruno Gonçalves de Oliveira Luiz Antonio Biasi Renato Vasconcelos Botelho António M. Jordão

The use of new grape cultivars is essential for the continued development of Brazilian viticulture. Thus, this study aimed to determine the general physicochemical parameters, global phenolic composition, and antioxidant capacity of grape musts from the Portuguese red variety ‘Touriga Nacional’ during ripening in two Brazilian vineyards (states of Rio Grande do Sul and Santa Catarina). The results were compared with data obtained from the same variety cultivated in a vineyard located in northern Portugal, which is the region of origin of this variety. This research was conducted over three consecutive vintages (2022–2024). Overall, the results indicated that soil and climate conditions at each location were associated with differences in the composition of ‘Touriga Nacional’ grape musts. Grapes from both Brazilian vineyards showed significantly higher berry weight, must volume, and yield compared with grapes collected from the Portuguese vineyard. On the other hand, grapes collected from the vineyard located in the state of Santa Catarina exhibited the highest values of total titratable acidity, malic acid, total phenols, flavonoids, total anthocyanins, and chromatic characteristics. Nevertheless, grapes collected from the Portuguese vineyard showed higher values of total tannins. The results suggest that the ‘Touriga Nacional’ variety shows better adaptation to the conditions of the Santa Catarina vineyard than to those of the Rio Grande do Sul vineyard. These findings help winegrowers, particularly in southern Brazil, to have more options for introducing different grape varieties, thereby contributing to the production of wines with distinctive characteristics, while consumers will have access to a greater diversity of wines available on the market.

International Journal of Plant Biology doi: 10.3390/ijpb17030021

Authors: Magdoline Mustafa Ahmed Osman Ronald Kuunya Rania Alrasheed András Tamás Illés Árpád Tamás Rátonyi

Water stress is a major challenge that limits the growth, development, and yield of maize (Zea mays L.) worldwide, especially under climate change, particularly abiotic stresses. This review presents a comprehensive bibliometric and literature-based analysis of research on maize’s response to drought and water scarcity from 1975 to 2025, using VOS viewer1.6.20 software, facilitating the detection of co-authorship networks, thematic groupings, and patterns of keyword co-occurrence within the selected publications. Data from the Web of Science were examined to assess publication trends, keyword networks, and international collaborations. A literature search was conducted by combining the keywords ((“maize”) OR (“corn”) AND (“drought”) OR (“water stress”) AND (“yield”)). Relevant studies were retrieved from the Web of Science (WoS) database using this search string. The Mann–Kendall test revealed a significant positive trend (p = 0.001) in publications on water scarcity (R2 = 0.8526), with 396 relevant studies identified globally, regardless of language. The analysis of publication trends demonstrated a statistically significant increase in the volume of publications over the examined period, featuring major contributions from Kenya, Switzerland, Mexico, China, and the United States. The most influential publication focuses on a biotic stressor that significantly reduces maize grain yield. These results emphasise the need for integrated strategies that combine genetic improvement and sustainable irrigation to mitigate the impacts of water stress. This comprehensive analysis provides a foundation for guiding future research and policy development to improve maize resilience against the effects of water stress under changing climatic conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17030020

Authors: Luis Cagua-Montaño Karen Rodas-Pazmiño Jorge Fabricio Guevara-Viejó Betty Pazmiño-Gómez Ignacio Isa-Vargas Samuel Valle-Asan Rodrigo Pazmiño-Pérez Stefany Pilar Jami Jami Ivana Alexandra Armijos Galarza Edgar Rodas-Neira Cristhian Emilio Delgado Espinoza

Seed germination and early root growth are decisive for crop establishment, yet responses to ionic environments can be strongly genotype-dependent. This study evaluated the effect of supplementing an agar-based in vitro system with a commercial NPK fertilizer on the germination dynamics and early seedling traits of Raphanus sativus L. Seeds were tested in two solid media: A (1.3% agar, no fertilizer) and AF (1.3% agar supplemented with 0.45 g of granular NPK fertilizer (15–30–15) per 200 mL medium), using a completely randomized 3 × 2 factorial design. Germination percentage and synchrony are key constituents of seedlot evaluation because they jointly capture both viability and the temporal coordination of emergence. However, final germination percentage alone does not reflect the timing and uniformity of germination, which can be critical for predicting establishment and subsequent performance. Therefore, indices such as mean germination time (MGT), coefficient of velocity of germination (CVG), and interval germination rates are frequently employed to describe germination dynamics. In addition to germination dynamics, early seedling morphometry (e.g., root and hypocotyl traits) can provide complementary information on early vigor and stress sensitivity under contrasting media or environmental conditions. Root elongation was significantly reduced by fertilization in ASD and GE, whereas AS exhibited consistently shorter roots with no significant response. PCA summarized 86.3% of the total variance in the first two components, separating treatments along a vigour/architecture axis and a germination capacity axis (%G), and hierarchical clustering identified five response groups. Overall, a low-cost agar + fertilizer system effectively discriminated genotype-specific sensitivity to an ionic environment during early establishment, highlighting the need to consider variety-dependent thresholds when using commercial fertilizers for in vitro screening.

International Journal of Plant Biology doi: 10.3390/ijpb17030019

Authors: Almagul Malimbayeva Batyrgali Amangaliev Erbol Zhusupbekov Akerke Soltanayeva Aina Sagimbayeva Zhuldyz Oshakbayeva Karlyga Rustemova Maksat Batyrbek

Efficient nutrient management is essential for enhancing flax productivity under semi-arid conditions. A two-year field experiment (2024–2025) was conducted in southeast Kazakhstan to evaluate the effects of integrated foliar fertilization with macro- and micronutrients and biofertilizers on the growth, seed quality, and yield of flax (Linum usitatissimum L.). The experiment was arranged in a randomized complete block design with five treatments: T1 (control, absolute zero fertilization (N0P0K0), i.e., soil without any additional nutrient applications), T2 (N60P60K60), T3 (N60P60K60 + foliar macro–micronutrients), T4 (biofertilizer), and T5 (N60P60K60 + foliar macro–micronutrients + biofertilizer). Integrated foliar fertilization significantly increased nitrogen, phosphorus, and potassium concentrations in vegetative biomass and seeds, leading to higher nutrient uptake and improved nutrient use efficiency compared with mineral fertilization alone. Treatments combining foliar macro- and micronutrients with biofertilizers (T3 and T5) enhanced plant establishment, biomass accumulation, and dry matter allocation to reproductive organs. Seed yield increased from 0.58 to 0.89 t ha−1, while protein and oil contents ranged from 27.0 to 28.4% and 39.8–41.8%, respectively. The combined foliar treatment showed the highest and most stable performance, likely due to improved nutrient uptake and plant growth. These findings indicate that integrated foliar fertilization is an effective and sustainable strategy for improving flax yield stability, nutrient efficiency, and seed quality under semi-arid conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17030018

Authors: Carlos Armas-Díaz David Montesinos-Pereira Lázaro Grisales Maria Corujo José Luis Vázquez-Gutiérrez Daniel Blandón-Granada Eduardo Hernández-Bolaños Andrés Acosta-Pérez Violeta Sánchez-Retuerta Beatriz Porras Laura Cuyas Luis Matías-Hernández

Biostimulants represent a sustainable strategy to enhance the therapeutic potential of medicinal plants, which often exhibit low and variable levels of bioactive compounds. Cannabis sativa, a medicinally important species, produces diverse cannabinoids, such as THC, CBD, CBG, and CBC, whose profiles depend on plant chemotype and determine pharmacological activity. We developed a novel plant-based biostimulant, Tricostimulant™, to optimize cannabinoid production in Cannabis sativa. Field trials demonstrated increased biomass and selective enhancement of cannabinoid content. In high-CBD chemotypes, Tricostimulant™ was associated with higher CBD and CBG without relevant changes in THC levels, whereas in high-THC chemotypes, higher THC values were observed without evident variation in CBD. The most pronounced differences were observed when the biostimulant was applied during the vegetative stage, highlighting the importance of application timing. These results indicate the potential of Tricostimulant™ to modulate cannabinoid profiles, contributing to improved optimization and standardization of cannabis-based therapeutics. Further research is required to confirm these findings and elucidate the underlying mechanisms of biostimulant action.

International Journal of Plant Biology doi: 10.3390/ijpb17030017

Authors: Alexander V. Babosha Pavla O. Loshakova Danila A. Shchelkanov Anastasia D. Alenicheva Margarita M. Gevorkyan Alina A. Pogost

This study used cryoSEM to analyze the seasonal stability of leaf surface micromorphology in cereal hybrids derived from crossing maternal ×Trititrigia cziczinii × Thinopyrum junceum lines with paternal wheat–wheatgrass hybrids. Over two growing seasons, relatively rare traits showed high stability, while most traits exhibiting initial diversity demonstrated seasonal variability. Paternal traits (hairs, prickles, elongated silica cells) predominated in hybrids, and hybrid diversity correlated significantly with paternal, but not maternal, line diversity. In 2025, a significant decrease in some paternally specific traits and an increase in rounded silica cells were observed compared to 2024. Coordinated dynamics were revealed: variations in maternal traits correlated positively with each other and negatively with some paternal traits. While certain micromorphological features exhibited relative stability, employing such traits for taxonomic purposes necessitates caution and a thorough understanding of their inherent variability ranges.

International Journal of Plant Biology doi: 10.3390/ijpb17030016

Authors: Farah Abu Siam Saeid Abu-Romman Saja A. K. Al-Rubaye Ruba M. AL-Mohusaien Monther T. Sadder

Ascorbate peroxidase (APX) is a heme-containing enzyme involved in hydrogen peroxide (H2O2) detoxification within the ascorbate–glutathione (AsA–GSH) cycle. In this study, the full-length genomic DNA and cDNA of an APX1 gene (VsAPX1) were cloned and characterized from Vicia sativa. The genomic sequence of VsAPX1 is 2425 bp in length and comprises 10 exons separated by nine introns, with the first intron located within the 5′ untranslated region (5′UTR). The corresponding cDNA is 1010 bp long and includes a 61 bp 5′UTR, a 753 bp open reading frame, and a 196 bp 3′UTR. VsAPX1 encodes a predicted cytosolic APX protein of 250 amino acids, with a molecular weight of 27.1 kDa and a theoretical isoelectric point (pI) of 5.60. Bioinformatics analysis revealed that the deduced VsAPX1 protein shares high sequence similarity with cytosolic APX1 proteins from other plant species, contains conserved APX domains, and clusters within the cytosolic APX clade in phylogenetic analysis. Quantitative real-time PCR analysis showed that VsAPX1 expression exhibits transient and moderate changes in response to abiotic stress and phytohormone treatments. Transcript levels increased at early time points following heat stress (42 °C), abscisic acid, and salicylic acid treatments, and after 4 h of jasmonic acid exposure, whereas hydrogen peroxide treatment resulted in a gradual down-regulation of expression. Overall, this study provides the first molecular and expression characterization of a cytosolic APX1 gene from Vicia sativa and establishes a foundation for future functional analyses of antioxidant genes in this species.

International Journal of Plant Biology doi: 10.3390/ijpb17030015

Authors: Ali Ait Youssef Reda Meziani Samira Serghat Timothy O. Jobe Mohamed Fokar Allal Douira

Date palms, a vital Moroccan crop that typically flowers once a year, displayed a rare double flowering phenomenon in the summer of 2023. This study investigated the occurrence of this phenomenon across three small oases in the Zagora region of southeastern Morocco. Field surveys revealed that 60% of spring-blooming palms also produced a second bloom in July, affecting trees of all ages, sexes, and varieties. This secondary flowering cycle featured a compressed development period, leading to limited fruit enlargement and a failure of most fruit to reach maturity. Analysis suggests that climatic fluctuations, specifically a delayed temperature rise during the normal spring cycle and relatively cooler shifts in July 2023, likely disrupted the palms’ reproductive schedule, triggering the anomaly. Despite the failed second harvest, the phenomenon did not have a negative impact on the palms’ productivity for the subsequent year, confirming that double flowering is a complex, climate-influenced event that requires further research to understand its full implications for local date production.

International Journal of Plant Biology doi: 10.3390/ijpb17030014

Authors: Nataliia Tkachuk Volodymyr Antonenko Svitlana Kyriienko Erzsébet Kohut Anita Szikura Yurii Karpenko Oleksandr Yakovenko Oksana Sahach Yaroslav Novikov Oleksandr Lukash

The search for new growth-regulating compounds remains a relevant research direction in view of the issue of food security. Previously, a number of thiazolyl acetic acid derivatives have been synthesized, which are promising biologically active compounds according to their physicochemical characteristics. The aim of this work was to study the growth-regulating properties of both previously and newly synthesized thiazolyl acetic acid derivatives using a growth phytotest with Lepidium sativum and Sinapis alba. This study was carried out under laboratory conditions of phytotesting growth indicators of test plants of the class Dicotyledones—L. sativum and S. alba under the influence of 10 μg/mL, 100 μg/mL, and 1000 μg/mL aqueous solutions of the compounds with a comparative analysis of the action of the active components of RhizoponTM and herbicide benazolin. It was found that, exhibiting high herbicidal properties at a concentration of 1000 μg/mL (primarily the compound with a benzothiazole fragment), the studied thiazolyl acetic acid derivatives with decreasing concentration (100 μg/mL and 10 μg/mL) reduce phytotoxicity to its complete elimination against L. sativum and S. alba for the compound 2-[2-(N-tert-butoxycarbonyl)-aminoethyl-1,3thiazol-4-yl]acetic acid (compound 3), as well as against L. sativum for the compound 5-phenylthiazol-2-yl acetic acid (compound 5). A weak stimulating effect on the length of the above-ground part of S. alba seedlings was recorded for 2-[2-(3,3,3-trifluoropropyl)-1,3thiazol-4-yl]acetic acid (compound 1) and 2-[2-(N-tert-butoxycarbonyl)-aminoethyl-1,3thiazol-4-yl]acetic acid (compound 3) at their concentration of 10 μg/mL; however, an improvement in the vitality index under the action of these compounds was not observed. The results obtained in this study indicate the biological activity of both previously and newly synthesized thiazolyl acetic acid derivatives, namely their growth-regulatory properties, expanding knowledge about promising herbicidal compounds with a possible hormetic effect, which requires further research.

International Journal of Plant Biology doi: 10.3390/ijpb17020013

Authors: Gleyse Lopes Fernandes de Souza Francisco Thiago Coelho Bezerra Rejane Maria Nunes Mendonça Walter Esfrain Pereira Marlene Alexandrina Ferreira Bezerra Tayd Dayvison Custódio Peixoto José Adeilson Medeiros do Nascimento Roberto Ítalo Lima da Silva Thayná Kelly Formiga de Medeiros Maria Alaíne da Cunha Lima Daniela Rosario de Mello Anne Alícia Meneses Ferreira Santana Antenor Pereira de Araújo Neto Anna Paula Marques Cardoso Lourival Ferreira Cavalcante

Salinity causes morphophysiological changes that compromise the growth and production of cultivated species, such as Passiflora edulis. However, wild species better tolerate environmental adversities. Therefore, we evaluated the performance of P. edulis scion (Guinezinho, BSR YG1, BRS SC1) grafted on Passiflora rootstocks (P. cincinnata, P. foetida, and P. edulis), regarding the electrical conductivity of irrigation water (0.5 and 3.0 dS m−1), and it was hypothesized that rootstocks would mitigate the effects of salinity and that there is a difference between non-grafted cultivars. Grafted plants reached the trellis stage sooner, and the use of P. foetida rootstocks reduced the time to prune the stem. The highest productivity was obtained with the YG1 cultivar grafted onto P. foetida, under irrigation with water salinity, reaching 8073.96 kg ha−1 and exceeding by up to 139.19% the other grafting and electrical conductivity of the irrigation water. The grafting technique proved effective in mitigating the effects of salinity, particularly the combination between P. foetida and YG1 cultivar P. edulis, which showed compatibility and superior agronomic performance under saline stress conditions. These results indicate a promising strategy for the sustainability of yellow passion fruit cultivation in semi-arid regions, contributing to the maintenance of productivity, even in environments with restricted water quality resources.

International Journal of Plant Biology doi: 10.3390/ijpb17020012

Authors: Jaqueline Zuta Lopez Rosalynn Y. Rivera Elver Coronel Castro Nixon Haro Gerson Meza-Mori Oscar Gamarra Manuel Oliva-Cruz Carlos A. Amasifuen Guerra José Giacomotti Elí Pariente

Globally, coffee-based agroforestry systems are recognized for their capacity to integrate agricultural production with biodiversity conservation, particularly in tropical landscapes under intense anthropogenic pressure. However, significant knowledge gaps remain regarding floristic composition, arboreal structure, and the ecological importance of woody species in Andean agroforestry systems of the Peruvian Amazon, especially along altitudinal gradients. The objective of this study was to characterize the diversity, floristic composition, arboreal structure, and ecological value of woody species in coffee-based agroforestry systems in the Department of Amazonas, Peru. Forest inventories were conducted in twelve one-hectare plots, recording dasometric variables, estimating diversity indices, analyzing floristic affinity, and calculating the Importance Value Index of species. A total of 57 tree species belonging to 41 genera and 25 families were recorded, with moderate diversity levels and a marked dominance of species from the Fabaceae family. The structure showed a predominance of young individuals, concentrated in low and intermediate diameter and height classes, and a moderate shade cover suitable for coffee cultivation. The species with the highest ecological and productive value were Pinus tecunumanii, Colubrina glandulosa, Clitoria juninensis, Inga edulis, and Inga mendozana, which perform key functions related to shade provision and soil fertility. These results are transferable to other coffee agroforestry systems in tropical montane regions and provide relevant evidence for sustainable forest management, biodiversity conservation, and productive optimization, issues of international interest in the agricultural and agroforestry sectors.

International Journal of Plant Biology doi: 10.3390/ijpb17020011

Authors: Maria Gancheva Aleksandr Tkachenko

Oxalis tuberosa (oca) is a tuber crop native to the Andes, valued for its nutrition but understudied genetically. Its strict short-day (SD) tuberization suggests a photoperiodic control mechanism similar to that of potato, where an FT-like protein acts as a mobile “tuberigen” signal. To identify this key regulator, we generated a de novo genome assembly for oca using long- and short-read sequencing. Integrated transcriptomic analysis of leaves under long-day (LD) and SD conditions, along with stems, roots, and tubers, enabled gene annotation and expression analysis. Our study focused on the Phosphatidylethanolamine-Binding Protein (PEBP) gene family, the source of florigen and tuberigen signals. We identified 23 OtPEBP genes and characterized their expression patterns. Among these, we discovered three FT-like homologs that are specifically and strongly upregulated in leaves under SD conditions. We therefore propose these genes as the prime candidates for the mobile tuberigen signal in oca. This work provides the foundational genomic resource for O. tuberosa and advances our understanding of the conserved photoperiodic network controlling storage organ formation beyond the Solanaceae family.

International Journal of Plant Biology doi: 10.3390/ijpb17020010

Authors: Marly Guelac-Santillan Jherson Rojas-Vargas Elmer Chávez-Chacón Eryka Gaslac-Zumaeta Manuel Oliva-Cruz Angel F. Huaman-Pilco

Anthracnose is one of the most destructive diseases of avocado worldwide; however, foliar infections remain poorly documented in Peru. We investigated the etiology of necrotic leaf lesions observed in avocado plantations in Amazonas and assessed the in vitro antifungal activity of two Piper essential oils (EOs). Incidence was quantified in a 420-tree plot (n = 150 plants). Two representative isolates (MGS03, MGS04) were obtained from symptomatic leaves and characterized by morphology and multilocus sequencing (ITS, CHS-1, ACT, and TUB2). Maximum-likelihood phylogeny within the C. gloeosporioides species complex clustered with C. fructicola. Pathogenicity tests on detached leaves (unwounded inoculation) reproduced field symptoms and fulfilled Koch’s postulates. The antifungal activity of Piper carpunya and P. aduncum EOs (50–1000 µL L−1) was evaluated using poisoned-medium assays, revealing a strong dose-dependent inhibition of mycelial growth. Inhibition reached >89.8% at 500 µL L−1 and ~100% at 1000 µL L−1, with P. aduncum showing slightly higher activity. This study provides the first confirmed record of C. fructicola associated with necrotic leaf lesions in avocado in Peru and demonstrates the promising antifungal potential of Piper EOs as eco-friendly candidates for anthracnose management.

International Journal of Plant Biology doi: 10.3390/ijpb17020009

Authors: Sanja Puljas Juraj Kamenjarin Ivica Šamanić

Cynipid gall wasps are known for their ability to manipulate host plant development, redirecting undifferentiated tissues into complex, highly specialised structures. In this study, we investigated how Andricus quercustozae larvae manipulate axillary bud tissues of Quercus virgiliana across four key stages of gall development: initiation, differentiation and growth, maturation, and lignification. Using detailed histological analyses, we characterised progressive tissue differentiation within galls, focusing on the organisation of nutritive, protective, and vascular tissues. Gall development was marked by sustained hyperplasia and hypertrophy, extensive vascular proliferation, and progressive cell wall lignification, resulting in a complex organ optimised for larval nutrition and protection. To complement these anatomical observations, we conducted a preliminary transcriptomic comparison between gall tissue and unmodified leaf tissue. Gene expression analyses revealed suppression of photosynthesis-related functions and coordinated modulation of developmental, regulatory, and metabolic pathways, consistent with a transition from assimilatory leaf tissue to a specialised nutrient sink. Integration of anatomical and transcriptomic evidence supports a model in which cynipid gall wasps intervene at key regulatory nodes of bud development, progressively reprogramming host tissues to form a functionally autonomous gall. These findings provide new insight into the extended phenotype and highlight the plasticity of plant developmental programmes under insect control.

International Journal of Plant Biology doi: 10.3390/ijpb17010008

Authors: Mariya Todorova Zhelyazkova

Lavender has been cultivated in Bulgaria for over a century. The high essential oil content and quality of Bulgarian lavender varieties have established the country as a leading global producer. Studies into the crop’s genetic diversity are essential for selecting varieties best suited to specific environmental conditions, maximizing resilience and yield. Therefore, identifying appropriate genetic markers to monitor lavender diversity is a key prerequisite for developing effective crop selection strategies, particularly in response to the challenges posed by global climate change. In this study, we evaluate the versatility of markers for assessing genetic diversity of lavender genotypes. A total of 96, 97 and 96 bands were recorded using the 13 Start Codon Targeted Polymorphism (SCoT), 13 Inter-Simple Sequence Repeat (ISSR) and 14 Cis-Element Aligned Polymorphism (CEAP) primers, respectively. All amplification programs used were successful in the studied genotypes. Additionally, four informative primers of each marker system were applied for assessment of the within-field genetic variability in two lavender plantations from Bulgaria. This is the first report on the combined use and comparison of CEAP, SCoT and ISSR primers in lavender genotypes in Bulgaria.

International Journal of Plant Biology doi: 10.3390/ijpb17010007

Authors: Unius Arinaitwe Dalitso Noble Yabwalo Abraham Hangamaisho Shillah Kwikiiriza Francis Akitwine

Micronutrients, particularly boron (B), iron (Fe), manganese (Mn), and zinc (Zn), are pivotal for cotton (Gossypium spp.) growth, reproductive success, and fiber quality. However, their critical roles are often overlooked in fertility programs focused primarily on macronutrients. This review synthesizes recent advances in the physiological, molecular, and agronomic understanding of B, Fe, Mn, and Zn in cotton production. The overarching goal is to elucidate their impact on cotton nutrient use efficiency (NUE). Drawing from the peer-reviewed literature, we highlight how these micronutrients regulate essential processes, including photosynthesis, cell wall integrity, hormone signaling, and stress remediation. These processes directly influence root development, boll retention, and fiber quality. As a result, deficiencies in these micronutrients contribute to significant yield gaps even when macronutrients are sufficiently supplied. Key genes, including Boron Transporter 1 (BOR1), Iron-Regulated Transporter 1 (IRT1), Natural Resistance-Associated Macrophage Protein 1 (NRAMP1), Zinc-Regulated Transporter/Iron-Regulated Transporter-like Protein (ZIP), and Gossypium hirsutum Zinc/Iron-regulated transporter-like Protein 3 (GhZIP3), are crucial for mediating micronutrient uptake and homeostasis. These genes can be leveraged in breeding for high-yielding, nutrient-efficient cotton varieties. In addition to molecular hacks, advanced phenotyping technologies, such as unmanned aerial vehicles (UAVs) and single-cell RNA sequencing (scRNA-seq; a technology that measures gene expression at single-cell level, enabling the high-resolution analysis of cellular diversity and the identification of rare cell types), provide novel avenues for identifying nutrient-efficient genotypes and elucidating regulatory networks. Future research directions should include leveraging microRNAs, CRISPR-based gene editing, and precision nutrient management to enhance the use efficiency of B, Fe, Mn, and Zn. These approaches are essential for addressing environmental challenges and closing persistent yield gaps within sustainable cotton production systems.

International Journal of Plant Biology doi: 10.3390/ijpb17010006

Authors: Weverton Gomes da Costa Hélcio Duarte Pereira Gabi Nunes Silva Aluizio Borém Eveline Teixeira Caixeta Antonio Carlos Baião de Oliveira Cosme Damião Cruz Moyses Nascimento

Genome-wide association studies (GWAS) are essential for identifying genomic regions associated with agronomic traits, but Linear Mixed Model (LMM)-based GWAS face challenges in capturing complex gene interactions. This study explores the potential of machine learning (ML) methodologies to enhance marker identification and association modeling in plant breeding. Unlike LMM-based GWAS, ML approaches do not require prior assumptions about marker–phenotype relationships, enabling the detection of epistatic effects and non-linear interactions. The research sought to assess and contrast approaches utilizing ML (Decision Tree—DT; Bagging—BA; Random Forest—RF; Boosting—BO; and Multivariate Adaptive Regression Splines—MARS) and LMM-based GWAS. A simulated F2 population comprising 1000 individuals was analyzed using 4010 SNP markers and ten traits modeled with epistatic interactions. The simulation included quantitative trait loci (QTL) counts varying between 8 and 240, with heritability levels set at 0.5 and 0.8. These characteristics simulate traits of candidate crops that represent a diverse range of agronomic species, including major cereal crops (e.g., maize and wheat) as well as leguminous crops (e.g., soybean), such as yield, with moderate heritability and a high number of QTLs, and plant height, with high heritability and an average number of QTLs, among others. To validate the simulation findings, the methodologies were further applied to a real Coffea arabica population (n = 195) to identify genomic regions associated with yield, a complex polygenic trait. Results demonstrated a fundamental trade-off between sensitivity and precision. Specifically, for the most complex trait evaluated (240 QTLs under epistatic control), Ensemble methods (Bagging and Random Forest) maintained a Detection Power (DP) exceeding 90%, significantly outperforming state-of-the-art GWAS methods (FarmCPU), which dropped to approximately 30%, and traditional Linear Mixed Models, which failed to detect signals (0%). However, this sensitivity resulted in lower precision for ensembles. In contrast, MARS (Degree 1) and BLINK achieved exceptional Specificity (>99%) and Precision (>90%), effectively minimizing false positives. The real data analysis corroborated these trends: while standard GWAS models failed to detect significant associations, the ML framework successfully prioritized consensus genomic regions harboring functional candidates, such as SWEET sugar transporters and NAC transcription factors. In conclusion, ML Ensembles are recommended for broad exploratory screening to recover missing heritability, while MARS and BLINK are the most effective methods for precise candidate gene validation.

International Journal of Plant Biology doi: 10.3390/ijpb17010005

Authors: Aleksandra Yu. Kroupina Pavel Yu. Kroupin Mariya N. Polyakova Malak Alkubesi Alana A. Ulyanova Daniil S. Ulyanov Natalya Yu. Svistunova Alina A. Kocheshkova Gennady I. Karlov Mikhail G. Divashuk

Speed breeding technologies offer a promising avenue for accelerating crop improvement, yet their application to biennial crops like sugar beet remains constrained by extended generation cycles. This study examined the effects of supplemental phosphorus-potassium (PK) nutrition on the development of two hybrids under a speed-breeding protocol. Plants received one of four nutritional regimes: PK supplementation, potassium (K) supplementation, standard Knop’s solution (KS), or nutrient deficiency (D). Digital phenotyping confirmed that adequate nutrition maintained photosynthetic health, as deficiency significantly reduced NDVI and increased PSRI by 75 days. The most notable, genotype-specific effects were observed in reproductive architecture. PK nutrition significantly increased the median number of flower stalks by 17% in Smart Iberia KWS (21.0 vs. 18.0) and substantially in Dubravka KWS (33.0 vs. 1.0). PK also supported root development, increasing mini-steckling weight by 45–183% under white light. In the generative phase, plants under PK nutrition consistently showed the highest progression to flowering and capsule formation. A consistent increase in median 1000-seed weight of 24–36% was associated with PK treatment. In conclusion, supplementing standard nutrition with phosphorus and potassium enhances key yield-related architectural traits and supports reproductive development in sugar beet under speed-breeding conditions, with the magnitude of response depending on genotype. This provides a practical basis for optimizing mineral nutrition to improve the efficiency of accelerated breeding protocols. This provides a practical basis for optimizing mineral nutrition to improve the efficiency of speed breeding protocols.

International Journal of Plant Biology doi: 10.3390/ijpb17010004

Authors: Nikolay Velkov Stanislava Grozeva

Systems favoring cross-pollination, such as male sterility and female flowering type, are of great importance in the development of new hybrid cultivars and their seed production. The advantages of male sterility are expressed in the production of cheaper and competitive seeds. The presence of this characteristic in watermelon is not common, and in some cases, it is accompanied by negative manifestations. A collection of 150 watermelon genotypes was tested at the Maritsa Vegetable Crops Research Institute, Bulgaria, over the past nine years to search for a genetic source of male sterility. The results revealed that two mutations were found. The first mutation was in a plant of the Asar variety, which formed completely degenerated structures in the place of male and female flowers that were completely sterile. The other mutation affected male flowers, female flowers, and leaf shape. Male flowers produced a small amount of pollen. Female flowers were formed, but they were sterile and aborted at an early stage. The genotype can be propagated by pollination of the normal plants, which in the next generation segregate into mutant—25% and normal—75%. The gene source is phenotyped according to the main characteristics of the fruits and the vegetation period. The mutation found cannot be directly used in a breeding program, but it is of interest for studying this important trait. The success of detecting flowers that are sterile depends on the number of watermelon plants, which, for the conditions of the experiment, amounted to a minimum of 4492 plants at a probability level of P3—0.95.

International Journal of Plant Biology doi: 10.3390/ijpb17010003

Authors: Gilberto Garcia Fernando Montero Maria Elena Torres Selwyn Alvarez Wildo Vasquez Abraham Villantoy Yoel Ruiz Fernando Escobal Hector Cántaro-Segura Omar Paitamala Daniel Matsusaka

Purple corn (Zea mays L.) is a nutraceutical crop of increasing economic importance in Peru, yet its productivity is highly influenced by genotype × environment (G × E) interactions across heterogeneous agro-ecological zones. Therefore, selecting suitable genotypes for specific environments is essential to optimize variety deployment and maximize site-specific yield. Five purple-maize genotypes (INIA-601, INIA-615, Canteño, PMV-581, and Sintético-MM) were evaluated in four contrasting Peruvian sites using a randomized complete-block design. Grain yield, field weight, anthesis–silking interval (ASI), plant height, and ear-rot incidence were analyzed with combined analysis of variance (ANOVA), the additive main effects and multiplicative interaction (AMMI), genotype and genotype-by-environment (GGE) biplots, Weighted Average of Absolute Scores (WAAS), weighted average of absolute scores and best yield index (WAASBY), and Y × WAAS indices. Environment accounted for 90.1% of field-weight variation (p < 0.0001) and 50.2% of grain-yield variation (p < 0.001), while significant G × E interactions (3.93% and 18.14%, respectively) justified bilinear modeling. AMMI1 and GGE “which-won-where” biplots identified INIA-615 and PMV-581 as broadly adapted, with INIA-615 achieving the highest WAASBY and positioning in quadrant IV of Y × WAAS (high yield, high stability). INIA-601 and Sintético-MM exhibited exceptional stability (low ASV) but moderate productivity; Canteño showed limited adaptability. Chumbibamba emerged as a key discriminating, high-productivity location. From an agronomic perspective, INIA-615 is recommended for high-productivity valleys such as Sulluscocha and Santa Rita, where its yield potential and stability are maximized. These findings underscore the potential of integrating multivariate stability metrics with physiological and disease-resistance traits to guide the selection of superior purple corn cultivars. Overall, INIA-615 represents a robust candidate for enhancing yield stability, supporting sustainable intensification, and expanding the nutraceutical value chain of purple corn in the Andean highlands.

International Journal of Plant Biology doi: 10.3390/ijpb17010002

Authors: Zhuldyz Batykova Aida Kistaubayeva Malika Abdulzhanova Gulina Doktyrbay Laila Saidullayeva Zhamila Baimirzayeva Moldir Turaliyeva Zhuldyz Ibraimova

The increasing environmental challenges facing modern agriculture necessitate development of sustainable, eco-friendly alternatives to chemical inputs. This study aimed to isolate and characterize rhizophilic bacterial strains from the rhizosphere of the maize hybrid Turan 480 SV (Zea mays L.), with a focus on their plant growth-promoting and biocontrol traits. A total of 23 bacterial isolates were obtained, including 15 Gram-negative and 8 Gram-positive strains. Among these, three strains—CR14, CR18 and CR22—were selected for detailed analysis. All three demonstrated significant indole-3-acetic acid (IAA) production, phosphate and zinc solubilization, nitrogen fixation and antifungal activity. CR14 synthesized 56.01 mg L−1 of IAA and demonstrated the highest zinc solubilization, while CR18 exhibited superior phosphate solubilization and protease activity. CR22 produced the highest IAA (61.46 mg L−1) and demonstrated strong cellulase and amylase activity. In antagonism tests, CR14 suppressed Alternaria alternata with an 80 mm inhibition zone, while CR18 and CR22 effectively inhibited both A. alternata and Fusarium graminearum. Phylogenetic analysis based on 16S rRNA sequencing identified CR18 as Serratia quinivorans, CR14 as Pantoea agglomerans and CR22 as Pantoea sp. The functional diversity of rhizobacteria holds promise as bioinoculants for enhancing maize growth and protecting against soil-borne pathogens in sustainable agriculture.

International Journal of Plant Biology doi: 10.3390/ijpb17010001

Authors: Isaac Theophile Ndjepel Yetnason Adrian Christopher Brennan Dorothy Tchatchoua Tchapda Chimene Abib Fanta

(1) Background: In the Sudano-Sahelian zone of Cameroon, which is affected by drought and forest decline, Vachellia nilotica leaves and seeds are fodder for livestock. (2) Methods: A provenance and progeny study on growth performance and heritability of V. nilotica was carried out to provide a reliable database for tree selection, improvement programs, and the creation of future forested areas in this region. Open-pollinated seeds from 120 mother trees (10 half-sib families per provenance) representing twelve provenances, 50–100 km apart, were used for a progeny trial near Maroua, the Far North region of Cameroon. The experimental design was a Fisher block. (3) Results: The results reveal significant differences among provenances only for the number of leaves, and the variability was marked by coefficients of variation ranging from 0.24−0.63. Narrow-sense heritability was measured, varying from 0.01 ± 0.009 to 0.74 ± 0.02, and genetic gain reached 21.83 at the selection intensity of 5% for the number of leaves per plant. The phenotypic coefficient of variation varied between 14% and 90%. Half-sib families were classified into three subgroups using hierarchical ascending classification, and provenances were grouped into five groups using principal component analysis. (4) Conclusions: These results could contribute to initiating tree selection, but more provenances, longer-term experiments, and molecular genetic testing are needed to complement these nursery-level observations.

International Journal of Plant Biology doi: 10.3390/ijpb16040142

Authors: Angel F. Huaman-Pilco Nicola Fiore Oscar P. Hurtado-Gonzales Larissa Carvalho Costa Xiaojun Hu Manuel Oliva-Cruz Jorge R. Díaz-Valderrama Alan Zamorano

Preserving Peruvian cacao germplasm requires preventing the spread of pathogens such as viruses, yet cacao viral diseases in Peru remain poorly studied. In this study, we characterized the viral sequences associated with native cacao trees from the department of Amazonas, northwestern Peru. Leaf samples from two symptomatic plants (mosaic, yellowing, leaf deformation) and one asymptomatic plant were collected from the cacao germplasm bank of the Universidad Nacional Toribio Rodríguez de Mendoza de Amazonas. RNA high-throughput sequencing identified four RNA segments consistent with the genus Emaravirus: RNA1 (7142 nt; replicase P1), RNA2 (2225 nt; glycoprotein P2), RNA3 (1269 nt; nucleocapsid P3), and RNA4 (1286 nt; movement protein P4), sharing 32.6–45.9% amino acid identity with European mountain ash ringspot-associated emaravirus (EMARaV). Phylogenetic analysis of P1–P4 proteins placed this virus in a distinct lineage, confirming it as a novel species, Theobroma cacao emaravirus A (ThCEV-A). Specific RT-PCR detected ThCEV-A in 11 additional accessions, with symptoms including yellow mosaic and mottling. This study documents for the first time the presence of a novel Emaravirus in cacao, highlighting the need to assess its epidemiology, vector(s), and potential impact on cacao production in its center of origin.

International Journal of Plant Biology doi: 10.3390/ijpb16040141

Authors: Rongrong Tan Long Jiao Peizhuo Wu Danjuan Huang Hongjuan Wang Xun Chen Yingxin Mao

The tea plant (Camellia sinensis (L.) O. Kuntze) is a globally important crop, yet its cultivation is continually challenged by a range of viral pathogens that can compromise plant health and product quality. In this study, eighteen symptomatic leaves were collected from the Hubei Province Tea Germplasm Resources Nursery, China, representing multiple cultivars and diverse genetic backgrounds. The samples were pooled into three groups and subjected to ribodepleted transcriptome sequencing. Analyses revealed a complex virome, with Tea plant necrotic ring blotch virus (TPNRBV) dominating Pools A and B, whereas Badnavirus betacolocalasiae was the most prevalent in Pool C. Functional enrichment of viral genes indicated involvement in multiple biological processes, including replication, host interaction, and metabolism. Notably, two previously uncharacterized viruses were identified: Tea plant-associated ourmia-like virus 1 (TeaOLV1) and Tea plant-associated rhabdo-like virus 1 (TeaRLV1). Phylogenetic reconstruction positioned TeaOLV1 within the Penoulivirus genus, while TeaRLV1 formed a distinct clade among plant-associated rhabdoviruses. Conserved motif analysis revealed typical viral domains, accompanied by lineage-specific variations in tea plants. Collectively, these findings enhance our understanding of the viral diversity in tea plants, provide refined taxonomic placement for newly identified viruses, and offer molecular insights into their evolutionary relationships and potential functional roles.

International Journal of Plant Biology doi: 10.3390/ijpb16040140

Authors: Ryan Koeth Shahzad Hussain Shah Calvin Juel Rigney Changbin Chen

Zingeria biebersteiniana, a grass species with the lowest known chromosome number among angiosperms (2n = 2x = 4), offers a distinctive platform for cytogenetic and grass research. Despite its unique karyotype and potential for molecular and educational applications, no transformation system has previously been reported for this species. Here, we establish a reproducible Agrobacterium tumefaciens-mediated transformation protocol for Z. biebersteiniana, optimized through comparative evaluation of three tissue culture media. A modified Khromov medium with Plant Preservative Mixture supported robust callus induction and plant regeneration, enabling the successful introduction of a GFP–mouse talin1 fusion construct driven by the rice Actin-1 promoter. Transgenic lines were validated via PCR amplification of the hygromycin resistance gene, and GFP signals were observed in transformed individuals. However, the expression pattern was less specific than previously reported in rice, potentially due to species-specific differences in mouse Talin1 protein localization. Although actin filament visualization in mature pollen remained unspecific, the protocol provides a foundational tool for future molecular and functional genomics and genetics studies. This work represents the first documented genetic transformation of Z. biebersteiniana, expanding its utility as a model system in plant biology and genomics.

International Journal of Plant Biology doi: 10.3390/ijpb16040139

Authors: Jamille Cardeal da Silva Jailton de Jesus Silva Raquel Araujo Gomes Claudinéia Regina Pelancani Cruz Barbara França Dantas

Commiphora leptophloeos, a native Caatinga species with economic and medicinal potential, faces propagation challenges due to seed dormancy and extractive use. The germination test, the official method for seed quality assessment, is time-consuming, whereas the tetrazolium test (TZT) offers a rapid alternative for determining seed viability. This study aimed to establish and validate a TZT protocol for C. leptophloeos seeds. Seeds collected in 2025 were extracted after natural fruit drying and then stored in a cold chamber. The germination test was conducted with seeds without pyrenes at 30 °C. For the TZT, a completely randomized design was used in a 6 × 4 factorial scheme (six TZT concentrations × four immersion times), with adjustments in seed preparation and staining procedures. Higher concentrations (0.5% and 0.75%) combined with shorter immersion periods (2 h) provided the best results, especially 0.75% for 2 h, which yielded 89% viability. Very low concentrations combined with short periods resulted in little or no staining. Compared with the germination test (35%), the TZT showed greater sensitivity in detecting viable seeds. We conclude that the TZT is highly efficient for assessing the viability of C. leptophloeos seeds, with optimal responses at 0.5–0.75% TTC and 2–4 h immersion periods, and represents a strategic tool to support the conservation and sustainable use of this species.

International Journal of Plant Biology doi: 10.3390/ijpb16040138

Authors: Alicia A. Ibarra-Moguel Marcos E. Cua-Basulto Alejandra González-Moreno Esaú Ruiz-Sánchez Jehú G. Noh-Kú Adrián I. Fernández-Basto René Garruña

The objective of this study is to evaluate the effects of botanical oils on the mortality of the phytophagous mite Tetranychus urticae, the predatory mite Amblyseius swirskii, and on gas exchange in papaya seedlings. Two vegetable oils (soybean and corn), two essential oils (lavender and oregano), a synthetic pesticide (abamectin), and a control (water) were evaluated on papaya seedlings infested with T. urticae. In laboratory assays, within the first day after application, abamectin caused 100% mortality of T. urticae adults, followed closely by soybean (96%), corn (94.7%), and lavender (94.7%) oils. In A. swirskii, abamectin caused 100% mortality within 24 h; at 72 h, corn and lavender oils reached 96%, while oregano oil caused the least mortality (67.3%). In field trials, both abamectin and botanical oils statistically reduced eggs per leaf 24 h after application relative to the control, and a similar pattern was observed for nymphs 48 h after treatment. Botanical oils equaled abamectin in T. urticae adult suppression by 72 h, and soybean caused complete adult mortality by day 14. Regarding gas exchange, abamectin significantly affected the photosynthesis and transpiration processes. Thus, botanical oils represent viable biorational options for managing T. urticae in papaya, with lower ecological and physiological costs than abamectin.

International Journal of Plant Biology doi: 10.3390/ijpb16040137

Authors: Hattie Hope Makumbe Theoneste Nzaramyimana Richard Kabanda George Fouad Antonious

Watercress is a nutrient-dense, aquatic leafy vegetable with significant public health and economic potential. Hydroponically cultivated watercress can offer greater nutritional benefits due to the controlled delivery of specific nutrients. From an agronomist’s perspective, watercress has the advantage of optimized environmental resource efficiency, achieved through reduced energy, chemical, and water consumption, as well as its short cultivation cycle. Glucosinolates (GSLs) in watercress enhance sustainable agriculture by naturally protecting crops from pests and diseases, reducing the need for chemical inputs. They also increase market value and shelf-life, supporting resource-efficient and profitable farming. Within the pharmaceutical space, GSLs are well-known for their chemo preventive and anti-inflammatory properties. This review aims to summarize research findings, critically evaluate existing studies to highlight current knowledge, and identify research gaps, and to guide future investigations. The synthesis of the reviewed literature demonstrates that increased sulphate generally improves GSL content. However, not many studies have looked specifically at how magnesium sulphate (MgSO4) affects watercress. This review highlights the specific impact of MgSO4 on GSL production in watercress, which could provide valuable insights for optimizing nutrient management in hydroponic systems and enhancing the health benefits of this nutrient-dense crop.

International Journal of Plant Biology doi: 10.3390/ijpb16040136

Authors: Gabriela Cárdenas-Huamán Henry Morocho-Romero Sebastian Casas-Niño Sandy Vilchez-Navarro Leslie D. Velarde-Apaza Max Ramirez-Rojas Juancarlos Cruz Flavio Lozano-Isla

Potato (Solanum tuberosum L.) is the third most important food crop worldwide and a cornerstone of food security across the Andean region. However, its production is increasingly threatened by the potato psyllid Bactericera cockerelli (Šulc), the vector of Candidatus Liberibacter solanacearum, the causal agent of the purple-top complex associated with zebra chip disease, which severely reduces both tuber yield and quality. This study was conducted from September 2024 to February 2025 in the province of Huancabamba, Peru, to evaluate the efficacy of biological and chemical control agents against B. cockerelli under field conditions. A randomized complete block design was implemented with five treatments and four replicates, totaling 20 experimental units, each consisting of 20 potato plants (S. tuberosum L.), of which 10 plants were evaluated. Treatments included an untreated control (T0), a chemical control (thiamethoxam + lambda-cyhalothrin, abamectin, and imidacloprid) (T1), and three biological control agents: Beauveria bassiana CCB LE-265 (>1.5 × 1010 conidia g−1) (T2), Paecilomyces lilacinus strain 251 (1.0 × 1010 conidia g−1) (T3), and Metarhizium anisopliae (1.0 × 1010 conidia g−1) (T4). Foliar applications targeted eggs, nymphs, and adults of the psyllid. Results indicated that B. cockerelli mortality across developmental stages was lower under biological treatments compared with T1, which achieved the lowest probability of purple-top symptom expression (46%) and a zebra chip incidence of 60.60%. Among the biological agents, M. anisopliae (T4) reduced incidence to 56.60%, while P. lilacinus (T3) demonstrated consistent suppression of nymphal populations. In terms of yield, T1 achieved the highest tuber weight (198.86 g plant−1) and number of tubers (7.74 plant−1), followed by T3 (5.08) and T4 (4.24). Nevertheless, all treatments exhibited low yields and small tuber sizes, likely due to unfavorable environmental conditions and the presence of the invasive pest. Overall, chemical control was more effective than biological agents; however, the latter showed considerable potential for integration into sustainable pest management programs. Importantly, vector suppression alone does not guarantee the absence of purple-top complex symptoms or zebra chip disease in potato tubers.

International Journal of Plant Biology doi: 10.3390/ijpb16040135

Authors: Wagner Meza-Maicelo César R. Balcázar-Zumaeta Henry W. Santillan Culquimboz Manuel Oliva-Cruz Flavio Lozano-Isla

Common bean (Phaseolus vulgaris L.) is a cornerstone of global food security, yet its production is persistently challenged by biotic and abiotic stresses. This study conducted a bibliometric analysis following PRISMA guidelines on 549 documents published between 1971 and mid-2025, using Biblioshiny, VOSviewer, and CiteSpace. Results reveal a scientific output concentrated in leading institutions such as Michigan State University (MSU, USA) and the International Center for Tropical Agriculture (CIAT, Colombia). Collaboration networks are dominated by influential authors including Beebe, S. and Kelly, J.D., with Euphytica and Crop Science emerging as primary publication outlets. Research trends highlight salinity tolerance, oxidative stress, and chromosomal mapping, where advanced technologies such as SNP chips have supplanted RAPD markers. Critical challenges remain, including limited phenotyping capacity and the complexity of polygenic resistance, with urgent implications for developing countries where beans are vital for food security but face barriers to technology adoption and restricted participation in global research networks. Concurrently, mitigation strategies have shifted toward sustainable approaches, incorporating beneficial microorganisms for biotic stress and bio-stimulants or plant extracts for abiotic stress. Since 2020, the field has increasingly embraced multifunctional strategies leveraging natural mechanisms to enhance crop resilience. This analysis offers a comprehensive knowledge base to guide future research agendas.

International Journal of Plant Biology doi: 10.3390/ijpb16040134

Authors: Sebastian Casas-Niño Sandy Vilchez-Navarro Henry Morocho-Romero Gabriela Cárdenas-Huamán Esdwin-Oberti Nuñez-Ticliahuanca Ana-Gabriela Montañez-Artica Leslie Velarde-Apaza Max Ramirez Rojas Juan Carlos Rojas Flavio Lozano-Isla

Mango (Mangifera indica L.) is a tropical fruit tree characterized by vigorous growth and high fruit production, making it one of Peru’s main export crops. However, its extensive vegetative development requires substantial space, limiting productivity per unit area. This study evaluated the effects of rootstock and interstock combinations on agronomic traits and fruit biometrics, highlighting the potential of interstocks to modulate tree vigor in mango orchards of Peru’s dry forest region. A total of 216 trees were established using ‘Chulucanas’ and ‘Chato’ as rootstocks and ‘Chulucanas,’ ‘Chato,’ ‘Irwin,’ and ‘Julie’ as interstocks, apically grafted with the ‘Kent’ cultivar, with a spacing of 6.0 m × 6.0 m. Tree performance was assessed after 10 years during the 2017–2019 growing seasons in Piura, Peru, under a randomized complete block design (2 × 4 factorial). The combination of the ‘Chulucanas’ rootstock with ‘Chulucanas’ and ‘Julie’ interstocks reduced tree height by 10.94% and 11.70%, respectively, facilitating orchard management and potentially increasing planting density. Yield varied significantly among growing seasons, with a 15% reduction in 2017 attributed to El Niño–Southern Oscillation (ENSO)-related increases in temperature and rainfall that affected flowering and fruit set. These results underscore the importance of cultivar selection and climate-adaptive strategies to sustain mango productivity in regions prone to climatic variability.

International Journal of Plant Biology doi: 10.3390/ijpb16040133

Authors: Rotondwa Rabelani Sinthumule Charlie Sithole Joseph Lesibe Gaorongwe Kegomoditswe Martha Matebele Oziniel Ruzvidzo Tshegofatso Bridget Dikobe

Maize is not only a staple across the sub-Saharan Africa (SSA) region but also a substantially economically valuable cereal crop. As a seasonal crop, its successful cultivation depends on favorable rainfall patterns and climatic conditions. However, environmental stresses such as drought limit its productivity. Enhancing stress resilience requires understanding the morphological, physiological, and proteomic response mechanisms that contribute to drought tolerance. Hence, it is critical to understand its adaptive capacity at the protein level to achieve improved stress-tolerant cultivars and increased yields in the future. Our study investigated drought stress responses in a drought-tolerant maize cultivar subjected to polyethylene glycol (PEG)-induced water deficit, combining one-dimensional gel electrophoresis (1DE) with LC-MS/MS to profile the leaf proteome. From the analysis, 50 of the 439 identified maize leaf proteins were further studied due to their significant differential expression and functional relevance, revealing the interconnection between the proteomic patterns as well as the morphological and physiological responses that enable drought resilience. These insights provide a foundation for improving stress-tolerant maize cultivars through integrative characterization approaches.

International Journal of Plant Biology doi: 10.3390/ijpb16040132

Authors: Isaac O. Abegunde Oghenevwairhe P. Efekemo Olabode Onile-Ere Folashade Otitolaye Olusegun A. Oduwaye Thomas O. Fabunmi Emmanuel O. Idehen Justin S. Pita Fidèle Tiendrébéogo Titus Alicai Angela O. Eni

Understanding the genetic variability among Nigerian cassava accessions is a crucial prerequisite for its improvement. The objective of this study was to estimate the genetic variability among 477 cassava accessions and to classify them based on their genetic similarities for effective utilization in breeding programs. The accessions were evaluated at the Federal University of Agriculture, Abeokuta experimental site from 2023–2024, using an augmented randomized complete block design with two checks (TME 419 and NR 87184). Agromorphological descriptors were collected at 3-month intervals for 12 months. Broad sense heritability and genetic advance as percent of mean (GAM) were high, indicating that the overall phenotypic expressions observed were largely influenced by genetic factors. Multiple correspondence analysis (MCA) showed that petiole color, number of leaf lobes, color of leaf veins, and parenchyma contributed the most to the overall variability observed in the study population. Principal component analysis (PCA) identified petiole length, length of leaf lobe, width of leaf lobe, and plant height as primary contributors to the overall phenotypic variations observed in the population. Hierarchical clustering of accessions using Euclidean distance revealed two and three clusters based on qualitative and quantitative traits respectively. This study has shown the existence of wide genetic variations in several cassava traits, providing a valuable resource for breeding programs.

International Journal of Plant Biology doi: 10.3390/ijpb16040131

Authors: Md. Jahirul Islam Byung Ryeol Ryu Tanjina Alam Masuma Akter Mou Md. Hafizur Rahman Md. Abdus Salam Young-Seok Lim Mohammad Anwar Hossain

Salinity stress is a major constraint on the growth and productivity of sugar beet (Beta vulgaris L.). This study evaluated the potential of exogenously applied putrescine (Put) and salicylic acid (SA) to enhance salt stress tolerance. Thirty-day-old seedlings were grown for seven days under control conditions before being subjected to eight treatments for 10 days: (i) Control, (ii) Control + 0.6 mM Put, (iii) Control + 0.6 mM SA, (iv) Control + 0.6 mM Put + 0.6 mM SA, (v) Salinity (150 mM NaCl), (vi) Salinity + 0.6 mM Put, (vii) Salinity + 0.6 mM SA, and (viii) Salinity + 0.6 mM Put + 0.6 mM SA. Put and SA were applied once as a foliar spray at the onset of the treatments. Salt stress significantly reduced plant growth, biomass, chlorophyll content, and photosynthetic efficiency, while increasing reactive oxygen species (particularly H2O2) and lipid peroxidation. Foliar applications of Put and SA alleviated these adverse effects, either individually or in combination. Put primarily enhanced plant growth rate, shoot length, plant height, shoot and root biomass, leaf relative water content, respiration activity, and sucrose accumulation. SA improved root length, photosynthetic activity, water-use efficiency, and proline accumulation. When applied together, Put and SA combinedly increased growth rate, shoot length, plant height, shoot biomass, leaf relative water content, stomatal conductance, and the maximum quantum yield of PSII, while more prominently reducing malondialdehyde and H2O2 accumulation and enhancing antioxidant enzyme activities. These findings suggest that foliar application of Put and SA enhances salinity tolerance in sugar beet seedlings by improving antioxidant enzyme activities, osmolyte accumulation, and ion homeostasis, thereby mitigating oxidative stress under saline conditions. This outcome could contribute to potential applications in breeding programs and stress management in saline-prone regions.

International Journal of Plant Biology doi: 10.3390/ijpb16040130

Authors: Floris C. Breman Joost Korver Ronald Snijder M. Eric Schranz Freek T. Bakker

Following publication, concerns were raised to the Editorial Office relating to a potential conflict of interest between one of the authors and the Academic Editor that supervised the peer-review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040129

Authors: Abdullateef Mustapha Abdul Hakeem Shaonan Li Ghulam Mustafa Essam Elatafi Jinggui Fang Cunshan Zhou

Salinity is a long-standing global environmental stressor of terrestrial agroecosystems, with important implications for viticulture sustainability, especially in arid and semi-arid environments. Salt-induced physiological and biochemical disruptions to grapevines undermine yield and long-term vineyard sustainability. This review aims to integrate physiological, molecular, and omics-based insights to elucidate how grapevine rootstocks confer salinity tolerance and to identify future breeding directions for sustainable viticulture. This review critically assesses the ecological and molecular processes underlying salt stress adaptation in grapevine (Vitis spp.) rootstocks, with an emphasis on their contribution to modulating scion performance under saline conditions. Core adaptive mechanisms include morphological plasticity, ion compartmentalization, hormonal regulation, antioxidant defense, and activation of responsive genes to stress. Particular emphasis is given to recent integrative biotechnological developments—including transcriptomics, proteomics, metabolomics, and genomics—that reveal the intricate signaling and regulatory networks enabling rootstock-mediated tolerance. By integrating advances across eco-physiological, agronomic, and molecular realms, this review identifies rootstock selection as a promising strategy for bolstering resilience in grapevine production systems confronted by salinization, a phenomenon increasingly exacerbated by anthropogenic land use and climate change. The research highlights the value of stress ecology and adaptive root system strategies for alleviating the environmental consequences of soil salinity for perennial crop systems.

International Journal of Plant Biology doi: 10.3390/ijpb16040128

Authors: Milena Maria Tomaz de Oliveira Noemi Tel-Zur Francisca Gislene Albano-Machado Daniela Melo Penha Monique Mourão Pinho Marlos Bezerra Maria Raquel Alcântara de Miranda Carlos Farley Herbster Moura Ricardo Elesbão Alves William Natale Márcio Cleber de Medeiros Corrêa

Hylocereus species are promising for enhancing fruit productivity in arid regions, but high solar radiation often leads to yield loss. This study aimed to evaluate the short-term impact of different shading levels on the physiological performance, productivity, and post-harvest quality of Hylocereus costaricensis under semi-arid conditions. Plants were grown in the field under two shade levels, i.e., 35 and 50% and their performances were compared to plants under control, i.e., 0% of shade or full sunlight. The nighttime CO2 assimilation and productivity increased significantly by 310.5 and 114.6% and 34.3 and 50.14% for plants under 35 and 50% of shade, respectively, compared to the control. A Principal Component Analysis (PCA) revealed that shade enhanced skin betalain (BETS) and phenolic content (PETP), whereas non-shaded plants expressed traits more closely associated with plant and fruit photoprotective pigment synthesis, i.e., total carotenoids and yellow flavonoids, respectively, along with total sugar accumulation, underscoring the significant impact of shading on both metabolic activity and overall agronomic outcomes. Shading within the 35% to 50% range is effective to cope with high solar radiation by improving photosynthetic capacity, productivity, and post-harvest quality, especially regarding the accumulation of pigments such as betalains, indicating that shade as an agro-technique is a valuable approach for the cultivation of Hylocereus species in dryland regions.

International Journal of Plant Biology doi: 10.3390/ijpb16040127

Authors: Alexandra Pacheco-Andrade María Elena Torres Hector Cántaro-Segura Luis Díaz-Morales Daniel Matsusaka

Durum wheat (Triticum durum Desf.) underpins semolina value chains in water-limited regions, yet Peru remains import-dependent due to constrained local adaptation. We evaluated eleven elite lines plus the commercial variety ‘INIA 412 Atahualpa’ across three contrasting semi-arid sites in Arequipa (Santa Elena, San Francisco de Paula, Santa Rita) during 2023–2024 to identify genotypes maximizing performance and stability. Grain yield, thousand-kernel weight (TKW), hectoliter weight, and plant height were analyzed with combined analysis of variance (ANOVA), the additive main effects and multiplicative interaction (AMMI) and genotype and genotype-by-environment (GGE) biplots, complemented by AMMI stability value (ASV) and weighted average of absolute scores and best yield index (WAASBY). Grain yield and hectoliter weight showed significant genotype × environment (G × E) interaction, while plant height was driven mainly by genotype and environment with limited interaction. For grain yield, AMMI (PC1: 55.2%) and GGE (PC1 + PC2: 90.2%) revealed crossover responses and three practical mega-environments: TD-053 “won” at San Francisco de Paula, TD-037 at Santa Elena, and TD-033 at Santa Rita. Additionally, WAASBY-integrated rankings favored TD-033 (93.7%) and TD-014 (84.72%), followed by TD-026/TD-020 (>57%), whereas TD-062 (9.1%) and TD-043/TD-061 underperformed. Quality traits highlighted TD-044 and TD-014 for high hectoliter weight and TD-014/TD-062 for high TKW with contrasting stability. Overall, TD-033 and TD-014 were adaptable across environments, providing selection guidance to strengthen Peru’s durum breeding pipeline under climate variability.

International Journal of Plant Biology doi: 10.3390/ijpb16040126

Authors: Katia Spinella Lorenza Dalla Costa Davide La Rocca Sara Ciuffa Daniela Verginelli Umar Shahbaz Pierre Videau Olivier Zekri Ugo Marchesi

In recent years, CRISPR-Cas9 technology has become a powerful and indispensable tool for targeted mutagenesis in plants, including applications such as gene knockout, prime-editing, multiplex gene editing, and regulation of gene transcription. As the number of potential genome editing approaches expands at a very fast pace, rapid, efficient, and cost-effective analytical strategies are needed to screen large numbers of mutants, including the detection of off-target events. In this study, we reported a detection method based on High-Resolution Melting (HRM) analysis to discriminate between wild-type (wt) and edited lines of different varieties of Vitis vinifera and grapevine rootstocks. Those edited lines were obtained through Agrobacterium tumefaciens mediated transformation of embryogenic calli using the CRISPR/SpCas9 system and targeting VviEPFL9-1 and VviEPFL9-2, two paralogous genes involved in stomata cell fate induction. The method clearly distinguished between the wt allele and the mutated one and was partially effective in distinguishing different types of mutation. Moreover, HRM data elaboration based on a Principal Component Analysis (PCA) allowed one to group populations of lines which originated from the same transformation event. Our study demonstrates the reliability of HRM as a fast and cost-effective diagnostic tool for the screening of edited lines and the evaluation of off-target events.

International Journal of Plant Biology doi: 10.3390/ijpb16040125

Authors: Joanna N. Kalatskaja Natallia V. Baliuk Katsiaryna I. Rybinskaya Kanstantsin M. Herasimovich Ninel A. Yalouskaya Lubov G. Yarullina Vyacheslav O. Tsvetkov

Following publication, concerns were raised to the editorial office relating to a potential conflict of interest between the authors and the Academic Editors that supervised the peer-review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040124

Authors: Edgard Augusto de Toledo Picoli Weverton Gomes da Costa Josimar dos Santos Ladeira Franciely Alves Jacomini Maria Naruna Felix Almeida Alaina Anne Kleine Graziela Baptista Vidaurre Jordão Cabral Moulin Kelly M. Balmant Paulo Roberto Cecon Edival Ângelo Valverde Zauza Lucio Mauro da Silva Guimarães

Eucalyptus plantation forests play an important role in the global trade balance, and have been challenged with the Eucalypt Physiological Disorder (EPD) exhibiting symptoms on barks. Despite of that, there is little information on the anatomical features of phloem and periderm associated with this disorder. Although tolerant and susceptible commercial clones exhibited similar anatomical structures, they differed in the proportions of conducting and total phloem tissue and the amount of phloem containing Calcium oxalate (CaOx) crystals. The frequency and diameter of sieve tube elements (STEs) also varied among the tested clones. The increased area of phloem with non-collapsed STE and CaOx crystals were linked to the EPD tolerant phenotype. Bark, secondary phloem, and periderm thickness were correlated with EPD scores. Structural characteristics of phloem cells is correlated with increasing stem diameter. Bark and phloem thickness exhibited significant and positive associations with EPD-tolerant clones and stem diameter, while negative correlations with EPD scores. These connections corroborate the positive impact of increasing the proportion of total phloem thickness on stem diameter growth and EPD tolerance. The present results were based on restricted, yet commercially important, Eucalyptus species (E. grandis, E. urophylla and E. grandis × E. urophylla hybrids) highlighting bark and phloem traits linked to plant growth and EPD tolerance.

International Journal of Plant Biology doi: 10.3390/ijpb16040123

Authors: Shimaa Hosny Gaber Ahmed H. A. Mansour Ghada Abd-Elmonsef Mahmoud Mohamed Hefzy

This study aims to identify the most effective irrigation rates for Manfalouty pomegranate trees to enhance their growth, yield, bioactive compound content, and fruit quality. Additionally, the research evaluates the effects of foliar spray applications of glycine, ascorbic acid, and riboflavin on the physiological responses of the trees. Morphological, physiological impacts, and fruit quality treatments were analyzed using Pearson correlation and cluster analysis. As irrigation levels were reduced up to 60%, all vegetative characters demonstrated a significant drop. Glycine treatment enhanced yielding shoot lengths, leaf area, and leaf number. Among the key findings was that there were no appreciable variations between 100% ETc and 80% ETc with riboflavin or glycine spraying for leaves total chlorophyll. Leaves treated with glycine, ascorbic acid, and riboflavin spraying had higher levels of total antioxidants, total phenols, and total flavonoids, while glycine gives the highest results and enhanced the antioxidant system of pomegranate leaves. Reducing irrigation from 100% to 60% ETc in both seasons, respectively, resulted in a progressive decrease in yield (ton/fed.), and fruit creaking (%); this effect was overcome using the glycine foliar spraying. The results also demonstrated that all spray treatments reduced the cracking rate, with the glycine spray treatment being the most effective in this respect that enhanced also fruit length, fruit diameter, fruit weight, and arils weight %, total soluble solids, total sugar, anthocyanin, vitamin C, and the antioxidant contents. The findings provide valuable insights for sustainable pomegranate cultivation practices that maximize productivity and quality while maintaining plant health using low irrigation and glycine as foliar sprayer.

International Journal of Plant Biology doi: 10.3390/ijpb16040122

Authors: Unius Arinaitwe Dalitso Noble Yabwalo Abraham Hangamaisho

The escalating challenges of climate change, soil degradation, and the need to ensure global food security are driving the transition towards more sustainable agricultural practices. Biostimulants, a diverse category of substances and microorganisms, have emerged as promising tools to enhance crop resilience, improve nutrient use efficiency (NUE), and support sustainable intensification. However, their widespread adoption is hampered by significant variability in efficacy and a lack of consensus on their optimal use. This comprehensive review synthesizes current scientific knowledge to critically evaluate the performance of biostimulants within sustainable agricultural systems. It aims to move beyond isolated case studies to provide a holistic analysis of their modes of action, efficacy under stress, and interactions with the environment. The analysis confirms that biostimulant efficacy is inherently context-dependent, governed by a complex interplay of biological, environmental, and management factors. Performance variability is explained by four core principles: the Limiting Factor Principle, the Biological Competition Axiom, the Stress Gradient Hypothesis, and the Formulation and Viability Imperative. A significant disconnect exists between promising controlled-environment studies and variable field results, highlighting the danger of extrapolating data without accounting for real-world agroecosystem complexity. Biostimulants are not universal solutions but are sophisticated tools whose value is realized through context-specific application. Their successful integration requires a precision-based approach aligned with specific agronomic challenges. We recommend that growers adopt diagnostic tools and on-farm trials, while producers must provide transparent multi-location field data and invest in advanced formulations. Future research must prioritize field validation, mechanistic studies using omics tools, and the development of crop-specific protocols and industry-wide standards to fully unlock the potential of biostimulants for building resilient and productive agricultural systems.

International Journal of Plant Biology doi: 10.3390/ijpb16040121

Authors: Leandro Sousa e Silva César Augusto Ticona-Benavente

Cocona (Solanum sessiliflorum Dunal) is an underutilized Amazonian fruit species with significant food, nutritional, and economic potential, but its genetic improvement remains limited. This study aimed to estimate the heritability of 13 morpho-agronomic traits in two F2 populations, assess the efficiency of early visual selection, and identify traits associated with fruit yield. Approximately 250 plants from each population were grown in the Central Amazon. One week before the first harvest, plants were visually screened for yield potential, and the selected individuals were further evaluated for fruit traits. Broad-sense heritability (h2) was significant for most traits; the highest values were for number of flowers per plant (h2 = 0.88), petiole length (h2 = 0.87), collar diameter (h2 = 0.71), canopy diameter (h2 = 0.58), and fruit length (h2 = 0.55). Early visual selection achieved ~65% efficiency. Fruit yield was correlated strongly and positively with the number of fruits per plant. These results indicate that phenotypic selection is effective for improving key plant and fruit traits in cocona. Early visual selection can be used to identify high-yielding individuals and the number of fruits per plant can be used as a complementary criterion to enhance selection accuracy for fruit yield.

International Journal of Plant Biology doi: 10.3390/ijpb16040120

Authors: Rodrigo Gonzales César Augusto Ticona-Benavente José Ramirez-Chung Johnny Campos-Cedano José Jesús Tejada-Alvarado

This study evaluated the suitability of three floodplain environments near Iquitos for cowpea cultivar recommendations and estimated the adaptability and phenotypic stability of 12 cowpea lines evaluated in 2004. Climatic conditions between 2004 and 2020–2024 were also compared. Three field trials used a randomized complete block design with 12 lines and two replications, assessing grain yield, number of pods per plant, days to flowering, days to 50% maturity, and days to harvest. Combined Analysis of Variance (ANOVA), Duncan’s means test, Genotype + Genotype Environment Interaction (GGE) biplot, and Additive Main Effects and Multiplicative Interactions Interaction (AMMI) analyses revealed that the three sites are contrasting. The Annicchiarico index, GGE biplot, and AMMI analyses identified line CAR 3010 as having superior adaptability and stability. Paired t-tests and Mann–Kendall analyses showed that climatic conditions in 2020–2024 differed significantly from 2004. Therefore, Muyuy, Rafael Belaunde, and San Miguel are suitable locations for testing advanced cowpea lines prior to cultivar recommendation. Line CAR 3010 is recommended for breeding programs in the Peruvian Amazon in response to ongoing climate change. This research addresses a critical knowledge gap as the first study evaluating cowpea adaptability and stability across multiple floodplain locations in the Peruvian Amazon.

International Journal of Plant Biology doi: 10.3390/ijpb16040119

Authors: Maltase Mutanda Sandiswa Figlan

Wheat production and grain quality are adversely affected by drought stress. The deployment of wheat genotypes with improved grain yield and grain quality assists in achieving food security and maintaining a balanced diet. Therefore, this study is aimed at evaluating the phenotypic traits and grain quality responses of wheat genotypes to drought-stressed conditions. Two field trials were conducted to evaluate ten wheat genotypes under drought-stressed (DS) and non-stressed (NS) conditions in 2022 and 2023. The grains of the genotypes were further evaluated for their quality. The recorded phenotypic traits include grain yield (GY), shoot biomass (SB), root biomass (RB), and harvest index (HI). The grain quality traits recorded were grain carbon content (C), nitrogen (N), and crude protein (CP). Significant (p < 0.05) genetic variation were observed for the recorded phenotypic and grain quality traits. The highest grain yield was recorded in LM48 (495.83 g m−2), and the least was observed in BW141 (131.48 g m−2) under DS conditions. The N ranged from 1.76% recorded in LM75 to 3.16% (BW141) under DS conditions. The wheat genotypes, LM48 and BW140, presented high harvest index percentages, which indicates that the genotypes were efficient in partitioning their biomass to GY production even under DS conditions. The overall mean values of C and CP were lower under DS than NS conditions. Furthermore, GY was positively associated with SB (r = 0.50 under DS; r = 0.49 under NS) and RB (r = 0.38 under DS conditions; r = 0.32 under NS conditions). Amongst all the evaluated quality traits, only CP was negatively correlated with GY (r = −0.02) under DS conditions. Based on high GY production performance under DS conditions, the wheat genotypes LM48 and BW140 are recommended for further evaluation across diverse environments and production under limited water conditions.

International Journal of Plant Biology doi: 10.3390/ijpb16040118

Authors: Astra Jēkabsone Una Andersone-Ozola Lidia Banaszczyk Gederts Ievinsh

Soil mineral nutrient heterogeneity is a distinctive characteristic of coastal habitats, yet its impact on plant growth and development remains uncertain. The objective of the present study was to establish an experimental system for evaluating the influence of mineral nutrient availability on the development of three distinct short-lived wild coastal plant species: Phleum arenarium, Plantago coronopus, and Ranunculus sceleratus. These plants were cultivated in containers of different volumes employing an inert substrate with varying proportions of commercial garden soil in controlled conditions. Low mineral nutrient concentration served as a factor inhibiting plant vegetative growth for both P. arenarium and R. sceleratus plants, albeit with a substrate volume-dependent effect. In contrast, P. coronopus exhibited relatively low root biomass and exhibited minimal susceptibility to alterations in mineral nutrient concentration. Conversely, proportional allocation to roots decreased with increasing mineral nutrient concentration, mirroring the pattern observed for P. arenarium. Notably, for R. sceleratus, this effect was pronounced only at a high substrate volume. Furthermore, allocation to roots decreased with increasing substrate volume, but this occurred only at a high mineral nutrient concentration. The substrate, similar to that in coastal habitats, incorporated quartz sand with varying proportions of mineral-rich organic matter, providing comparable plant-available mineral concentrations for analyzing the effects of nutrient concentration, substrate volume, and genetic variability on plant growth and development. For future experiments, a wider range of mineral concentrations and more individual concentrations should be used to assess mineral availability more realistically.

International Journal of Plant Biology doi: 10.3390/ijpb16040117

Authors: Galina Kolomeitseva Vladimir Koval Andrey Ryabchenko

Following publication, concerns were raised to the editorial office relating to a potential conflict of interest between the authors and the Academic Editor that supervised the peer review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040116

Authors: Yong Zhang Peng Han Xuefeng Xiao Wei Chen Hang Liu Hengfeng Zhang Lu Xu

Blue fescue (Festuca glauca) is a widely used ornamental grass worldwide. Drought is an important limiting factor for the growth and development of blue fescue; therefore, cultivating new strains of blue fescue with a strong drought tolerance is of great significance for its production practice. To investigate the drought tolerance mechanism of ds-1, this study subjected both ds-1 and “Festina” to a natural drought treatment and measured their physiological and biochemical indicators. A transcriptomic analysis was also conducted to explore the underlying molecular mechanisms. The results showed that, after the drought treatment, the relative water content (RWC), water use efficiency (WUE), and photosynthetic rate (Pn) of ds-1 leaves were significantly higher than those of “Festina”; in addition, the contents of H2O2 and O2−, the relative electrical conductivity (REC), the malondialdehyde (MDA) content, the gas conductance (Gs), and the transpiration rate (Tr) were significantly lower than those of “Festina”. The peroxidase (POD) activity of ds-1 was significantly higher than that of “Festina”, while the superoxide dismutase (SOD) activity of ds-1 was significantly lower than that of “Festina”. The transcriptome data analysis showed that there were a total of 9475 differentially expressed genes (DEGs) between ds-1 and “Festina”. A Venn plot analysis showed 692 DEGs between ds-1—8d vs. “Festina”—8d and ds-1—16d vs. “Festina”—16d. A KEGG enrichment analysis showed that these 692 genes were mainly enriched in 86 pathways, including those related to the photosynthesis antenna protein, plant hormone signal transduction, MAPK signaling, starch and sucrose metabolism, and arginine and proline metabolism. Further screening identified genes that may be associated with drought stress, including PYL, PP2C, SnRK2, ABF, BRI1, JAZ, MYC2, Lhc, and MPK6. The qRT-PCR results indicated that the expression trends of the DEGs were consistent with the transcriptome sequencing results. Our research results can provide a basis for exploring candidate genes for drought tolerance in blue fescue. In addition, our research results provide valuable genetic resources for the development of drought-resistant ornamental grass varieties, which can help reduce water consumption in cities and decrease labor and capital investment.

International Journal of Plant Biology doi: 10.3390/ijpb16040115

Authors: Miriam Elizabeth Martínez-Pérez Dámaris Leopoldina Ojeda-Barrios Rafael Ángel Parra-Quezada Juan Luis Jacobo-Cuéllar Brenda I. Guerrero Esteban Sánchez-Chávez Teresita de Jesús Ruíz-Anchondo

Excess sodium in soil disrupts ionic balance and limits water uptake, negatively affecting growth and stolon production in strawberry plants. This study assessed the effects of chitosan (CTS), brassinosteroids (BRs), and thidiazuron (TDZ) on stolon performance and physiological responses of strawberry cv. ‘Portola’ under saline conditions. A greenhouse experiment included seven treatments: CTS, BRs, CTS + BRs combinations, TDZ, and an untreated control. Foliar applications were used to evaluate impacts on nutrient uptake, photosynthetic pigments, oxidative stress, and stolon production. BRs alone [2.53 × 10−6 μM] significantly increased crown diameter (+43%), stolon number (+65%), stolon length (+4%), and daughter plant formation (+8%), while reducing leaf sodium by 60% and improving Mg2+/Na+ and K+/Na+ ratios. The CTS + BRs combination enhanced phenolic content and produced the heaviest first daughter plants (6.1 g). TDZ, however, resulted in weaker stolons, lower chlorophyll a content, and reduced K+/Na+ ratios, suggesting a need for dose optimization. Overall, BRs, alone or with CTS, improved salt tolerance and stolon propagation through enhanced ion regulation, photosynthesis, and antioxidant defenses. These findings advance understanding of how biostimulants modulate metal ion homeostasis, antioxidant signaling, and growth in salt-sensitive crops, offering strategies to mitigate salinity stress in strawberry cultivation.

International Journal of Plant Biology doi: 10.3390/ijpb16040114

Authors: Aggrey Keya Osogo Shrabana Sarkar Francis Muyekho Hassan Were Patrick Okoth

The common bean (Phaseolus vulgaris L.) is a vital food crop worldwide, particularly in Latin America, Asia, and Sub-Saharan Africa, due to its high levels of protein, fiber, and essential nutrients. However, it is susceptible to viral infections, especially from the Bean common mosaic virus and Bean common mosaic necrosis virus. While previous research has primarily focused on specific resistance genes, a broader understanding of the plant’s overall immune response remains limited. To investigate this, a study was conducted involving 51 infected leaf samples. RNA was extracted, and deep metatranscriptomic sequencing was performed using the Illumina MiSeq platform. The results indicated that several genes related to stress response, nitrogen metabolism, and biosynthesis pathways were activated during infection. Key defense mechanisms included pathogen recognition, the production of antimicrobial peptides, and changes in metabolic activity. The Mitogen-Activated Protein Kinase (MAPK) signaling pathway and enzymes like glycosyl transferases, which aid in building protective structures, played a significant role. These findings suggest that the bean’s defense system is complex and involves not only direct attacks on pathogens but also metabolic shifts and microbial interactions. Understanding these processes provides valuable insights for breeding stronger, disease-resistant, and climate-resilient bean varieties.

International Journal of Plant Biology doi: 10.3390/ijpb16040113

Authors: Keletso Makaota Thabiso Michael Mokotjomela Caswell Munyai Thembelihle Joyce Mbele Nontembeko Dube

Using the biometric differences (i.e., plant physical characteristics) between the C. pallida populations previously treated with herbicide and those of the untreated populations, we tested the prediction that herbicidal treatment suppresses C. pallida plant growth in South Africa, where invasive cacti display high resilience to herbicide treatment. We also determined whether the surrounding communities knew of C. pallida invasion and whether they experienced any negative impacts. Overall, biometric analyses supported the study’s prediction because C. pallida plant height in treated populations was significantly lower than in untreated populations and before treatment. The average plant height of populations not treated with herbicide (i.e., experimental control) and those measured before treatment were not significantly different, but both were significantly greater than the heights of populations previously treated with herbicide. Similarly, the mean number of fruits, cladodes and juveniles per C. pallida plant treated with herbicide was significantly lower than in the untreated populations. We found a significant positive correlation between all measured parameters and C. pallida plant height. Out of 39 participants, 16 (41.0%) confirmed C. pallida presence in and around their properties, with 21 (53.9%) participants having experienced negative impacts directly and indirectly through fatal injuries on pets and livestock in the sampled sites. We confirmed the effectiveness of herbicide in suppressing the invasion of C. pallida and that people experience substantial negative impacts in areas where the species has established.