International Journal of Plant Biology doi: 10.3390/ijpb17050040

Authors: Vijay Rupa Naser A. Anjum Asim Masood Nafees A. Khan

Soil salinity as a major abiotic stressor has significantly affected crop production worldwide. However, plants have developed complex signaling networks that enable them to adapt and cope with such environmental shifts. Recent research has demonstrated the involvement of hydrogen sulfide (H2S) in signaling cascades that link plant development with stress tolerance management. Similarly, glutathione (GSH), a non-enzyme antioxidant, and a vital tripeptide, has been found to protect plants from oxidative damage and regulate metabolic functions under abiotic stress. As a potential scavenger of ROS, GSH maintains cellular redox homeostasis through the ascorbate-GSH cycle and acts as a signaling molecule for the sulfur-status of plants. This review focusses on: (i) revisiting the concept and current status of soil salinity; (ii) highlighting its impact at cellular and whole-plant levels; (iii) elucidating the role of a H2S and GSH in plant salt stress tolerance; and (iv) exploring the potential interactive roles of H2S and GSH in mitigating salinity impacts. This review will provide valuable insights into the complex network involving H2S and GSH, suggesting pathways for developing climate-resilient crops.

International Journal of Plant Biology doi: 10.3390/ijpb17050039

Authors: Anna Paula Marques Cardoso Walter Esfrain Pereira Juliane Maciel Henschel Diego Silva Batista Francisco Thiago Coelho Bezerra Maria Alaíne da Cunha Lima Gleyse Lopes Fernandes de Souza Patricia da Assunção Macedo Thayná Kelly Formiga de Medeiros Adailson Túlio dos Santos Silva Edmilson Gomes das Neves Magaly Morgana Lopes da Costa Aline Daniele da Cunha Lima Ewerton da Silva Barbosa Francisca Iris da Silva Souza

The availability of water is a limiting factor for the growth and productivity of yellow passion fruit (Passiflora edulis Sims). The use of bioregulators has been investigated as a strategy to mitigate the effects of abiotic stress. Different concentrations of SNP were evaluated on growth, gas exchange, photosynthetic pigments, chlorophyll fluorescence, and enzymatic activity in Passiflora edulis seedlings under different water conditions. The experiment was conducted in a randomized block design, in a 2 × 4 factorial scheme, with two irrigation conditions (80 and 30% of field capacity), combined with three concentrations of SNP (50, 100 and 250 µM) and water (control), with five replications. Water deficit reduced morphological, physiological, and enzymatic parameters. The application of SNP increased root fresh mass (23.56 g at the 100 µM dose) and leaf dry mass (8.21 g at 250 µM SNP), with increases of 24.52% and 30.52% compared to the values obtained under the 50 µM dose, respectively. The highest number of leaves (14) and leaf area (1183.3 cm2) was observed at 250 µM SNP, corresponding to increases of 7.70% and 17.27%, respectively, compared to plants without SNP application. Water deficit reduced growth, gas exchange, chlorophyll fluorescence, and enzymatic activity. SNP promotes improvements in growth; however, it does not mitigate water deficit effects in Passiflora edulis seedlings.

International Journal of Plant Biology doi: 10.3390/ijpb17050038

Authors: Lin Gou Shang Shi Chenghao Zhu Ling Liu Jianmin Tang Rong Zou Xiao Wei

Champereia manillana (Bl.) Merr. var. longistaminea is an evergreen small tree. It belongs to the genus Champereia Griff. (Opiliaceae), and its tender leaves or flower buds can be eaten. It also has important medicinal and nutritional values. Wild populations of C. manillana are small and has a phenomenon of deforestation. Market development is hindered by propagation constraints, including low seed germination rates and poor rooting of cuttings. Standardized cultivation protocols are currently lacking. This paper systematically reviews the current status of propagation and cultivation research on C. manillana and analyzed the primary challenges. Recent research indicated that seed germination obstacles had been preliminarily overcome, and 50% shading was identified as the optimal cultivation condition. However, challenges remain, including slow growth, lack of standardized water and fertilizer management, and unclear molecular mechanisms regulating development. Future research should focus on improving vegetative propagation efficiency, elucidating growth mechanisms via multi-omics, and establishing standardized cultivation protocols from breeding to harvest. These strategies are essential for the sustainable utilization of C. manillana resources.

International Journal of Plant Biology doi: 10.3390/ijpb17050037

Authors: Ma Isabel Reyes-Santamaria David Chávez-Trejo Aracely Hernández-Pérez René Velázquez-Jiménez Eliazar Aquino-Torres Amanulla Khan Antonio de Jesus Cenobio-Galindo Macario Vicente-Flores Iridiam Hernández-Soto

The jalapeño pepper (Capsicum annuum L.) is a crop of great economic and nutritional importance worldwide; however, increasing yield and quality under conditions of reduced synthetic inputs remains a significant challenge, mainly due to restrictions in plant nutrition and stress response capacity; in this context, plant-based biostimulants, such as Ricinus communis extracts, are of particular interest due to their potential to modulate plant metabolism, promote growth, and favor the accumulation of bioactive compounds. In this study, the effect of a foliar-applied biostimulant derived from a methanolic extract of Ricinus communis L. on the physiological, agronomic, and biochemical parameters of jalapeño peppers was evaluated under open field conditions. A randomized complete design with five treatments was established: three extract concentrations (T50: 50 mg L−1, T75: 75 mg L−1, and T100: 100 mg L−1), a commercial biostimulant (Pepton 85/16 ®), and an absolute control. Significant differences (α ≤ 0.05) were observed between treatments T50, T75, and T100 with the application of castor bean and the absolute control in stem diameter, fruit number, yield, and polar and equatorial fruit diameter, as well as phenols, flavonoids, and antioxidant capacity (ABTS and DPPH). The application of R. communis extract (T50, T75, and T100) significantly improved plant performance compared to the control, particularly in yield (up to 270%), fruit number (73%), shoot biomass (up to 38%), and root development (up to 32%). Furthermore, increases in chlorophyll content and in antioxidant-related compounds were observed, including phenols, flavonoids, ABTS, and DPPH (up to 17%). Spearman correlation analysis revealed strong associations between structural and metabolic variables, highlighting the relationship between stem diameter, fruit traits, and bioactive compound accumulation, as well as the link between chlorophyll content and reproductive performance. The 1H NMR analysis indicated the presence of secondary metabolites such as ricin, unsaturated fatty acids, and phenolic compounds; however, their isolation and relationship with the biostimulant activity of the extract require further specific studies. Overall, foliar application of R. communis extract improved the growth, productivity, and biochemical attributes of jalapeño pepper, highlighting its potential as a sustainable alternative for crop management.

International Journal of Plant Biology doi: 10.3390/ijpb17050036

Authors: Anawat Padpaiboon Nuttha Sanevas Pornsawan Sutthinon

Epiphytic and leafless orchids possess specialized root structures and host diverse associated microorganisms, which may contribute to their adaptation to limited access to water, nutrients, and photosynthetic tissues. Microscopic, anatomical, and molecular analyses of aerial and substrate roots of Chiloschista lunifera (Rchb.f.) J.J.Sm. revealed consistent phototrophic microbial biofilms on the velamen surface. These biofilms comprised filamentous and unicellular cyanobacteria, singular bacterial cells, and green algae. Morphological characterisation identified cyanobacteria belonging to five taxonomic orders, which are Chroococcales, Chroococcidiopsidales, Nostocales, Leptolyngbyales, and Synechococcales. 16S rRNA amplicon sequencing confirmed cyanobacterial dominance, with Chroococcidiopsis thermalis PCC 7203 strongly prevalent in root wash samples (up to 99.99% relative abundance), while root homogenate samples harboured a more diverse assemblage including Phormidiaceae, Leptolyngbya, Scytonema, and Calothrix. In addition, a green alga from Watanabeales (Jaagichlorella sp.) was identified based on morphological characteristics. TEM showed diverse cyanobacterial forms and unicellular green algae with well-developed photosynthetic structures. Root anatomy differed between root types. Substrate roots exhibited an inverted kidney-shaped transverse profile, whereas aerial roots were circular, with differences in velamen distribution reflecting adaptation for water retention and substrate attachment. Branched root hairs occurred on substrate roots, while aerial roots possessed unbranched root hairs, indicating functional specialization. Autofluorescence analysis revealed lignified tissues and abundant cortical chloroplasts, suggesting a photosynthetic role of the roots that may compensate for leaflessness. These findings enhance our understanding of the anatomical and ultrastructural features of epiphytic leafless orchid roots and may support future conservation and propagation efforts.

International Journal of Plant Biology doi: 10.3390/ijpb17040035

Authors: Nigussie Kefelegn Solomon Benor Gizachew Haile Gidamo Asnake Fikre Ming Pei You Martin J. Barbetti

Yield is a complex trait influenced by multiple components and their genetic behavior. Therefore, this study was designed to understand the complex nature of yield by uncovering relationships among traits and estimating the genetic parameters of lentil germplasm. One hundred and ninety-two lentil (Lens culinaris) germplasm samples were evaluated at Jamma and Enewari (field experiment) and at Debre Birehan agricultural research center (pot experiment) in Amhara Region, Ethiopia, in 2024 and 2025. An alpha lattice design was used for both set of experiment, and data on 12 agronomic traits were collected. Genetic parameter estimations, correlation, path, principal component and cluster analyses were performed in R. The results revealed substantial phenotypic and genetic variation among the evaluated germplasm, with high broad-sense heritability for flowering, maturity, and seed size traits, and moderate heritability for seeds per plant, plant height, harvest index, and yield. Yield exhibited a strong phenotypic correlation with harvest index (r = 0.78 in field and r = 0.95 in pots), biomass (r = 0.77 in the field and r = 0.78 in pots), seeds per plant (r = 0.42 in the field and r = 0.60 in pots), and podding (r = 0.45 in the field and r = 0.69 in pots). Similarly, genotypic correlations were high with harvest index (r = 0.83 in the field and r = 0.96 in pots), biomass (r = 0.75 in the field and r = 0.80 in pots), seeds per plant (r = 0.0.59 in the field and r = 0.58 in pots), and podding (r = 0.39 in the field and r = 0.68 in pot), and both their direct and indirect effects on yield were significantly high. Therefore, indirect selection through traits such as pods per plant, harvest index, biomass, and seeds per plant would be more effective and reliable for improving seed yield than direct selection for yield itself as this is highly affected by environmental variations.

International Journal of Plant Biology doi: 10.3390/ijpb17040034

Authors: Pablo Santana Vial Niquisse José Alberto Emanoel Chequetto Wellington Castrillon Grélla Laís da Silva Magevski Militino Paiva Carrafa Edilson Romais Schmildt Deurimar Herênio Gonçalves Júnior Fábio Luiz Partelli

This study evaluated the morphological development of 23 Coffea canephora clones in Espírito Santo to identify materials with superior vigor and quality for commercial and breeding purposes. Seedlings from cuttings were arranged in a completely randomized design with ten replicates and assessed at the commercial dispatch stage. Shoot and root growth, biomass, leaf area (LA), Dickson Quality Index (DQI), structural ratios (shoot/root ratio, SRR; height/diameter ratio, HDR), and anatomical traits were measured. Data were analyzed using analysis of variance with Scott–Knott clustering, Pearson correlation, and Principal Component Analysis (PCA). Significant variability was observed among clones. Clones 88, VR3, 8, and LB33 showed the highest stem diameter (SD), total dry mass (TDM), LA, and DQI, with balanced shoot and root development. Leaf area correlated strongly with SD, number of leaves (NL), biomass, and DQI, confirming its role as a seedling quality indicator. PCA identified two groups: a high-performance group with greater vigor and biomass, and a lower-performance group including clones 7, MR04, and VR4. The convergence of methods confirms the robustness of the results. Overall, clones 88, VR3, 8, and LB33 demonstrate superior agronomic potential at the seedling stage, offering promising options for nurseries, growers, and clonal selection programs.

International Journal of Plant Biology doi: 10.3390/ijpb17040033

Authors: Fatima Lakhdar Bouchra Benhniya Jamal Bouhraoua Selma Mabrouki Nazha Samri Badr-ddine El Mouns Taoufik Hachimi Nabila Boujaber Omar Assobhei Samira Etahiri

Phytopathogenic diseases are a major limiting factor in agricultural production. Therefore, scientific research continues to focus on developing effective techniques to mitigate their impact on crop productivity. Seaweed extracts, used as nutritional supplements, organic fertilizers, or bio-pesticides, have demonstrated their ability to enhance plant growth, increase yield, and alleviate the effects of abiotic stress. This study aimed to evaluate the effect of the aqueous extract of Bifurcaria bifurcata, collected from the Atlantic coast of Sidi Bouzid (El Jadida, Morocco), on the growth of Solanum tuberosum L., as well as its bactericidal activity against soft rot caused by Dickeya dadantii. The chemical Characterization revealed that Bifurcaria bifurcata aqueous extract is rich in polar and hydrophilic functional groups. In addition, this extract is particularly rich in phenolic metabolites, particularly phenolic acids, such as p-coumaric acid, ferulic acid, vanillic acid, and caffeic acid, which are known for their potential antimicrobial mechanisms. However, the treatment with 4 g/L extract resulted in a significant reduction in disease symptoms (>60%) and enhanced plant growth parameters, including 21% increase in plant height and 33% increase in leaf number. POX activity increased 6-fold (from 0.12 to 0.7 µmol/min/mg protein), indicating successful elicitation of plant defense mechanisms. The Bifurcaria bifurcata extract could act as novel activators of plant defense mechanisms and serve as potential alternatives to chemical pesticides.

International Journal of Plant Biology doi: 10.3390/ijpb17040032

Authors: Mingcan Fu Xianbin Liu Chengyu Zhang Jian Ding Bin Liu Xiangqian Wu Zhiyang Wang

Systematic comparisons of how plants with contrasting ecological strategies respond to extremely wide nutrient availability gradients remain limited. We investigated the physiological, photosynthetic, and growth adaptations of four plant species representing distinct ecological strategies: Triticum aestivum L. (C3 annual crop), Zea mays L. (C4 annual crop), Ipomoea aquatica Forssk. (C3 annual/perennial aquatic vegetable), and Canna glauca L. (C3 perennial wetland ornamental). Plants were grown hydroponically under nitrogen (N), phosphorus (P), and potassium (K) gradients ranging from 0% to 500% of standard Hoagland nutrient solution. The study results showed that all measured plant traits exhibited characteristic unimodal dose–response patterns. Optimal performance mostly occurred at 100–150% nutrient availability gradients. Severe inhibition or mortality occurred at extreme gradients. Simultaneously, different plant species displayed markedly varying response amplitudes and nutrient-specific sensitivities. Z. mays showed the highest nutrient use efficiency and broadest optimal ranges, particularly for N and K. C. glauca exhibited extraordinary N responsiveness (32-fold increase in photosynthetic rate) but narrow optimal ranges (e.g., 1.01 ± 0.15 μmol CO2/(m2·s) at the 1% N treatment vs. 32.52 ± 3.33 μmol CO2/(m2·s) at the 150% N treatment). I. aquatica showed pronounced P limitation with broad tolerance to supra-optimal N and K. T. aestivum displayed moderate responses with clear sensitivity to N limitation. Root–shoot ratios declined systematically with increasing nutrient availability across all plant species, following negative exponential functions. The results of data analyses revealed significant effects of N, P, and K availability on all the determined plant traits. Correlation analyses demonstrated tight coupling effects among physiological, photosynthetic, and growth traits, indicating integrated whole-plant responses to nutrient variations. These findings reveal that plant ecological strategy systematically modulates nutrient response patterns and provide a quantitative framework for species-specific nutrient management. This study provides a theoretical basis for precision fertilization of aquatic vegetables and wetland plants, and more broadly support species-specific nutrient management in controlled-environment agriculture.

International Journal of Plant Biology doi: 10.3390/ijpb17040031

Authors: Shitong Chang Wanlong Li Zhou Liu Xiaomei Zhou Xiaoxi Shen

Soybean (Glycine max L. Merr.) is one of the most important legume crops globally, providing high-quality plant protein and oil for humans and livestock, and playing a crucial role in nitrogen fixation within agricultural ecosystems. The seeds contain about 35–40% protein by dry weight, with 65–80% of this being seed storage proteins (SSPs). These proteins mainly consist of 11S globulin (glycinin) and 7S β-conglycinin, which accumulate significantly in protein bodies during seed development, providing essential nitrogen and amino acids for seed germination and early seedling growth. Additionally, the composition and structure of SSPs directly determine the nutritional value, processing functionalities (such as emulsification, gelation, and solubility), and potential allergenicity of soybean products. In this study, we conducted a detailed analysis of the structural characteristics, chromosomal localization, phylogenetic relationships, and tissue expression patterns of members of the soybean Gy gene family, laying a theoretical foundation for further exploration of the biological functions of Gy genes in soybeans. We performed comprehensive genomic identification, expression analysis, and subcellular localization of the soybean Gy gene family. The results showed that the seven soybean Gy genes are unevenly distributed across different chromosomes and exhibit distinct expression patterns in soybean seeds, suggesting they may have different roles during seed development. Subcellular localization experiments indicated that the GmGy1 gene might play an important role during seed development. These findings provide significant insights into the functions of the Gy gene family in soybean growth and development and offer potential candidate gene targets for soybean molecular breeding.

International Journal of Plant Biology doi: 10.3390/ijpb17040030

Authors: Khadija Khouya Houda Taimourya Soumia El Malahi Jamaâ Zim Ibtissam Lahrach Aya Elatrassi Bahija Zakri Abdellah Benbya Khadija Basaid Ouiam Lahlou Yasmina Imani Mounia Ennami

Climate change exacerbates water scarcity in semi-arid and arid regions, particularly across the Mediterranean Basin, posing severe challenges to food security and freshwater availability. Non-conventional water resources, such as desalinated seawater, are increasingly considered for supplementing irrigation; however, their exclusive use can induce osmotic stress, nutrient imbalances, and soil alkalinity, thereby limiting crop performance. This study evaluated the agronomic, and physiological impacts of blending freshwater (FW) and desalinated seawater (DSW) for two zucchini (Cucurbita pepo L.) cultivars, Radia and Kayssar, under greenhouse conditions. Five irrigation regimes were tested: T1 (FW100%), T2 (FW75%-DSW25%), T3 (FW50%-DSW50%), T4 (FW25%-DSW75%), and T5 (DSW100%). Moderate blending, particularly T2 and T3, optimized vegetative growth, biomass accumulation, and reproductive performance, maximum yields were obtained under T3, reaching 6.65 kg/plant for Radia and 5.49 kg/plant for Kayssar, while fruit quality, including caliber and soluble solids content (°Brix), was also highest under this regime. These findings support the suggestion that implementing such combined/blended irrigation regimes can enhance vegetative growth, yield, and fruit quality in the face of increasing water scarcity and energy constraints.

International Journal of Plant Biology doi: 10.3390/ijpb17040029

Authors: Abdul Rehaman Syed Nazar ul Islam Arif Tasleem Jan Sajid Khan Mohd Asgher Nafees A. Khan

The common bean (Phaseolus vulgaris L.cv. BR-104) is the most widely cultivated legume crop and serves as a major dietary protein source worldwide. However, climate change-induced drought poses a severe threat to its productivity by disrupting key physiological and biochemical processes. Therefore, identifying effective strategies to enhance drought resilience in the common bean is of considerable importance. The present study investigates the regulatory role of hydrogen sulfide (H2S) in improving drought tolerance. Polyethylene glycol (15% PEG) induced drought stress markedly reduced phenotypic changes (leaf area (LA), plant dry weight (PDW), root length (RL), and shoot length (SL) by 18.6, 20.5, 30.3 and 17.5% respectively), photosynthetic efficiency (Fv/Fm by 28.4%), and photosynthetic pigment concentrations (chlorophyll and carotenoids by 25.6 and 36%, respectively), while significantly elevating oxidative stress markers (H2O2 and TBARS by 137.1% and 169.8%, respectively), leading to impaired stomatal movement and damaged chloroplast structure. Exogenous H2S application as sodium hydrogen sulfide (200 µM NaHS; H2S donor) effectively alleviated drought-induced oxidative damage by boosting endogenous H2S and GSH levels, upregulating activity of antioxidative enzymes, SOD, APX, and GR, thereby promoting reactive oxygen species (ROS) scavenging, and minimizing lipid peroxidation. Moreover, H2S maintained photosynthetic efficiency via improved stomatal openings and chloroplast structure, thus sustaining chlorophyll levels and stabilizing photosystem-II functionality. Enhanced proline accumulation following NaHS application led to improved osmotic adjustment, thereby contributing to overall stress tolerance. The use of a H2S scavenger at 100 µM HT (Hypotaurine) suppressed the mitigating effects of H2S, confirming the role of H2S in enhancing drought tolerance in the common bean. Collectively, these findings highlight the potential effect of H2S as a regulatory signaling molecule to enhance drought resilience in the common bean under drought stress conditions. Further research should explore integrating H2S-based treatments with breeding programs and agronomic practices to develop sustainable strategies to improve drought resilience in legumes and other staple crops under changing climatic conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17040028

Authors: Andrey R. Suprun Stanislava A. Vinogradova Konstantin V. Kiselev Nikolay N. Nityagovsky Alexandra S. Dubrovina

Exogenously induced RNA interference (exoRNAi) is a powerful biotechnology tool for precise gene regulation. The plant chalcone synthase (CHS) gene serves as a valuable model for molecular biology due to its central role in flavonoid biosynthesis. However, there are currently very few studies addressing the advantages and disadvantages of in vitro (enzymatic) or in vivo (bacterial) methods for producing double-stranded RNA (dsRNA) for exogenous application. This study aims to optimize and compare the two methods for producing dsRNAs targeting the Arabidopsis thaliana CHS gene: enzymatic synthesis in vitro using a commercial kit and bacterial synthesis in vivo using an engineered E. coli HT115 (DE3) system. Bacterial synthesis conditions were optimized with respect to IPTG concentration and cultivation time, and the resulting dsRNA preparations were purified and quality-controlled. Their biological activities were assessed by treating A. thaliana plants and analyzing the effects on AtCHS gene expression and flavonoid production using qRT-PCR and HPLC-MS. The results demonstrated that purified AtCHS-dsRNA from both methods effectively suppressed AtCHS expression and downstream flavonoid biosynthetic gene expression, leading to significant reductions in anthocyanins and flavanols. This study confirmed the efficacy of exogenous dsRNAs in regulating plant metabolic pathways and provided a comparative analysis of dsRNA synthesis methods, highlighting their benefits and limitations for practical applications in plant biology and protection.

International Journal of Plant Biology doi: 10.3390/ijpb17040027

Authors: Eugenia León-Jiménez Federico A. Gutiérrez-Miceli Esaú Ruíz-Sánchez Daniel González-Mendoza Benjamín Valdez-Salas María C. Luján-Hidalgo Joaquín A. Montes-Molina Angel M. Herrera-Gorocica

The use of nanoparticles (NPs) synthesized from plant extracts is an alternative to conventional pesticides for the control of agricultural pests. This study aimed to optimize the conditions of synthesis of silver–zinc nanoparticles (Ag-ZnNPs) using extracts of Ocimum basilicum L. and Crotalaria longirostrata Hook. & Arn. and to evaluate their phytotoxic impact on maize seedlings. The Ag-ZnNPs (Ag-Zn nanoparticles) were synthesized by redox reaction between metal ions and reducing metabolites present in the extracts. A response surface methodology (RSM) with three factors (extract concentration, heating time and pressure) was applied to determine the optimal synthesis conditions. The phytotoxicity of nanoparticles (NPs) on maize seedlings was subsequently evaluated on root growth, oxidative stress enzymes (CAT, POD, and APX), and physiology of seedlings. Nanoparticles synthesized from C. longirostrata extract demonstrated superior properties, with an optimization of synthesis (R2 = 95.3%) where the extract concentration (1:4 v/v; p < 0.01) was the critical factor influencing the reduction of metallic ions to nanoparticles. These NPs exhibited superior stability, smaller size (<100 nm), and zeta potential greater than 30 mV compared with O. basilicum extracts. Their NPs exhibited poorer optimization of synthesis (R2 = 43.8%) without the effect of any of the variables evaluated. Essentially, C. longirostrata NPs showed no phytotoxic effects on maize seedlings’ physiological parameters and enhanced root growth (117.2 mm) without negatively affecting photosynthesis (PSII 70-81 FvFm). Ag-ZnNPs synthesized with C. longirostrata exhibited optimal stability and size, along with no observed possible phytotoxicity effects, unlike O. basilicum NPs, which cause stress on maize seedlings. Therefore, Crotalaria longirostrata NPs could represent a promising material for agricultural pest control, with no apparent adverse effect on maize crops.

International Journal of Plant Biology doi: 10.3390/ijpb17040026

Authors: Da Hyeon Lee Jungeun Cho Hyeon Park Tae Hyeon Heo Ju Kyong Lee

This study evaluated morphological variation in 45 accessions of cultivated Perilla frutescens var. frutescens (PFF) and var. crispa (PFC) collected from South Korea and Japan, together with their weedy counterparts, var. frutescens (WPFF) and var. crispa (WPFC) from South Korea, using ten quantitative and ten qualitative traits. Clear morphological differentiation was observed between cultivated and weedy forms in both varieties, particularly in pigmentation, plant fragrance, and seed-related traits. PFF cultivars were characterized by predominantly green pigmentation, a typical frutescens aroma, and significantly larger and heavier seeds, suggesting stronger phenotypic differentiation in leaf and seed utilization. In contrast, PFC cultivars showed substantial morphological overlap with WPFC and WPFF accessions, indicating comparatively weaker phenotypic differentiation. Principal component analysis showed that the first principal component (PC1) explained 25.7% of the total phenotypic variance and was strongly associated with five quantitative traits (plant height, inflorescence length, floret number, seed size, and 100-seed weight) and five qualitative traits (adaxial and abaxial leaf color, flower color, seed color, and seed hardness). Along PC1, PFF cultivars formed a well-defined cluster, whereas PFC cultivars and the weedy WPFF and WPFC accessions exhibited broader dispersion, reflecting greater morphological variability. These results provide morphological insights into the differentiation between cultivated and weedy Perilla accessions and indicate potential domestication-related patterns. However, these interpretations are based primarily on morphological observations, and further genetic and evolutionary studies will be necessary to clarify the domestication history of these taxa. The identified trait complexes provide a useful phenotypic foundation for marker-assisted breeding, informed cultivar selection, and effective germplasm conservation and management.

International Journal of Plant Biology doi: 10.3390/ijpb17040025

Authors: Ulyana Panova Olga Kotsupiy Evgeniya Karpova Elena Ambros

Astragalus glycyphyllos (Fabaceae) is known to be a source of flavones, flavonols, and isoflavones, and its in vitro culture may promote the efficiency and sustainability of obtaining pharmacologically valuable fractions. The aim of this study was to develop an effective plantlet regeneration protocol for A. glycyphyllos, providing the accumulation of phenolic compounds and antioxidants in cultured tissues. The results show a maximum seed germination rate (67.8%) after scarification (mechanical with sandpaper followed by treatment with 50% sulfuric acid) and subsequent sterilization with 1.1% sodium hypochlorite solution. The maximum regeneration rate (95%) was achieved on Murashige and Skoog medium supplemented with 0.5 mg·L−1 thidiazuron. A thidiazuron concentration of 0.05 mg·L−1, combined with a twofold increase in iron chelate content, induced the maximum yield of total flavonoids (8.74 mg·g−1 DW), and significant levels of total phenolics (4.15 mg·g−1) and antioxidants (1.83 mg AAE·g−1) in the microshoot tissues. HPLC analysis showed kaempferol glycosides (1.51 mg·g−1) and acylated kaempferol glycosides (2.76 mg·g−1) as major components. Formononetin in a modest amount (0.09 mg·g−1) was detected in hydrolyzed extracts. The phenolic profiles of the microshoots and native plants coincided in hydroxycinnamic acid composition; meanwhile, quercetin glycosides were present only in in situ plants, and formononetin was found only in the plantlets. The results confirm the prospects of biotechnological methods for the industrial production of standardized medicinal raw materials.

International Journal of Plant Biology doi: 10.3390/ijpb17040024

Authors: Patrick Chiza Chikoti Batiseba Tembo Xinyao He David Paul Hodson Aakash Chawade Pawan K. Singh

Wheat blast, caused by Magnaporthe oryzae pathotype Triticum (MoT), is an emerging fungal disease that poses a serious threat to global wheat production. In Zambia, where wheat is increasingly becoming a vital component for food and nutritional security, the emergence and spread of wheat blast is a growing concern under the influence of climate and agricultural practices changes. This review assesses the risk of wheat blast expansion in Zambia by examining regional climatic trends, future climate projections, crop suitability, and the ecological requirements of MoT. Potential disease hotspots are identified, and integrated management strategies, including chemical, cultural, and biotechnological approaches are evaluated. The review highlights the urgent need for coordinated disease surveillance, the development and deployment of resistant cultivars, and climate-resilient farming practices. By consolidating current knowledge and outlining sustainable management strategies, this paper aims to support effective disease mitigation and safeguard wheat production in Zambia in the face of climate change.

International Journal of Plant Biology doi: 10.3390/ijpb17030023

Authors: Cayetano Navarrete-Molina María A. Sariñana-Navarrete Cesar A. Meza-Herrera Ángeles De Santiago-Miramontes José L. Rodriguez-Alvarez Raúl A. Cuevas-Jacquez Luis M. Valenzuela-Núñez Ricardo I. Ramírez-Gottfried Edir Torres-Rodriguez Rubén I. Marín-Tinoco

The genus Juniperus species is widely distributed in the Northern Hemisphere of the planet Earth. These species are notable for their ability to adapt to extreme environmental conditions, playing a crucial role in ecosystem structure and function. Currently, their expansion is being driven by anthropogenic activities and climate change, posing significant challenges for both control and conservation. The objective of this review was to synthesize the available evidence regarding the ecological importance and impacts of Juniperus on ecosystems, promoting a holistic perspective that contributes to the achievement of the United Nations 2030 Agenda for Sustainable Development. A systematic literature search was conducted using the Scopus database, and only the documents published between 2001 and 2025 were considered for the investigation. The results showed that these species possess a high ecological versatility, favoring their invasive success in disturbed ecosystems, particularly under the influence of climate change and land-use changes. Conversely, Juniperus species facilitate positive ecological outcomes by providing essential ecosystem services that benefit both the human population and the flora and fauna present in these ecosystems. Nevertheless, their expansion also causes negative effects, such as the suppression of herbaceous shrubs and understory cover, alteration of the hydrological function, and accelerated soil erosion, among others. Consequently, the genus Juniperus exhibits a dual ecological role, acting as a hero to many species within these ecosystems, yet a villain to others. In this sense, given its remarkable adaptive dynamism under scenarios of climate change and continuous anthropogenic alterations, it is imperative to promote comprehensive conservation and restoration strategies. These should include ecological monitoring, invasive species control, genetic management, and habitat restoration. Such efforts must be supported by long-term interdisciplinary research to understand and mitigate the ecological, genetic, and social impacts resulting from its expansion. Furthermore, these investigations and strategies must be flexible and locally contextualized to promote genuine ecosystem resilience in the face of the ongoing environmental transformations.

International Journal of Plant Biology doi: 10.3390/ijpb17030022

Authors: Tatiane Otto de França Bárbara Martins Bruno Gonçalves de Oliveira Luiz Antonio Biasi Renato Vasconcelos Botelho António M. Jordão

The use of new grape cultivars is essential for the continued development of Brazilian viticulture. Thus, this study aimed to determine the general physicochemical parameters, global phenolic composition, and antioxidant capacity of grape musts from the Portuguese red variety ‘Touriga Nacional’ during ripening in two Brazilian vineyards (states of Rio Grande do Sul and Santa Catarina). The results were compared with data obtained from the same variety cultivated in a vineyard located in northern Portugal, which is the region of origin of this variety. This research was conducted over three consecutive vintages (2022–2024). Overall, the results indicated that soil and climate conditions at each location were associated with differences in the composition of ‘Touriga Nacional’ grape musts. Grapes from both Brazilian vineyards showed significantly higher berry weight, must volume, and yield compared with grapes collected from the Portuguese vineyard. On the other hand, grapes collected from the vineyard located in the state of Santa Catarina exhibited the highest values of total titratable acidity, malic acid, total phenols, flavonoids, total anthocyanins, and chromatic characteristics. Nevertheless, grapes collected from the Portuguese vineyard showed higher values of total tannins. The results suggest that the ‘Touriga Nacional’ variety shows better adaptation to the conditions of the Santa Catarina vineyard than to those of the Rio Grande do Sul vineyard. These findings help winegrowers, particularly in southern Brazil, to have more options for introducing different grape varieties, thereby contributing to the production of wines with distinctive characteristics, while consumers will have access to a greater diversity of wines available on the market.

International Journal of Plant Biology doi: 10.3390/ijpb17030021

Authors: Magdoline Mustafa Ahmed Osman Ronald Kuunya Rania Alrasheed András Tamás Illés Árpád Tamás Rátonyi

Water stress is a major challenge that limits the growth, development, and yield of maize (Zea mays L.) worldwide, especially under climate change, particularly abiotic stresses. This review presents a comprehensive bibliometric and literature-based analysis of research on maize’s response to drought and water scarcity from 1975 to 2025, using VOS viewer1.6.20 software, facilitating the detection of co-authorship networks, thematic groupings, and patterns of keyword co-occurrence within the selected publications. Data from the Web of Science were examined to assess publication trends, keyword networks, and international collaborations. A literature search was conducted by combining the keywords ((“maize”) OR (“corn”) AND (“drought”) OR (“water stress”) AND (“yield”)). Relevant studies were retrieved from the Web of Science (WoS) database using this search string. The Mann–Kendall test revealed a significant positive trend (p = 0.001) in publications on water scarcity (R2 = 0.8526), with 396 relevant studies identified globally, regardless of language. The analysis of publication trends demonstrated a statistically significant increase in the volume of publications over the examined period, featuring major contributions from Kenya, Switzerland, Mexico, China, and the United States. The most influential publication focuses on a biotic stressor that significantly reduces maize grain yield. These results emphasise the need for integrated strategies that combine genetic improvement and sustainable irrigation to mitigate the impacts of water stress. This comprehensive analysis provides a foundation for guiding future research and policy development to improve maize resilience against the effects of water stress under changing climatic conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17030020

Authors: Luis Cagua-Montaño Karen Rodas-Pazmiño Jorge Fabricio Guevara-Viejó Betty Pazmiño-Gómez Ignacio Isa-Vargas Samuel Valle-Asan Rodrigo Pazmiño-Pérez Stefany Pilar Jami Jami Ivana Alexandra Armijos Galarza Edgar Rodas-Neira Cristhian Emilio Delgado Espinoza

Seed germination and early root growth are decisive for crop establishment, yet responses to ionic environments can be strongly genotype-dependent. This study evaluated the effect of supplementing an agar-based in vitro system with a commercial NPK fertilizer on the germination dynamics and early seedling traits of Raphanus sativus L. Seeds were tested in two solid media: A (1.3% agar, no fertilizer) and AF (1.3% agar supplemented with 0.45 g of granular NPK fertilizer (15–30–15) per 200 mL medium), using a completely randomized 3 × 2 factorial design. Germination percentage and synchrony are key constituents of seedlot evaluation because they jointly capture both viability and the temporal coordination of emergence. However, final germination percentage alone does not reflect the timing and uniformity of germination, which can be critical for predicting establishment and subsequent performance. Therefore, indices such as mean germination time (MGT), coefficient of velocity of germination (CVG), and interval germination rates are frequently employed to describe germination dynamics. In addition to germination dynamics, early seedling morphometry (e.g., root and hypocotyl traits) can provide complementary information on early vigor and stress sensitivity under contrasting media or environmental conditions. Root elongation was significantly reduced by fertilization in ASD and GE, whereas AS exhibited consistently shorter roots with no significant response. PCA summarized 86.3% of the total variance in the first two components, separating treatments along a vigour/architecture axis and a germination capacity axis (%G), and hierarchical clustering identified five response groups. Overall, a low-cost agar + fertilizer system effectively discriminated genotype-specific sensitivity to an ionic environment during early establishment, highlighting the need to consider variety-dependent thresholds when using commercial fertilizers for in vitro screening.

International Journal of Plant Biology doi: 10.3390/ijpb17030019

Authors: Almagul Malimbayeva Batyrgali Amangaliev Erbol Zhusupbekov Akerke Soltanayeva Aina Sagimbayeva Zhuldyz Oshakbayeva Karlyga Rustemova Maksat Batyrbek

Efficient nutrient management is essential for enhancing flax productivity under semi-arid conditions. A two-year field experiment (2024–2025) was conducted in southeast Kazakhstan to evaluate the effects of integrated foliar fertilization with macro- and micronutrients and biofertilizers on the growth, seed quality, and yield of flax (Linum usitatissimum L.). The experiment was arranged in a randomized complete block design with five treatments: T1 (control, absolute zero fertilization (N0P0K0), i.e., soil without any additional nutrient applications), T2 (N60P60K60), T3 (N60P60K60 + foliar macro–micronutrients), T4 (biofertilizer), and T5 (N60P60K60 + foliar macro–micronutrients + biofertilizer). Integrated foliar fertilization significantly increased nitrogen, phosphorus, and potassium concentrations in vegetative biomass and seeds, leading to higher nutrient uptake and improved nutrient use efficiency compared with mineral fertilization alone. Treatments combining foliar macro- and micronutrients with biofertilizers (T3 and T5) enhanced plant establishment, biomass accumulation, and dry matter allocation to reproductive organs. Seed yield increased from 0.58 to 0.89 t ha−1, while protein and oil contents ranged from 27.0 to 28.4% and 39.8–41.8%, respectively. The combined foliar treatment showed the highest and most stable performance, likely due to improved nutrient uptake and plant growth. These findings indicate that integrated foliar fertilization is an effective and sustainable strategy for improving flax yield stability, nutrient efficiency, and seed quality under semi-arid conditions.

International Journal of Plant Biology doi: 10.3390/ijpb17030018

Authors: Carlos Armas-Díaz David Montesinos-Pereira Lázaro Grisales Maria Corujo José Luis Vázquez-Gutiérrez Daniel Blandón-Granada Eduardo Hernández-Bolaños Andrés Acosta-Pérez Violeta Sánchez-Retuerta Beatriz Porras Laura Cuyas Luis Matías-Hernández

Biostimulants represent a sustainable strategy to enhance the therapeutic potential of medicinal plants, which often exhibit low and variable levels of bioactive compounds. Cannabis sativa, a medicinally important species, produces diverse cannabinoids, such as THC, CBD, CBG, and CBC, whose profiles depend on plant chemotype and determine pharmacological activity. We developed a novel plant-based biostimulant, Tricostimulant™, to optimize cannabinoid production in Cannabis sativa. Field trials demonstrated increased biomass and selective enhancement of cannabinoid content. In high-CBD chemotypes, Tricostimulant™ was associated with higher CBD and CBG without relevant changes in THC levels, whereas in high-THC chemotypes, higher THC values were observed without evident variation in CBD. The most pronounced differences were observed when the biostimulant was applied during the vegetative stage, highlighting the importance of application timing. These results indicate the potential of Tricostimulant™ to modulate cannabinoid profiles, contributing to improved optimization and standardization of cannabis-based therapeutics. Further research is required to confirm these findings and elucidate the underlying mechanisms of biostimulant action.

International Journal of Plant Biology doi: 10.3390/ijpb17030017

Authors: Alexander V. Babosha Pavla O. Loshakova Danila A. Shchelkanov Anastasia D. Alenicheva Margarita M. Gevorkyan Alina A. Pogost

This study used cryoSEM to analyze the seasonal stability of leaf surface micromorphology in cereal hybrids derived from crossing maternal ×Trititrigia cziczinii × Thinopyrum junceum lines with paternal wheat–wheatgrass hybrids. Over two growing seasons, relatively rare traits showed high stability, while most traits exhibiting initial diversity demonstrated seasonal variability. Paternal traits (hairs, prickles, elongated silica cells) predominated in hybrids, and hybrid diversity correlated significantly with paternal, but not maternal, line diversity. In 2025, a significant decrease in some paternally specific traits and an increase in rounded silica cells were observed compared to 2024. Coordinated dynamics were revealed: variations in maternal traits correlated positively with each other and negatively with some paternal traits. While certain micromorphological features exhibited relative stability, employing such traits for taxonomic purposes necessitates caution and a thorough understanding of their inherent variability ranges.

International Journal of Plant Biology doi: 10.3390/ijpb17030016

Authors: Farah Abu Siam Saeid Abu-Romman Saja A. K. Al-Rubaye Ruba M. AL-Mohusaien Monther T. Sadder

Ascorbate peroxidase (APX) is a heme-containing enzyme involved in hydrogen peroxide (H2O2) detoxification within the ascorbate–glutathione (AsA–GSH) cycle. In this study, the full-length genomic DNA and cDNA of an APX1 gene (VsAPX1) were cloned and characterized from Vicia sativa. The genomic sequence of VsAPX1 is 2425 bp in length and comprises 10 exons separated by nine introns, with the first intron located within the 5′ untranslated region (5′UTR). The corresponding cDNA is 1010 bp long and includes a 61 bp 5′UTR, a 753 bp open reading frame, and a 196 bp 3′UTR. VsAPX1 encodes a predicted cytosolic APX protein of 250 amino acids, with a molecular weight of 27.1 kDa and a theoretical isoelectric point (pI) of 5.60. Bioinformatics analysis revealed that the deduced VsAPX1 protein shares high sequence similarity with cytosolic APX1 proteins from other plant species, contains conserved APX domains, and clusters within the cytosolic APX clade in phylogenetic analysis. Quantitative real-time PCR analysis showed that VsAPX1 expression exhibits transient and moderate changes in response to abiotic stress and phytohormone treatments. Transcript levels increased at early time points following heat stress (42 °C), abscisic acid, and salicylic acid treatments, and after 4 h of jasmonic acid exposure, whereas hydrogen peroxide treatment resulted in a gradual down-regulation of expression. Overall, this study provides the first molecular and expression characterization of a cytosolic APX1 gene from Vicia sativa and establishes a foundation for future functional analyses of antioxidant genes in this species.

International Journal of Plant Biology doi: 10.3390/ijpb17030015

Authors: Ali Ait Youssef Reda Meziani Samira Serghat Timothy O. Jobe Mohamed Fokar Allal Douira

Date palms, a vital Moroccan crop that typically flowers once a year, displayed a rare double flowering phenomenon in the summer of 2023. This study investigated the occurrence of this phenomenon across three small oases in the Zagora region of southeastern Morocco. Field surveys revealed that 60% of spring-blooming palms also produced a second bloom in July, affecting trees of all ages, sexes, and varieties. This secondary flowering cycle featured a compressed development period, leading to limited fruit enlargement and a failure of most fruit to reach maturity. Analysis suggests that climatic fluctuations, specifically a delayed temperature rise during the normal spring cycle and relatively cooler shifts in July 2023, likely disrupted the palms’ reproductive schedule, triggering the anomaly. Despite the failed second harvest, the phenomenon did not have a negative impact on the palms’ productivity for the subsequent year, confirming that double flowering is a complex, climate-influenced event that requires further research to understand its full implications for local date production.

International Journal of Plant Biology doi: 10.3390/ijpb17030014

Authors: Nataliia Tkachuk Volodymyr Antonenko Svitlana Kyriienko Erzsébet Kohut Anita Szikura Yurii Karpenko Oleksandr Yakovenko Oksana Sahach Yaroslav Novikov Oleksandr Lukash

The search for new growth-regulating compounds remains a relevant research direction in view of the issue of food security. Previously, a number of thiazolyl acetic acid derivatives have been synthesized, which are promising biologically active compounds according to their physicochemical characteristics. The aim of this work was to study the growth-regulating properties of both previously and newly synthesized thiazolyl acetic acid derivatives using a growth phytotest with Lepidium sativum and Sinapis alba. This study was carried out under laboratory conditions of phytotesting growth indicators of test plants of the class Dicotyledones—L. sativum and S. alba under the influence of 10 μg/mL, 100 μg/mL, and 1000 μg/mL aqueous solutions of the compounds with a comparative analysis of the action of the active components of RhizoponTM and herbicide benazolin. It was found that, exhibiting high herbicidal properties at a concentration of 1000 μg/mL (primarily the compound with a benzothiazole fragment), the studied thiazolyl acetic acid derivatives with decreasing concentration (100 μg/mL and 10 μg/mL) reduce phytotoxicity to its complete elimination against L. sativum and S. alba for the compound 2-[2-(N-tert-butoxycarbonyl)-aminoethyl-1,3thiazol-4-yl]acetic acid (compound 3), as well as against L. sativum for the compound 5-phenylthiazol-2-yl acetic acid (compound 5). A weak stimulating effect on the length of the above-ground part of S. alba seedlings was recorded for 2-[2-(3,3,3-trifluoropropyl)-1,3thiazol-4-yl]acetic acid (compound 1) and 2-[2-(N-tert-butoxycarbonyl)-aminoethyl-1,3thiazol-4-yl]acetic acid (compound 3) at their concentration of 10 μg/mL; however, an improvement in the vitality index under the action of these compounds was not observed. The results obtained in this study indicate the biological activity of both previously and newly synthesized thiazolyl acetic acid derivatives, namely their growth-regulatory properties, expanding knowledge about promising herbicidal compounds with a possible hormetic effect, which requires further research.

International Journal of Plant Biology doi: 10.3390/ijpb17020013

Authors: Gleyse Lopes Fernandes de Souza Francisco Thiago Coelho Bezerra Rejane Maria Nunes Mendonça Walter Esfrain Pereira Marlene Alexandrina Ferreira Bezerra Tayd Dayvison Custódio Peixoto José Adeilson Medeiros do Nascimento Roberto Ítalo Lima da Silva Thayná Kelly Formiga de Medeiros Maria Alaíne da Cunha Lima Daniela Rosario de Mello Anne Alícia Meneses Ferreira Santana Antenor Pereira de Araújo Neto Anna Paula Marques Cardoso Lourival Ferreira Cavalcante

Salinity causes morphophysiological changes that compromise the growth and production of cultivated species, such as Passiflora edulis. However, wild species better tolerate environmental adversities. Therefore, we evaluated the performance of P. edulis scion (Guinezinho, BSR YG1, BRS SC1) grafted on Passiflora rootstocks (P. cincinnata, P. foetida, and P. edulis), regarding the electrical conductivity of irrigation water (0.5 and 3.0 dS m−1), and it was hypothesized that rootstocks would mitigate the effects of salinity and that there is a difference between non-grafted cultivars. Grafted plants reached the trellis stage sooner, and the use of P. foetida rootstocks reduced the time to prune the stem. The highest productivity was obtained with the YG1 cultivar grafted onto P. foetida, under irrigation with water salinity, reaching 8073.96 kg ha−1 and exceeding by up to 139.19% the other grafting and electrical conductivity of the irrigation water. The grafting technique proved effective in mitigating the effects of salinity, particularly the combination between P. foetida and YG1 cultivar P. edulis, which showed compatibility and superior agronomic performance under saline stress conditions. These results indicate a promising strategy for the sustainability of yellow passion fruit cultivation in semi-arid regions, contributing to the maintenance of productivity, even in environments with restricted water quality resources.

International Journal of Plant Biology doi: 10.3390/ijpb17020012

Authors: Jaqueline Zuta Lopez Rosalynn Y. Rivera Elver Coronel Castro Nixon Haro Gerson Meza-Mori Oscar Gamarra Manuel Oliva-Cruz Carlos A. Amasifuen Guerra José Giacomotti Elí Pariente

Globally, coffee-based agroforestry systems are recognized for their capacity to integrate agricultural production with biodiversity conservation, particularly in tropical landscapes under intense anthropogenic pressure. However, significant knowledge gaps remain regarding floristic composition, arboreal structure, and the ecological importance of woody species in Andean agroforestry systems of the Peruvian Amazon, especially along altitudinal gradients. The objective of this study was to characterize the diversity, floristic composition, arboreal structure, and ecological value of woody species in coffee-based agroforestry systems in the Department of Amazonas, Peru. Forest inventories were conducted in twelve one-hectare plots, recording dasometric variables, estimating diversity indices, analyzing floristic affinity, and calculating the Importance Value Index of species. A total of 57 tree species belonging to 41 genera and 25 families were recorded, with moderate diversity levels and a marked dominance of species from the Fabaceae family. The structure showed a predominance of young individuals, concentrated in low and intermediate diameter and height classes, and a moderate shade cover suitable for coffee cultivation. The species with the highest ecological and productive value were Pinus tecunumanii, Colubrina glandulosa, Clitoria juninensis, Inga edulis, and Inga mendozana, which perform key functions related to shade provision and soil fertility. These results are transferable to other coffee agroforestry systems in tropical montane regions and provide relevant evidence for sustainable forest management, biodiversity conservation, and productive optimization, issues of international interest in the agricultural and agroforestry sectors.

International Journal of Plant Biology doi: 10.3390/ijpb17020011

Authors: Maria Gancheva Aleksandr Tkachenko

Oxalis tuberosa (oca) is a tuber crop native to the Andes, valued for its nutrition but understudied genetically. Its strict short-day (SD) tuberization suggests a photoperiodic control mechanism similar to that of potato, where an FT-like protein acts as a mobile “tuberigen” signal. To identify this key regulator, we generated a de novo genome assembly for oca using long- and short-read sequencing. Integrated transcriptomic analysis of leaves under long-day (LD) and SD conditions, along with stems, roots, and tubers, enabled gene annotation and expression analysis. Our study focused on the Phosphatidylethanolamine-Binding Protein (PEBP) gene family, the source of florigen and tuberigen signals. We identified 23 OtPEBP genes and characterized their expression patterns. Among these, we discovered three FT-like homologs that are specifically and strongly upregulated in leaves under SD conditions. We therefore propose these genes as the prime candidates for the mobile tuberigen signal in oca. This work provides the foundational genomic resource for O. tuberosa and advances our understanding of the conserved photoperiodic network controlling storage organ formation beyond the Solanaceae family.

International Journal of Plant Biology doi: 10.3390/ijpb17020010

Authors: Marly Guelac-Santillan Jherson Rojas-Vargas Elmer Chávez-Chacón Eryka Gaslac-Zumaeta Manuel Oliva-Cruz Angel F. Huaman-Pilco

Anthracnose is one of the most destructive diseases of avocado worldwide; however, foliar infections remain poorly documented in Peru. We investigated the etiology of necrotic leaf lesions observed in avocado plantations in Amazonas and assessed the in vitro antifungal activity of two Piper essential oils (EOs). Incidence was quantified in a 420-tree plot (n = 150 plants). Two representative isolates (MGS03, MGS04) were obtained from symptomatic leaves and characterized by morphology and multilocus sequencing (ITS, CHS-1, ACT, and TUB2). Maximum-likelihood phylogeny within the C. gloeosporioides species complex clustered with C. fructicola. Pathogenicity tests on detached leaves (unwounded inoculation) reproduced field symptoms and fulfilled Koch’s postulates. The antifungal activity of Piper carpunya and P. aduncum EOs (50–1000 µL L−1) was evaluated using poisoned-medium assays, revealing a strong dose-dependent inhibition of mycelial growth. Inhibition reached >89.8% at 500 µL L−1 and ~100% at 1000 µL L−1, with P. aduncum showing slightly higher activity. This study provides the first confirmed record of C. fructicola associated with necrotic leaf lesions in avocado in Peru and demonstrates the promising antifungal potential of Piper EOs as eco-friendly candidates for anthracnose management.

International Journal of Plant Biology doi: 10.3390/ijpb17020009

Authors: Sanja Puljas Juraj Kamenjarin Ivica Šamanić

Cynipid gall wasps are known for their ability to manipulate host plant development, redirecting undifferentiated tissues into complex, highly specialised structures. In this study, we investigated how Andricus quercustozae larvae manipulate axillary bud tissues of Quercus virgiliana across four key stages of gall development: initiation, differentiation and growth, maturation, and lignification. Using detailed histological analyses, we characterised progressive tissue differentiation within galls, focusing on the organisation of nutritive, protective, and vascular tissues. Gall development was marked by sustained hyperplasia and hypertrophy, extensive vascular proliferation, and progressive cell wall lignification, resulting in a complex organ optimised for larval nutrition and protection. To complement these anatomical observations, we conducted a preliminary transcriptomic comparison between gall tissue and unmodified leaf tissue. Gene expression analyses revealed suppression of photosynthesis-related functions and coordinated modulation of developmental, regulatory, and metabolic pathways, consistent with a transition from assimilatory leaf tissue to a specialised nutrient sink. Integration of anatomical and transcriptomic evidence supports a model in which cynipid gall wasps intervene at key regulatory nodes of bud development, progressively reprogramming host tissues to form a functionally autonomous gall. These findings provide new insight into the extended phenotype and highlight the plasticity of plant developmental programmes under insect control.

International Journal of Plant Biology doi: 10.3390/ijpb17010008

Authors: Mariya Todorova Zhelyazkova

Lavender has been cultivated in Bulgaria for over a century. The high essential oil content and quality of Bulgarian lavender varieties have established the country as a leading global producer. Studies into the crop’s genetic diversity are essential for selecting varieties best suited to specific environmental conditions, maximizing resilience and yield. Therefore, identifying appropriate genetic markers to monitor lavender diversity is a key prerequisite for developing effective crop selection strategies, particularly in response to the challenges posed by global climate change. In this study, we evaluate the versatility of markers for assessing genetic diversity of lavender genotypes. A total of 96, 97 and 96 bands were recorded using the 13 Start Codon Targeted Polymorphism (SCoT), 13 Inter-Simple Sequence Repeat (ISSR) and 14 Cis-Element Aligned Polymorphism (CEAP) primers, respectively. All amplification programs used were successful in the studied genotypes. Additionally, four informative primers of each marker system were applied for assessment of the within-field genetic variability in two lavender plantations from Bulgaria. This is the first report on the combined use and comparison of CEAP, SCoT and ISSR primers in lavender genotypes in Bulgaria.

International Journal of Plant Biology doi: 10.3390/ijpb17010007

Authors: Unius Arinaitwe Dalitso Noble Yabwalo Abraham Hangamaisho Shillah Kwikiiriza Francis Akitwine

Micronutrients, particularly boron (B), iron (Fe), manganese (Mn), and zinc (Zn), are pivotal for cotton (Gossypium spp.) growth, reproductive success, and fiber quality. However, their critical roles are often overlooked in fertility programs focused primarily on macronutrients. This review synthesizes recent advances in the physiological, molecular, and agronomic understanding of B, Fe, Mn, and Zn in cotton production. The overarching goal is to elucidate their impact on cotton nutrient use efficiency (NUE). Drawing from the peer-reviewed literature, we highlight how these micronutrients regulate essential processes, including photosynthesis, cell wall integrity, hormone signaling, and stress remediation. These processes directly influence root development, boll retention, and fiber quality. As a result, deficiencies in these micronutrients contribute to significant yield gaps even when macronutrients are sufficiently supplied. Key genes, including Boron Transporter 1 (BOR1), Iron-Regulated Transporter 1 (IRT1), Natural Resistance-Associated Macrophage Protein 1 (NRAMP1), Zinc-Regulated Transporter/Iron-Regulated Transporter-like Protein (ZIP), and Gossypium hirsutum Zinc/Iron-regulated transporter-like Protein 3 (GhZIP3), are crucial for mediating micronutrient uptake and homeostasis. These genes can be leveraged in breeding for high-yielding, nutrient-efficient cotton varieties. In addition to molecular hacks, advanced phenotyping technologies, such as unmanned aerial vehicles (UAVs) and single-cell RNA sequencing (scRNA-seq; a technology that measures gene expression at single-cell level, enabling the high-resolution analysis of cellular diversity and the identification of rare cell types), provide novel avenues for identifying nutrient-efficient genotypes and elucidating regulatory networks. Future research directions should include leveraging microRNAs, CRISPR-based gene editing, and precision nutrient management to enhance the use efficiency of B, Fe, Mn, and Zn. These approaches are essential for addressing environmental challenges and closing persistent yield gaps within sustainable cotton production systems.

International Journal of Plant Biology doi: 10.3390/ijpb17010006

Authors: Weverton Gomes da Costa Hélcio Duarte Pereira Gabi Nunes Silva Aluizio Borém Eveline Teixeira Caixeta Antonio Carlos Baião de Oliveira Cosme Damião Cruz Moyses Nascimento

Genome-wide association studies (GWAS) are essential for identifying genomic regions associated with agronomic traits, but Linear Mixed Model (LMM)-based GWAS face challenges in capturing complex gene interactions. This study explores the potential of machine learning (ML) methodologies to enhance marker identification and association modeling in plant breeding. Unlike LMM-based GWAS, ML approaches do not require prior assumptions about marker–phenotype relationships, enabling the detection of epistatic effects and non-linear interactions. The research sought to assess and contrast approaches utilizing ML (Decision Tree—DT; Bagging—BA; Random Forest—RF; Boosting—BO; and Multivariate Adaptive Regression Splines—MARS) and LMM-based GWAS. A simulated F2 population comprising 1000 individuals was analyzed using 4010 SNP markers and ten traits modeled with epistatic interactions. The simulation included quantitative trait loci (QTL) counts varying between 8 and 240, with heritability levels set at 0.5 and 0.8. These characteristics simulate traits of candidate crops that represent a diverse range of agronomic species, including major cereal crops (e.g., maize and wheat) as well as leguminous crops (e.g., soybean), such as yield, with moderate heritability and a high number of QTLs, and plant height, with high heritability and an average number of QTLs, among others. To validate the simulation findings, the methodologies were further applied to a real Coffea arabica population (n = 195) to identify genomic regions associated with yield, a complex polygenic trait. Results demonstrated a fundamental trade-off between sensitivity and precision. Specifically, for the most complex trait evaluated (240 QTLs under epistatic control), Ensemble methods (Bagging and Random Forest) maintained a Detection Power (DP) exceeding 90%, significantly outperforming state-of-the-art GWAS methods (FarmCPU), which dropped to approximately 30%, and traditional Linear Mixed Models, which failed to detect signals (0%). However, this sensitivity resulted in lower precision for ensembles. In contrast, MARS (Degree 1) and BLINK achieved exceptional Specificity (>99%) and Precision (>90%), effectively minimizing false positives. The real data analysis corroborated these trends: while standard GWAS models failed to detect significant associations, the ML framework successfully prioritized consensus genomic regions harboring functional candidates, such as SWEET sugar transporters and NAC transcription factors. In conclusion, ML Ensembles are recommended for broad exploratory screening to recover missing heritability, while MARS and BLINK are the most effective methods for precise candidate gene validation.

International Journal of Plant Biology doi: 10.3390/ijpb17010005

Authors: Aleksandra Yu. Kroupina Pavel Yu. Kroupin Mariya N. Polyakova Malak Alkubesi Alana A. Ulyanova Daniil S. Ulyanov Natalya Yu. Svistunova Alina A. Kocheshkova Gennady I. Karlov Mikhail G. Divashuk

Speed breeding technologies offer a promising avenue for accelerating crop improvement, yet their application to biennial crops like sugar beet remains constrained by extended generation cycles. This study examined the effects of supplemental phosphorus-potassium (PK) nutrition on the development of two hybrids under a speed-breeding protocol. Plants received one of four nutritional regimes: PK supplementation, potassium (K) supplementation, standard Knop’s solution (KS), or nutrient deficiency (D). Digital phenotyping confirmed that adequate nutrition maintained photosynthetic health, as deficiency significantly reduced NDVI and increased PSRI by 75 days. The most notable, genotype-specific effects were observed in reproductive architecture. PK nutrition significantly increased the median number of flower stalks by 17% in Smart Iberia KWS (21.0 vs. 18.0) and substantially in Dubravka KWS (33.0 vs. 1.0). PK also supported root development, increasing mini-steckling weight by 45–183% under white light. In the generative phase, plants under PK nutrition consistently showed the highest progression to flowering and capsule formation. A consistent increase in median 1000-seed weight of 24–36% was associated with PK treatment. In conclusion, supplementing standard nutrition with phosphorus and potassium enhances key yield-related architectural traits and supports reproductive development in sugar beet under speed-breeding conditions, with the magnitude of response depending on genotype. This provides a practical basis for optimizing mineral nutrition to improve the efficiency of accelerated breeding protocols. This provides a practical basis for optimizing mineral nutrition to improve the efficiency of speed breeding protocols.

International Journal of Plant Biology doi: 10.3390/ijpb17010004

Authors: Nikolay Velkov Stanislava Grozeva

Systems favoring cross-pollination, such as male sterility and female flowering type, are of great importance in the development of new hybrid cultivars and their seed production. The advantages of male sterility are expressed in the production of cheaper and competitive seeds. The presence of this characteristic in watermelon is not common, and in some cases, it is accompanied by negative manifestations. A collection of 150 watermelon genotypes was tested at the Maritsa Vegetable Crops Research Institute, Bulgaria, over the past nine years to search for a genetic source of male sterility. The results revealed that two mutations were found. The first mutation was in a plant of the Asar variety, which formed completely degenerated structures in the place of male and female flowers that were completely sterile. The other mutation affected male flowers, female flowers, and leaf shape. Male flowers produced a small amount of pollen. Female flowers were formed, but they were sterile and aborted at an early stage. The genotype can be propagated by pollination of the normal plants, which in the next generation segregate into mutant—25% and normal—75%. The gene source is phenotyped according to the main characteristics of the fruits and the vegetation period. The mutation found cannot be directly used in a breeding program, but it is of interest for studying this important trait. The success of detecting flowers that are sterile depends on the number of watermelon plants, which, for the conditions of the experiment, amounted to a minimum of 4492 plants at a probability level of P3—0.95.

International Journal of Plant Biology doi: 10.3390/ijpb17010003

Authors: Gilberto Garcia Fernando Montero Maria Elena Torres Selwyn Alvarez Wildo Vasquez Abraham Villantoy Yoel Ruiz Fernando Escobal Hector Cántaro-Segura Omar Paitamala Daniel Matsusaka

Purple corn (Zea mays L.) is a nutraceutical crop of increasing economic importance in Peru, yet its productivity is highly influenced by genotype × environment (G × E) interactions across heterogeneous agro-ecological zones. Therefore, selecting suitable genotypes for specific environments is essential to optimize variety deployment and maximize site-specific yield. Five purple-maize genotypes (INIA-601, INIA-615, Canteño, PMV-581, and Sintético-MM) were evaluated in four contrasting Peruvian sites using a randomized complete-block design. Grain yield, field weight, anthesis–silking interval (ASI), plant height, and ear-rot incidence were analyzed with combined analysis of variance (ANOVA), the additive main effects and multiplicative interaction (AMMI), genotype and genotype-by-environment (GGE) biplots, Weighted Average of Absolute Scores (WAAS), weighted average of absolute scores and best yield index (WAASBY), and Y × WAAS indices. Environment accounted for 90.1% of field-weight variation (p < 0.0001) and 50.2% of grain-yield variation (p < 0.001), while significant G × E interactions (3.93% and 18.14%, respectively) justified bilinear modeling. AMMI1 and GGE “which-won-where” biplots identified INIA-615 and PMV-581 as broadly adapted, with INIA-615 achieving the highest WAASBY and positioning in quadrant IV of Y × WAAS (high yield, high stability). INIA-601 and Sintético-MM exhibited exceptional stability (low ASV) but moderate productivity; Canteño showed limited adaptability. Chumbibamba emerged as a key discriminating, high-productivity location. From an agronomic perspective, INIA-615 is recommended for high-productivity valleys such as Sulluscocha and Santa Rita, where its yield potential and stability are maximized. These findings underscore the potential of integrating multivariate stability metrics with physiological and disease-resistance traits to guide the selection of superior purple corn cultivars. Overall, INIA-615 represents a robust candidate for enhancing yield stability, supporting sustainable intensification, and expanding the nutraceutical value chain of purple corn in the Andean highlands.

International Journal of Plant Biology doi: 10.3390/ijpb17010002

Authors: Zhuldyz Batykova Aida Kistaubayeva Malika Abdulzhanova Gulina Doktyrbay Laila Saidullayeva Zhamila Baimirzayeva Moldir Turaliyeva Zhuldyz Ibraimova

The increasing environmental challenges facing modern agriculture necessitate development of sustainable, eco-friendly alternatives to chemical inputs. This study aimed to isolate and characterize rhizophilic bacterial strains from the rhizosphere of the maize hybrid Turan 480 SV (Zea mays L.), with a focus on their plant growth-promoting and biocontrol traits. A total of 23 bacterial isolates were obtained, including 15 Gram-negative and 8 Gram-positive strains. Among these, three strains—CR14, CR18 and CR22—were selected for detailed analysis. All three demonstrated significant indole-3-acetic acid (IAA) production, phosphate and zinc solubilization, nitrogen fixation and antifungal activity. CR14 synthesized 56.01 mg L−1 of IAA and demonstrated the highest zinc solubilization, while CR18 exhibited superior phosphate solubilization and protease activity. CR22 produced the highest IAA (61.46 mg L−1) and demonstrated strong cellulase and amylase activity. In antagonism tests, CR14 suppressed Alternaria alternata with an 80 mm inhibition zone, while CR18 and CR22 effectively inhibited both A. alternata and Fusarium graminearum. Phylogenetic analysis based on 16S rRNA sequencing identified CR18 as Serratia quinivorans, CR14 as Pantoea agglomerans and CR22 as Pantoea sp. The functional diversity of rhizobacteria holds promise as bioinoculants for enhancing maize growth and protecting against soil-borne pathogens in sustainable agriculture.

International Journal of Plant Biology doi: 10.3390/ijpb17010001

Authors: Isaac Theophile Ndjepel Yetnason Adrian Christopher Brennan Dorothy Tchatchoua Tchapda Chimene Abib Fanta

(1) Background: In the Sudano-Sahelian zone of Cameroon, which is affected by drought and forest decline, Vachellia nilotica leaves and seeds are fodder for livestock. (2) Methods: A provenance and progeny study on growth performance and heritability of V. nilotica was carried out to provide a reliable database for tree selection, improvement programs, and the creation of future forested areas in this region. Open-pollinated seeds from 120 mother trees (10 half-sib families per provenance) representing twelve provenances, 50–100 km apart, were used for a progeny trial near Maroua, the Far North region of Cameroon. The experimental design was a Fisher block. (3) Results: The results reveal significant differences among provenances only for the number of leaves, and the variability was marked by coefficients of variation ranging from 0.24−0.63. Narrow-sense heritability was measured, varying from 0.01 ± 0.009 to 0.74 ± 0.02, and genetic gain reached 21.83 at the selection intensity of 5% for the number of leaves per plant. The phenotypic coefficient of variation varied between 14% and 90%. Half-sib families were classified into three subgroups using hierarchical ascending classification, and provenances were grouped into five groups using principal component analysis. (4) Conclusions: These results could contribute to initiating tree selection, but more provenances, longer-term experiments, and molecular genetic testing are needed to complement these nursery-level observations.

International Journal of Plant Biology doi: 10.3390/ijpb16040142

Authors: Angel F. Huaman-Pilco Nicola Fiore Oscar P. Hurtado-Gonzales Larissa Carvalho Costa Xiaojun Hu Manuel Oliva-Cruz Jorge R. Díaz-Valderrama Alan Zamorano

Preserving Peruvian cacao germplasm requires preventing the spread of pathogens such as viruses, yet cacao viral diseases in Peru remain poorly studied. In this study, we characterized the viral sequences associated with native cacao trees from the department of Amazonas, northwestern Peru. Leaf samples from two symptomatic plants (mosaic, yellowing, leaf deformation) and one asymptomatic plant were collected from the cacao germplasm bank of the Universidad Nacional Toribio Rodríguez de Mendoza de Amazonas. RNA high-throughput sequencing identified four RNA segments consistent with the genus Emaravirus: RNA1 (7142 nt; replicase P1), RNA2 (2225 nt; glycoprotein P2), RNA3 (1269 nt; nucleocapsid P3), and RNA4 (1286 nt; movement protein P4), sharing 32.6–45.9% amino acid identity with European mountain ash ringspot-associated emaravirus (EMARaV). Phylogenetic analysis of P1–P4 proteins placed this virus in a distinct lineage, confirming it as a novel species, Theobroma cacao emaravirus A (ThCEV-A). Specific RT-PCR detected ThCEV-A in 11 additional accessions, with symptoms including yellow mosaic and mottling. This study documents for the first time the presence of a novel Emaravirus in cacao, highlighting the need to assess its epidemiology, vector(s), and potential impact on cacao production in its center of origin.

International Journal of Plant Biology doi: 10.3390/ijpb16040141

Authors: Rongrong Tan Long Jiao Peizhuo Wu Danjuan Huang Hongjuan Wang Xun Chen Yingxin Mao

The tea plant (Camellia sinensis (L.) O. Kuntze) is a globally important crop, yet its cultivation is continually challenged by a range of viral pathogens that can compromise plant health and product quality. In this study, eighteen symptomatic leaves were collected from the Hubei Province Tea Germplasm Resources Nursery, China, representing multiple cultivars and diverse genetic backgrounds. The samples were pooled into three groups and subjected to ribodepleted transcriptome sequencing. Analyses revealed a complex virome, with Tea plant necrotic ring blotch virus (TPNRBV) dominating Pools A and B, whereas Badnavirus betacolocalasiae was the most prevalent in Pool C. Functional enrichment of viral genes indicated involvement in multiple biological processes, including replication, host interaction, and metabolism. Notably, two previously uncharacterized viruses were identified: Tea plant-associated ourmia-like virus 1 (TeaOLV1) and Tea plant-associated rhabdo-like virus 1 (TeaRLV1). Phylogenetic reconstruction positioned TeaOLV1 within the Penoulivirus genus, while TeaRLV1 formed a distinct clade among plant-associated rhabdoviruses. Conserved motif analysis revealed typical viral domains, accompanied by lineage-specific variations in tea plants. Collectively, these findings enhance our understanding of the viral diversity in tea plants, provide refined taxonomic placement for newly identified viruses, and offer molecular insights into their evolutionary relationships and potential functional roles.

International Journal of Plant Biology doi: 10.3390/ijpb16040140

Authors: Ryan Koeth Shahzad Hussain Shah Calvin Juel Rigney Changbin Chen

Zingeria biebersteiniana, a grass species with the lowest known chromosome number among angiosperms (2n = 2x = 4), offers a distinctive platform for cytogenetic and grass research. Despite its unique karyotype and potential for molecular and educational applications, no transformation system has previously been reported for this species. Here, we establish a reproducible Agrobacterium tumefaciens-mediated transformation protocol for Z. biebersteiniana, optimized through comparative evaluation of three tissue culture media. A modified Khromov medium with Plant Preservative Mixture supported robust callus induction and plant regeneration, enabling the successful introduction of a GFP–mouse talin1 fusion construct driven by the rice Actin-1 promoter. Transgenic lines were validated via PCR amplification of the hygromycin resistance gene, and GFP signals were observed in transformed individuals. However, the expression pattern was less specific than previously reported in rice, potentially due to species-specific differences in mouse Talin1 protein localization. Although actin filament visualization in mature pollen remained unspecific, the protocol provides a foundational tool for future molecular and functional genomics and genetics studies. This work represents the first documented genetic transformation of Z. biebersteiniana, expanding its utility as a model system in plant biology and genomics.

International Journal of Plant Biology doi: 10.3390/ijpb16040139

Authors: Jamille Cardeal da Silva Jailton de Jesus Silva Raquel Araujo Gomes Claudinéia Regina Pelancani Cruz Barbara França Dantas

Commiphora leptophloeos, a native Caatinga species with economic and medicinal potential, faces propagation challenges due to seed dormancy and extractive use. The germination test, the official method for seed quality assessment, is time-consuming, whereas the tetrazolium test (TZT) offers a rapid alternative for determining seed viability. This study aimed to establish and validate a TZT protocol for C. leptophloeos seeds. Seeds collected in 2025 were extracted after natural fruit drying and then stored in a cold chamber. The germination test was conducted with seeds without pyrenes at 30 °C. For the TZT, a completely randomized design was used in a 6 × 4 factorial scheme (six TZT concentrations × four immersion times), with adjustments in seed preparation and staining procedures. Higher concentrations (0.5% and 0.75%) combined with shorter immersion periods (2 h) provided the best results, especially 0.75% for 2 h, which yielded 89% viability. Very low concentrations combined with short periods resulted in little or no staining. Compared with the germination test (35%), the TZT showed greater sensitivity in detecting viable seeds. We conclude that the TZT is highly efficient for assessing the viability of C. leptophloeos seeds, with optimal responses at 0.5–0.75% TTC and 2–4 h immersion periods, and represents a strategic tool to support the conservation and sustainable use of this species.

International Journal of Plant Biology doi: 10.3390/ijpb16040138

Authors: Alicia A. Ibarra-Moguel Marcos E. Cua-Basulto Alejandra González-Moreno Esaú Ruiz-Sánchez Jehú G. Noh-Kú Adrián I. Fernández-Basto René Garruña

The objective of this study is to evaluate the effects of botanical oils on the mortality of the phytophagous mite Tetranychus urticae, the predatory mite Amblyseius swirskii, and on gas exchange in papaya seedlings. Two vegetable oils (soybean and corn), two essential oils (lavender and oregano), a synthetic pesticide (abamectin), and a control (water) were evaluated on papaya seedlings infested with T. urticae. In laboratory assays, within the first day after application, abamectin caused 100% mortality of T. urticae adults, followed closely by soybean (96%), corn (94.7%), and lavender (94.7%) oils. In A. swirskii, abamectin caused 100% mortality within 24 h; at 72 h, corn and lavender oils reached 96%, while oregano oil caused the least mortality (67.3%). In field trials, both abamectin and botanical oils statistically reduced eggs per leaf 24 h after application relative to the control, and a similar pattern was observed for nymphs 48 h after treatment. Botanical oils equaled abamectin in T. urticae adult suppression by 72 h, and soybean caused complete adult mortality by day 14. Regarding gas exchange, abamectin significantly affected the photosynthesis and transpiration processes. Thus, botanical oils represent viable biorational options for managing T. urticae in papaya, with lower ecological and physiological costs than abamectin.

International Journal of Plant Biology doi: 10.3390/ijpb16040137

Authors: Hattie Hope Makumbe Theoneste Nzaramyimana Richard Kabanda George Fouad Antonious

Watercress is a nutrient-dense, aquatic leafy vegetable with significant public health and economic potential. Hydroponically cultivated watercress can offer greater nutritional benefits due to the controlled delivery of specific nutrients. From an agronomist’s perspective, watercress has the advantage of optimized environmental resource efficiency, achieved through reduced energy, chemical, and water consumption, as well as its short cultivation cycle. Glucosinolates (GSLs) in watercress enhance sustainable agriculture by naturally protecting crops from pests and diseases, reducing the need for chemical inputs. They also increase market value and shelf-life, supporting resource-efficient and profitable farming. Within the pharmaceutical space, GSLs are well-known for their chemo preventive and anti-inflammatory properties. This review aims to summarize research findings, critically evaluate existing studies to highlight current knowledge, and identify research gaps, and to guide future investigations. The synthesis of the reviewed literature demonstrates that increased sulphate generally improves GSL content. However, not many studies have looked specifically at how magnesium sulphate (MgSO4) affects watercress. This review highlights the specific impact of MgSO4 on GSL production in watercress, which could provide valuable insights for optimizing nutrient management in hydroponic systems and enhancing the health benefits of this nutrient-dense crop.

International Journal of Plant Biology doi: 10.3390/ijpb16040136

Authors: Gabriela Cárdenas-Huamán Henry Morocho-Romero Sebastian Casas-Niño Sandy Vilchez-Navarro Leslie D. Velarde-Apaza Max Ramirez-Rojas Juancarlos Cruz Flavio Lozano-Isla

Potato (Solanum tuberosum L.) is the third most important food crop worldwide and a cornerstone of food security across the Andean region. However, its production is increasingly threatened by the potato psyllid Bactericera cockerelli (Šulc), the vector of Candidatus Liberibacter solanacearum, the causal agent of the purple-top complex associated with zebra chip disease, which severely reduces both tuber yield and quality. This study was conducted from September 2024 to February 2025 in the province of Huancabamba, Peru, to evaluate the efficacy of biological and chemical control agents against B. cockerelli under field conditions. A randomized complete block design was implemented with five treatments and four replicates, totaling 20 experimental units, each consisting of 20 potato plants (S. tuberosum L.), of which 10 plants were evaluated. Treatments included an untreated control (T0), a chemical control (thiamethoxam + lambda-cyhalothrin, abamectin, and imidacloprid) (T1), and three biological control agents: Beauveria bassiana CCB LE-265 (>1.5 × 1010 conidia g−1) (T2), Paecilomyces lilacinus strain 251 (1.0 × 1010 conidia g−1) (T3), and Metarhizium anisopliae (1.0 × 1010 conidia g−1) (T4). Foliar applications targeted eggs, nymphs, and adults of the psyllid. Results indicated that B. cockerelli mortality across developmental stages was lower under biological treatments compared with T1, which achieved the lowest probability of purple-top symptom expression (46%) and a zebra chip incidence of 60.60%. Among the biological agents, M. anisopliae (T4) reduced incidence to 56.60%, while P. lilacinus (T3) demonstrated consistent suppression of nymphal populations. In terms of yield, T1 achieved the highest tuber weight (198.86 g plant−1) and number of tubers (7.74 plant−1), followed by T3 (5.08) and T4 (4.24). Nevertheless, all treatments exhibited low yields and small tuber sizes, likely due to unfavorable environmental conditions and the presence of the invasive pest. Overall, chemical control was more effective than biological agents; however, the latter showed considerable potential for integration into sustainable pest management programs. Importantly, vector suppression alone does not guarantee the absence of purple-top complex symptoms or zebra chip disease in potato tubers.

International Journal of Plant Biology doi: 10.3390/ijpb16040135

Authors: Wagner Meza-Maicelo César R. Balcázar-Zumaeta Henry W. Santillan Culquimboz Manuel Oliva-Cruz Flavio Lozano-Isla

Common bean (Phaseolus vulgaris L.) is a cornerstone of global food security, yet its production is persistently challenged by biotic and abiotic stresses. This study conducted a bibliometric analysis following PRISMA guidelines on 549 documents published between 1971 and mid-2025, using Biblioshiny, VOSviewer, and CiteSpace. Results reveal a scientific output concentrated in leading institutions such as Michigan State University (MSU, USA) and the International Center for Tropical Agriculture (CIAT, Colombia). Collaboration networks are dominated by influential authors including Beebe, S. and Kelly, J.D., with Euphytica and Crop Science emerging as primary publication outlets. Research trends highlight salinity tolerance, oxidative stress, and chromosomal mapping, where advanced technologies such as SNP chips have supplanted RAPD markers. Critical challenges remain, including limited phenotyping capacity and the complexity of polygenic resistance, with urgent implications for developing countries where beans are vital for food security but face barriers to technology adoption and restricted participation in global research networks. Concurrently, mitigation strategies have shifted toward sustainable approaches, incorporating beneficial microorganisms for biotic stress and bio-stimulants or plant extracts for abiotic stress. Since 2020, the field has increasingly embraced multifunctional strategies leveraging natural mechanisms to enhance crop resilience. This analysis offers a comprehensive knowledge base to guide future research agendas.

International Journal of Plant Biology doi: 10.3390/ijpb16040134

Authors: Sebastian Casas-Niño Sandy Vilchez-Navarro Henry Morocho-Romero Gabriela Cárdenas-Huamán Esdwin-Oberti Nuñez-Ticliahuanca Ana-Gabriela Montañez-Artica Leslie Velarde-Apaza Max Ramirez Rojas Juan Carlos Rojas Flavio Lozano-Isla

Mango (Mangifera indica L.) is a tropical fruit tree characterized by vigorous growth and high fruit production, making it one of Peru’s main export crops. However, its extensive vegetative development requires substantial space, limiting productivity per unit area. This study evaluated the effects of rootstock and interstock combinations on agronomic traits and fruit biometrics, highlighting the potential of interstocks to modulate tree vigor in mango orchards of Peru’s dry forest region. A total of 216 trees were established using ‘Chulucanas’ and ‘Chato’ as rootstocks and ‘Chulucanas,’ ‘Chato,’ ‘Irwin,’ and ‘Julie’ as interstocks, apically grafted with the ‘Kent’ cultivar, with a spacing of 6.0 m × 6.0 m. Tree performance was assessed after 10 years during the 2017–2019 growing seasons in Piura, Peru, under a randomized complete block design (2 × 4 factorial). The combination of the ‘Chulucanas’ rootstock with ‘Chulucanas’ and ‘Julie’ interstocks reduced tree height by 10.94% and 11.70%, respectively, facilitating orchard management and potentially increasing planting density. Yield varied significantly among growing seasons, with a 15% reduction in 2017 attributed to El Niño–Southern Oscillation (ENSO)-related increases in temperature and rainfall that affected flowering and fruit set. These results underscore the importance of cultivar selection and climate-adaptive strategies to sustain mango productivity in regions prone to climatic variability.

International Journal of Plant Biology doi: 10.3390/ijpb16040133

Authors: Rotondwa Rabelani Sinthumule Charlie Sithole Joseph Lesibe Gaorongwe Kegomoditswe Martha Matebele Oziniel Ruzvidzo Tshegofatso Bridget Dikobe

Maize is not only a staple across the sub-Saharan Africa (SSA) region but also a substantially economically valuable cereal crop. As a seasonal crop, its successful cultivation depends on favorable rainfall patterns and climatic conditions. However, environmental stresses such as drought limit its productivity. Enhancing stress resilience requires understanding the morphological, physiological, and proteomic response mechanisms that contribute to drought tolerance. Hence, it is critical to understand its adaptive capacity at the protein level to achieve improved stress-tolerant cultivars and increased yields in the future. Our study investigated drought stress responses in a drought-tolerant maize cultivar subjected to polyethylene glycol (PEG)-induced water deficit, combining one-dimensional gel electrophoresis (1DE) with LC-MS/MS to profile the leaf proteome. From the analysis, 50 of the 439 identified maize leaf proteins were further studied due to their significant differential expression and functional relevance, revealing the interconnection between the proteomic patterns as well as the morphological and physiological responses that enable drought resilience. These insights provide a foundation for improving stress-tolerant maize cultivars through integrative characterization approaches.

International Journal of Plant Biology doi: 10.3390/ijpb16040132

Authors: Isaac O. Abegunde Oghenevwairhe P. Efekemo Olabode Onile-Ere Folashade Otitolaye Olusegun A. Oduwaye Thomas O. Fabunmi Emmanuel O. Idehen Justin S. Pita Fidèle Tiendrébéogo Titus Alicai Angela O. Eni

Understanding the genetic variability among Nigerian cassava accessions is a crucial prerequisite for its improvement. The objective of this study was to estimate the genetic variability among 477 cassava accessions and to classify them based on their genetic similarities for effective utilization in breeding programs. The accessions were evaluated at the Federal University of Agriculture, Abeokuta experimental site from 2023–2024, using an augmented randomized complete block design with two checks (TME 419 and NR 87184). Agromorphological descriptors were collected at 3-month intervals for 12 months. Broad sense heritability and genetic advance as percent of mean (GAM) were high, indicating that the overall phenotypic expressions observed were largely influenced by genetic factors. Multiple correspondence analysis (MCA) showed that petiole color, number of leaf lobes, color of leaf veins, and parenchyma contributed the most to the overall variability observed in the study population. Principal component analysis (PCA) identified petiole length, length of leaf lobe, width of leaf lobe, and plant height as primary contributors to the overall phenotypic variations observed in the population. Hierarchical clustering of accessions using Euclidean distance revealed two and three clusters based on qualitative and quantitative traits respectively. This study has shown the existence of wide genetic variations in several cassava traits, providing a valuable resource for breeding programs.

International Journal of Plant Biology doi: 10.3390/ijpb16040131

Authors: Md. Jahirul Islam Byung Ryeol Ryu Tanjina Alam Masuma Akter Mou Md. Hafizur Rahman Md. Abdus Salam Young-Seok Lim Mohammad Anwar Hossain

Salinity stress is a major constraint on the growth and productivity of sugar beet (Beta vulgaris L.). This study evaluated the potential of exogenously applied putrescine (Put) and salicylic acid (SA) to enhance salt stress tolerance. Thirty-day-old seedlings were grown for seven days under control conditions before being subjected to eight treatments for 10 days: (i) Control, (ii) Control + 0.6 mM Put, (iii) Control + 0.6 mM SA, (iv) Control + 0.6 mM Put + 0.6 mM SA, (v) Salinity (150 mM NaCl), (vi) Salinity + 0.6 mM Put, (vii) Salinity + 0.6 mM SA, and (viii) Salinity + 0.6 mM Put + 0.6 mM SA. Put and SA were applied once as a foliar spray at the onset of the treatments. Salt stress significantly reduced plant growth, biomass, chlorophyll content, and photosynthetic efficiency, while increasing reactive oxygen species (particularly H2O2) and lipid peroxidation. Foliar applications of Put and SA alleviated these adverse effects, either individually or in combination. Put primarily enhanced plant growth rate, shoot length, plant height, shoot and root biomass, leaf relative water content, respiration activity, and sucrose accumulation. SA improved root length, photosynthetic activity, water-use efficiency, and proline accumulation. When applied together, Put and SA combinedly increased growth rate, shoot length, plant height, shoot biomass, leaf relative water content, stomatal conductance, and the maximum quantum yield of PSII, while more prominently reducing malondialdehyde and H2O2 accumulation and enhancing antioxidant enzyme activities. These findings suggest that foliar application of Put and SA enhances salinity tolerance in sugar beet seedlings by improving antioxidant enzyme activities, osmolyte accumulation, and ion homeostasis, thereby mitigating oxidative stress under saline conditions. This outcome could contribute to potential applications in breeding programs and stress management in saline-prone regions.

International Journal of Plant Biology doi: 10.3390/ijpb16040130

Authors: Floris C. Breman Joost Korver Ronald Snijder M. Eric Schranz Freek T. Bakker

Following publication, concerns were raised to the Editorial Office relating to a potential conflict of interest between one of the authors and the Academic Editor that supervised the peer-review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040129

Authors: Abdullateef Mustapha Abdul Hakeem Shaonan Li Ghulam Mustafa Essam Elatafi Jinggui Fang Cunshan Zhou

Salinity is a long-standing global environmental stressor of terrestrial agroecosystems, with important implications for viticulture sustainability, especially in arid and semi-arid environments. Salt-induced physiological and biochemical disruptions to grapevines undermine yield and long-term vineyard sustainability. This review aims to integrate physiological, molecular, and omics-based insights to elucidate how grapevine rootstocks confer salinity tolerance and to identify future breeding directions for sustainable viticulture. This review critically assesses the ecological and molecular processes underlying salt stress adaptation in grapevine (Vitis spp.) rootstocks, with an emphasis on their contribution to modulating scion performance under saline conditions. Core adaptive mechanisms include morphological plasticity, ion compartmentalization, hormonal regulation, antioxidant defense, and activation of responsive genes to stress. Particular emphasis is given to recent integrative biotechnological developments—including transcriptomics, proteomics, metabolomics, and genomics—that reveal the intricate signaling and regulatory networks enabling rootstock-mediated tolerance. By integrating advances across eco-physiological, agronomic, and molecular realms, this review identifies rootstock selection as a promising strategy for bolstering resilience in grapevine production systems confronted by salinization, a phenomenon increasingly exacerbated by anthropogenic land use and climate change. The research highlights the value of stress ecology and adaptive root system strategies for alleviating the environmental consequences of soil salinity for perennial crop systems.

International Journal of Plant Biology doi: 10.3390/ijpb16040128

Authors: Milena Maria Tomaz de Oliveira Noemi Tel-Zur Francisca Gislene Albano-Machado Daniela Melo Penha Monique Mourão Pinho Marlos Bezerra Maria Raquel Alcântara de Miranda Carlos Farley Herbster Moura Ricardo Elesbão Alves William Natale Márcio Cleber de Medeiros Corrêa

Hylocereus species are promising for enhancing fruit productivity in arid regions, but high solar radiation often leads to yield loss. This study aimed to evaluate the short-term impact of different shading levels on the physiological performance, productivity, and post-harvest quality of Hylocereus costaricensis under semi-arid conditions. Plants were grown in the field under two shade levels, i.e., 35 and 50% and their performances were compared to plants under control, i.e., 0% of shade or full sunlight. The nighttime CO2 assimilation and productivity increased significantly by 310.5 and 114.6% and 34.3 and 50.14% for plants under 35 and 50% of shade, respectively, compared to the control. A Principal Component Analysis (PCA) revealed that shade enhanced skin betalain (BETS) and phenolic content (PETP), whereas non-shaded plants expressed traits more closely associated with plant and fruit photoprotective pigment synthesis, i.e., total carotenoids and yellow flavonoids, respectively, along with total sugar accumulation, underscoring the significant impact of shading on both metabolic activity and overall agronomic outcomes. Shading within the 35% to 50% range is effective to cope with high solar radiation by improving photosynthetic capacity, productivity, and post-harvest quality, especially regarding the accumulation of pigments such as betalains, indicating that shade as an agro-technique is a valuable approach for the cultivation of Hylocereus species in dryland regions.

International Journal of Plant Biology doi: 10.3390/ijpb16040127

Authors: Alexandra Pacheco-Andrade María Elena Torres Hector Cántaro-Segura Luis Díaz-Morales Daniel Matsusaka

Durum wheat (Triticum durum Desf.) underpins semolina value chains in water-limited regions, yet Peru remains import-dependent due to constrained local adaptation. We evaluated eleven elite lines plus the commercial variety ‘INIA 412 Atahualpa’ across three contrasting semi-arid sites in Arequipa (Santa Elena, San Francisco de Paula, Santa Rita) during 2023–2024 to identify genotypes maximizing performance and stability. Grain yield, thousand-kernel weight (TKW), hectoliter weight, and plant height were analyzed with combined analysis of variance (ANOVA), the additive main effects and multiplicative interaction (AMMI) and genotype and genotype-by-environment (GGE) biplots, complemented by AMMI stability value (ASV) and weighted average of absolute scores and best yield index (WAASBY). Grain yield and hectoliter weight showed significant genotype × environment (G × E) interaction, while plant height was driven mainly by genotype and environment with limited interaction. For grain yield, AMMI (PC1: 55.2%) and GGE (PC1 + PC2: 90.2%) revealed crossover responses and three practical mega-environments: TD-053 “won” at San Francisco de Paula, TD-037 at Santa Elena, and TD-033 at Santa Rita. Additionally, WAASBY-integrated rankings favored TD-033 (93.7%) and TD-014 (84.72%), followed by TD-026/TD-020 (>57%), whereas TD-062 (9.1%) and TD-043/TD-061 underperformed. Quality traits highlighted TD-044 and TD-014 for high hectoliter weight and TD-014/TD-062 for high TKW with contrasting stability. Overall, TD-033 and TD-014 were adaptable across environments, providing selection guidance to strengthen Peru’s durum breeding pipeline under climate variability.

International Journal of Plant Biology doi: 10.3390/ijpb16040126

Authors: Katia Spinella Lorenza Dalla Costa Davide La Rocca Sara Ciuffa Daniela Verginelli Umar Shahbaz Pierre Videau Olivier Zekri Ugo Marchesi

In recent years, CRISPR-Cas9 technology has become a powerful and indispensable tool for targeted mutagenesis in plants, including applications such as gene knockout, prime-editing, multiplex gene editing, and regulation of gene transcription. As the number of potential genome editing approaches expands at a very fast pace, rapid, efficient, and cost-effective analytical strategies are needed to screen large numbers of mutants, including the detection of off-target events. In this study, we reported a detection method based on High-Resolution Melting (HRM) analysis to discriminate between wild-type (wt) and edited lines of different varieties of Vitis vinifera and grapevine rootstocks. Those edited lines were obtained through Agrobacterium tumefaciens mediated transformation of embryogenic calli using the CRISPR/SpCas9 system and targeting VviEPFL9-1 and VviEPFL9-2, two paralogous genes involved in stomata cell fate induction. The method clearly distinguished between the wt allele and the mutated one and was partially effective in distinguishing different types of mutation. Moreover, HRM data elaboration based on a Principal Component Analysis (PCA) allowed one to group populations of lines which originated from the same transformation event. Our study demonstrates the reliability of HRM as a fast and cost-effective diagnostic tool for the screening of edited lines and the evaluation of off-target events.

International Journal of Plant Biology doi: 10.3390/ijpb16040125

Authors: Joanna N. Kalatskaja Natallia V. Baliuk Katsiaryna I. Rybinskaya Kanstantsin M. Herasimovich Ninel A. Yalouskaya Lubov G. Yarullina Vyacheslav O. Tsvetkov

Following publication, concerns were raised to the editorial office relating to a potential conflict of interest between the authors and the Academic Editors that supervised the peer-review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040124

Authors: Edgard Augusto de Toledo Picoli Weverton Gomes da Costa Josimar dos Santos Ladeira Franciely Alves Jacomini Maria Naruna Felix Almeida Alaina Anne Kleine Graziela Baptista Vidaurre Jordão Cabral Moulin Kelly M. Balmant Paulo Roberto Cecon Edival Ângelo Valverde Zauza Lucio Mauro da Silva Guimarães

Eucalyptus plantation forests play an important role in the global trade balance, and have been challenged with the Eucalypt Physiological Disorder (EPD) exhibiting symptoms on barks. Despite of that, there is little information on the anatomical features of phloem and periderm associated with this disorder. Although tolerant and susceptible commercial clones exhibited similar anatomical structures, they differed in the proportions of conducting and total phloem tissue and the amount of phloem containing Calcium oxalate (CaOx) crystals. The frequency and diameter of sieve tube elements (STEs) also varied among the tested clones. The increased area of phloem with non-collapsed STE and CaOx crystals were linked to the EPD tolerant phenotype. Bark, secondary phloem, and periderm thickness were correlated with EPD scores. Structural characteristics of phloem cells is correlated with increasing stem diameter. Bark and phloem thickness exhibited significant and positive associations with EPD-tolerant clones and stem diameter, while negative correlations with EPD scores. These connections corroborate the positive impact of increasing the proportion of total phloem thickness on stem diameter growth and EPD tolerance. The present results were based on restricted, yet commercially important, Eucalyptus species (E. grandis, E. urophylla and E. grandis × E. urophylla hybrids) highlighting bark and phloem traits linked to plant growth and EPD tolerance.

International Journal of Plant Biology doi: 10.3390/ijpb16040123

Authors: Shimaa Hosny Gaber Ahmed H. A. Mansour Ghada Abd-Elmonsef Mahmoud Mohamed Hefzy

This study aims to identify the most effective irrigation rates for Manfalouty pomegranate trees to enhance their growth, yield, bioactive compound content, and fruit quality. Additionally, the research evaluates the effects of foliar spray applications of glycine, ascorbic acid, and riboflavin on the physiological responses of the trees. Morphological, physiological impacts, and fruit quality treatments were analyzed using Pearson correlation and cluster analysis. As irrigation levels were reduced up to 60%, all vegetative characters demonstrated a significant drop. Glycine treatment enhanced yielding shoot lengths, leaf area, and leaf number. Among the key findings was that there were no appreciable variations between 100% ETc and 80% ETc with riboflavin or glycine spraying for leaves total chlorophyll. Leaves treated with glycine, ascorbic acid, and riboflavin spraying had higher levels of total antioxidants, total phenols, and total flavonoids, while glycine gives the highest results and enhanced the antioxidant system of pomegranate leaves. Reducing irrigation from 100% to 60% ETc in both seasons, respectively, resulted in a progressive decrease in yield (ton/fed.), and fruit creaking (%); this effect was overcome using the glycine foliar spraying. The results also demonstrated that all spray treatments reduced the cracking rate, with the glycine spray treatment being the most effective in this respect that enhanced also fruit length, fruit diameter, fruit weight, and arils weight %, total soluble solids, total sugar, anthocyanin, vitamin C, and the antioxidant contents. The findings provide valuable insights for sustainable pomegranate cultivation practices that maximize productivity and quality while maintaining plant health using low irrigation and glycine as foliar sprayer.

International Journal of Plant Biology doi: 10.3390/ijpb16040122

Authors: Unius Arinaitwe Dalitso Noble Yabwalo Abraham Hangamaisho

The escalating challenges of climate change, soil degradation, and the need to ensure global food security are driving the transition towards more sustainable agricultural practices. Biostimulants, a diverse category of substances and microorganisms, have emerged as promising tools to enhance crop resilience, improve nutrient use efficiency (NUE), and support sustainable intensification. However, their widespread adoption is hampered by significant variability in efficacy and a lack of consensus on their optimal use. This comprehensive review synthesizes current scientific knowledge to critically evaluate the performance of biostimulants within sustainable agricultural systems. It aims to move beyond isolated case studies to provide a holistic analysis of their modes of action, efficacy under stress, and interactions with the environment. The analysis confirms that biostimulant efficacy is inherently context-dependent, governed by a complex interplay of biological, environmental, and management factors. Performance variability is explained by four core principles: the Limiting Factor Principle, the Biological Competition Axiom, the Stress Gradient Hypothesis, and the Formulation and Viability Imperative. A significant disconnect exists between promising controlled-environment studies and variable field results, highlighting the danger of extrapolating data without accounting for real-world agroecosystem complexity. Biostimulants are not universal solutions but are sophisticated tools whose value is realized through context-specific application. Their successful integration requires a precision-based approach aligned with specific agronomic challenges. We recommend that growers adopt diagnostic tools and on-farm trials, while producers must provide transparent multi-location field data and invest in advanced formulations. Future research must prioritize field validation, mechanistic studies using omics tools, and the development of crop-specific protocols and industry-wide standards to fully unlock the potential of biostimulants for building resilient and productive agricultural systems.

International Journal of Plant Biology doi: 10.3390/ijpb16040121

Authors: Leandro Sousa e Silva César Augusto Ticona-Benavente

Cocona (Solanum sessiliflorum Dunal) is an underutilized Amazonian fruit species with significant food, nutritional, and economic potential, but its genetic improvement remains limited. This study aimed to estimate the heritability of 13 morpho-agronomic traits in two F2 populations, assess the efficiency of early visual selection, and identify traits associated with fruit yield. Approximately 250 plants from each population were grown in the Central Amazon. One week before the first harvest, plants were visually screened for yield potential, and the selected individuals were further evaluated for fruit traits. Broad-sense heritability (h2) was significant for most traits; the highest values were for number of flowers per plant (h2 = 0.88), petiole length (h2 = 0.87), collar diameter (h2 = 0.71), canopy diameter (h2 = 0.58), and fruit length (h2 = 0.55). Early visual selection achieved ~65% efficiency. Fruit yield was correlated strongly and positively with the number of fruits per plant. These results indicate that phenotypic selection is effective for improving key plant and fruit traits in cocona. Early visual selection can be used to identify high-yielding individuals and the number of fruits per plant can be used as a complementary criterion to enhance selection accuracy for fruit yield.

International Journal of Plant Biology doi: 10.3390/ijpb16040120

Authors: Rodrigo Gonzales César Augusto Ticona-Benavente José Ramirez-Chung Johnny Campos-Cedano José Jesús Tejada-Alvarado

This study evaluated the suitability of three floodplain environments near Iquitos for cowpea cultivar recommendations and estimated the adaptability and phenotypic stability of 12 cowpea lines evaluated in 2004. Climatic conditions between 2004 and 2020–2024 were also compared. Three field trials used a randomized complete block design with 12 lines and two replications, assessing grain yield, number of pods per plant, days to flowering, days to 50% maturity, and days to harvest. Combined Analysis of Variance (ANOVA), Duncan’s means test, Genotype + Genotype Environment Interaction (GGE) biplot, and Additive Main Effects and Multiplicative Interactions Interaction (AMMI) analyses revealed that the three sites are contrasting. The Annicchiarico index, GGE biplot, and AMMI analyses identified line CAR 3010 as having superior adaptability and stability. Paired t-tests and Mann–Kendall analyses showed that climatic conditions in 2020–2024 differed significantly from 2004. Therefore, Muyuy, Rafael Belaunde, and San Miguel are suitable locations for testing advanced cowpea lines prior to cultivar recommendation. Line CAR 3010 is recommended for breeding programs in the Peruvian Amazon in response to ongoing climate change. This research addresses a critical knowledge gap as the first study evaluating cowpea adaptability and stability across multiple floodplain locations in the Peruvian Amazon.

International Journal of Plant Biology doi: 10.3390/ijpb16040119

Authors: Maltase Mutanda Sandiswa Figlan

Wheat production and grain quality are adversely affected by drought stress. The deployment of wheat genotypes with improved grain yield and grain quality assists in achieving food security and maintaining a balanced diet. Therefore, this study is aimed at evaluating the phenotypic traits and grain quality responses of wheat genotypes to drought-stressed conditions. Two field trials were conducted to evaluate ten wheat genotypes under drought-stressed (DS) and non-stressed (NS) conditions in 2022 and 2023. The grains of the genotypes were further evaluated for their quality. The recorded phenotypic traits include grain yield (GY), shoot biomass (SB), root biomass (RB), and harvest index (HI). The grain quality traits recorded were grain carbon content (C), nitrogen (N), and crude protein (CP). Significant (p < 0.05) genetic variation were observed for the recorded phenotypic and grain quality traits. The highest grain yield was recorded in LM48 (495.83 g m−2), and the least was observed in BW141 (131.48 g m−2) under DS conditions. The N ranged from 1.76% recorded in LM75 to 3.16% (BW141) under DS conditions. The wheat genotypes, LM48 and BW140, presented high harvest index percentages, which indicates that the genotypes were efficient in partitioning their biomass to GY production even under DS conditions. The overall mean values of C and CP were lower under DS than NS conditions. Furthermore, GY was positively associated with SB (r = 0.50 under DS; r = 0.49 under NS) and RB (r = 0.38 under DS conditions; r = 0.32 under NS conditions). Amongst all the evaluated quality traits, only CP was negatively correlated with GY (r = −0.02) under DS conditions. Based on high GY production performance under DS conditions, the wheat genotypes LM48 and BW140 are recommended for further evaluation across diverse environments and production under limited water conditions.

International Journal of Plant Biology doi: 10.3390/ijpb16040118

Authors: Astra Jēkabsone Una Andersone-Ozola Lidia Banaszczyk Gederts Ievinsh

Soil mineral nutrient heterogeneity is a distinctive characteristic of coastal habitats, yet its impact on plant growth and development remains uncertain. The objective of the present study was to establish an experimental system for evaluating the influence of mineral nutrient availability on the development of three distinct short-lived wild coastal plant species: Phleum arenarium, Plantago coronopus, and Ranunculus sceleratus. These plants were cultivated in containers of different volumes employing an inert substrate with varying proportions of commercial garden soil in controlled conditions. Low mineral nutrient concentration served as a factor inhibiting plant vegetative growth for both P. arenarium and R. sceleratus plants, albeit with a substrate volume-dependent effect. In contrast, P. coronopus exhibited relatively low root biomass and exhibited minimal susceptibility to alterations in mineral nutrient concentration. Conversely, proportional allocation to roots decreased with increasing mineral nutrient concentration, mirroring the pattern observed for P. arenarium. Notably, for R. sceleratus, this effect was pronounced only at a high substrate volume. Furthermore, allocation to roots decreased with increasing substrate volume, but this occurred only at a high mineral nutrient concentration. The substrate, similar to that in coastal habitats, incorporated quartz sand with varying proportions of mineral-rich organic matter, providing comparable plant-available mineral concentrations for analyzing the effects of nutrient concentration, substrate volume, and genetic variability on plant growth and development. For future experiments, a wider range of mineral concentrations and more individual concentrations should be used to assess mineral availability more realistically.

International Journal of Plant Biology doi: 10.3390/ijpb16040117

Authors: Galina Kolomeitseva Vladimir Koval Andrey Ryabchenko

Following publication, concerns were raised to the editorial office relating to a potential conflict of interest between the authors and the Academic Editor that supervised the peer review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16040116

Authors: Yong Zhang Peng Han Xuefeng Xiao Wei Chen Hang Liu Hengfeng Zhang Lu Xu

Blue fescue (Festuca glauca) is a widely used ornamental grass worldwide. Drought is an important limiting factor for the growth and development of blue fescue; therefore, cultivating new strains of blue fescue with a strong drought tolerance is of great significance for its production practice. To investigate the drought tolerance mechanism of ds-1, this study subjected both ds-1 and “Festina” to a natural drought treatment and measured their physiological and biochemical indicators. A transcriptomic analysis was also conducted to explore the underlying molecular mechanisms. The results showed that, after the drought treatment, the relative water content (RWC), water use efficiency (WUE), and photosynthetic rate (Pn) of ds-1 leaves were significantly higher than those of “Festina”; in addition, the contents of H2O2 and O2−, the relative electrical conductivity (REC), the malondialdehyde (MDA) content, the gas conductance (Gs), and the transpiration rate (Tr) were significantly lower than those of “Festina”. The peroxidase (POD) activity of ds-1 was significantly higher than that of “Festina”, while the superoxide dismutase (SOD) activity of ds-1 was significantly lower than that of “Festina”. The transcriptome data analysis showed that there were a total of 9475 differentially expressed genes (DEGs) between ds-1 and “Festina”. A Venn plot analysis showed 692 DEGs between ds-1—8d vs. “Festina”—8d and ds-1—16d vs. “Festina”—16d. A KEGG enrichment analysis showed that these 692 genes were mainly enriched in 86 pathways, including those related to the photosynthesis antenna protein, plant hormone signal transduction, MAPK signaling, starch and sucrose metabolism, and arginine and proline metabolism. Further screening identified genes that may be associated with drought stress, including PYL, PP2C, SnRK2, ABF, BRI1, JAZ, MYC2, Lhc, and MPK6. The qRT-PCR results indicated that the expression trends of the DEGs were consistent with the transcriptome sequencing results. Our research results can provide a basis for exploring candidate genes for drought tolerance in blue fescue. In addition, our research results provide valuable genetic resources for the development of drought-resistant ornamental grass varieties, which can help reduce water consumption in cities and decrease labor and capital investment.

International Journal of Plant Biology doi: 10.3390/ijpb16040115

Authors: Miriam Elizabeth Martínez-Pérez Dámaris Leopoldina Ojeda-Barrios Rafael Ángel Parra-Quezada Juan Luis Jacobo-Cuéllar Brenda I. Guerrero Esteban Sánchez-Chávez Teresita de Jesús Ruíz-Anchondo

Excess sodium in soil disrupts ionic balance and limits water uptake, negatively affecting growth and stolon production in strawberry plants. This study assessed the effects of chitosan (CTS), brassinosteroids (BRs), and thidiazuron (TDZ) on stolon performance and physiological responses of strawberry cv. ‘Portola’ under saline conditions. A greenhouse experiment included seven treatments: CTS, BRs, CTS + BRs combinations, TDZ, and an untreated control. Foliar applications were used to evaluate impacts on nutrient uptake, photosynthetic pigments, oxidative stress, and stolon production. BRs alone [2.53 × 10−6 μM] significantly increased crown diameter (+43%), stolon number (+65%), stolon length (+4%), and daughter plant formation (+8%), while reducing leaf sodium by 60% and improving Mg2+/Na+ and K+/Na+ ratios. The CTS + BRs combination enhanced phenolic content and produced the heaviest first daughter plants (6.1 g). TDZ, however, resulted in weaker stolons, lower chlorophyll a content, and reduced K+/Na+ ratios, suggesting a need for dose optimization. Overall, BRs, alone or with CTS, improved salt tolerance and stolon propagation through enhanced ion regulation, photosynthesis, and antioxidant defenses. These findings advance understanding of how biostimulants modulate metal ion homeostasis, antioxidant signaling, and growth in salt-sensitive crops, offering strategies to mitigate salinity stress in strawberry cultivation.

International Journal of Plant Biology doi: 10.3390/ijpb16040114

Authors: Aggrey Keya Osogo Shrabana Sarkar Francis Muyekho Hassan Were Patrick Okoth

The common bean (Phaseolus vulgaris L.) is a vital food crop worldwide, particularly in Latin America, Asia, and Sub-Saharan Africa, due to its high levels of protein, fiber, and essential nutrients. However, it is susceptible to viral infections, especially from the Bean common mosaic virus and Bean common mosaic necrosis virus. While previous research has primarily focused on specific resistance genes, a broader understanding of the plant’s overall immune response remains limited. To investigate this, a study was conducted involving 51 infected leaf samples. RNA was extracted, and deep metatranscriptomic sequencing was performed using the Illumina MiSeq platform. The results indicated that several genes related to stress response, nitrogen metabolism, and biosynthesis pathways were activated during infection. Key defense mechanisms included pathogen recognition, the production of antimicrobial peptides, and changes in metabolic activity. The Mitogen-Activated Protein Kinase (MAPK) signaling pathway and enzymes like glycosyl transferases, which aid in building protective structures, played a significant role. These findings suggest that the bean’s defense system is complex and involves not only direct attacks on pathogens but also metabolic shifts and microbial interactions. Understanding these processes provides valuable insights for breeding stronger, disease-resistant, and climate-resilient bean varieties.

International Journal of Plant Biology doi: 10.3390/ijpb16040113

Authors: Keletso Makaota Thabiso Michael Mokotjomela Caswell Munyai Thembelihle Joyce Mbele Nontembeko Dube

Using the biometric differences (i.e., plant physical characteristics) between the C. pallida populations previously treated with herbicide and those of the untreated populations, we tested the prediction that herbicidal treatment suppresses C. pallida plant growth in South Africa, where invasive cacti display high resilience to herbicide treatment. We also determined whether the surrounding communities knew of C. pallida invasion and whether they experienced any negative impacts. Overall, biometric analyses supported the study’s prediction because C. pallida plant height in treated populations was significantly lower than in untreated populations and before treatment. The average plant height of populations not treated with herbicide (i.e., experimental control) and those measured before treatment were not significantly different, but both were significantly greater than the heights of populations previously treated with herbicide. Similarly, the mean number of fruits, cladodes and juveniles per C. pallida plant treated with herbicide was significantly lower than in the untreated populations. We found a significant positive correlation between all measured parameters and C. pallida plant height. Out of 39 participants, 16 (41.0%) confirmed C. pallida presence in and around their properties, with 21 (53.9%) participants having experienced negative impacts directly and indirectly through fatal injuries on pets and livestock in the sampled sites. We confirmed the effectiveness of herbicide in suppressing the invasion of C. pallida and that people experience substantial negative impacts in areas where the species has established.

International Journal of Plant Biology doi: 10.3390/ijpb16040112

Authors: Maltase Mutanda Assefa B. Amelework Nzumbululo Ndou Sandiswa Figlan

Drought stress is a major constraint to cassava productivity, especially in drought-prone regions. Although cassava is considered drought-tolerant, prolonged or severe water scarcity significantly reduces tuber yield, carbon assimilation capacity and overall plant growth. The development, selection and deployment of cassava genotypes with enhanced drought tolerance and water use efficiency (WUE) will help to achieve food security. The ability of cassava genotypes to maintain productivity under drought stress is enhanced by drought-responsive genes that regulate stress-related proteins and metabolites, contributing to stomatal closure, osmotic adjustment, antioxidant defense, and efficient carbon assimilation. Therefore, this comprehensive review aimed to document: (i) the effects of drought stress on cassava’s physiological, biochemical and agronomic traits, and (ii) the mitigation strategies and breeding technologies that can improve cassava yield production, drought tolerance and WUE. The key traits discussed include stomatal regulation, chlorophyll degradation, source–sink imbalance, root system architecture and carbon allocation dynamics. In addition, the review presents advances in genomic, proteomic and metabolomic tools, and emphasizes the role of early bulking genotypes, drought tolerance indices, and multi-trait selection in developing cassava cultivars with enhanced drought tolerance, drought escape and drought avoidance mechanism. Therefore, the integration of these strategies will accelerate the development, selection and deployment of improved cassava varieties, which contribute to sustainable productivity and global food security under climate change.

International Journal of Plant Biology doi: 10.3390/ijpb16030111

Authors: Pheeraphan Thongplew Jakkrapong Kangsopa Sutheera Hermhuk Krittiya Tongkoom Prakash Bhuyar Nednapa Insalud

Dioecious hemp cultivation faces significant productivity challenges, as approximately 50% of plants (males) produce no seeds whatsoever, functioning exclusively as pollen donors, creating substantial resource inefficiency in commercial production. This study evaluated ethephon (2-chloroethylphosphonic acid) concentrations from 250 to 1000 ppm for inducing feminization in male plants of the Thai hemp cultivar RPF3 under controlled greenhouse conditions. Complete morphological sex conversion (100%) was achieved across all tested concentrations, successfully transforming male plants into seed-producing individuals. Male plants exhibited a linear, concentration-dependent increase in seed production (R2 = 0.76–0.91), with the highest concentration (1000 ppm) producing seven-fold more seeds than the lowest effective concentration (250 ppm). Female plants showed optimal yields at intermediate concentrations (500–750 ppm), with a significant decline in yield at 1000 ppm, indicating hormone toxicity. For commercial optimization, concentration selection depends on production objectives. 500 ppm provides optimal cost-effectiveness for mixed dioecious systems, delivering a 2.2-fold increase in total yield, while 1000 ppm maximizes productivity for male-only cultivation systems. Seeds from feminized males remained consistently 62–73% lighter than those from natural females across all treatments, indicating genetic control over seed morphology, despite hormonal sex conversion. This ethephon-based approach preserves the genetic diversity advantages of dioecious systems while doubling land-use efficiency, providing a sustainable intensification strategy for commercial hemp seed production.

International Journal of Plant Biology doi: 10.3390/ijpb16030110

Authors: Valentina Rodriguez-De-Barbieri Pablo González-Barrios Pablo Rovira Claudia Marchesi Robin Cuadro Rodrigo Zarza Tiago Edu Kaspary

The intensification of rice–livestock systems has encouraged the integration of forage species into rice cultivation. However, the use of imidazolinone-tolerant rice cultivars (imazapyr + imazapic, IMIs), essential for weedy rice control, may hinder the establishment of sensitive forages due to herbicide residues. This study evaluated the emergence and early growth of six forage species through bioassays in soils with different IMI use histories. Over three years (2021–2023), soils were collected from three rice-growing regions in Uruguay with contrasting soil properties, at depths of 0–15 and 16–30 cm, under three IMI conditions: Control (no prior use), IMI-1 (applied one season before sampling), and IMI-2 (applied in the season before sampling). Emergence, plant height, and shoot and root biomass were analyzed using linear mixed models and principal component analysis. Shoot biomass was reduced by up to 60% in IMI-2 soils. Poaceae species and T. pratense were the most affected, while T. repens and L. corniculatus exhibited higher tolerance. Multivariate analysis indicated stronger residual effects on sandy loam soils. These findings highlight that imidazolinone persistence varies with forage species and soil properties, underscoring the need for careful planning in rice–pasture rotations to prevent adverse effects on forage establishment and system sustainability.

International Journal of Plant Biology doi: 10.3390/ijpb16030109

Authors: Héctor Stalin Arista-Fernández Angel David Hernández-Amasifuen Alexandra Jherina Pineda-Lázaro Juan Carlos Guerrero-Abad

The conservation of native blueberries (Vaccinium spp.) from Andean and Amazonian ecosystems faces challenges from climate change, habitat fragmentation, and land use. In this context, this review article provides a comprehensive analysis of the most relevant biotechnological and genomic tools applied to the preservation of these plant genetic resources, as well as their characterization. Among the biotechnological strategies, in vitro micropropagation delivers clonal pathogen-free valuable plants, while cryopreservation offers a viable option for a long-term germplasm storage. We also summarize its protocols focus on high regeneration rates and reproducibility. In the genomic field, we show advances in the use of molecular markers (such as SNPs, SSRs, and RAPDs), DNA barcoding and next-generation sequencing that leads genetic diversity assessment and identification of species. Finally, future perspectives in native blueberry conservation are discussed that allow the integration of emerging technologies such as landscape genomics, environmental transcriptomics, and the use of artificial intelligence tools. Integrating these approaches with the active participation of local communities can substantially strengthen the sustainable conservation of native blueberries in their natural habitats.

International Journal of Plant Biology doi: 10.3390/ijpb16030108

Authors: Suzane Sá Matos Ribeiro Sérgio Heitor Sousa Felipe Givago Lopes Alves Priscila Marlys Sá Rivas Juliane Maciel Henschel Lúcio Rafael Rocha de Moraes Luís Carlos Ferreira Reis José Ribamar Gusmão Araújo Marcos Vinícius Marques Pinheiro Diego Silva Batista Thais Roseli Corrêa

Platonia insignis Mart. is a native Amazonian fruit tree with considerable agro-industrial potential, yet it remains underutilized due to limited domestication efforts and the absence of breeding programs or improved genetic lines. This study aimed to estimate genetic parameters based on morpho-agronomic fruit traits and to identify superior genotypes from natural coastal populations in the Brazilian Amazon. Thirteen genotypes were evaluated for 16 biometric and compositional traits. Genetic parameters were estimated using REML/BLUP (Restricted Maximum Likelihood/Best Linear Unbiased Prediction) procedures, and a rank–sum selection index was applied to identify elite individuals. The results revealed substantial phenotypic and genetic variability, with broad-sense heritability values ranging from moderate to high for key traits, including longitudinal fruit diameter (0.81), fruit fresh mass (0.66), and seed fresh mass (0.75). Selection accuracy was high (≥0.96) across most traits, indicating strong experimental reliability. Genotypic correlations highlighted favorable associations among traits related to pulp yield, sugar content, and seed reduction. Six superior genotypes (G7, G1, G6, G3, G2, and G4) exhibited optimal profiles for fruit quality and productivity. These findings provide a strong foundation for breeding strategies and support the genetic conservation and domestication of P. insignis as a native species of high economic and ecological importance.

International Journal of Plant Biology doi: 10.3390/ijpb16030107

Authors: Galina Kolomeitseva Vladimir Koval Andrey Ryabchenko Alexander Babosha

Following publication, concerns were raised to the Editorial Office relating to a potential conflict of interest between the authors and the Academic Editors that supervised the peer-review of this article [...]

International Journal of Plant Biology doi: 10.3390/ijpb16030106

Authors: Stephen M. G. Duff Lei Shi Shirley Guo Erin Hall Steven Voss Oscar Sparks Guillermo A. Asmar-Rovira Clayton T. Larue Marguerite J. Varagona

Glyphosate (N-phosphonomethylglycine) is a broad-spectrum, foliar-applied herbicide that inhibits 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) in plants. EPSPS catalyzes a crucial step in the shikimate pathway for the biosynthesis of folates and aromatic amino acids in plants. A variety of glyphosate-tolerant EPSPS enzymes have been reported. Some of these have been introduced into crops using biotechnology to produce glyphosate-tolerant crops. Glyphosate tolerance in crops permits the use of glyphosate to control weeds while maintaining crop yield. We endeavored to optimize the maize EPSPS enzyme with improvements in both enzymatic activity and reduction in sensitivity to glyphosate to improve the potential for herbicide tolerance in crops. Here, we have improved the glyphosate tolerance of maize EPSPS with the potential of providing an herbicide tolerance trait by utilizing enzyme optimization with in vitro and in planta screening. Overexpressing some of these EPSPS variants into maize have resulted in maize plants with robust vegetative glyphosate tolerance.

International Journal of Plant Biology doi: 10.3390/ijpb16030105

Authors: My Abdelmajid Kassem

Chloroplast genomes are valuable tools for exploring plant evolution, photosynthesis, and molecular systematics due to their relatively conserved structure and gene content. Here, I present a comprehensive comparative analysis of complete chloroplast genomes from 20 taxonomically diverse plant species, focusing on 16 widely used barcoding genes to investigate patterns of genome structure, gene retention, codon usage bias, and phylogenetic relationships. Genome sizes ranged from ~121 kb in Marchantia polymorpha to over 160 kb in Vitis vinifera, with GC content largely conserved across species. A multi-gene Neighbor-Joining phylogenetic framework recovered major taxonomic groupings and revealed gene-specific topological differences, reflecting locus-specific evolutionary histories. Presence/absence profiling showed that 13 of the 16 barcoding genes were consistently retained across species and classified as core genes, while the remaining three exhibited more variable distributions and were considered accessory. This pattern reflects both broad conservation and lineage-specific gene loss across plastomes. Genome-wide similarity analysis revealed high identity among closely related taxa (e.g., Arabidopsis and Brassica) and greater divergence among bryophytes, gymnosperms, and angiosperms. Codon usage analysis revealed generally conserved patterns, with lineage-specific biases observed in Cucumis sativus and Brassica rapa, suggesting influences from mutational pressure and potential translational selection. This integrative analysis highlights the dynamic yet conserved nature of chloroplast genomes and underscores the value of combining multiple genomic features in plastome evolution studies. The resulting dataset and analytical pipeline offer a useful resource for future phylogenomic, evolutionary, and biodiversity research in plant science.

International Journal of Plant Biology doi: 10.3390/ijpb16030104

Authors: Binoop Mohan Chandrima Karthik Chippy Pushpangathan Karolina M. Pajerowska-Mukhtar Vinoy Thomas M Shahid Mukhtar

The application of plasma technology in agriculture has emerged as a promising approach to enhance plant health and manage microbial interactions, offering potential solutions for sustainable crop production and disease control. This study contributes to this field by exploring the effects of plasma treatments on plant physiology and microbial dynamics, with a focus on their potential to improve agricultural outcomes. This investigation aims to systematically determine optimal plasma seed treatment parameters for enhancing plant vigor and promoting beneficial microbial associations while minimizing pathogenic interactions in Arabidopsis thaliana. This study focuses on understanding the effects of various plasma treatments on chlorophyll content, root length, microbial growth, and microbial quantification in plants and microbes. The treatments involve the use of an atmospheric jet plasma handheld device, a globe plasma, and a glow discharge plasma chamber with air and argon. These treatments were applied for varying time durations from 10 s to 5 min. The results demonstrated that the globe plasma treatment for 1 min significantly enhanced chlorophyll a extraction and root length, outperforming the other treatments. Additionally, the study examined the impact of plasma on plant–microbe interactions to assess whether plasma treatments affect beneficial microbes. Plasma treatments showed minimal impact on most beneficial microbe activity, though species-specific sensitivities were observed, with Pseudomonas cedrina showing moderate growth inhibition, revealing no significant disruption to their activity. The microbial quantification assays indicated that the globe plasma treatment effectively reduced microbial counts, while combined treatment with plant and microbe plasma together did not yield significant changes. Additionally, the chlorophyll estimation of plasma-treated samples indicated that the globe plasma and atmospheric jet plasma treatments were effective in enhancing chlorophyll content, whereas the combined treatment with both plant and microbe plasma did not yield significant changes. These findings suggest that plasma treatments, especially the globe plasma, are effective in improving plant health and controlling microbial activity. Future research should focus on optimizing plasma conditions, exploring the influence of plasma parameters and the underlying mechanisms, and expanding the scope to include a wider range of plant species and microbial strains to maximize the benefits of plasma technology in agriculture.

International Journal of Plant Biology doi: 10.3390/ijpb16030102

Authors: Bartholomew Saanu Adeleke Soji Fakoya

Exploring microbial resources from coastal environments is crucial for enhancing food security; however, current knowledge remains limited. This study aimed to isolate and molecularly characterize bacteria associated with maize and groundnut, and to evaluate their potential as plant growth-promoting (PGP) agents. Rhizobacteria were isolated from rhizospheric soil, and endophytic bacteria were obtained from surface-sterilized and macerated plant roots. One gram of each sample was suspended in sterile distilled water in test tubes, serially diluted, and plated on nutrient agar. After incubation, distinct colonies were sub-cultured to obtain pure cultures for biochemical tests, screening for PGP traits, assessment of pH and salt tolerance, optimal growth conditions, bioinoculation potential, and molecular analysis. Out of sixty isolated bacteria, five potent strains, BS1-BS5, were identified. BS3 showed the highest mannanase activity, with a 2.3 cm zone of clearance, while BS2 exhibited high indole-3-acetic acid (IAA) and phosphate solubilization activities of 10.92 µg/mL and 10.78 mg/L. BS1 and BS4 demonstrated high drought tolerance, 0.94 and 0.98 at 10% PEG, with BS1 also showing maximum salt tolerance of 0.76. At 6.0 g and 2.0 g supplementation, BS1 and BS2 utilized 100% lactose and fructose. BS3 exhibited the highest percentage of antifungal activity, with a 30.12% inhibition rate. BS4 and BS5 promoted shoot lengths of 55.00 cm and 49.80 cm, respectively. Although the bacterial species isolated are generally considered pathogenic, their positive effects contributed significantly to maize growth.

International Journal of Plant Biology doi: 10.3390/ijpb16030103

Authors: Nayla Tamara Sánchez-Granados Sergio Rubén Pérez-Ríos Yolanda González-García Fabian Fernández-Luqueño Eliazar Aquino-Torres Mariana Saucedo-García Ana Karen Zaldívar-Ortega Ma Isabel Reyes-Santamaria Iridiam Hernández-Soto

Lilium species produce some of the most commercially valuable ornamental flowers in the world, characterized by their attractiveness and high demand in cut flower markets. However, it is necessary to strengthen the competitiveness of this sector in the global market. Due to strong competition from international producers and an increasingly demanding market regarding quality, shelf life, and sustainability, alternatives are being sought to counteract the use of conventional agrochemicals. The use of nanoparticles has emerged as a promising strategy in ornamental horticulture due to their ability to enhance plant growth, improve stress tolerance, and stimulate physiological processes, ultimately contributing to higher quality and productivity. The hypothesis of this research is that the foliar application of selenium and titanium dioxide nanoparticles during the vegetative growth and flowering stages significantly enhances the growth, development, and flowering of Lilium plants when compared with untreated plants. Therefore, the physiological effects of SeNPs and TiO2NPs applied via foliar application in two concentrations (SeNPsD1, SeNPsD2, TiNPsD1, and TiNPsD2) were evaluated against absolute control. The treatments were applied in two phenological stages (vegetative and reproductive development), and their effects on vegetative and reproductive variables in Lilium plants were evaluated from 120 to 270 days after sowing. The surface of seeds obtained from SeNPsD1-treated plants was further analyzed via scanning electron microscopy (SEM) coupled with energy-dispersive X-ray spectroscopy (EDS). The results demonstrate that the application of SeNPs generated variable effects depending on the phenological stage. In the vegetative stage (46 DAS), SeNPsD2 increased the number of leaves by 118%, while SeNPsD1 increased the fresh weight of leaves by 110%. Regarding ovaries, the application of SeNPsD2 resulted in a 276% increase in fresh weight and a 230% increase in dry weight, while SeNPsD1 achieved an increase of 164% in fresh weight. Furthermore, at this stage, SeNPsD2 promoted a 223% increase in the number of bulbils, a 240% increase in fresh weight, and a 199% increase in dry weight. In the reproductive stage (69 DAS), SeNPsD1 increased the leaf fresh weight by 1% and yielded a 107% increase in the number of ovaries, in addition to 307% and 328% increases in their fresh and dry weights, respectively. In the same stage, SeNPsD2 increased the fresh ovary weight by 153%, compared with the control. Finally, capsule formation was observed only under the SeNPsD1 treatment. Meanwhile, TiO2NPs had an effect on the number of buds and the number of open buds: the number of buds increased by 115% with TiNPsD1 (69 DAS) and the number of open buds increased by 104% (46 DAS) with TiNPsD1; in the reproductive stage, the number increased by 115% with TiNPsD1 compared with the control. In the seed capsules of plants treated with selenium nanoparticles (SeNPsD1), although no surface selenium was detected via EDS, elements that had possibly been physiologically redistributed were identified, including iron (Fe), silicon (Si), and aluminum (Al). These findings confirm the hypothesis of this research, demonstrating that the foliar application of SeNPs and TiO2NPs to Lilium plants during the vegetative and reproductive stages significantly improves their vegetative growth, reproductive development, and floral quality under controlled conditions. This work presents the first comparative evidence regarding the effects of SeNPs and TiO2NPs on the vegetative and reproductive characteristics of Lilium Sunny Oriental, providing unprecedented information for the use of nanotechnology in ornamental horticulture. The findings confirm the potential use of nanoparticles as agents to optimize the productivity and commercial quality of ornamental flowers in highly competitive markets.

International Journal of Plant Biology doi: 10.3390/ijpb16030101

Authors: Pornsawan Sutthinon Piyanuch Orpong Paveena Kaewubon Sureerat Yenchon Orawan Detrueang Sutthinut Soonthornkalump

The lotus (Nelumbo nucifera Gaertn.) is an ornamental aquatic plant, highly valued in Asian cultures for its religious symbolism, culinary uses, and medicinal properties. However, the lotus exhibits low genetic diversity in nature, which limits the genetic resources available for breeding programs. Gamma irradiation is an effective method for inducing genetic variation in lotus breeding. The present study examines the gamma sensitivity of lotus seedlings, along with the morphological and anatomical changes induced by various gamma dosages. The results showed that high-dose gamma irradiation (≥100 Gy) significantly inhibited seedling growth and altered most anatomical parameters, each exhibiting distinct dose–response patterns except for midrib diameter. The 100 Gy treatment resulted in the maximum stem diameter, while root diameter peaked at 500 Gy, and the highest dose (600 Gy) produced the largest petioles. Gamma irradiation also triggered tannin accumulation and reduced aerenchyma formation in the leaves. The obtained results demonstrate organ-specific responses to gamma irradiation in the lotus, with leaves being the most sensitive, while petioles, stems, and roots exhibited more variable dose-dependent effects.

International Journal of Plant Biology doi: 10.3390/ijpb16030100

Authors: Oana Alina Nitu Elena Stefania Ivan Adnan Arshad

Vegetables such as lettuce, tomato, carrot, and beet are vital to the global food industry, providing essential nutrients and supporting sustainable agriculture. Their cultivation in greenhouses across diverse climatic zones (temperate, Mediterranean, tropical, subtropical, and arid) has gained prominence due to controlled environments that enhance yield and quality. However, these crops face significant threats from climate change, including rising temperatures, erratic light availability, and resource constraints, which challenge optimal growth and nutritional content. This study investigates the influence of microclimatic conditions—temperature, light intensity, and CO2 concentration—on the growth, physiology, and biochemistry of these vegetables under varying greenhouse types and climatic zones, addressing these threats through a systematic review. The methodology followed the PRISMA guidelines, synthesizing peer-reviewed articles from 1995 to 2025 sourced from Web of Science, Pub Med, Scopus, Science Direct, Springer Link, and Google Scholar. Search terms included “greenhouse microclimate”, “greenhouse types”, “Climatic Zones, “and crop-specific keywords, with data extracted on microclimatic parameters and analyzed across growth stages and climatic zones. Eligibility criteria ensured focus on quantitative data from greenhouse studies, excluding pre-1995 or non-peer-reviewed sources. The results identified the following optimal conditions: lettuce and beet thrive at 15–22 °C, 200–250 μmol·m−2·s−1, and 600–1100 ppm CO2 in temperate zones; tomatoes at 18–25 °C, 200–300 μmol·m−2·s−1, and 600–1100 ppm in Mediterranean and arid zones; and carrots at 15–20 °C, 150–250 μmol·m−2·s−1, and 600–1000 ppm in subtropical zones. Greenhouse types (e.g., glasshouses, polytunnels) modulate these optima, with high-tech systems enhancing resilience. Conclusively, tailored microclimatic management, integrating AI-driven technologies and advanced greenhouse designs, is recommended to mitigate threats and optimize production across climatic zones.

International Journal of Plant Biology doi: 10.3390/ijpb16030099

Authors: Paraskevi Mpeza Charilaos Yiotis Orestis Gatsios Emmanouil Staratzis Dimitrios Kyrkas Nikolaos Mantzos Vasileios Papantzikos Spiridon Mantzoukas

Papaver rhoeas L. has four strikingly red petals with a distinctly black area bordered by a thin white line at the petal base, thus creating a color pattern that makes the center of the flower, where the pollen is located, visually stand out. This paper aims to assess the intra-petal spatial variability in P. rhoeas petal color intensity and hue and associate it with corresponding differences in the amount and type of petal pigments. The distribution of pigments in the petal epidermis was investigated in different petal segments by column chromatography. Fresh petals were extracted with deionized water during blooming, between April and June 2023, in northwestern Greece. UV–visible absorption spectra of the eluted fractions revealed five pigments, with each pigment belonging to a different elution zone. In the black spots of the petals, anthocyanin coexists with a yellow flavonol with a maximum absorption peak at 340 nm. Red petal extract in 70:30 ethanol–water showed a distinct negative Cotton effect at 284 nm, distinct from black segment extract with a negative Cotton effect at 227 nm. The uneven distribution of floral pigments along the petal epidermis creates a unique color palette, enabling UV-reflection, which is key in attracting pollinators responsible for plant reproduction.

International Journal of Plant Biology doi: 10.3390/ijpb16030098

Authors: Michele Faralli Minuka Weerasinghe Gee-Sian Leung Ray Marriott Melville Miles James M. Monaghan Peter Kettlewell

Stomatal blockers are hydrophobic polymers applied to leaves to physically block stomatal pores and restrict gas exchange, and which have potential as plant growth regulators to retard growth. Three experiments in a heated glasshouse, one sown in autumn and two sown in winter, were conducted with pot-grown rapeseed plants at the four-leaf stage to evaluate retardant potential of two bio-based polymers: di-1-p-menthene (DPM) and extracted cauliflower leaf wax. Both stomatal blockers reduced stomatal conductance and plant dry weight in the autumn-sown experiment, when solar radiation was high during leaf development and stomatal conductance of water-treated plants was relatively high. Wax was more effective than DPM at reducing plant dry weight, despite no difference in stomatal conductance. In the two winter-sown experiments, when solar radiation was lower during leaf development, stomatal conductance in water-treated plants was less than in the autumn-sown experiment. Stomatal conductance was reduced by the blockers in the winter-sown experiments, but plant dry weight was unaffected. It was concluded that stomatal blockers may have potential to act as plant growth regulators to retard growth in rapeseed, but further research is necessary to define the circumstances when a response will occur.

International Journal of Plant Biology doi: 10.3390/ijpb16030097

Authors: Taras Pasternak Douglas Steinmacher

In recent years, plant tissue culture has become a crucial component of the modern bioeconomy. From a commercial perspective, plant micropropagation remains one of its most valuable applications. Plants exhibit remarkable developmental plasticity; however, many species still remain recalcitrant in tissue culture. While the term recalcitrant is commonly used to describe plants with poor in vitro regeneration capacity, from a biological point of view it suggests that the minimal culture requirements for this species were unmet. Despite evidence that the Skoog–Miller exogenous hormonal balance theory and Murashige–Skoog medium were species-limited in applicability, generations of plant biotechnologists applied these tools indiscriminately. This led to systemic propagation of ineffective protocols, publication of misleading standards, and a culture of scientific inertia—costing both time and resources. The field must now move beyond historical dogma toward data-driven, species-specific innovation based on multiple endogenous auxin biosynthesis pathways, epigenetic reprogramming of competent cells, and further modern biotechnologies that are evolving. In this short viewpoint, we describe possible solutions in plant biotechnology to significantly improve the effectiveness of it.

International Journal of Plant Biology doi: 10.3390/ijpb16030096

Authors: José Rigoberto Arroyo-Axol Ana Karen Miranda-Solares José Juan Zúñiga-Aguilar Alma Rosa Solano-Báez Régulo Carlos Llarena-Hernández Luz Irene Rojas-Avelizapa Rosalía Núñez-Pastrana

Phytophthora blight, caused by Phytophthora capsici, is a destructive disease that significantly constrains the production of chayote (Sechium edule) in Mexico, leading to substantial yield and economic losses. The increasing ineffectiveness of synthetic fungicides and associated environmental concerns underscore the need for sustainable control alternatives. This study evaluated the antifungal efficacy of low molecular weight chitosan (75–85% deacetylation; Sigma-Aldrich) against P. capsici under in vitro and in vivo conditions. Chitosan solutions (0.1–3.0 g L−1) were tested for their ability to inhibit pathogen growth and suppress disease symptoms. In vitro assays demonstrated a concentration-dependent inhibition of mycelial growth, with the highest dose (3.0 g L−1) reducing radial expansion by 32.6%. In fruit inoculation experiments, treatment with 1.0 g L−1 chitosan decreased lesion size by 50.9%, while the same concentration reduced disease severity index (DSI) by 50% in whole plants. Notably, symptom suppression was observed in tissues not directly exposed to chitosan, suggesting the activation of systemic resistance. Although the underlying molecular mechanisms were not directly assessed, the results support the dual role of chitosan as a direct antifungal agent and a potential inducer of host defense responses. These findings highlight the potential of chitosan as a biodegradable, low-toxicity alternative to synthetic fungicides and support its integration into sustainable management strategies for Phytophthora blight in chayote production systems.

International Journal of Plant Biology doi: 10.3390/ijpb16030095

Authors: Meng Zhan Daohe Liu Yuxing Peng Yulu Zhou

GRAS transcription factors play a crucial role in plant response to abiotic stresses. In this study, 61 members of the rice GRAS family, categorized into nine subfamilies, were identified by searching the latest genome sequence of rice. The OsGRAS genes that may respond to abiotic stresses were predicted by analyzing the cis-acting elements of the promoters of the genes and the structural features of the proteins. The results showed that the known OsGRAS drought-tolerant genes and OsGRAS salt-tolerant genes have a special structure in their protein structures, and nine genes that may be related to drought tolerance and six genes that may be related to salt tolerance were predicted in this study based on these special structures. The results of tissue expression profiling showed that OsGRAS family genes were expressed in different degrees during plant growth and development, and the expression of DELLA, PAT1, and HAM subfamily members was generally high. Finally, the analysis of the expression levels of 16 randomly selected OsGRAS genes under drought and salt stress conditions showed significant up-regulation of OsGRAS14 and OsGRAS21 under both stress treatments, and OsGRAS52 was significantly down-regulated under drought stress and up-regulated under salt stress. The present study provides important clues for exploring the molecular basis of the mechanism of rice response to abiotic stress, and also provides new ideas for the improvement of rice germplasm resources.

International Journal of Plant Biology doi: 10.3390/ijpb16030094

Authors: Gabriella Impallomeni Antonio Lupini Agostino Sorgonà Antonio Gattuso Francesco Barreca

This study evaluated the qualitative and quantitative performance of lettuce (cv. Romana) grown using different cultivation systems under Mediterranean greenhouse conditions equipped with photoluminescent glass panels. Five systems were compared: outdoor soil (PSO), indoor soil (PSI), aeroponic (A), hydroponic with inorganic nutrients (HSN), and hydroponic with organic nutrients (HSO). Morphological, physiological, and quality parameters were measured alongside solar irradiance and extended PAR. The results showed that aeroponics significantly outperformed other systems in fresh weight (52.7 g), photosynthetic pigments, and carotenoids, while HSO showed the lowest yield and quality. Although PSO had the highest antioxidant activity and phenolic content, it exhibited poor yield due to lower water use efficiency and light-induced stress. The PCA analysis highlighted distinct groupings among systems, with A linked to yield and pigment concentration, and PSO associated with antioxidant traits. Despite a 44.8% reduction in solar radiation inside the greenhouse, soilless systems—especially aeroponics—proved effective for maintaining high productivity and quality. These findings support the integration of soilless systems and photoluminescent technologies as sustainable strategies for high-efficiency lettuce production in controlled environments.

International Journal of Plant Biology doi: 10.3390/ijpb16030093

Authors: Sukhmanjot Kaur Milena Maria Tomaz de Oliveira Amita Kaundal

Soil salinity stress, intensified by extreme weather patterns, significantly threatens global watermelon [Citrullus lanatus (Thunb.) Matsum & Nakai] production. Watermelon, a moderately salt-sensitive crop, exhibits reduced germination, stunted growth, and impaired fruit yield and quality under saline conditions. As freshwater resources decline and agriculture’s dependency on irrigation leads to soil salinization, we need sustainable mitigation strategies for food security. Recent advances highlight the potential of using salt-tolerant rootstocks and breeding salt-resistant watermelon varieties as long-term genetic solutions for salinity. Conversely, agronomic interventions such as drip irrigation and soil amendments provide practical, short-term strategies to mitigate the impact of salt stress. Biostimulants represent another tool that imparts salinity tolerance in watermelon. Plant growth-promoting microbes (PGPMs) have emerged as promising biological tools to enhance watermelon tolerance to salt stress. PGPMs are an emerging tool for mitigating salinity stress; however, their potential in watermelon has not been fully explored. Nanobiochar and nanoparticles are another unexplored tool for addressing salinity stress. This review highlights the intricate relationship between soil salinity and watermelon production in a unique manner. It explores the various mitigation strategies, emphasizing the potential of PGPM as eco-friendly bio-inoculants for sustainable watermelon management in salt-affected soils.

International Journal of Plant Biology doi: 10.3390/ijpb16030092

Authors: Marianela Simonutti Gonzalo Berhongaray Marcos Derita Juan Marcelo Zabala

Cannabis sativa L. is a high-value medicinal crop whose nutritional requirements and fertilization strategies remain poorly defined, particularly in relation to cannabinoid production. This study evaluated the effects of inorganic fertilization (N, P, and K) on biomass accumulation, nutrient uptake and balance, and cannabinoid content in Cannabis sativa L. A high-cannabidiol (CBD) cultivar was propagated from ex vitro cuttings and grown in 10 L pots with commercial substrate. Treatments included a non-fertilized control and increasing doses of N (0–10 g plant−1), P (0–6 g plant−1), and K (0–10 g plant−1), with higher P and K doses applied during the reproductive stage. Biomass production peaked at 5 g N, 2 g P, and 3 g K plant−1, yielding 41.9% more than the control. Fertilized plants showed harvest indexes of 31–42%. Additional P and K during the reproductive stage did not enhance inflorescence biomass and CBD content. Tissue nutrient concentrations increased with fertilization. Inflorescences had maximum N and P levels at 5 g N and 2 g P plant−1, while leaves accumulated more K at 7.5 g K plant−1. CBD content increased and THC (%) decreased progressively with nutrient supply. High nutrient doses, however, led to nutritional imbalances and plant health issues. Nutrient balance analysis showed differential macronutrient extraction by treatment. These findings highlight the importance of optimized fertilization strategies to enhance both biomass and cannabinoid production in high-CBD cannabis cultivars.

International Journal of Plant Biology doi: 10.3390/ijpb16030091

Authors: Kerington Bass Lorin Harvey Apphia Santy Guihong Bi Kelsey Harvey

Sweetpotato (Ipomoea batatas) is an important global food crop, yet propagation through greenhouse-produced slips is limited by low transplant establishment rates. Previous studies have focused on external morphological traits to improve transplant quality, but the internal anatomical structure of sweetpotato slips remains largely unexplored. This study examined the effects of four plant growth regulators (PGRs)—flurprimidol, paclobutrazol, uniconazole, and indole-3-butyric acid (IBA)—applied foliarly at varying rates to sweetpotato slips grown in a greenhouse. Cross-sections of the stem were stained with toluidine blue O and analyzed microscopically to assess epidermal, collenchyma, parenchyma, and xylem tissue thickness. Flurprimidol at 120 mg·L−1 significantly increased epidermal thickness by 31.8% compared to the control. Paclobutrazol at 30 and 60 mg·L−1 significantly reduced collenchyma thickness by 37.8% and 39.7%, respectively. Other treatments showed no statistically significant differences across measured tissues, although some trends were observed. These findings suggest that certain PGRs may influence internal slip anatomy, particularly the epidermis, which could improve transplant resilience and field performance. Further research is needed to optimize application rates and evaluate long-term agronomic outcomes of anatomical modifications in sweetpotato slips.

International Journal of Plant Biology doi: 10.3390/ijpb16030090

Authors: Claudia F. Ortega Morales Kenji Irie Makoto Kawase

Chili peppers, a staple spice in global cuisine, hold substantial economic value due to their diverse pungency levels and distinctive aromatic profiles. In addition to their sensory attributes, Capsicum fruits exhibit notable morphological diversity and potential health benefits. While contemporary Capsicum breeding efforts have focused on the yield, shelf life, and resistance to biotic and abiotic stresses, comparatively less emphasis has been placed on the fruit quality and flavor traits increasingly valued by consumers seeking novel flavors and functional foods. We evaluated seven underutilized Capsicum landraces collected from Peru, Myanmar, and Japan and conducted an integrative analysis of their morphological traits, nutritional composition, pungency, and volatile compounds. Our findings highlight C. chinense from Myanmar and Peru as a particularly diverse species, encompassing accessions with mild to very highly pungent, elevated antioxidant content, and significant contributions to fruity aromatic notes. These findings support the development of flavor-driven chili-pepper-based food products with enhanced nutritional value and tailored pungency. Our identification of beneficial alleles also offers opportunities for interspecific breeding to produce novel cultivars aligned with evolving consumer preferences, thereby supporting the commercialization of traditional varieties, conserving genetic resources, and expanding the market potential of new cultivars.

International Journal of Plant Biology doi: 10.3390/ijpb16030089

Authors: Rong Di Sreshta Ravikumar Ryan Daddio Stacy Bonos

Cool-season creeping bentgrass (Agrostis stolonifera L., As) is extensively used on golf courses worldwide and is negatively affected by several fungal diseases and abiotic stresses including drought and salinity. CRISPR/Cas9 (clustered regularly interspaced short palindromic repeats/CRISPR-associated) gene editing technology was employed in this project to knock out the AsDREBL (dehydration responsive element binding-like factor) gene, a potential negative regulator in stress tolerance. With our established single guide RNA (sgRNA)-based CRISPR-editing vector and optimized creeping bentgrass tissue culture system using mature seed-derived embryogenic calli of cv. Crenshaw as explant, more than 20 transgenic plants were produced by gene gun bombardment. Fifteen confirmed AsDREBL mutant plants were tested for drought and salinity tolerance by withholding water and applying salt spray in greenhouse settings. Some of the mutants were shown to be more tolerant of drought and salinity stress compared to the non-edited, wild type Crenshaw plants. Our results demonstrate that CRISPR-gene editing technology can be successfully applied to improve the agronomical traits of turfgrass.

International Journal of Plant Biology doi: 10.3390/ijpb16030088

Authors: Thabiso Motseo Lufuno Ethel Nemadodzi

In the coming decades, the agricultural system will predictably rely on organic material to produce crops and maintain food security. Currently, the use of inorganic fertilizers to grow crops and vegetables, such as Swiss chard, spinach, and lettuce, is on the rise and has been proven to be detrimental to the soil in the long run. Hence, there is a growing need to use organic waste material, such as spent coffee grounds (SCGs), to grow crops. Spent coffee grounds are made of depleted coffee beans that contain important soluble compounds. This study aimed to determine the influence of different levels (0.32 g, 0.63 g, 0.92 g, and 1.20 g) of spent coffee grounds on the metabolomic profile of Swiss chard. The 1H-nuclear magnetic resonance (NMR) results showed that Swiss chard grown with different levels of SCGs contains a total of 10 metabolites, which included growth-promoting metabolites (trehalose; betaine), defense mechanism metabolites (alanine; cartinine), energy-reserve metabolites (sucrose; 1,6 Anhydro-β-D-glucose), root metabolites (thymine), stress-related metabolites (2-deoxyadenosine), caffeine metabolites (1,3 Dimethylurate), and body-odor metabolites (trimethylamine). Interestingly, caprate, with the abovementioned metabolites, was detected in Swiss chard grown without the application of SCGs. The findings of the current study suggest that SCGs are an ideal organic material for growing Swiss chard for its healthy metabolites.

International Journal of Plant Biology doi: 10.3390/ijpb16030087

Authors: Jorge-Luis Ramírez-López Mario Añazco Hugo Vallejos Carlos Arcos Kelly Estrada

Identifying optimal seed sources is critical for the propagation and restoration of Juglans neotropica Diels in the northern Ecuadorian Andes, where populations are declining due to habitat loss and overexploitation. This study evaluated the seed quality and germination performance of Juglans neotropica from three ecologically distinct provenances: a natural regeneration site (Cuyuja), a pure plantation (Natabuela), and an agroforestry system (Pimampiro). Five phenotypically superior trees were selected from each site, and germination was assessed under controlled nursery conditions over a 150-day period using a completely randomized design. Initial viability tests confirmed the physiological integrity of the seeds across all provenances. Germination onset ranged from day 55 to day 73, with significant differences in germination percentage, speed, and uniformity. The agroforestry provenance showed the highest germination rate (69%) and superior performance in all physiological indices, while natural regeneration had the lowest (15%). Post-trial viability assessments indicated that a substantial proportion of non-germinated seeds from Cuyuja remained dormant or deteriorated. These findings underscore the role of agroforestry systems in enhancing seed physiological quality and support their prioritization for large-scale propagation and ecological restoration initiatives involving Juglans neotropica.

International Journal of Plant Biology doi: 10.3390/ijpb16030086

Authors: Rabaa Hidri Farah Bounaouara Walid Zorrig Ahmed Debez Chedly Abdelly Ouissal Metoui-Ben Mahmoud

Salinization hinders the restoration of vegetation in salt-affected soils by negatively impacting plant growth and development. Halophytes play a key role in the restoration of saline and degraded lands due to unique features explaining their growth aptitude in such extreme ecosystems. Suaeda fruticosa is an euhalophyte well known for its medicinal properties and its potential for saline soil phytoremediation. However, excessive salt accumulation in soil limits the development of this species. Research findings increasingly advocate the use of extremophile rhizosphere bacteria as an effective approach to reclaim salinized soils, in conjunction with their salt-alleviating effect on plants. Here, a pot experiment was conducted to assess the role of a halotolerant plant growth-promoting actinobacterium, Glutamicibacter sp., on the growth, nutritional status, and shoot content of proline, total soluble carbohydrates, and phenolic compounds in the halophyte S. fruticosa grown for 60 d under high salinity (600 mM NaCl). Results showed that inoculation with Glutamicibacter sp. significantly promoted the growth of inoculated plants under stress conditions. More specifically, bacterial inoculation increased the shoot concentration of proline, total polyphenols, potassium (K+), nitrogen (N), and K+/Na+ ratio in shoots, while significantly decreasing Na+ concentrations. These mechanisms partly explain S. fruticosa tolerance to high saline concentrations. Our findings provide some mechanistic elements at the ecophysiological level, enabling a better understanding of the crucial role of plant growth-promoting rhizobacteria (PGPRs) in enhancing halophyte growth and highlight their potential for utilization in restoring vegetation in salt-affected soils.

International Journal of Plant Biology doi: 10.3390/ijpb16030085

Authors: Carlos Belezaca-Pinargote Bélgica Intriago-Pinargote Brithany Belezaca-Pinargote Edison Solano-Apuntes Ricardo Arturo Varela-Pardo Paola Díaz-Navarrete

A newly emerging disease affecting Schizolobium parahyba (commonly known as pachaco), termed “decline and dieback,” has been reported in association with the fungal pathogens Fusarium sp. and Botryodiplodia sp. This study assessed the antagonistic potential of two Trichoderma sp. isolates (CEP-01 and CEP-02) against these phytopathogens under controlled laboratory conditions. The effects of three temperature regimes (5 ± 2 °C, 24 ± 2 °C, and 30 ± 2 °C) on the growth and inhibitory activity of two Trichoderma spp. isolates were evaluated using a completely randomized design. The first experiment included six treatments with five replicates, while the second comprised twelve treatments, also with five replicates. All assays were conducted on PDA medium. No fungal growth was observed at 5 ± 2 °C. However, at 24 ± 2 °C and 30 ± 2 °C, both isolates reached maximum growth within 72 h. At 24 ± 2 °C, both Trichoderma spp. isolates exhibited inhibitory activity against Fusarium sp. FE07 and FE08, with radial growth inhibition percentages (RGIP) ranging from 37.6% to 44.4% and 52,8% to 54.6%, respectively. When combined, the isolates achieved up to 60% inhibition against Fusarium sp., while Botryodiplodia sp. was inhibited by 40%. At 30 ± 2 °C, the antagonistic activity of Trichoderma sp. CEP-01 declined (25.6–32.4% RGIP), whereas Trichoderma sp. CEP-02 showed increased inhibition (60.3%–67.2%). The combination of isolates exhibited the highest inhibitory effect against Fusarium sp. FE07 and FE08 (68.4%–69.3%). Nonetheless, the inhibitory effect on Botryodiplodia sp. BIOT was reduced under elevated temperatures across all treatments. These findings reinforce the potential of Trichoderma spp. isolates as a viable and eco-friendly alternative for the biological control of pathogens affecting S. parahyba, contributing to more sustainable disease management practices. The observed inhibitory capacity of Trichoderma sp., especially under optimal temperature conditions, highlights its potential for application in integrated disease management programs, contributing to forest health and reducing reliance on chemical products.

International Journal of Plant Biology doi: 10.3390/ijpb16030084

Authors: Karol Rubio Santos Leiva Manuel Oliva Jorge Diaz-Valderrama Juan Guerrero-Abad

Cacao genotypes propagation through plant tissue culture represents a strategic approach for establishing a core collection of elite plants to be used as a donor material source, necessary for increasing new planting areas of cacao. This study aimed to evaluate somatic embryo regeneration in ten native fine-aroma cacao genotypes (INDES-06, INDES-11, INDES-14, INDES-32, INDES-52, INDES-53, INDES-63, INDES-64, INDES-66, INDES-70) from the INDES-CES germplasm collection, under in vitro conditions using culture medium supplemented with different concentrations of Thidiazuron (0, 10, and 20 nM). Our results showed an average of 20 and 100% of callogenesis in all genotypes evaluated, but the callus development did not appear after early stages of its induction; however, primary somatic embryos were observed after 42 days after TDZ treatment in the INDES-52, INDES-53, INDES-64, INDES-66, INDES-70 genotypes. The INDES-52 genotype was more responsive to under 20 nM of TDZ, generating an average of 17 embryos per explant. This study contributes to the adaptation and establishment of a protocol for somatic embryo regeneration of fine-flavor cacao genotypes.

International Journal of Plant Biology doi: 10.3390/ijpb16030083

Authors: Lidiane Miranda da Silva Virginia Silva Carvalho Alexandre Pio Viana Daniel Pereira Miranda Kíssila Motta Defanti Otalício Damásio da Costa Júnior

Grapevine breeding programs face difficulties in preserving germplasm, especially from species and interspecific hybrids, since most collections are maintained in the field and exposed to biotic and abiotic stress, which can lead to material loss. The Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF) Grapevine Breeding Program faces similar challenges, limiting studies on hybrids resistant to the nematode Pratylenchus brachyurus and downy mildew (Plasmopara viticola), which are valuable for genetic improvement. This study aimed to implement in vitro conservation under minimal growth conditions for interspecific hybrids of Vitis spp. from the UENF program. The protocol followed a completely randomized design in a 2 × 2 × 3 factorial scheme: two hybrids (CH1.2 and CH1.3), two temperatures (18 ± 1 °C and 27 ± 2 °C), and three sucrose concentrations (10, 20, and 30 g L−1), over 180 days of in vitro culture. The results showed that conservation of the UENF hybrids is feasible using nodal segments as explants, at 18 ± 2 °C and 10 g L−1 of sucrose, for up to four months. This protocol may also be applied to other Vitis spp., contributing to the preservation and continued study of valuable germplasm.