General summary |
|
Mean read length |
7,281.7 |
Mean read quality |
10.1 |
Median read length |
6,849.0 |
Median read quality |
11.0 |
Number of reads |
147,299,829.0 |
Read length N50 |
8,774.0 |
STDEV read length |
3,943.0 |
Total bases |
1,072,596,978,744.0 |
Number, percentage and megabases of reads above quality cutoffs |
|
>Q5 |
147298188 (100.0%) 1072583.9Mb |
>Q7 |
147099803 (99.9%) 1070908.7Mb |
>Q10 |
100744081 (68.4%) 722355.2Mb |
>Q12 |
45684254 (31.0%) 307676.8Mb |
>Q15 |
7220993 (4.9%) 42072.6Mb |
Top 5 highest mean basecall quality scores and their read lengths |
|
1 |
23.5 (2084) |
2 |
22.5 (5989) |
3 |
22.4 (5198) |
4 |
22.4 (2413) |
5 |
22.1 (4986) |
Top 5 longest reads and their mean basecall quality score |
|
1 |
630912 (7.7) |
2 |
440030 (7.7) |
3 |
393688 (8.0) |
4 |
303639 (7.9) |
5 |
267901 (9.1) |