Basic Statistics
Measure | Value |
---|---|
Filename | CerB79_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18598712 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGGCAT | 5435 | 0.0 | 22.568335 | 1 |
TCCGCTC | 5405 | 0.0 | 18.36476 | 7 |
CGCGGGG | 545 | 1.1823431E-10 | 18.213125 | 1 |
AATCCGC | 5715 | 0.0 | 17.864843 | 5 |
CCGCTCT | 6340 | 0.0 | 14.761503 | 8 |
CGCTCTC | 6685 | 0.0 | 14.4239235 | 9 |
GCCCGGG | 2385 | 0.0 | 14.2694025 | 5 |
CGGGGAT | 4635 | 0.0 | 12.849389 | 1 |
CGGGGGG | 1715 | 0.0 | 12.815942 | 1 |
ATCCGCT | 9035 | 0.0 | 12.712759 | 6 |
AGATCGG | 10980 | 0.0 | 12.634328 | 140-144 |
CAATCCG | 8010 | 0.0 | 12.480718 | 4 |
CCCGGGC | 2650 | 0.0 | 12.30736 | 6 |
CGCGCAC | 825 | 4.0938176E-8 | 12.031701 | 1 |
CCCGCAT | 2785 | 0.0 | 11.456191 | 1 |
CCGGGAT | 5710 | 0.0 | 11.175303 | 1 |
CGCGTAT | 1275 | 1.2732926E-11 | 11.12174 | 1 |
CGGGCTT | 3990 | 0.0 | 11.017213 | 1 |
CGCGAAT | 2670 | 0.0 | 10.887434 | 1 |
CCCGCCT | 2810 | 0.0 | 10.849634 | 1 |