Basic Statistics
Measure | Value |
---|---|
Filename | CerD11_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25168657 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 450 | 7.2759576E-12 | 22.09572 | 1 |
CGCCTCT | 6220 | 0.0 | 19.18278 | 1 |
CTCGAAC | 12510 | 0.0 | 14.703986 | 1 |
AGTCGCT | 9875 | 0.0 | 14.384194 | 6 |
CGCGTAT | 1210 | 0.0 | 14.087001 | 1 |
CGCCCCT | 2950 | 0.0 | 13.963639 | 1 |
CCCGCAT | 4255 | 0.0 | 13.853872 | 1 |
CGCGCAT | 1120 | 0.0 | 13.316618 | 1 |
GGTTAAC | 13190 | 0.0 | 12.922874 | 1 |
GTCGCTT | 11270 | 0.0 | 12.855794 | 7 |
CGCGCCC | 910 | 9.313226E-10 | 12.487377 | 1 |
AATCCGC | 5480 | 0.0 | 12.052997 | 5 |
CGAACAT | 13895 | 0.0 | 11.756064 | 3 |
TCGAACA | 14685 | 0.0 | 11.413813 | 2 |
CCCGGCT | 2345 | 0.0 | 11.206023 | 1 |
CCGCATG | 5040 | 0.0 | 11.132411 | 2 |
TCGGCTT | 14430 | 0.0 | 11.07411 | 2 |
AGATCGG | 10360 | 0.0 | 10.82731 | 140-144 |
CGGGTAT | 3225 | 0.0 | 10.790935 | 1 |
CGCATGC | 4930 | 0.0 | 10.660497 | 3 |