Basic Statistics
Measure | Value |
---|---|
Filename | CerA58_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22885141 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGCTA | 7110 | 0.0 | 17.169172 | 9 |
CGCGGGG | 610 | 1.0124495E-8 | 15.125765 | 1 |
TCTCGCT | 10285 | 0.0 | 12.145039 | 8 |
CGGGCAT | 6385 | 0.0 | 11.893967 | 1 |
AGATCGG | 16780 | 0.0 | 11.630449 | 140-144 |
CCCGCCT | 3750 | 0.0 | 11.355959 | 1 |
TCGCTAG | 5180 | 0.0 | 11.235041 | 9 |
CGCGAGT | 1650 | 0.0 | 11.183899 | 1 |
GCCCGAT | 4075 | 0.0 | 10.972782 | 1 |
CGCGTCC | 1300 | 1.8189894E-11 | 10.91919 | 1 |
GGAAAAT | 54805 | 0.0 | 10.839497 | 1 |
TTCTCGC | 12310 | 0.0 | 10.608735 | 7 |
CGGGGAT | 5925 | 0.0 | 10.182032 | 1 |
CGGGAAT | 12790 | 0.0 | 9.988627 | 1 |
CGCGGTT | 2655 | 0.0 | 9.891019 | 1 |
CCCGTAT | 4040 | 0.0 | 9.838083 | 1 |
CGCGTTT | 2115 | 0.0 | 9.731762 | 1 |
CCCGTCT | 4745 | 0.0 | 9.722568 | 1 |
CGCCCTT | 5780 | 0.0 | 9.7007 | 1 |
CGGGCCA | 2505 | 0.0 | 9.633299 | 1 |