Basic Statistics
Measure | Value |
---|---|
Filename | CerC17_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20411892 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 545 | 5.456968E-12 | 19.558983 | 1 |
CTCGAAC | 11305 | 0.0 | 17.91537 | 1 |
CCCGGCT | 2005 | 0.0 | 14.886289 | 1 |
CGAACAT | 10785 | 0.0 | 14.496196 | 3 |
CGGGGGG | 1540 | 0.0 | 14.305153 | 1 |
CCCGGTT | 9525 | 0.0 | 14.250165 | 1 |
CGCCTCT | 5595 | 0.0 | 13.844521 | 1 |
CGCGGTT | 2110 | 0.0 | 13.808703 | 1 |
CGCGCAT | 1170 | 0.0 | 13.362518 | 1 |
GGTTAAC | 12995 | 0.0 | 13.015241 | 1 |
CGGGCTT | 3875 | 0.0 | 12.654031 | 1 |
CGGGTAT | 3135 | 0.0 | 12.240741 | 1 |
CGCGTGT | 945 | 1.6716513E-9 | 12.032052 | 1 |
CGGGGCG | 905 | 1.1330485E-8 | 11.778614 | 1 |
TCGAACA | 12560 | 0.0 | 11.768611 | 2 |
CGGGGGT | 1520 | 0.0 | 11.688208 | 1 |
AGATCGG | 10925 | 0.0 | 11.670326 | 140-144 |
CGGGGAT | 4525 | 0.0 | 11.307469 | 1 |
CGCGTAT | 945 | 2.1471351E-8 | 11.280048 | 1 |
CCCGGAT | 4790 | 0.0 | 11.275338 | 1 |