Basic Statistics
Measure | Value |
---|---|
Filename | CerD33_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22236452 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 525 | 3.6379788E-12 | 20.277489 | 1 |
CCCGCAT | 3990 | 0.0 | 16.720036 | 1 |
CGCCTCT | 6080 | 0.0 | 13.073644 | 1 |
CGCGCAT | 1115 | 1.8189894E-12 | 12.730262 | 1 |
CGGGCAT | 8065 | 0.0 | 12.495862 | 1 |
CTCGAAC | 12755 | 0.0 | 12.074286 | 1 |
CGCCCAT | 6160 | 0.0 | 11.751727 | 1 |
AATCCGC | 5895 | 0.0 | 11.557652 | 5 |
CGGGGAT | 5060 | 0.0 | 11.361004 | 1 |
AGATCGG | 10265 | 0.0 | 11.233273 | 140-144 |
CGGGAAT | 9730 | 0.0 | 11.014031 | 1 |
CGCGCAC | 720 | 1.5977628E-5 | 10.842824 | 1 |
CGCATGC | 4650 | 0.0 | 10.836465 | 3 |
CGGGCGT | 1185 | 4.6929927E-10 | 10.780437 | 1 |
CGCGTTT | 1975 | 0.0 | 10.7804365 | 1 |
CGCCCCT | 2900 | 0.0 | 10.768045 | 1 |
CCGCATG | 4690 | 0.0 | 10.744043 | 2 |
CGAACAT | 12700 | 0.0 | 10.673624 | 3 |
CGCACAT | 3880 | 0.0 | 10.426183 | 1 |
CGCCCTT | 7880 | 0.0 | 10.177343 | 1 |