Basic Statistics
Measure | Value |
---|---|
Filename | CerC25_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19935070 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGAAC | 10205 | 0.0 | 23.879063 | 1 |
CGCCTCT | 5025 | 0.0 | 22.649385 | 1 |
CGCGGGG | 515 | 0.0 | 21.6929 | 1 |
CGAACAT | 10370 | 0.0 | 21.069801 | 3 |
CGGGGGG | 1375 | 0.0 | 19.804632 | 1 |
CGCGTAT | 845 | 0.0 | 19.005356 | 1 |
CGCGCAT | 1080 | 0.0 | 18.749044 | 1 |
TCGAACA | 11840 | 0.0 | 18.576492 | 2 |
CGCGGTT | 1700 | 0.0 | 18.48283 | 1 |
CGCGCCC | 680 | 0.0 | 18.48283 | 1 |
CGCGCAG | 710 | 2.3646862E-11 | 15.734991 | 1 |
CGGGGAT | 4020 | 0.0 | 15.632245 | 1 |
CGGGCTT | 3400 | 0.0 | 15.402358 | 1 |
CGCGCCT | 965 | 0.0 | 15.194866 | 1 |
CCCATAC | 13390 | 0.0 | 15.066529 | 8 |
CGCCCAT | 3770 | 0.0 | 14.81677 | 1 |
GGCGCCC | 2650 | 0.0 | 14.491778 | 2 |
GATACGA | 11520 | 0.0 | 14.421832 | 7 |
CGGGGGT | 1325 | 0.0 | 14.2282915 | 1 |
CCGGGTT | 3525 | 0.0 | 14.063846 | 1 |