Basic Statistics
Measure | Value |
---|---|
Filename | CerB81_forward_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21618075 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 575 | 0.0 | 19.75013 | 1 |
CGGGCAT | 5580 | 0.0 | 16.917465 | 1 |
CGCGTAT | 1375 | 0.0 | 14.453506 | 1 |
CCCGCAT | 2860 | 0.0 | 12.904916 | 1 |
CGCCCTT | 5485 | 0.0 | 12.681402 | 1 |
CGGGGAT | 5245 | 0.0 | 12.179091 | 1 |
AATCCGC | 6305 | 0.0 | 12.157843 | 5 |
CGGGCCC | 1015 | 4.1472958E-10 | 11.887779 | 1 |
TCCGCTC | 5670 | 0.0 | 11.766915 | 7 |
CGGGAAT | 9715 | 0.0 | 11.762535 | 1 |
CCCGTAT | 3445 | 0.0 | 10.919544 | 1 |
AGATCGG | 11545 | 0.0 | 10.732051 | 140-144 |
CGGGCAC | 3025 | 0.0 | 10.558567 | 1 |
CGCCCAT | 5675 | 0.0 | 10.505852 | 1 |
CGCCCGT | 1190 | 5.7480065E-9 | 10.139577 | 1 |
CGGGCCT | 2865 | 0.0 | 9.909534 | 1 |
CGCGTTT | 2295 | 0.0 | 9.89658 | 1 |
CGCACAT | 3470 | 0.0 | 9.818149 | 1 |
CCGCTCT | 6760 | 0.0 | 9.44943 | 8 |
CGCCCCT | 3185 | 0.0 | 9.359609 | 1 |