Basic Statistics
Measure | Value |
---|---|
Filename | CerD33_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22236452 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 525 | 0.0 | 35.92725 | 1 |
CCCGCAT | 3790 | 0.0 | 17.879362 | 1 |
CGGGCCC | 1025 | 0.0 | 14.994027 | 1 |
CGCCTCT | 6805 | 0.0 | 13.961441 | 1 |
CGGGGAT | 5615 | 0.0 | 13.6855545 | 1 |
CGCGTTT | 1950 | 0.0 | 13.613459 | 1 |
CGGGCAT | 7990 | 0.0 | 13.464599 | 1 |
CTCGAAC | 12950 | 0.0 | 13.21648 | 1 |
CGCGTAT | 1080 | 9.094947E-12 | 12.2899275 | 1 |
CGGGGGG | 1710 | 0.0 | 12.255883 | 1 |
CGCCCCT | 3200 | 0.0 | 12.2252445 | 1 |
AGATCGG | 10125 | 0.0 | 11.964291 | 140-144 |
CGCGCAT | 1115 | 1.6370905E-11 | 11.904145 | 1 |
CCGCATG | 4195 | 0.0 | 11.823494 | 2 |
AATCCGC | 5940 | 0.0 | 11.640393 | 5 |
CGCATGC | 4240 | 0.0 | 11.530578 | 3 |
CGCGTGT | 1045 | 8.749339E-10 | 11.364546 | 1 |
CGGGGCT | 3565 | 0.0 | 11.169527 | 1 |
CGCCCTT | 7200 | 0.0 | 10.96391 | 1 |
CGCCCAT | 6075 | 0.0 | 10.924381 | 1 |