Basic Statistics
Measure | Value |
---|---|
Filename | CerB72_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19008814 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 555 | 0.0 | 20.074203 | 1 |
CGGGCAT | 4935 | 0.0 | 15.661997 | 1 |
CCCGGCT | 2460 | 0.0 | 14.719042 | 1 |
TCCGCTC | 4770 | 0.0 | 14.011596 | 7 |
CGCGTAT | 1125 | 0.0 | 13.617001 | 1 |
AATCCGC | 5300 | 0.0 | 13.135769 | 5 |
CGCGTTT | 1960 | 0.0 | 12.434356 | 1 |
AGATCGG | 9380 | 0.0 | 12.060377 | 140-144 |
CGCGCAC | 930 | 1.7898856E-9 | 11.979767 | 1 |
CGCGCAT | 1230 | 9.094947E-12 | 11.32234 | 1 |
CGCCCTT | 4945 | 0.0 | 11.265099 | 1 |
CGGGAAT | 8280 | 0.0 | 10.932623 | 1 |
CGCTCTC | 6140 | 0.0 | 10.885231 | 9 |
CCGCTCT | 6075 | 0.0 | 10.657895 | 8 |
ATCCGCT | 7525 | 0.0 | 10.362064 | 6 |
GCCCGAT | 3970 | 0.0 | 10.348391 | 1 |
CCCGCAT | 2780 | 0.0 | 10.269526 | 1 |
CGCCCAT | 4890 | 0.0 | 10.252623 | 1 |
CAATCCG | 8030 | 0.0 | 9.883725 | 4 |
CGCACAC | 2690 | 0.0 | 9.836546 | 1 |