Basic Statistics
Measure | Value |
---|---|
Filename | CerD22_reverse_paired.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23684235 |
Sequences flagged as poor quality | 0 |
Sequence length | 50-150 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGGGG | 605 | 0.0 | 26.514502 | 1 |
CCCGCAT | 4050 | 0.0 | 14.121143 | 1 |
AGATCGG | 11765 | 0.0 | 12.963203 | 140-144 |
CGCGTTT | 1700 | 0.0 | 12.718145 | 1 |
CGCCTCT | 6495 | 0.0 | 12.5637045 | 1 |
CGCGTGT | 1115 | 1.8189894E-12 | 12.510255 | 1 |
CGGGGAT | 5550 | 0.0 | 12.189609 | 1 |
CGGGCCC | 1120 | 1.8189894E-11 | 11.831685 | 1 |
CCCGTCT | 4610 | 0.0 | 11.800616 | 1 |
CGCGTAT | 1200 | 5.456968E-12 | 11.624111 | 1 |
CGGGCAT | 8390 | 0.0 | 11.47171 | 1 |
CGGGGGG | 1775 | 0.0 | 11.394903 | 1 |
GCCGGGT | 2475 | 0.0 | 11.271866 | 1 |
CGGGACT | 4455 | 0.0 | 11.271866 | 1 |
CGCCCTT | 8020 | 0.0 | 11.218282 | 1 |
CGGGGCG | 1010 | 6.373739E-9 | 11.04866 | 1 |
CGCGCAT | 1095 | 1.9481377E-9 | 10.82794 | 1 |
CGCCCCT | 3360 | 0.0 | 10.7938175 | 1 |
CGGGAAT | 10865 | 0.0 | 10.7842655 | 1 |
CGGGCGT | 1110 | 2.4392648E-9 | 10.681616 | 1 |