Abstract
As the world is approaching the eradication of wild poliovirus serotype 1, the last of the three wild types, the question of how to maintain a polio-free world becomes imminent. To mitigate the risk of sporadic vaccine-associated paralytic polio (VAPP) caused by oral polio vaccines (OPVs) that are routinely used in global immunization programs, the Polio Antivirals Initiative (PAI) was established in 2006. The primary goal of the PAI is to facilitate the discovery and development of antiviral drugs to stop the excretion of immunodeficiency-associated vaccine-derived poliovirus (iVDPV) in B cell-deficient individuals. This review summarizes the major progress that has been made in the development of safe and effective poliovirus antivirals and highlights the candidates that have shown promising results in vitro, in vivo, and in clinical trials.
1. Introduction
Poliomyelitis (polio) is a highly contagious and debilitating disease caused by poliovirus. Poliovirus has three serotypes; each can cause poliomyelitis in humans. Poliovirus infects human cells via the specific poliovirus receptor—CD155—and replicates primarily in the intestines [1]. It can also spread to the central nervous system, resulting in paralysis. The mode of transmission is primarily via the fecal–oral route and, less frequently, via contaminated food or water. Neonates, infants, and children under 5 years of age are the most vulnerable populations for polio [2]. In most cases, infected children have mild cold-like symptoms and can recover without medical intervention [3]. However, in rare cases (<1–2%), patients can suffer neurological damage and develop permanent paralysis or even die [3]. Since the late 1980s, the Global Polio Eradication Initiative (GPEI) has helped to distribute and administer over three billion doses of live attenuated oral polio vaccines (OPVs or Sabin vaccines) to children living in developing countries, achieving greater than a 99% reduction in global polio cases [2]. As both serotype 2 and serotype 3 wild polioviruses (WPVs) have been declared eradicated globally, and serotype 1 WPV remains in circulation in only two countries (Afghanistan and Pakistan) [4], we have never been so close to a polio-free world.
OPVs induce mucosal immunity against WPVs via limited replication in the gastrointestinal tract [5,6,7]. However, OPVs can also potentially cause vaccine-associated paralytic polio (VAPP), a rare adverse event when an administered OPV reverts to neurovirulence, resulting in paralysis in some recipients or unimmune persons in close contact [8,9,10]. The risk for VAPP has been estimated at 4.7 cases per million births globally, with incidents more frequently reported in recipients living in low-income countries who had taken more than three OPV doses and those from middle/high-income countries who were unvaccinated or who had taken only one OPV dose [11]. The persistent replication of an OPV in the gut could also lead to the reversion of virulence and allow the shedding of vaccine-derived polioviruses (VDPVs), which can spread among populations with low vaccine coverage, leading to circulating vaccine-derived polioviruses (cVDPVs) that can cause outbreaks of paralysis [12,13]. Moreover, B cell-deficient immunocompromised persons can become chronically infected, resulting in immunodeficiency-associated VDPV (iVDPV) [14,15,16,17]. Hence, these vaccine-related viruses pose great threats to a polio-free world, even after the eradication of WPVs.
In 2006, the Polio Antivirals Initiative (PAI) was established at the Task Force for Global Health as a multi-partner collaboration including the Bill & Melinda Gates Foundation, the World Health Organization (WHO), the US Centers for Disease Control and Prevention (CDC), the US National Institutes of Health (NIH), the US Food and Drug Administration (FDA), Rotary International, and the Jeffrey Modell Foundation. The PAI’s primary goal is to develop safe and effective antiviral drugs to stop vaccine poliovirus shedding in immunodeficient recipients of OPVs and to mitigate the threat of prolonged poliovirus excretion to a polio-free world after the endgame (https://www.taskforce.org/polio-antivirals-initiative/ (accessed on 6 October 2024)).
This review summarizes the major efforts made in the discovery of anti-poliovirus small molecules and the progress achieved in clinical development. It also discusses the challenges encountered along the way and suggests future directions that may facilitate the discovery and development of more effective antivirals for treating infections associated with cVDPV, iVDPV, or the accidental release of other live polioviruses during or after the endgame.
2. Poliovirus Biology
Poliovirus belongs to the genus Enterovirus in the Picornaviridae family of 158 species, including many viruses (e.g., coxsackieviruses, echoviruses, hepatitis A virus, and rhinoviruses) that are known to cause significant human diseases. All picornaviruses are nonenveloped and have an icosahedral protein coat of 30 nm in diameter encapsidating a small, single-stranded positive-sense RNA genome [18].
There are three serotypes of poliovirus that are differentiated by the antigenic sites in the viral capsid protein [19]. All three serotypes are very similar in the structure of the viral capsid protein. The poliovirus capsid has 60 protomers assembled in an icosahedral structure, each containing four polypeptides (VP1, VP2, VP3, and VP4) arranged in 12 identical pentamers [20] (Figure 1a). VP4 is located on the inner side of the capsid shell in contact with the viral genome, while VP1–VP3 form star-shaped mesas covering the external surface of the shell at the five-fold axes, surrounded by deep canyons and three-bladed propellers [21]. In poliovirus, a hydrophobic pocket is formed under the canyon floor surrounding each five-fold axis of the viral capsid, which is usually occupied by one or more fatty acid-like natural ligands (pocket factors) and is accessible through a small pore [22] (Figure 1b). The interaction of the pocket factor with the hydrophobic pocket impacts virion thermal stability, and a point mutation (Phe-to-Leu) at residue 1134 of the ligand-binding site alters the temperature sensitivity of the Sabin 3 poliovirus [23]. The receptor-mediated poliovirus attachment induces a series of structural rearrangements in viral particles for subsequent uncoating and viral RNA (vRNA) transport and alters viral particle sedimentation from 160 S (mature virion) to 135 S (A particle) [24,25,26]. Following the translocation from the interior of the mature virion, the N-terminus of VP1 and myristoyl-VP4 become externalized in the 135 S particle to allow liposome binding and the formation of ion channels in lipid bilayers [24,25]. The 130 S particles are the intermediates in the process of receptor-mediated virus entry and are sensitive to proteases. Subsequent proteolytical removal of the first 31 amino acids of VP1 blocks the membrane association of the 135 S particles and allows vRNA release via the translocation pore in the bilayer, resulting in empty viral particles that sediment at 80 S [24,25,26].
Figure 1.
Poliovirus structure and viral genome and polyprotein organization. (a) Cryo-EM structure of poliovirus serotype 1 complexed with three domain CD155. Image from the RCSB PDB (RCSB.org) of PDB ID 1DGI [27]. (b) Schematic illustration of hydrophobic pocket in the viral capsid filled with pocket factor. (c) Organization of poliovirus genome and viral polyprotein processing (images in (b,c) were created with BioRender.com).
De novo vRNA synthesis and protein translation produce a single large polyprotein that is cleaved and processed sequentially by viral proteases (2A, 3C, and 3CD) to yield P1, P2, and P3 precursors [28,29,30] (Figure 1c). The P1 precursor is further cleaved by viral protease 3CD to produce VP0, VP1, and VP3, which assemble into an empty capsid. VP0 is a myristoylated immature protein that is autocatalytically processed into myristoyl-VP4 and VP2 for vRNA encapsidation [31]. The P2 precursor is cleaved to produce viral protease 2A and non-structural proteins 2B and 2C [32]. The P3 precursor is split into 3AB and 3CD, followed by a proteolytical process, resulting in membrane binding 3A, RNA priming 3B (VPg), protease 3C, and RNA-dependent polymerase 3D (3Dpol), respectively [30,32]. In addition to membrane association, viral proteins 2B, 2C, and 3A are also involved in replication complex formation, while viral protease 3C assists in capsid formation [33,34,35]. RNA primer VPg is covalently attached to the 5′ end of positive strand vRNA and is uridylylated by 3Dpol to form VPgpUpU for the initiation of vRNA synthesis [30,33] (Figure 1c).
4. Summary and Future Directions
Although extensive progress has been made in developing antiviral drugs targeting poliovirus in the past decades, none has achieved regulatory approval for therapeutic use. Poor pharmacokinetics, low oral bioavailability, toxicity, and drug resistance stand among the many issues that hinder clinical development. The standards for safety, tolerability, and oral bioavailability could be even higher for polio antiviral drug approval, considering that the potential target population is primarily children under 5 years old and immunocompromised individuals. Another significant factor is the as-yet-undefined regulatory pathway to approval for a rare condition such as iVDPV excreters.
Drug development from de novo molecule design to clinical investigation to final approval is a long, costly journey full of uncertainties even when the pathway is reasonably well defined. The entire process can easily span 10–15 years or more, from conceiving an idea to achieving the final approval. The approach of drug repurposing, which is to reinvestigate existing drugs for new applications, has gained considerable interest during the COVID-19 pandemic. In addition to reducing time and saving money, the largest benefit of repurposing licensed drugs is the ability to take an accelerated approval path for new indication(s) because licensed drugs have already passed the toxicity tests, and many have post-licensure or post-marketing surveillance data available. This approach can significantly shorten the antiviral development cycle. One such successful example is azidothymidine (AZT). Originally developed for anti-cancer treatment, AZT was discovered by the US NIH/NCI-led drug screening program to be a potent antiretroviral agent and was approved by the US FDA as a therapeutic drug for treating HIV infections in 1987 after fast-track clinical trials [91]. Remdesivir is a drug approved for treating patients with COVID-19-associated hospitalizations. Remdesivir’s intracellular metabolites GS-441524 monophosphate and triphosphate are the nucleotide analogs of the viral RNA polymerase inhibitor [92]. Our team tested the potential of remdesivir and its metabolites in inhibiting poliovirus replication without success (CDC unpublished data).
In addition to repurposing licensed drugs, the pools of screened molecules can be expanded to include compounds under investigation or in databases. Previously, this strategy helped to successfully identify a synthetic agonist of peroxisome proliferator-activated receptor β/δ as a promising lead compound with broad-spectrum anti-influenza activity in vitro and in ovo after screening over 70,000 compounds in the LOPAC and Maybridge libraries [93]. Although candidate drugs selected by this approach may still need to proceed through the regular approval process, it will save considerable time in compound design and synthesis. Additionally, artificial intelligence, such as machine learning-driven frameworks, should be leveraged for more efficient drug selection and optimization. Single cell-led systems biology pipelines and other emerging technologies could also be applied to facilitate the identification of promising candidates [94].
In summary, despite the challenges and obstacles, there is progress in the development of antiviral agents that are essential in stopping the excretion of iVDPV in immune-deficient patients. At present, the most promising prospect is the combination of pocapavir and imocitrelvir (which shows synergistic antiviral activity and a very low resistance rate in vitro), which has progressed through the early stages of non-clinical and clinical development.
Author Contributions
Conceptualization, H.X. and C.C.B.; methodology, E.E.R. and H.-M.L.; investigation, E.E.R. and H.-M.L.; resources, C.C.B.; writing—original draft preparation, H.X. and F.O.; writing—review and editing, H.X., B.A.M. and R.M.B. All authors have read and agreed to the published version of the manuscript.
Funding
The Bill & Melinda Gates Foundation (BMGF) provided support for the Polio Antivirals Initiative. The completion of this review article was provided by CDC intramural support.
Conflicts of Interest
The authors declare no conflicts of interest. The opinions in this review are those of the authors and do not necessarily represent the official position of the Centers for Disease Control and Prevention. The use of trade names is for identification purposes only and does not constitute an endorsement by the Centers for Disease Control and Prevention or the US Government.
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