Rhein Inhibits Cell Development and Aflatoxin Biosynthesis via Energy Supply Disruption and ROS Accumulation in Aspergillus flavus

Aspergillus flavus and its carcinogenic secondary metabolites, aflatoxins, not only cause serious losses in the agricultural economy, but also endanger human health. Rhein, a compound extracted from the Chinese herbal medicine Rheum palmatum L. (Dahuang), exhibits good anti-inflammatory, anti-tumor, and anti-oxidative effects. However, its effect and underlying mechanisms against Aspergillus flavus have not yet been fully illustrated. In this study, we characterized the inhibition effect of rhein on A. flavus mycelial growth, sporulation, and aflatoxin B1 (AFB1) biosynthesis and the potential mechanism using RNA-seq analysis. The results indicate that A. flavus mycelial growth and AFB1 biosynthesis were significantly inhibited by 50 μM rhein, with a 43.83% reduction in colony diameter and 87.2% reduction in AFB1 production. The RNA-seq findings demonstrated that the differentially expressed genes primarily participated in processes such as spore formation and development, the maintenance of cell wall and membrane integrity, management of oxidative stress, the regulation of the citric acid cycle, and the biosynthesis of aflatoxin. Biochemical verification experiments further confirmed that 50 μM rhein effectively disrupted cell wall and membrane integrity and caused mitochondrial dysfunction through disrupting energy metabolism pathways, leading to decreased ATP synthesis and ROS accumulation, resulting in impaired aflatoxin biosynthesis. In addition, a pathogenicity test showed that 50 μM rhein inhibited A. flavus spore growth in peanut and maize seeds by 34.1% and 90.4%, while AFB1 biosynthesis was inhibited by 60.52% and 99.43%, respectively. In conclusion, this research expands the knowledge regarding the antifungal activity of rhein and provides a new strategy to mitigate A. flavus contamination.


Introduction
Aspergillus flavus has been found to contaminate peanuts, maize, and wheat during cultivation, storage, processing, and transportation [1,2]. A. flavus also produces highly carcinogenic secondary metabolites called aflatoxins, of which aflatoxin B 1 is classified as a grade 1 carcinogen [3,4].The consumption of aflatoxin-contaminated food can cause poisoning, which may lead to hepatocellular carcinoma, seriously endangering the life and health of both humans and livestock [5].Studies have shown that over 120 different countries have established maximum permissible levels of aflatoxin contamination in food products [6].It is therefore important to develop rapid, efficient, and safe measures to address the problems associated with AFB 1 contamination, given the serious threat it poses to human health.Biological, physical, and chemical methods have been employed to prevent the contamination of A. flavus in food [7].Biological measures, such as endophytic Aspergillus fumigatus and lactic acid bacteria, are efficient in inhibiting the growth of A. flavus and lessening mycotoxin production [8,9].Physical methods, such as γ-irradiation of maize artificially inoculated with A. flavus, also resulted in a reduction in aflatoxins.In recent years, compounds from natural plants, including cinnamaldehyde, citral, and eugenol, have shown excellent antifungal performance against A. flavus and aflatoxin biosynthesis, owing to their eco-friendly properties [10].Therefore, it is imperative to develop natural compounds to effectively prevent A. flavus growth and aflatoxin contamination.
In the current study, we investigated the effects of rhein on A. flavus mycelium growth, spore formation, and AFB 1 biosynthesis.Rhein was found to significantly diminish the pathogenicity of A. flavus on both maize and peanut seeds.An analysis of the transcriptomic data showed that differential gene expression was involved in conidium formation and development (wetA, BrlA, AbaA), cell wall and membrane structure, oxidative stress response, the citrate cycle, and aflatoxin biosynthesis (aflA, aflC, aflO, aflQ).Our study provides new strategies for the prevention of aflatoxin contamination.

Effect of Rhein on A. flavus Growth, Spore Formation, and AFB 1 Production
To examine the antifungal effects of rhein on mycelium growth and AFB 1 production, 2 µL of A. flavus spore solution (1 × 10 6 spores/mL) was inoculated into PDA medium with varying concentrations of rhein (0, 25, or 50 µM), then incubated at 30 • C for 5 days.The results demonstrate that A. flavus mycelium growth was significantly inhibited by treatment with 25 and 50 µM rhein.Additionally, the mycelium became dense and the colony diameter was reduced by 32.34% and 43.83%, respectively.Regarding the formation of A. flavus spores, it was observed that the number of spores and conidiophores decreased significantly with increasing rhein concentration, where the number of spores was significantly reduced by 41.32% and 63.18% under the 25 and 50 µM rhein treatments, respectively.Electron microscopy analysis revealed that the surface of the conidia without rhein treatment was regular and the shape was plentiful, while the morphology of rheintreated A. flavus spores appeared shrunken and irregular (Figure 1A-C).TLC and HPLC analysis showed that, compared to the control, AFB 1 production decreased by 76.5% and 87.2% after treatment with 25 and 50 µM rhein, respectively, suggesting a dose-dependent inhibition of AFB 1 biosynthesis (Figure 1D,E).Additionally, the dry weight of mycelia also decreased significantly with increasing rhein concentration (Figure 1F).In summary, rhein showed significant inhibitory effects against A. flavus mycelium growth, spore formation, and AFB 1 yield; moreover, 50 µM rhein showed better inhibition of A. flavus mycelium growth, sporulation, and AFB 1 .Based on these results, the A. flavus treated with 50 µM rhein was selected for RNA-seq analysis.showed significant inhibitory effects against A. flavus mycelium growth, spore formation, and AFB1 yield; moreover, 50 µM rhein showed better inhibition of A. flavus mycelium growth, sporulation, and AFB1.Based on these results, the A. flavus treated with 50 µM rhein was selected for RNA-seq analysis.

Transcriptomic Analysis
The A. flavus treated with 50 µM rhein was selected for RNA-seq analysis with triple biological replicates in order to explicate the underlying mechanism through which rhein affects A. flavus mycelium growth and aflatoxin biosynthesis.The results show 633 differentially expressed genes (DEGs) in rhein-treated A. flavus, with 150 DEGs upregulated and 483 DEGs downregulated compared to the control.To further elucidate the function of the DEGs, enrichment analysis was conducted.The results reveal that the DEGs were primarily linked to the biosynthetic pathway of secondary metabolites, metabolic pathways, and the citric acid cycle, as indicated by the KEGG enrichment analysis (Figure 2A).GO enrichment analysis revealed that DEGs were associated with conidium formation and development, the cell wall and membrane, the hydrogen peroxide metabolic process, and oxidoreductase activity (Figure 2B-D).
To better elucidate the underlying mechanism, the representative DEGs were classified into four categories, including conidium formation and development, cell wall and cell membrane, glycolysis, citrate cycle, oxidative stress, and aflatoxin biosynthesis (Table 1).

Transcriptomic Analysis
The A. flavus treated with 50 µM rhein was selected for RNA-seq analysis with triple biological replicates in order to explicate the underlying mechanism through which rhein affects A. flavus mycelium growth and aflatoxin biosynthesis.The results show 633 differentially expressed genes (DEGs) in rhein-treated A. flavus, with 150 DEGs upregulated and 483 DEGs downregulated compared to the control.To further elucidate the function of the DEGs, enrichment analysis was conducted.The results reveal that the DEGs were primarily linked to the biosynthetic pathway of secondary metabolites, metabolic pathways, and the citric acid cycle, as indicated by the KEGG enrichment analysis (Figure 2A).GO enrichment analysis revealed that DEGs were associated with conidium formation and development, the cell wall and membrane, the hydrogen peroxide metabolic process, and oxidoreductase activity (Figure 2B-D).
To better elucidate the underlying mechanism, the representative DEGs were classified into four categories, including conidium formation and development, cell wall and cell membrane, glycolysis, citrate cycle, oxidative stress, and aflatoxin biosynthesis (Table 1).    1 and the subsequent biochemical verification experiments.

Effect of Rhein on the Hydrophobicity of A. flavus
To verify the differential expression of conidial hydrophobin genes, the effect of rhein on the hydrophobicity of A. flavus was investigated.The results demonstrate that bromophenol blue solution and sterile water fully penetrated the surface of the rheintreated A. flavus mycelium into the medium as compared to the control.The mycelial surface was observed using a stereoscopic microscope, and at the same magnification, the sterile water droplets on the surface of A. flavus colonies treated with rhein were found to be smaller (Figure 3).These results show that treatment with rhein inhibits the hydrophobicity of the cell surface of the mycelia.

Effect of Rhein on the Hydrophobicity of A. flavus
To verify the differential expression of conidial hydrophobin genes, the effect of rhein on the hydrophobicity of A. flavus was investigated.The results demonstrate that bromophenol blue solution and sterile water fully penetrated the surface of the rhein-treated A. flavus mycelium into the medium as compared to the control.The mycelial surface was observed using a stereoscopic microscope, and at the same magnification, the sterile water droplets on the surface of A. flavus colonies treated with rhein were found to be smaller (Figure 3).These results show that treatment with rhein inhibits the hydrophobicity of the cell surface of the mycelia.

Effect of the Rhein on the Integrity of A. flavus Cell Wall
To study the effect of rhein on A. flavus cell wall integrity, the strains were cultured for 4 days under the reagent CFW.The results unveil that A. flavus strains were more sensitive to CFW after rhein treatment than the controls (Figure 4A,B).Additionally, the integrity of the cell wall was examined through CFW staining, showing a decrease in CFW fluorescence intensity with increasing rhein concentration (Figure 4C).These results suggest that rhein disrupts A. flavus cell wall synthesis.

Effect of the Rhein on the Integrity of A. flavus Cell Wall
To study the effect of rhein on A. flavus cell wall integrity, the strains were cultured for 4 days under the reagent CFW.The results unveil that A. flavus strains were more sensitive to CFW after rhein treatment than the controls (Figure 4A,B).Additionally, the integrity of the cell wall was examined through CFW staining, showing a decrease in CFW fluorescence intensity with increasing rhein concentration (Figure 4C).These results suggest that rhein disrupts A. flavus cell wall synthesis.

Effect of Rhein on the Integrity of Cell Membrane
Different concentrations of SDS were introduced into PDA medium to examine the effect of rhein on the integrity of A. flavus cell membranes.The results demonstrate that the inhibition rate of rhein-treated A. flavus reached 11.2% and 39.1% under the conditions of 100 and 200 µg/mL SDS, respectively.Rhein-treated A. flavus was more sensitive than the control group (Figure 5A,B).Additionally, PI staining revealed that the red fluores-

Effect of Rhein on the Integrity of Cell Membrane
Different concentrations of SDS were introduced into PDA medium to examine the effect of rhein on the integrity of A. flavus cell membranes.The results demonstrate that the inhibition rate of rhein-treated A. flavus reached 11.2% and 39.1% under the conditions of 100 and 200 µg/mL SDS, respectively.Rhein-treated A. flavus was more sensitive than the control group (Figure 5A,B).Additionally, PI staining revealed that the red fluorescence intensity gradually increased with the concentration of rhein (Figure 5C).These results reveal that the addition of rhein disrupts the cell membrane of A. flavus.To validate the analysis of RNA-seq data, the intracellular ROS accumulation, H2O2, and ATP contents were measured.The results demonstrate that, accompanied by the downregulated expression of catalase, peroxidase, and glutamate cysteine ligase-related genes (Figure 6A), the intracellular H2O2 content of A. flavus increased (Figure 6B), which was in agreement with the results of the transcriptome analysis.The intracellular ATP content of A. flavus also decreased slightly after rhein treatment (Figure 6C).In addition, the results of DCFH-DA staining demonstrate that A. flavus mycelia treated with rhein exhibited stronger green fluorescence than those untreated with rhein (Figure 6D), indicating that rhein induced the accumulation of ROS.To validate the analysis of RNA-seq data, the intracellular ROS accumulation, H 2 O 2 , and ATP contents were measured.The results demonstrate that, accompanied by the downregulated expression of catalase, peroxidase, and glutamate cysteine ligase-related genes (Figure 6A), the intracellular H 2 O 2 content of A. flavus increased (Figure 6B), which was in agreement with the results of the transcriptome analysis.The intracellular ATP content of A. flavus also decreased slightly after rhein treatment (Figure 6C).In addition, the results of DCFH-DA staining demonstrate that A. flavus mycelia treated with rhein exhibited stronger green fluorescence than those untreated with rhein (Figure 6D), indicating that rhein induced the accumulation of ROS.

Effect of the Rhein on A. flavus Pathogenicity on Crop Seeds
To investigate the effect of rhein on the sporogenesis and the AFB 1 yield of A. flavus on crop seeds, different concentrations of rhein were incubated for 5 days with maize and peanut seeds infected with A. flavus spore suspension.The results indicate that the colonization ability of A. flavus on peanut and maize seeds was reduced after treatment with rhein (Figure 7A).The number of spores on the surface of the seeds was reduced by 90.4% and 34.1%, respectively, in comparison to the control group, following treatment with 50 µM of rhein (Figure 7B).Additionally, the TLC and HPLC results demonstrate the inhibition of AFB 1 production.With the 50 µM rhein treatment, the AFB 1 yield of A. flavus on peanuts and maize decreased by 60.52% and 99.43%, respectively (Figure 7C,D).These results clearly demonstrate that rhein significantly inhibits the pathogenicity of A. flavus on maize and peanut seeds.

Effect of the Rhein on A. flavus Pathogenicity on Crop Seeds
To investigate the effect of rhein on the sporogenesis and the AFB1 yield of A. flavus on crop seeds, different concentrations of rhein were incubated for 5 days with maize and peanut seeds infected with A. flavus spore suspension.The results indicate that the colonization ability of A. flavus on peanut and maize seeds was reduced after treatment with rhein (Figure 7A).The number of spores on the surface of the seeds was reduced by 90.4% and 34.1%, respectively, in comparison to the control group, following treatment with 50 µM of rhein (Figure 7B).Additionally, the TLC and HPLC results demonstrate the inhibition of AFB1 production.With the 50 µM rhein treatment, the AFB1 yield of A. flavus on peanuts and maize decreased by 60.52% and 99.43%, respectively (Figure 7C,D).These results clearly demonstrate that rhein significantly inhibits the pathogenicity of A. flavus on maize and peanut seeds.

Discussion
Developing safe and effective antifungal drugs is urgently needed to reduce threat posed by A. flavus to cereals and food.In our study, the effects of rhein, a compou from traditional Chinese medicine, on A. flavus mycelium growth, sporulation, and AF biosynthesis were characterized.The results demonstrate that rhein disrupted A. flav

Discussion
Developing safe and effective antifungal drugs is urgently needed to reduce the threat posed by A. flavus to cereals and food.In our study, the effects of rhein, a compound from traditional Chinese medicine, on A. flavus mycelium growth, sporulation, and AFB 1 biosynthesis were characterized.The results demonstrate that rhein disrupted A. flavus cell wall and membrane integrity, thereby inhibiting its growth and sporulation.Additionally, an RNA-seq analysis and subsequent validation demonstrated that mitochondrial dysfunction and the accumulation of intracellular ROS might lead to the inhibition of aflatoxin biosynthesis.
Rhein treatment significantly inhibited cell growth and development in A. flavus.Various regulators and transcription factors regulate the A. flavus spore-forming process.It has been reported that conidia formation and maturation in A. flavus are mainly governed by BrlA, AbaA, and WetA [24].The AbaA gene plays a role in conidial cell differentiation and is activated by BrlA at metaphase [25,26], while the wetA gene, activated by AbaA in anaphase, participates in synthesizing key conidial cell wall components [27].In our study, rhein treatment substantially reduced the A. flavus spore count, and the expression of genes related to conidial growth, such as AFLA_052030 (wetA), AFLA_082850 (BrlA), AFLA_029620 (AbaA), and AFLA_044790, was significantly downregulated (Table 1).These findings suggest that rhein may inhibit spore formation in A. flavus.In addition, RodA and RodB are conidial surface proteins, with RodA playing a role in the surface rod structure and RodB contributing to the conidial cell wall structure in Aspergillus fumigatus [28,29].In our study, the bromophenol blue solution diffused rapidly and was absorbed on the surface of rhein-treated mycelium (Figure 3).Furthermore, the expression of genes related to hydrophobic proteins (AFLA_098380, AFLA_014260) was significantly downregulated.This is in agreement with the results of the hydrophobicity assay in the Afper1 gene deletion strain studied by Lv et al. [30].These results suggest that rhein treatment may have reduced the hydrophobicity of the mycelium surface.
The cell wall and membrane of the fungi are dynamic structures which are essential for maintaining cell viability and integrity, making them promising targets for antifungal treatment [31][32][33][34][35].In this study, CFW staining showed that rhein disrupted cell wall synthesis, and genes involved in cell wall protein synthesis (AFLA_061960) were also downregulated.However, transcriptome data analysis demonstrated that gene expression of chitin synthetase was upregulated, suggesting that upregulated chitin synthetase might contribute to compensating for the destroyed cell wall after rhein treatment.In addition, PI staining demonstrated that the red fluorescence intensity was increased, suggesting cell membrane damage.Similar phenomena have been observed in A. flavus cell membranes when treated with honokiol [36], (E)-2-hexenal [37], and phenyllactic acid [38].Moreover, the gene expression levels of AFLA_007630 and AFLA_039810, which are involved in membrane protein synthesis, were significantly downregulated.This suggests that rhein may induce impaired synthesis of the cell wall and membrane, leading to the disruption of cell components.These results also indicate that the antifungal activity of rhein may target the integrity of the cell membrane and cell wall.
It is well known that mitochondria are organelles that generate ATP through oxidative phosphorylation reactions, providing energy to the cell [39].Oxidative phosphorylation occurs during the citric acid cycle (TCA) in the mitochondria [40].Previous studies have indicated that mitochondrial dysfunction leads to the accumulation of ROS by reducing ATP levels [41].In our study, genes associated with the TCA cycle, including citrate synthetase and succinyl-CoA synthetase, were significantly downregulated after rhein treatment (Table 1).This finding mirrors the genetic changes observed in A. flavus treated with estragole [42].In addition, A. flavus treated with rhein exhibited a remarkable decrease in intracellular ATP levels, which aligns with the findings of Duan et al. [43] regarding A. flavus treated with 1-octanol.These results reveal that rhein affects the changes in enzymes in other metabolic pathways, such as the TCA cycle, leading to mitochondrial dysfunction and ultimately the accumulation of ROS.Peroxisomes are an important component of eukaryotic cells, participating in various cellular physiological processes and being capable of rapidly producing and removing H 2 O 2 and O 2 , thereby regulating the dynamic changes in ROS levels [44][45][46].In this study, the genes encoding catalase and peroxidase (AFLA_096210, AFLA_034380) were significantly downregulated after treatment with rhein (Figure 6A).Subsequently, experimental verification showed that the intracellular H 2 O 2 content was increased in A. flavus treated with rhein.These results suggest that H 2 O 2 accumulation disrupts oxidation reduction (redox) homeostasis.In addition, glutathione biosynthesis is also involved in oxidative stress, with glutathione ligase reported as the key enzyme catalyzing glutathione biosynthesis [47].Elevated levels of ROS also promote mitochondrial and metabolic dysfunction, resulting in oxidative stress [48].Our transcriptome data show that the transcriptional level of the glutathione ligase gene (AFLA_001980) was remarkably downregulated (Table 1).We also assessed the intracellular ROS level in A. flavus using DCFH-DA staining and noted the dose-dependent increase in fluorescence intensity with rhein treatment.These results suggest that rhein triggered oxidative stress, resulting in a significant accumulation of ROS, consistent with the intracellular ROS level observed in A. flavus treated with methyl 2-methylbutyrate [49].Therefore, we speculate that rhein treatment might cause changes in the intracellular peroxisomes of A. flavus, which disrupted the redox balance and subsequently led to ROS accumulation.
Aflatoxin biosynthesis involves a complex regulatory network composed of multiple genes and enzymatic reactions, regulated by the pathway-specific transcription factor aflR and several structural genes, including aflA, aflB, aflC, aflO, aflQ, aflR, and aflS.Additionally, it is also governed by environmental conditions, such as light, nutrient sources, and oxidative stress [50][51][52][53].According to previous reports, three proteins, aflA, aflB, and aflC, are jointly involved in the synthesis of norsolorinic acid (NOR) in the biosynthesis pathway of aflatoxin [5].AflO, which encodes O-methyltransferase, converts demethylsterigmatocystin (DMST) to a new compound, sterigmatocystin (ST), and aflQ is a P-450 monooxygenase that converts O-methylsterigmatocystin (OMST) to AFB 1 [3].In our study, the production of AFB 1 by rhein-treated A. flavus growing on both PDA medium and grain was significantly decreased.Analysis of transcriptome data revealed that the genes involved in the pathway for the aflatoxin synthesis (aflA, aflC, aflO, and aflQ) were all remarkedly downregulated after rhein treatment.In A. flavus, deletion of catalase CTA1 contributes to the intracellular ROS accumulation and downregulation of aflC, aflD, and aflQ, consequently leading to impaired AFB 1 biosynthesis [54].Additionally, the accumulated intracellular ROS in A. flavus treated with curcumin also leads to a reduction in aflatoxin production [55].In our study, the downregulated expression levels of aflA, aflC, aflO, and aflQ and decreased AFB 1 biosynthesis may be attributed to the ROS accumulation triggered by rhein treatment.

Conclusions
In summary, rhein inhibited the growth and development of A. flavus by interfering with cell wall and membrane synthesis.Additionally, rhein might disrupt energy metabolism, cause mitochondrial dysfunction, and decrease ATP synthesis, leading to ROS accumulation, thereby inhibiting AFB 1 biosynthesis (Figure 8).Furthermore, rhein treatment effectively inhibited mycelial growth and the production of AFB 1 in both peanut and maize seeds.Our findings indicate that rhein can be considered as a potential novel agent for preventing fungal infections in food and feedstuffs.
with cell wall and membrane synthesis.Additionally, rhein might disrupt energy metabolism, cause mitochondrial dysfunction, and decrease ATP synthesis, leading to ROS accumulation, thereby inhibiting AFB1 biosynthesis (Figure 8).Furthermore, rhein treatment effectively inhibited mycelial growth and the production of AFB1 in both peanut and maize seeds.Our findings indicate that rhein can be considered as a potential novel agent for preventing fungal infections in food and feedstuffs.

Strains, Chemicals, and Medium
The model strain A. flavus NRRL 3357, a kind gift from Prof. Zhumei He (Sun Yat-sen University, China), was used in this study.Rhein (CAS:478-43-3, 98.5% purity) was obtained from J&K Scientific Ltd. (Beijing, China).Peanut and maize seeds were sourced from local markets.Potato dextrose agar medium (PDA) was selected for fungal growth, conidial production, and aflatoxin B1 (AFB1) biosynthesis.Rhein was dissolved in DMSO to form a solution with a final concentration of 10 mg/mL.

Effect of Rhein on Phenotype, Spore, and Aflatoxin B1 Production of A. flavus
The effects of rhein on A. flavus colony size, spore morphology, and aflatoxin B1 yield were examined with PDA medium.Rhein at different concentrations (25 and 50 µM) was added to PDA medium to create treatment groups according to previously described methods [56], while the same volume of DMSO was added to the control group.The spore

Strains, Chemicals, and Medium
The model strain A. flavus NRRL 3357, a kind gift from Prof. Zhumei He (Sun Yat-sen University, China), was used in this study.Rhein (CAS:478-43-3, 98.5% purity) was obtained from J&K Scientific Ltd. (Beijing, China).Peanut and maize seeds were sourced from local markets.Potato dextrose agar medium (PDA) was selected for fungal growth, conidial production, and aflatoxin B 1 (AFB 1 ) biosynthesis.Rhein was dissolved in DMSO to form a solution with a final concentration of 10 mg/mL.

Effect of Rhein on Phenotype, Spore, and Aflatoxin B 1 Production of A. flavus
The effects of rhein on A. flavus colony size, spore morphology, and aflatoxin B 1 yield were examined with PDA medium.Rhein at different concentrations (25 and 50 µM) was added to PDA medium to create treatment groups according to previously described methods [56], while the same volume of DMSO was added to the control group.The spore solution (1 × 10 6 spores/mL) was inoculated, and the colony diameter was recorded after culturing at 30 • C for 5 days.The morphology of spores and conidial pedicles was observed using a light microscope, stereoscopic microscope, and electron microscope.
AFB 1 was extracted and detected using the methods described in a previous study [42].In brief, 25 µM or 50 µM of rhein were introduced into PDA medium, and 2 µL of spore solution was inoculated followed by incubation for 5 days at 30 • C. AFB 1 was then extracted by adding chloroform and distilled water (volume ratio of 1:1).Finally, AFB 1 was analyzed through HPLC and TLC.
To evaluate the impact of rhein on mycelium production, 25 or 50 µM of rhein was introduced into liquid medium containing 50 mL DPY.Subsequently, A. flavus spores were inoculated to achieve a concentration of 1 × 10 6 spores/mL.After shaking for 3 days at 30 • C, the mycelium was filtered and dried for 6 h, then weighed.

RNA-seq Analysis
The A. flavus spore suspension and 50 µM rhein were grown in PDA medium for 60 h at 30 • C, with DMSO replacing rhein in the control group.The TRIzol method by Thermo Fisher, Shanghai, China, was employed to extract total RNA from the mycelia with three biological replicates, and the quality and integrity of RNA were assessed.Subsequently, Shanghai Yuanxin Biotechnology Co., Ltd.(Shanghai, China) constructed the cDNA library for RNA-seq analysis.Each sample with three biological replicates, |log 2 fold change| > 1, and p value < 0.05 was defined as a differentially expressed gene.KEGG enrichment analysis and GO were performed using Goatools and KOBAS software, respectively.Raw transcriptome data were entered into the CNCB database under CRA accession number CRA015824.

Effect of Rhein on Hydrophobicity of A. flavus
Hydrophobicity was determined using the method of a previous study with slight modifications [57]. A. flavus spores were point-inoculated on PDA medium supplemented with rhein (50 µM), then incubated for a duration of 4 days at 30 • C. Subsequently, the colony surface was treated with sterile water and 2.5% bromophenol blue solution for 12 h and then photographed.

Effect of Rhein on A. flavus Cell Wall
A. flavus spore suspension was inoculated into PDA medium supplemented with rhein (50 µM) and fluorescent brightener 28 (CFW, 100 and 200 µg/mL) and incubated at 30 • C for 3 days.Moreover, the A. flavus colony diameter was recorded and photographed to evaluate the effect of rhein on A. flavus cell walls.
A. flavus spore suspension and rhein (25 and 50 µM) were added to 50 mL DPY medium and incubated for 48 h.Following the staining method described in a previous study [58], the mycelia were collected, washed, and then stained with Calcofluor white stain (CFW) for 1 min in the dark on slides.Finally, confocal laser scanning microscopy (CLSM) was utilized to observe the mycelia.

Effect of Rhein on A. flavus Cell Membrane
A. flavus spore was point-inoculated onto PDA supplemented with 50 µM rhein and different concentrations of sodium dodecyl sulphate (SDS, 100, and 200 µg/mL), and then it was incubated at 30 • C for 4 days.Then, the colony diameters were assessed and the relative inhibition rate was calculated to evaluate the effect of rhein on inhibition of A. flavus cell membranes.
Similarly, A. flavus mycelia were treated as described above.A. flavus spore suspension and rhein (25 and 50 µM) were added to 50 mL DPY medium and allowed to grow for 48 h.The mycelia were then collected and washed.Subsequently, propidium iodide (PI) staining was carried out at 37 • C for 30 min.Finally, the mycelia were collected and examined through CLSM.

Determination of A. flavus Intracellular ROS, H 2 O 2, and ATP Content
A. flavus spore suspension and various rhein concentrations (25 and 50 µM) were added to 50 mL DPY medium and allowed to grow for 48 h at 30 • C. The mycelia were treated as described above, then stained with DCFH-DA and incubated in the dark at 37 • C for 30 min.Finally, samples were visualized using CLSM.
A. flavus spore was point-inoculated on PDA medium with cellophane with or without rhein (50 µM) and incubated at 30 • C for 60 h.Subsequently, A. flavus mycelia were ground into powder and collected.The H 2 O 2 and ATP contents were determined with reference to the biochemical kit (Solarbio Science, Beijing, China).

Effect of Rhein on A. flavus Mycelium Growth and AFB 1 Yield on Peanuts and Maize
Different concentrations of rhein (25 and 50 µM) and A. flavus spore suspension were added into 50 mL sterile water until a final concentration of 1 × 10 6 spores/mL was achieved.Then, sterilized peanuts and corn were placed in the water and shaken for 1 h.The treated peanuts and corn were then evenly placed in a dish covered with filter paper and cultured at 30 • C in the dark for 5 days.To maintain appropriate moisture levels, sterile water was added periodically during this incubation period.The infected peanut and corn seeds were placed in triangular flasks after 5 days of incubation, and the spores were counted after 30 min of thorough agitation after adding 20 mL of sterile water.AFB 1 was extracted and determined as described above.

Statistical Analysis
In this study, all experiments were performed in triplicate and presented as mean ± SD, followed by significance analysis using SAS software (version 9.2), with statistical significance considered at p < 0.05.

Figure 2 .
Figure 2. Transcriptome analysis of rhein-treated and untreated A. flavus mycelia.(A) KEGG pathway enrichment; (B) enrichment of biological processes; (C) analysis of the enrichment of cellular components in DEGs; and (D) analysis of DEGs for molecular function enrichment.The red boxes indicated the related items inTable 1 and the subsequent biochemical verification experiments.

Figure 2 .
Figure 2. Transcriptome analysis of rhein-treated and untreated A. flavus mycelia.(A) KEGG pathway enrichment; (B) enrichment of biological processes; (C) analysis of the enrichment of cellular components in DEGs; and (D) analysis of DEGs for molecular function enrichment.The red boxes indicated the related items inTable 1 and the subsequent biochemical verification experiments.

Figure 3 .
Figure 3. Determination of the hydrophobicity of A. flavus treated with or without rhein.

Figure 3 .
Figure 3. Determination of the hydrophobicity of A. flavus treated with or without rhein.

Figure 7 .
Figure 7. Effect of rhein on A. flavus pathogenicity to crop seeds.(A) Growth of A. flavus on seeds with or without rhein treatment; (B) number of A. flavus spores on seeds; (C) TLC; and (D) HPLC analysis of AFB 1 yield.** represents p < 0.01, *** represents p < 0.001.

Table 1 .
The representative DEGs in the control compared to the rhein treatment.

Table 1 .
The representative DEGs in the control compared to the rhein treatment.