Developing Process Designs for Bioreﬁneries—Deﬁnitions, Categories, and Unit Operations

: In this review, we focus on the literature that described the various unit operations in a process design ﬂowsheet of bioreﬁneries. We begin by establishing the accepted deﬁnitions of a bioreﬁnery, go on to describe how to categorize bioreﬁneries, and ﬁnally review the literature on bioreﬁnery process designs by listing the unit operation in each process design. Distinguishing bioreﬁneries based on feedstock, the types of processing units, and the products emanating from the bioreﬁnery are discussed. such as cellulose and hemicellulose can be hydrolyzed to sugars and subsequently fermented to alcohols. Lignin, however, cannot be fermented, and is thus predominantly used in energy generation or chemical extraction. While cellulose and hemicellulose are polysaccharides that can be hydrolyzed to sugars and then fermented to ethanol, lignin cannot be used in fermentation processes, but it may be useful for other purposes (chemical extraction or energy generation). they


Introduction
The process design of biorefineries has been built upon the backbone of traditional chemical-based process synthesis, analysis, and design, an area that has been well-studied for nearly over a century [1]. Chemical-based process synthesis has evolved over time to identify the processing routes required to produce desired products, the identification of involved chemical reactions, the selection and design of unit operations involved in the processing route, the calculation of utilities, waste, emissions, etc. [2]. However, biomass-based processing have a long way go in this regard. Although some biomass processing routes, such as corn to ethanol andwaste to biogas, have been well-studied and established, most other biomass processing routes remain commercially non-competitive and open to continuing research and development [3][4][5][6][7].
The primary reason to develop process design models of biorefineries is to construct functional and conceptual process flowsheets while utilizing data from biomass processing experiments available in the literature. Once benchmark cases are developed, future research and its anticipated results can be used for scaling up the pathway, as a blue-print to design demonstration biorefineries, etc. [8]. Even incremental technological developments and new research in one specific unit process can have positive implications on complementary technologies in the system. Moreover, minor changes in one unit operation can influence the economics of the overall design, with, for example, probable reduction 74 simulators are best suited for use. Table 1. Commercial software packages for process design flowsheet simulation.

Mass balance
 -  -Mass and heat balance In this review, we focus on the literature that has detailed process design flowshee

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In this review, we limit our focus on process design, and decide not 57 optimization. Biomass processing and utilization has been studied in de 58 optimization perspectives [2,[14][15][16]. However, a literature review where various 59 similar types of biomass processing routes is listed along with the products, is s 60 majority of the existing process models are conceived due to the availability of a 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefine

62
where the product is the priority and the feedstock have been selected based on 63 However, with an increasing need to find alternative pathways for the produc 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analy 65 process design methodology to find novel solutions [19,20]. In this methodology, 66 and processing routes have been narrowed down, the next step is an appropriate 67 design software.

56
In this review, we limit our focus on process design, and decide not to cover process 57 optimization. Biomass processing and utilization has been studied in detail from process 58 optimization perspectives [2,[14][15][16]. However, a literature review where various unit operations for 59 similar types of biomass processing routes is listed along with the products, is still missing. A vast 60 majority of the existing process models are conceived due to the availability of a feedstock and the 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefineries been modelled

62
where the product is the priority and the feedstock have been selected based on targeted products.

63
However, with an increasing need to find alternative pathways for the production of sustainable 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analysis often relies on 65 process design methodology to find novel solutions [19,20]. In this methodology, once the feedstock 66 and processing routes have been narrowed down, the next step is an appropriate choice of a process 67 design software.

68
Process design models are often developed on dedicated process simulation software, which 69 permits mass, energy and emission balances that can be extrapolated to make economic decisions.

70
These process design tools/software are quite powerful in their calculations. Their accuracy depends 71 on the level of detail provided by the user and the familiarity of the user with the software itself.

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Biorefinery process models have been developed on Aspen Plus, SuperPro Designer, Matlab and

EXCEL EXTEND SuperPRO ASPEN gPROMS
In this review, we focus on the literature that has detailed process design flowsheets of

56
In this review, we limit our focus on process design, and decide not to cover pr 57 optimization. Biomass processing and utilization has been studied in detail from pr 58 optimization perspectives [2,[14][15][16]. However, a literature review where various unit operation 59 similar types of biomass processing routes is listed along with the products, is still missing. A 60 majority of the existing process models are conceived due to the availability of a feedstock an 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefineries been mod

62
where the product is the priority and the feedstock have been selected based on targeted prod 63 However, with an increasing need to find alternative pathways for the production of sustai 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analysis often reli 65 process design methodology to find novel solutions [19,20]. In this methodology, once the feed 66 and processing routes have been narrowed down, the next step is an appropriate choice of a pr 67 design software.

68
Process design models are often developed on dedicated process simulation software, w 69 permits mass, energy and emission balances that can be extrapolated to make economic decis

EXCEL EXTEND SuperPRO ASPEN gPROMS
In this review, we focus on the literature that has detailed process design flowshee

56
In this review, we limit our focus on process design, and decide not 57 optimization. Biomass processing and utilization has been studied in de 58 optimization perspectives [2,[14][15][16]. However, a literature review where various 59 similar types of biomass processing routes is listed along with the products, is s 60 majority of the existing process models are conceived due to the availability of a 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefine

62
where the product is the priority and the feedstock have been selected based on 63 However, with an increasing need to find alternative pathways for the produc 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analy 65 process design methodology to find novel solutions [19,20]. In this methodology,

66
and processing routes have been narrowed down, the next step is an appropriate 67 design software.

68
Process design models are often developed on dedicated process simulatio 69 permits mass, energy and emission balances that can be extrapolated to make e

56
In this review, we limit our focus on process design, and decide not to cover process 57 optimization. Biomass processing and utilization has been studied in detail from process 58 optimization perspectives [2,[14][15][16]. However, a literature review where various unit operations for 59 similar types of biomass processing routes is listed along with the products, is still missing. A vast 60 majority of the existing process models are conceived due to the availability of a feedstock and the 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefineries been modelled

62
where the product is the priority and the feedstock have been selected based on targeted products.

63
However, with an increasing need to find alternative pathways for the production of sustainable 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analysis often relies on 65 process design methodology to find novel solutions [19,20]. In this methodology, once the feedstock 66 and processing routes have been narrowed down, the next step is an appropriate choice of a process 67 design software.

EXCEL EXTEND SuperPRO ASPEN gPROMS
In this review, we focus on the literature that has detailed process design flowsheets of

56
In this review, we limit our focus on process design, and decide not to cover pr 57 optimization. Biomass processing and utilization has been studied in detail from pr 58 optimization perspectives [2,[14][15][16]. However, a literature review where various unit operation 59 similar types of biomass processing routes is listed along with the products, is still missing. A 60 majority of the existing process models are conceived due to the availability of a feedstock an 61 wealth of knowledge in processing the feedstock [12,17,18]. Rarely have biorefineries been mod

62
where the product is the priority and the feedstock have been selected based on targeted prod 63 However, with an increasing need to find alternative pathways for the production of sustai 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analysis often reli 65 process design methodology to find novel solutions [19,20]. In this methodology, once the feed 66 and processing routes have been narrowed down, the next step is an appropriate choice of a pr 67 design software.

68
Process design models are often developed on dedicated process simulation software, w 69 permits mass, energy and emission balances that can be extrapolated to make economic decis

EXCEL EXTEND SuperPRO ASPEN gPROMS
In this review, we focus on the literature that has detailed process design flowshee

56
In this review, we limit our focus on process design, and decide not However, with an increasing need to find alternative pathways for the produc 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analy 65 process design methodology to find novel solutions [19,20]. In this methodology,

66
and processing routes have been narrowed down, the next step is an appropriate 67 design software.

68
Process design models are often developed on dedicated process simulatio

Mass and heat balance
In this review, we focus on the literature that has detailed process des

56
In this review, we limit our focus on process design, and decide not to cover pr where the product is the priority and the feedstock have been selected based on targeted prod 63 However, with an increasing need to find alternative pathways for the production of sustai 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analysis often reli 65 process design methodology to find novel solutions [19,20]. In this methodology, once the feed 66 and processing routes have been narrowed down, the next step is an appropriate choice of a pr 67 design software.

68
Process design models are often developed on dedicated process simulation software, w 69 permits mass, energy and emission balances that can be extrapolated to make economic decis

EXCEL EXTEND SuperPRO ASPEN gPROMS
In this review, we focus on the literature that has detailed process design flowshee

56
In this review, we limit our focus on process design, and decide not However, with an increasing need to find alternative pathways for the produc 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analy 65 process design methodology to find novel solutions [19,20]. In this methodology,

66
and processing routes have been narrowed down, the next step is an appropriate 67 design software.
In this review, we focus on the literature that has detailed process des

56
In this review, we limit our focus on process design, and process design methodology to find novel solutions [19,20]. In this m 66 and processing routes have been narrowed down, the next step is an 67 design software.

56
In this review, we limit our focus on process design, and decide not However, with an increasing need to find alternative pathways for the produc 64 liquid fuels, chemicals, fertilizers, and energy from biomass, biorefinery analy 65 process design methodology to find novel solutions [19,20]. In this methodology,

66
and processing routes have been narrowed down, the next step is an appropriate 67 design software.

56
In this review, we limit our focus on process design, and

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Microsoft Excel [21][22][23][24][25][26][27].   In this review, we focus on the literature that has detailed process design flowsheets of biorefineries, irrespective of the software used. However, we begin first by establishing the accepted definitions of a biorefinery, then go on to describe how to categorize biorefineries, and finally review the literature on biorefinery process designs by listing the type of biorefinery. Finally, we discuss the categorization of biorefineries based on feedstock, type of processing units in designed flowsheets, and biomass-based products emanating from the biorefinery.

Context of a Biorefinery
Several definitions of biorefineries exist, however one of the most accommodating explanations of biorefining was given by the International Energy Agency as "the sustainable processing of biomass into a spectrum of marketable products and energy" [28]. The biorefinery concept embraces a wide range of processing and separation technologies able to modify biomass resources (wood, corn, beetroot, sugarcane, switch grass, etc.) into fractions (carbohydrates C5 or C6, lipids, proteins, triglycerides, etc.) which can further be converted to value-added products, biofuels, biomaterials, fertilizers, and chemicals. The biorefinery concept is analogous to contemporary petroleum refineries, which produce a wide variety of fuels and products from crude oil; however, in biorefineries, biomass replaces crude oil as the raw material. It might be argued that crude oil is, in fact, derived from biomass, by several hundreds of years of slow decay; however, in this context crude oil is not considered as biomass.
Bioenergy will be an important contributor in meeting future energy demands from clean and sustainable energy sources. This means that constant innovation in biomass processing technologies is needed to develop a sustainable bio-based society which is capable of looking beyond bioenergy and biofuels, and tapping into the opportunity to produce a myriad of products stemming from biorefineries [29]. The reliable and efficient production of biofuels can also provide stability to the volatile global oil prices [29]. In fact, with the steadfast growth in the transportation sector, the demand for renewable fuels is only going to increase. While biofuels provide a cleaner alternative to existing fuel options, the electric vehicles have a strong market penetration and compete with both the biofuel and fossil fuel production industry [30]. Consequently, the challenge for current and future biorefinery development will be the efficient and cost-effective production of biofuels, while ensuring that they search for alternative products. The coproduction of biomaterials and biochemicals will provide a new dimension to the biorefinery business model, by reducing the dependence on liquid biofuels for revenues [31]. Currently, the prominent biomass-based commodities manufactured by converting biomass include starch, oil, cellulose, biogas, and biofuels [19,20]. In addition, bio-chemicals such as lactic acid, glycerin, succinic acid, amino acids, levulinic acid, sorbitol, and xylitol, along with commercially available bio-based products such as lubricants, solvents, polymers, paper, paint, plastics, adhesives, dyes, detergents, cleaning compounds, inks, and adhesives, are also by-products of a biorefinery [19,20,32]. It is estimated that the need to find alternative sources to derive these products from will continue to provide a market segment that is willing to adapt to new feedstock in the supply chain if the economic benefits can be proven [33,34]. Most of the existing biofuels and biochemicals that are currently being produced in single-pathway productions are not within the confines of a biorefinery setup (since they do not utilize more than one feedstock and do not produce multiple products). However, this does not mean that the importance of large-scale single feedstock to single-product biorefineries can be undermined in studying the collaborative style of designing processes for a biorefinery. The industrial setups of combining synergetic biorefineries, such as the one in Kalundburg, Denmark, provide valuable expertise in this context. In Kalundburg, several bio-industries can combine their material flows in order to reach a closed-loop utilization of all streams in a system: the residue and waste heat from one bio-industry is utilized by another, eventually giving rise to an integrated bio-industrial system [35]. This is an example wherein different companies have worked together to maximize the utilization of by-product streams, thereby reducing unused streams and converting them into profitable products. The interdependence of systems is an embodiment of the biorefinery concept, where the integration of conversion processes and equipment can give rise to a circular system to produce biofuels, biochemicals, and a wide range of other bio-based products from various types of biomass, while still being able to produce bio-energy as a 'side stream'.
In the past, the selection of feedstock for biorefining was primarily done on the basis of sustainable year-round supplies of biomass, thus allowing for the biorefinery to be classified based on type of feed [36][37][38]. While optimizing the direct production costs of bio-based products is an important area to focus, 40-60% of the total operating costs of a biorefinery are spent on purchasing or growing the feedstock [39]. Thus, feedstock still remains the primary driver for a biorefinery design; on a per-gallon basis of ethanol production the feedstock price equates to 30-32% of the total production cost [25]. Amongst the different types of biomass, lignocellulosic biomass has been extensively studied for utilization in a biorefinery. Galbe et al. [40] had made comparisons between the types of biorefineries based on lignocellulosic feedstock and starch containing biomasses. Due to familiarity with the crop and its processing, coupled with land use, socio-economic and environmental issues, lignocelluloses are preferable to the starch-containing materials, thus drawing the first category of a biorefinery based on feed [40]. Increasing attention is also being given to biofuels produced from second-generation lignocellulosic biomass, as this biomass does not compete with food crops. Each biomass, whether lignocellulosic or starch based, can be processed in various ways, depending upon the required product. This led to researchers reviewing biorefineries based on the possible processing pathways deployed for targeted feedstock. Damartzis and Zabaniotou reviewed the thermochemical conversion to second-generation biofuels through an integrated process design [41]. Bulushev and Ross reviewed the conversion of biomass via pyrolysis and gasification [42]. Bridgwater and Double reviewed the production costs of liquid fuels from biomass via various routes using a techno-economic simulation [43]. These approaches were succeeded with the idea of an integrated process design capabale of coverting multiple feedstock into various bio-products, such as fuels, chemicals, and energy, thereby providing a flexible approach by varying the constrainsts of the system. [12,29,44]. Centi et al., expanded the techno-economic view to entail the social and political impact of second-generation biofuels [45]. Cherubini et al., expanded their scope to combine first and second generation biofuels in their discussion [46]. Kokossis and Yang highlighted that with increasingly more complex process designs, higher degrees of freedom in feedstock choices, processing technologies, and variety of products available, the role of systems engineering for optimizing and modelling biorefinery process designs is more pronounced now than it has been in recent years [47]. The possibility of utilizing a wide array of biomass through various processing techniques to produce a variety of products has led to a complex optimization problem. In searching for methodologies to solve this optimization problem, process design has become a central reliable approach towards looking at different processing routes for various types of biomass to produce the most profitable bio-based products. As a result, researchers have defined their interest in either technologies, products or a combination of both, and successfully reviewed the available literature in their selected area of focus. Some reviewers have further intensified their focus by selecting specific biomasses and studying them against various processing technologies, or vice-versa. In this paper, we begin by describing biorefineries based on feedstock, processes and products.

Feedstock
The term 'feedstock' refers to the raw materials used in a biorefinery. Biomass is a broad term that entails a wide variety of plants species, each of which vary in their physical structure and chemical composition. Regardless of the phenotype, biomass can been classified into four main components: lipids, carbohydrates (starch, cellulose, and hemicelluloses), lignin, and proteins. Biomass synthesized via the photosynthetic process converts atmospheric carbon dioxide and water into sugars. Plants use this sugar to synthesize complex materials to provide energy for themselves. Proteins in biomass is synthesized much the same way as in all eukaryotic organisms, where amino acids serve as the building blocks of proteins. Plants extract nitrates (a form of nitrogen) from roots and convert them into amino acids. Ribosomes cumulate amino acids to form an elongating peptide chain, which often combines with phosphate or other chemical groups to form proteins. One of the most important requirements of a biorefinery is the consistent, regular, and renewable supply of feedstock, making this the defining factor for several biorefinery designs.
Renewable carbon-based raw materials for biorefineries are provided from four different sectors [29]: Further distinctions can be made within dedicated crops and residues from agricultural, forestry and industrial activities; however, these are beyond the purview of this paper. Biomass can be broken down into three building blocks categorized as: carbohydrates and lignin; triglycerides; mixed organic residues and proteins [29].

Carbohydrates and Lignin
Carbon, hydrogen, and oxygen are the most common biomass components found in plant feedstock and make up carbohydrates (such as starch, cellulose and hemicellulose). Six-carbon, or C6, single-molecule 'monosaccharide' sugars (C 6 H 12 O 6 ) include glucose, galactose and mannose, while the most common five-carbon sugars (C 5 H 10 O 5 ) are xylose and arabinose. Sugarcane and sugar beet are the two most important sugar crops, and together with corn (a starch crop), they supply almost all the feedstock food the ethanol that is produced today [48].
Lignin is the third polymeric organic component of lignocellulose. It is a complex chemical compound most commonly derived from wood, and an integral part of the secondary cell walls of plants [49]. It is usually located between the cellulose microfibrils, where it serves to resist compression forces (increases mechanical strength). Lignin is very complex in structure. When viewed in three dimensions, this polymer is composed of different phenolic units bound together by ether and carbon-carbon bonds. A closer look at the complexity of lignin chemical structure is presented in Figure 1. As a biopolymer, the handling of lignin is more difficult due to its lack of a defined primary structure. Its main purpose is to provide structural integrity by strengthening wood (xylem cells) in trees. The random and high degree of polymerization of lignin has made it an intensive field of study, and thereby more difficult to convert into smaller chains of similar compounds [50]. The three more commonly isolated monolignol monomers, methoxylated to various degrees are: (1) P-coumaryl alcohol; (2) Coniferyl alcohol; (3) Sinapyl alcohol. down into three building blocks categorized as: carbohydrates and lignin; triglycerides; mixed organic residues and proteins [29].

Carbohydrates and Lignin
Carbon, hydrogen, and oxygen are the most common biomass components found in plant feedstock and make up carbohydrates (such as starch, cellulose and hemicellulose). Six-carbon, or C6, single-molecule 'monosaccharide' sugars (C6H12O6) include glucose, galactose and mannose, while the most common five-carbon sugars (C5H10O5) are xylose and arabinose. Sugarcane and sugar beet are the two most important sugar crops, and together with corn (a starch crop), they supply almost all the feedstock food the ethanol that is produced today [48] .
Lignin is the third polymeric organic component of lignocellulose. It is a complex chemical compound most commonly derived from wood, and an integral part of the secondary cell walls of plants [49]. It is usually located between the cellulose microfibrils, where it serves to resist compression forces (increases mechanical strength). Lignin is very complex in structure. When viewed in three dimensions, this polymer is composed of different phenolic units bound together by ether and carbon-carbon bonds. A closer look at the complexity of lignin chemical structure is presented in. As a biopolymer, the handling of lignin is more difficult due to its lack of a defined primary structure. Its main purpose is to provide structural integrity by strengthening wood (xylem cells) in trees. The random and high degree of polymerization of lignin has made it an intensive field of study, and thereby more difficult to convert into smaller chains of similar compounds [50]. The three more commonly isolated monolignol monomers, methoxylated to various degrees are: 1) P-coumaryl alcohol; 2) Coniferyl alcohol; 3) Sinapyl alcohol.  Starch (C 6 H 10 O 5 ) n is a very large polymer molecule, or 'polysaccharide', composed of thousands of glucose molecules. These molecules must be broken down into smaller chains called monosaccharides or disaccharides prior to being fermented. Corn and wheat are the most commonly used starch crops in a biorefinery [3,52,53]. Once sugars have been depolymerized (for starch crops) or extracted (from sugar crops) they can be easily fermented to ethanol, or used as a substrate for chemical reactions or enzymatic hydrolysis, presenting the opportunity to produce a wide variety of chemical products.
Lignocellulose is a complex raw material consisting of cellulose (35-45% of total dry weight), hemicellulose, (20-40%), and lignin (10-30%) [54]. Lignocellulose biomasses have a compact and rigid structure of cellulose and a close association of cellulose and hemicellulose with lignin, leaving very few reactive sites available for enzyme attachment. This is the primary reason that it does not degrade/degrades very slowly under the influence of microorganisms. A typical lignocellulosic structre can be seen in Figure 2. Cellulose (C 6 H 10 O 6 ) n consists of long chains of C6 (sugar) glucose molecule [55]. Glucose is different from starch in their configuration of bonds across the oxygen molecule that joins two hexose units. In addition, starch can be easily hydrolyzed to monomeric sugars in the presence of enzymes or acids, while cellulose is much more resilient to hydrolysis. Hemicellulose (C 5 H 8 O 5 ) n is an amorphous C5 sugar, which is easier to break down with chemicals and/or heat than cellulose. Lignin (C 9 H 10 O 2 (OCH 3 ) n ), is a complex chemical compound, usually located between the cellulose microfibrils, where it serves to resist compression forces (which increases mechanical strength). Polysaccharides such as cellulose and hemicellulose can be hydrolyzed to sugars and subsequently fermented to alcohols. Lignin, however, cannot be fermented, and is thus predominantly used in energy generation or chemical extraction. While cellulose and hemicellulose are polysaccharides that can be hydrolyzed to sugars and then fermented to ethanol, lignin cannot be used in fermentation processes, but it may be useful for other purposes (chemical extraction or energy generation). acted (from sugar crops) they can be easily fermented to ethanol, or used as a substrate for cal reactions or enzymatic hydrolysis, presenting the opportunity to produce a wide variety of cal products. ignocellulose is a complex raw material consisting of cellulose (35-45% of total dry weight), ellulose, (20-40%), and lignin (10-30%) [54]. Lignocellulose biomasses have a compact and rigid re of cellulose and a close association of cellulose and hemicellulose with lignin, leaving very active sites available for enzyme attachment. This is the primary reason that it does not e/degrades very slowly under the influence of microorganisms. A typical lignocellulosic e can be seen in Figure 2. Cellulose (C6H10O6)n consists of long chains of C6 (sugar) glucose ule [55]. Glucose is different from starch in their configuration of bonds across the oxygen ule that joins two hexose units. In addition, starch can be easily hydrolyzed to monomeric in the presence of enzymes or acids, while cellulose is much more resilient to hydrolysis. ellulose (C5H8O5)n is an amorphous C5 sugar, which is easier to break down with chemicals heat than cellulose. Lignin (C9H10O2(OCH3)n), is a complex chemical compound, usually between the cellulose microfibrils, where it serves to resist compression forces (which ses mechanical strength). Polysaccharides such as cellulose and hemicellulose can be lyzed to sugars and subsequently fermented to alcohols. Lignin, however, cannot be fermented, thus predominantly used in energy generation or chemical extraction. While cellulose and ellulose are polysaccharides that can be hydrolyzed to sugars and then fermented to ethanol, cannot be used in fermentation processes, but it may be useful for other purposes (chemical tion or energy generation). ignocellulosic biomass is available either as crop or as agricultural residue. Lignocellulosic ss can be produced via crop rotation or dedicated plantations of herbaceous plants. Large ts of cellulosic biomass can be produced via dedicated perennial herbaceous plant species, or rotation woody crops. Other sources of biomass are organic waste and residues such as those traw, wood waste from the pulp and paper industry, and forestry residues. The use of waste ss to produce fuels or products offers a way of creating value for society by displacing fossil ith material that would typically decompose over time and has no value in its current state iglycerides ils and fats are triglycerides consisting of glycerol, saturated, and unsaturated fatty acids. The length varies between C8 and C20, however 16, 18, and 20-carbon chain lengths are the most on (their chain length ranges between C8 and C20, but 16, 18 and 20 carbons are the most on). Vegetable and animal raw materials are the sources of oils and fats. However, soybean, Lignocellulosic biomass is available either as crop or as agricultural residue. Lignocellulosic biomass can be produced via crop rotation or dedicated plantations of herbaceous plants. Large amounts of cellulosic biomass can be produced via dedicated perennial herbaceous plant species, or short-rotation woody crops. Other sources of biomass are organic waste and residues such as those from straw, wood waste from the pulp and paper industry, and forestry residues. The use of waste biomass to produce fuels or products offers a way of creating value for society by displacing fossil fuels with material that would typically decompose over time and has no value in its current state [29].

Triglycerides
Oils and fats are triglycerides consisting of glycerol, saturated, and unsaturated fatty acids. The chain length varies between C8 and C20, however 16, 18, and 20-carbon chain lengths are the most common (their chain length ranges between C8 and C20, but 16, 18 and 20 carbons are the most common). Vegetable and animal raw materials are the sources of oils and fats. However, soybean, palm, rapeseed, and sunflower oil are the most dominant feedstock used globally for oil production, the most important in terms of worldwide use and production [44]. Currently, vegetable oils are being used for the production of biodiesel by treatment with alcohol of low molecular weight (usually ethanol or methanol) in the presence of an alkaline catalyst (usually NaOH or KOH) to produce esters and glycerin. Chemically, biodiesel is called a methyl ester if the alcohol used is methanol, and ethyl ester if ethanol is used. Vegetable oils have two reactive sites, the double bond in the unsaturated fatty acid chain and the acid group of the fatty chain. Both these reactive sites make vegetable oil a suitable substitute for biodiesel production [36]. Like sugar and starch crops, oilseed crops are characterized by low yield (maximum glucose recoveries of 75% and 88%) and the high use of inputs [57]. In the future however, food crops including oil crops will become highly controversial to be utilized for fuel production. Non-edible crops like Jatropha curcas and Salicornia bigelovii, which require lower inputs and are better suited to marginal lands, will then become the most widespread oil crops for biorefinery purposes, especially in dry and semiarid regions [58,59]. Waste vegetable oil is readily available from the food industry, processing plants, and households. These can also serve as valuable options for procuring feedstock and are a positive step in developing a circular economy [48].

Mixed Organic Fractions
Manure, proteins, and residues from fresh fruit and vegetable industries fall into this category and can be collectively called Organic Fraction of Municipal Solid Waste (OFMSW). The physical and chemical characteristics of these kinds of biomasses are varied and cannot be categorized due to their highly heterogeneous chemical compositions. Certain streams such as sewage sludge, manure from dairy and cattle farms, and residues from food processing have a very high moisture content (up to 70%), thereby making them less attractive for high temperature processes such as gasification [60]. Feedstock with high moisture content are more suited for anaerobic digestion to generate biogas. Other streams, such as OFMSW mixed with paper, cardboard, and plastics usually represent a high potential for energy recovery. The different properties and characteristics of the biomass waste require different conversion technologies, and hence an interconnected network of processing for biorefineries seems to be an ideal solution for this type of feedstock.

Proteins
Polypeptide chains are the structural elements of proteins. Polypeptide chains, when combined with fats, form lipoproteins, and when combined with polysaccharides form [61]. The molecular weights of proteins can vary from thousands to millions of Dalton. There are two general classes of protein molecules: fibrous and globular proteins. Fibrous proteins are typically elongated and insoluble. Globular proteins are generally compact, soluble, and spherical in shape. In more complex proteins, spherical units sometimes joined by non-covalent forces can form larger structures that have a more defined shape. Proteins can be found in plants and animals. For human consumption, cereals (e.g., wheat, barley and sorghum) and legumes (green peas, lentils, beans and chickpeas) are the primary sources of non-animal-based proteins. Increased demand for proteins has led to the commercial production of soy-, wheat-, casein-, and whey-based proteins, used both in food and non-food industries [61]. Biomasses such as algae and grass have been studied for their protein use [62,63]. Apart from these protein resources, the biorefinery approach is encouraging the utilization of residual streams such as the recovery of protein from the press cakes left behind after recovering oil from oilseeds of sunflower seeds or rapeseeds [64,65].

Processes
The aim of technological processes in biorefining is to depolymerize and deoxygenate the biomass to convert it into valuable products within a biorefinery approach. Often, several technological processes must be applied in parallel, or subsequently. These processes are also called fractionation process of the biomass/feedstock, since they ensure that the carbohydrates, sugar, lipids, etc., can be made available for further refining. Broadly, these processes can be divided into five categories: thermochemical, hydrothermal, biochemical, mechanical/physical and chemical processes.

Thermochemical Processes
The two main thermochemical processes for converting biomass into energy and chemical products are gasification and pyrolysis. Gasification involves heating the biomass at a high temperature (>700 • C) with low oxygen levels to produce a mixture of H 2 , CO, CO 2 (collectively known as syngas) and CH 4 [39]. Syngas can be used directly for electricity, or as a chemical platform for the production of fuels (FT-fuels, dimethyl ether, ethanol, isobutene, etc.) or chemicals (alcohols, organic acids, ammonia, methanol, etc.). Pyrolysis breaks down biomass at temperatures between 300-600 • C and in the absence of oxygen. The three products obtained after pyrolysis are pyrolytic oil (liquid), solid charcoal, and light gases [66]. Based on process conditions during pyrolysis, the product yields can be varied. However, the most desirable product after pyrolysis is bio-oil as it is a precursor to obtaining various fuels and chemicals downstream. [29]. Bio-oil's application as a transportation biofuel is problematic and its use as a source for chemical production is under-developed [67]. Direct combustion is the oldest and most common thermochemical process; biomass is burned in an oxygen-rich environment, primarily for the production of heat. However, the losses and inefficiencies of this technology have led to advances in other, more efficient processing pathways.

Low-Temperature Processes
Hydrothermal treatment is one of the most commonly used lower temperature processes, which typically involves cooking biomass in water at high temperatures (120-250 • C), with residence times ranging from 10-50 mins, and under high pressure (up to 20 bar) [68]. Liquid hot water and uncatalyzed steam explosion are the two most commonly used subcategories of hydrothermal pretreatment [68]. Generally, this method is applied at a large scale and does not require prior size reduction, thus reducing capital and operating costs [69]. However, according to Hosseini and Shah, a 50 % increase in energy efficiency can be achieved when the size of wood chips is reduced [70].
Hydrothermal treatment removes only small amounts of lignin (the acid soluble fraction), and changes the lignin structure by melting, coagulating and subsequently depolymerizing the cellulose fibers. Therefore, it is not possible to extract lignin in its functional form from hydrothermally pretreated solids [71]. However, hydrothermal treatment greatly increases the available surface area of cellulose (by non-chemical swelling), which significantly enhances possible sites for enzyme activity. The severity of pretreatment can be summarized by a single factor called R o (R o = t exp ((T − 100)/14.75), which links the effects of time, t (min) and temperature, T ( • C) [71]. Steam pretreatment, due to its high severity, (above 3.0) is one of the most used methods for creating high concentrations of sugar degradation products. However, a high process severity (above 4.0) also leads to the formation of inhibitors such as furfural (from dehydration of pentoses) and 5-hydroxyl-methyl-furfural (from dehydration of hexoses). Both degradation products and acetic acid (along with small amounts of other organic acids-levulinic and formic) formed during the treatment inhibit yeast. At higher concentrations, formic acid is more inhibitory than levulinic acid, which, in turn, is more inhibitory than acetic acid. The concentrations at which these compounds become inhibitory depends on the severity of the pretreatment. Larsson et al., reported that acetic acid, formic acid, and levulinic acid concentrations up to 100 mmol/l increase the ethanol yield, however, higher concentrations than this resulted in a decrease in the ethanol yield and other fermenting microorganisms when present in high concentrations [72]. Other by-products include the lignin degradation products present in the form of long-chain polymers [73]. Although these are seen as degradation products, when the process is targeting ethanol and biogas, however, in the biorefinery context, these (levulinic, and formic, acetic, and other organic acids) might as well be the target products due to their high market value. The kinetics of the process can also be designed to maximize their production and neglect the formation of the previously envisaged products like ethanol and biogas.
High-temperature treatments (upto 230 • C) require short residence time (as low as a few seconds), and low temperatures treatments (150-180 • C) require long residence time (up to a few hours), a trade-off amongst which can be calculated using the severity factor [74]. Generally, the established Energies 2020, 13, 1493 9 of 22 convention in the literature is that hydrothermal pretreatment does not include steam explosion. The distinction lies in the gradual heating and cooling before and after pretreatment respectively, a critical operational procedure, which is lacking in the case of steam explosion [68]. Hydrothermal treatment is gaining special interest as a pretreatment method for the ethanol industry, since it does not require any chemicals, and is simple in operation.

Biochemical Processes
Biochemical processes are carried out at relatively low temperatures (below 80 • C) as compared to thermochemical pathways. The most common types of biochemical processes are fermentation, enzymatic hydrolysis, and anaerobic digestion. During fermentation, the substrate is converted into alcohols and organic acids due to the action of microorganisms and/or enzymes. Anaerobic digestion occurs in the absence of oxygen at temperatures around 35-55 • C, where bacteria breakdown the biodegradable organic content of the substrate to form methane and carbon dioxide. Due to the large demand for liquid fuel for transportation, and the early discovery of sugarcane to ethanol pathway (and, subsequently, corn to ethanol pathways), ethanol is the most common fermentation product, but the production of other chemical compounds (e.g., hydrogen, methanol, succinic acid) is a growing area of research. Fermentation has been a well-known process from as early as the 1870s, when Louis Pasteur demonstrated that microorganisms can convert sugars to alcohol in the absence of oxygen. Despite the early knowledge of the process, the utilization of sugars for fuel production has been a rather slow and with fluctuations. Today, biochemical processes have evolved to use genetically modified microorganisms to produce targeted compounds. C6 sugars, however, remain the most frequent fermentation substrates, while pentose (sugars from hemicellulose), glycerol and other hydrocarbons require customized fermentation organisms to enable their conversion to ethanol and other products [75]. The main product from anaerobic digestion is biogas, which is a mixture of methane, carbon dioxide, and other gases. Methane from anaerobic digestion can be upgraded to 97% purity, which can be used as a substitute for natural gas [76].
Pretreatment is a pre-requisite step for converting lignocellulosic biomasses to sugars for fermentation to ethanol, while other products requires specifically designed processes. It involves the breaking up of a naturally resistant carbohydrate-lignin shield that limits the accessibility of enzymes to cellulose and hemicellulose. The pretreatment of lignocelluloses by physical/chemical/enzymatic means creates a stream rich in monomeric sugars, which can be converted biologically into fermentation products such as ethanol and/or biogas [77].

Mechanical Processes
Mechanical processes do not change the state or the composition of biomass; they only perform size reduction or separation of feedstock components [78]. These are typically the first steps in a biorefinery network because biomass utilization requires small particles to provide a large surface area for the conversion process to be efficient [69]. Biomass size reduction is achieved by either cutting or commuting processes that significantly change the particle size, shape, and bulk density of biomass. Separation processes segregate the components of the substrate, while extraction methods extract and concentrate valuable compounds from bulky, heterogeneous substrates.

Chemical Processes
Chemical processes can alter the chemical structure of the feedstock at molecular levels, when the biomass reacts with other compounds during the presence of catalysts. The most common chemical processes in biomass conversion are enzymatic hydrolysis and transesterification. In hydrolysis, acids and alkalis are used to depolymerize polysaccharides to monomeric sugars (e.g. cellulose to glucose). In transesterification vegetable oil is converted to methy or ethyl esters of fatty acids, commonly known as biodiesel. This process also coproduces glycerin, a chemical compound with diverse commercial uses [44]. Other important and common chemical reactions in biorefining are Fisher-Tropsch synthesis, methanisation, and steam reforming [79].

Products
The products of biorefinery systems can be grouped in two broad categories: chemicals and energy. Energy products are used to provide electricity, heat or transportation services, while material products are used for their chemical or physical properties. In some cases, a further distinction is required because some products, like bio-hydrogen or bioethanol, might be used either as fuels or as a chemical compound in chemical synthesis.
The fundamental idea is to make products from a biorefinery similar to those products that are currently being made available from petrochemical refineries. Biomass in this context proved to be an alternative to using fossil fuels while providing significant environmental benefits and similar downstream benefits, such as petrochemical refineries. The most important energy products that can be obtained from biorefineries are: (a) Gaseous biofuels (biogas, syngas, hydrogen, bio-methane); (b) Solid biofuels (pellets, lignin, charcoal); (c) Liquid biofuels for transportation (bioethanol, biodiesel, FT-fuels, bio-oil).
The most important chemical and material products are: The current manufacturing of bulk chemicals is based predominantly on crude oil and natural gas feedstock. The petrochemicals industry has developed alongside oil refining, thriving by exploiting cheap and readily abundant oil reserves. The petrochemical sector accounts for 14% of daily global oil use and around 8% of gas [80,81]. With this large dependence on hydrocarbons, the petrochemical industries have integrated with oil and gas refineries to evolve into large, flexible, highly efficient manufacturing units that maximize their co-location benefits to exploit the various energy and raw material streams for cost-effective chemical production. Petrochemical complexes produce primary chemical intermediates such as ethylene, propylene, butylene, and aromatics, which are further converted into intermediates for the plastics, textiles, solvents, and detergent markets. Ethylene by volume is the largest produced intermediate chemical by volume, with over 75 million tonnes produced globally every year [19]. Bioethanol can be dehydrated into ethylene, which can, in turn, be converted to propylene, butylene, and aromatics, thereby giving a glimpse of how biorefinery based models can seamlessly be integrated into existing markets.

Types of Biorefineries
An increased focus on studying biomass utilization and product creation from biomass, gives rise for the need to classify the types of biorefineries. With the current knowledge of the types of biofuels, feedstock, and products, a few classifications can be made based on: In order to develop a distinct and acceptable classification system, the important factors to take into account are [82]: (a) A broad definition encompassing the biorefinery area which is more accessible for different stakeholders; (b) Improved overall understanding of the advantages of biorefinery processing (multi-step and integrated process) over single-product processes; (c) Market implementation and acceptance of these concepts into the global community of scientists.
The development of a proper classification system was one of the main tasks of IEA Bioenergy Task 42 on Biorefineries, and shows the first set of classifications done on the basis of feedstock and technology being used (see Table 2). [ [89][90][91] Green biorefineries are gaining traction and increasing in popularity especially in northern European countries. Green biomass is separated into a fiber-rich press cake and protein-rich juice [87]. The bulk chemical are in the press cake (e.g., cellulose, starch and dyes) and green juice contains the proteins and free amino acids [87,92]. The green juice is a potential raw material for the production of high quality fodder and cosmetic proteins, human nutrition, chemicals (e.g., lactic acid and lysine), or can alternatively be used as a substrate for biogas production [87]. Another advantage of the green biorefinery is its ability to utilize versatile and abundant types of green biomasses [83]. A consolidated review of the types of green biorefineries and their processes is presented in Table 3.
Waste biorefinery predominantly utilizes food or municipal solid waste or "kitchen waste" as its feedstock. Since the feed for this biorefinery is labelled as waste streams from other industries, hence they are called waste 'utilizing' biorefineries. While different types of waste streams can be combined in one biorefinery, it is important to ensure that the input stream to biorefineries is structurally and compositionally similar, such that the processing steps can handle a certain degree of heterogeneity in the feedstock. Biorefineries utilizing waste/residual streams are shown in Table 4.  Whole-crop biorefinery utilizes crops and agriculture residue for biofuel and bio-product generation. Cereals were considered the early feedstock for whole crop biorefinery due to their rich starch content [52]. However, with the debate of food vs. fuel and advances in processing lignocellulose, agricultural residue is the preferred source of feed for whole crop biorefineries. Moreover, combining both the harvest from crops while processing the grain appears to be a more profitable option as opposed to just performing one of these tasks independently [106]. Table 5 shows whole-crop biorefineries utilizing different types of feed.
The lignocellulosic biorefineries are generally suited for producing products at an industrial scale, and utilize a variety of raw material (e.g., straw, reed, grass, wood, paper-waste) available at low prices [92]. It is also a better alternative to food crops since lignocellulosic feedstock does not compete with edible crops such as corn and sugarcane (see Table 6).
Marine species, such as microalgae, macroalgae, and seaweeds, have long been of interest due to their ability to grow in saline water, non-competence with land for growth, and potential to produce bio-products, and biofuels. The literature for the types of marine species feasible for utilization in a Energies 2020, 13, 1493 13 of 22 biorefinery context is very large and ever-growing. Table 7 highlights some of the species that have been isolated and explored for their use in a biorefinery.     These tables (Tables 2-7) describe the literature categorized on types of biorefineries and the processes mentioned and modelled (in most cases). Some other papers that deserve mention but have not detailed the unit processes in their description include a biorefinery based on palm oil which includes biomass gasification and catalytic technologies [147]. Sammons et al., combined process and economic modelling under a process systems approach to design an optimal product [12]. Laser, Jin, et al., developed seven process designs co-producing ethanol, Fischer Tropsch fuels, hydrogen, methane, and power, and three processes co-producing animal feed protein from switchgrass [148]. Dale et al., designed a biorefinery for protein feeds with fuels and chemicals [92]. Pinatti et al., described a biorefinery concept with eleven thermochemical processing routes and one biological route [149]. Bao et al., used an optimization-based approach to design integrated biorefineries [150]. Sharma et al., used a mixed-integer linear programming (MILP) model to obtain a multi-product, multi-platform biorefinery [151]. Tay et al., maximized economic performance coupled with minimal environmental impact in a fuzzy mathematical programming to obtain a biorefinery [14].

Conclusions
While the process design of biorefineries has gained more traction, there is still a long way to go before it can catch up with petrochemical process designs, which are readily available, intricately designed, and have undergone several decades of reiterative modelling exercise owing to active industrial collaboration. The mismatch between the number of process designs available for biorefineries and petrochemical refineries can further be attributed to the commercialization of the petrochemical industry, which has far more large-scale facilities that are operational as compared to industrial scale biorefineries. The path to developing biorefinery process design begins by using software that has traditionally been used for petrochemical refinery designing. This means that unit operations for processing biomass are currently not available by default in software libraries. Additionally, the chemical properties of biomass building blocks and intermediate biochemicals (due to their complex structures) have to be defined by users. These problems, compounded with limited input from the industry, have led researchers to rely on the published literature in order to design biorefineries. While some of the published literature details each unit operation and its respective operating conditions, others, for the most part, design biorefineries with a rather top view approach, aimed at demonstrating the economic feasibility of a particular biomass-processing pathway. Finding detailed and replicable process designs for biorefineries is arduous and many times not accurate, which led to the necessity of this study. The aim of consolidating the literature describing process design of biorefineries is threefold. Firstly, to identify and list the unit operations mentioned in the literature that can describe biorefinery process designs. In this step, all the unit operations available in the relevant publication are listed, presenting an early look into the processing pathway and its level of depth. Secondly, by categorizing these process designs based on the type of biomass, we can compare how processes are similar or different for a particular biomass processing and what products they yield. It would have been ideal if we could list the operating conditions of each unit operation, such as feed input, product quantities, and their yields. However, these are rather important details and require a more focused description, which leads us to the third aim of this paper. Finally, by mentioning whether the process design has been modelled or not, we are letting the readers know if they can expect further operational details of the process design. If the process design has been modeled, then data on fed input and output, yields, energy balance, reaction kinetics, etc., will be available along with its methodology in the respective publications. However, if the process has not been modeled, then it is safe to assume that only a blueprint of the process design, with fewer operational details, will be available. Single-feedstock to single-product pathway processes have not been considered as a biorefinery. Multiple feedstock or multiple products process designs are taken as the minimum satisfactory condition to be considered a biorefinery, which falls in agreement with the academically accepted definition of a biorefinery.
In the future, we aim to work towards describing more details of each unit operation, so that comparisons can be made between the replicability of each unit operation, allowing for more comprehensive techno-economical comparisons between processing pathways. Critical examination of each processing pathway can, in turn, lead to more robust process designs for biomass utilization.
Author Contributions: All of the authors were involved in preparing this manuscript. All authors have read and agreed to the published version of the manuscript.
Funding: This research received no external funding.