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Open AccessArticle Morphology, Composition, and Mixing State of Individual Aerosol Particles in Northeast China during Wintertime
Atmosphere 2017, 8(3), 47; doi:10.3390/atmos8030047
Received: 23 January 2017 / Revised: 16 February 2017 / Accepted: 20 February 2017 / Published: 24 February 2017
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Abstract
Northeast China is located in a high latitude area of the world and undergoes a cold season that lasts six months each year. Recently, regional haze episodes with high concentrations of fine particles (PM2.5) have frequently been occurring in Northeast China
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Northeast China is located in a high latitude area of the world and undergoes a cold season that lasts six months each year. Recently, regional haze episodes with high concentrations of fine particles (PM2.5) have frequently been occurring in Northeast China during the heating period, but little information has been available. Aerosol particles were collected in winter at a site in a suburban county town (T1) and a site in a background rural area (T2). Morphology, size, elemental composition, and mixing state of individual aerosol particles were characterized by transmission electron microscopy (TEM). Aerosol particles were mainly composed of organic matter (OM) and S-rich and certain amounts of soot and K-rich. OM represented the most abundant particles, accounting for 60.7% and 53.5% at the T1 and T2 sites, respectively. Abundant spherical OM particles were likely emitted directly from coal-burning stoves. Soot decreased from 16.9% at the T1 site to 4.6% at the T2 site and sulfate particles decrease from 35.9% at the T2 site to 15.7% at the T1 site, suggesting that long-range transport air masses experienced more aging processes and produced more secondary particles. Based on our investigations, we proposed that emissions from coal-burning stoves in most rural areas of the west part of Northeast China can induce regional haze episodes. Full article
(This article belongs to the Special Issue Morphology and Internal Mixing of Atmospheric Particles)
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Open AccessArticle Novel Aflatoxin-Degrading Enzyme from Bacillus shackletonii L7
Toxins 2017, 9(1), 36; doi:10.3390/toxins9010036
Received: 22 September 2016 / Revised: 10 January 2017 / Accepted: 11 January 2017 / Published: 14 January 2017
Cited by 1 | Viewed by 806 | PDF Full-text (3161 KB) | HTML Full-text | XML Full-text | Supplementary Files
Abstract
Food and feed contamination by aflatoxin (AF)B1 has adverse economic and health consequences. AFB1 degradation by microorganisms or microbial enzymes provides a promising preventive measure. To this end, the present study tested 43 bacterial isolates collected from maize, rice, and soil
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Food and feed contamination by aflatoxin (AF)B1 has adverse economic and health consequences. AFB1 degradation by microorganisms or microbial enzymes provides a promising preventive measure. To this end, the present study tested 43 bacterial isolates collected from maize, rice, and soil samples for AFB1-reducing activity. The higher activity was detected in isolate L7, which was identified as Bacillus shackletonii. L7 reduced AFB1, AFB2, and AFM1 levels by 92.1%, 84.1%, and 90.4%, respectively, after 72 h at 37 °C. The L7 culture supernatant degraded more AFB1 than viable cells and cell extracts; and the degradation activity was reduced from 77.9% to 15.3% in the presence of proteinase K and sodium dodecyl sulphate. A thermostable enzyme purified from the boiled supernatant was designated as Bacillus aflatoxin-degrading enzyme (BADE). An overall 9.55-fold purification of BADE with a recovery of 39.92% and an activity of 3.85 × 103 U·mg−1 was obtained using chromatography on DEAE-Sepharose. BADE had an estimated molecular mass of 22 kDa and exhibited the highest activity at 70 °C and pH 8.0, which was enhanced by Cu2+ and inhibited by Zn2+, Mn2+, Mg2+, and Li+. BADE is the major protein involved in AFB1 detoxification. This is the first report of a BADE isolated from B. shackletonii, which has potential applications in the detoxification of aflatoxins during food and feed processing. Full article
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Open AccessArticle Ligustrazine-Oleanolic Acid Glycine Derivative, G-TOA, Selectively Inhibited the Proliferation and Induced Apoptosis of Activated HSC-T6 Cells
Molecules 2016, 21(11), 1599; doi:10.3390/molecules21111599
Received: 30 August 2016 / Revised: 15 November 2016 / Accepted: 16 November 2016 / Published: 23 November 2016
Cited by 2 | Viewed by 553 | PDF Full-text (6395 KB) | HTML Full-text | XML Full-text
Abstract
Hepatic fibrosis is a naturally occurring wound-healing reaction, with an imbalance of extracellular matrix (ECM) during tissue repair response, which can further deteriorate to hepatocellular carcinoma without timely treatment. Inhibiting activated hepatic stellate cell (HSC) proliferation and inducing apoptosis are the main methods
[...] Read more.
Hepatic fibrosis is a naturally occurring wound-healing reaction, with an imbalance of extracellular matrix (ECM) during tissue repair response, which can further deteriorate to hepatocellular carcinoma without timely treatment. Inhibiting activated hepatic stellate cell (HSC) proliferation and inducing apoptosis are the main methods for the treatment of liver fibrosis. In our previous study, we found that the TOA-glycine derivative (G-TOA) had exhibited more significant inhibitory activity against HepG2 cells and better hydrophilicity than TOA, ligustrazine (TMP), and oleanolic acid (OA). However, inhibiting activated HSC proliferation and inducing apoptosis by G-TOA had not been reported. In this paper, the selective cytotoxicity of G-TOA was evaluated on HSC-T6 cells and L02 cells, and apoptosis mechanisms were explored. It was found that G-TOA could selectively inhibit the proliferation of activated HSC-T6 cells, induce morphological changes, early apoptosis, and mitochondrial membrane potential depolarization, increase intracellular free calcium levels, downregulate the expression of NF-κB/p65 and COX-2 protein, and decrease the ratio of Bcl-2/Bax, thereby inducing HSC-T6 cell apoptosis. Thence, G-TOA might be a potential antifibrosis agent for the therapy of hepatic fibrosis, provided that it exerts anti-fibrosis effects on activated HSC-T6 cells. Full article
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Open AccessReview Micronutrient Antioxidants and Nonalcoholic Fatty Liver Disease
Int. J. Mol. Sci. 2016, 17(9), 1379; doi:10.3390/ijms17091379
Received: 26 July 2016 / Revised: 12 August 2016 / Accepted: 17 August 2016 / Published: 23 August 2016
Cited by 3 | Viewed by 1332 | PDF Full-text (928 KB) | HTML Full-text | XML Full-text
Abstract
Nonalcoholic fatty liver disease (NAFLD) is one of the most important chronic liver diseases worldwide and has garnered increasing attention in recent decades. NAFLD is characterized by a wide range of liver changes, from simple steatosis to nonalcoholic steatohepatitis, cirrhosis, and hepatocellular carcinoma.
[...] Read more.
Nonalcoholic fatty liver disease (NAFLD) is one of the most important chronic liver diseases worldwide and has garnered increasing attention in recent decades. NAFLD is characterized by a wide range of liver changes, from simple steatosis to nonalcoholic steatohepatitis, cirrhosis, and hepatocellular carcinoma. The blurred pathogenesis of NAFLD is very complicated and involves lipid accumulation, insulin resistance, inflammation, and fibrogenesis. NAFLD is closely associated with complications such as obesity, diabetes, steatohepatitis, and liver fibrosis. During the progression of NAFLD, reactive oxygen species (ROS) are activated and induce oxidative stress. Recent attempts at establishing effective NAFLD therapy have identified potential micronutrient antioxidants that may reduce the accumulation of ROS and finally ameliorate the disease. In this review, we present the molecular mechanisms involved in the pathogenesis of NAFLD and introduce some dietary antioxidants that may be used to prevent or cure NAFLD, such as vitamin D, E, and astaxanthin. Full article
(This article belongs to the Special Issue Macro- and Micro-nutrient Antioxidants)
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Open AccessArticle Contamination and Risk Assessment of Heavy Metals in Lake Bed Sediment of a Large Lake Scenic Area in China
Int. J. Environ. Res. Public Health 2016, 13(7), 741; doi:10.3390/ijerph13070741
Received: 7 June 2016 / Revised: 12 July 2016 / Accepted: 14 July 2016 / Published: 21 July 2016
Cited by 2 | Viewed by 741 | PDF Full-text (2098 KB) | HTML Full-text | XML Full-text
Abstract
The exposure of heavy metals to lake bed sediment of scenic areas may pose risks on aquatic ecosystems and human health, however very few studies on risk assessment have been reported for scenic areas. Accordingly, this study determined concentration levels, and assessed contamination
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The exposure of heavy metals to lake bed sediment of scenic areas may pose risks on aquatic ecosystems and human health, however very few studies on risk assessment have been reported for scenic areas. Accordingly, this study determined concentration levels, and assessed contamination characteristics and risks, of heavy metals in lake bed sediment of National Scenic Areas Songhuahu (NSAS) in China. The concentrations of Zn, Cr, Pb, Ni, and Cu were determined in 29 bed sediment samples. Results showed that the mean values of Zn, Cr, Pb, Ni, and Cu were 92.69, 90.73, 38.29, 46.77, and 49.44 mg/kg, respectively. Pearson correlation coefficients indicated that organic matter was a major factor influencing distribution of heavy metals. The results for enrichment factors indicated that contamination rates and anthropogenic inputs of single heavy metals decreased in the order Cu > Ni > Pb > Cr > Zn; results of Nemerow integrated pollution index suggested that 72.41% of sampling sites were exposed to low to moderately integrated pollution, and 27.59% of sampling sites were exposed to strongly integrated pollution. According to results for potential ecological risk index, ecological risks of single and all the heavy metals in bed sediment from all the sampling sites were low. Human risks were assessed with hazardous quotients, and the results suggested that exposure of heavy metals to bed sediment posed no or little risk to human health, and the pathway of ingestion significantly contributed to human health risks. Full article
(This article belongs to the Special Issue Environmental Systems Engineering)
Open AccessArticle Abiotic Controls on Macroscale Variations of Humid Tropical Forest Height
Remote Sens. 2016, 8(6), 494; doi:10.3390/rs8060494
Received: 31 March 2016 / Revised: 29 May 2016 / Accepted: 7 June 2016 / Published: 14 June 2016
Cited by 2 | Viewed by 579 | PDF Full-text (8046 KB) | HTML Full-text | XML Full-text | Supplementary Files
Abstract
Spatial variation of tropical forest tree height is a key indicator of ecological processes associated with forest growth and carbon dynamics. Here we examine the macroscale variations of tree height of humid tropical forests across three continents and quantify the climate and edaphic
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Spatial variation of tropical forest tree height is a key indicator of ecological processes associated with forest growth and carbon dynamics. Here we examine the macroscale variations of tree height of humid tropical forests across three continents and quantify the climate and edaphic controls on these variations. Forest tree heights are systematically sampled across global humid tropical forests with more than 2.5 million measurements from Geoscience Laser Altimeter System (GLAS) satellite observations (2004–2008). We used top canopy height (TCH) of GLAS footprints to grid the statistical mean and variance and the 90 percentile height of samples at 0.5 degrees to capture the regional variability of average and large trees globally. We used the spatial regression method (spatial eigenvector mapping-SEVM) to evaluate the contributions of climate, soil and topography in explaining and predicting the regional variations of forest height. Statistical models suggest that climate, soil, topography, and spatial contextual information together can explain more than 60% of the observed forest height variation, while climate and soil jointly explain 30% of the height variations. Soil basics, including physical compositions such as clay and sand contents, chemical properties such as PH values and cation-exchange capacity, as well as biological variables such as the depth of organic matter, all present independent but statistically significant relationships to forest height across three continents. We found significant relations between the precipitation and tree height with shorter trees on the average in areas of higher annual water stress, and large trees occurring in areas with low stress and higher annual precipitation but with significant differences across the continents. Our results confirm other landscape and regional studies by showing that soil fertility, topography and climate may jointly control a significant variation of forest height and influencing patterns of aboveground biomass stocks and dynamics. Other factors such as biotic and disturbance regimes, not included in this study, may have less influence on regional variations but strongly mediate landscape and small-scale forest structure and dynamics. Full article
(This article belongs to the Special Issue Remote Sensing of Vegetation Structure and Dynamics)
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Open AccessArticle The Chaotic-Based Control of Three-Port Isolated Bidirectional DC/DC Converters for Electric and Hybrid Vehicles
Energies 2016, 9(2), 83; doi:10.3390/en9020083
Received: 31 July 2015 / Revised: 10 January 2016 / Accepted: 13 January 2016 / Published: 27 January 2016
Cited by 4 | Viewed by 948 | PDF Full-text (12128 KB) | HTML Full-text | XML Full-text
Abstract
Three-port isolated (TPI) bidirectional DC/DC converters have three energy ports and offer advantages of large voltage gain, galvanic isolation ability and high power density. For this reason this kind of converters are suitable to connect different energy sources and loads in electric and
[...] Read more.
Three-port isolated (TPI) bidirectional DC/DC converters have three energy ports and offer advantages of large voltage gain, galvanic isolation ability and high power density. For this reason this kind of converters are suitable to connect different energy sources and loads in electric and hybrid vehicles. The purpose of this paper is to propose chaotic modulation and the related control scheme for TPI bidirectional DC/DC converters, in such a way that the switching harmonic peaks can be suppressed in spectrum and the conducted electromagnetic interference (EMI) is reduced. Two chaotic modulation strategies, namely the continuously chaotic modulation and the discretely chaotic modulation are presented. These two chaotic modulation strategies are applied for TPI bidirectional DC/DC converters with shifted-phase angle based control and phase-shifted PWM control. Both simulation and experiments are given to verify the validity of the proposed chaotic modulation-based control schemes. Full article
(This article belongs to the Special Issue Advances in Plug-in Hybrid Vehicles and Hybrid Vehicles)
Open AccessArticle miR-134 Modulates the Proliferation of Human Cardiomyocyte Progenitor Cells by Targeting Meis2
Int. J. Mol. Sci. 2015, 16(10), 25199-25213; doi:10.3390/ijms161025199
Received: 18 June 2015 / Revised: 16 September 2015 / Accepted: 25 September 2015 / Published: 23 October 2015
Cited by 2 | Viewed by 1119 | PDF Full-text (2124 KB) | HTML Full-text | XML Full-text | Supplementary Files
Abstract
Cardiomyocyte progenitor cells play essential roles in early heart development, which requires highly controlled cellular organization. microRNAs (miRs) are involved in various cell behaviors by post-transcriptional regulation of target genes. However, the roles of miRNAs in human cardiomyocyte progenitor cells (hCMPCs) remain to
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Cardiomyocyte progenitor cells play essential roles in early heart development, which requires highly controlled cellular organization. microRNAs (miRs) are involved in various cell behaviors by post-transcriptional regulation of target genes. However, the roles of miRNAs in human cardiomyocyte progenitor cells (hCMPCs) remain to be elucidated. Our previous study showed that miR-134 was significantly downregulated in heart tissue suffering from congenital heart disease, underlying the potential role of miR-134 in cardiogenesis. In the present work, we showed that the upregulation of miR-134 reduced the proliferation of hCMPCs, as determined by EdU assay and Ki-67 immunostaining, while the inhibition of miR-134 exhibited an opposite effect. Both up- and downregulation of miR-134 expression altered the transcriptional level of cell-cycle genes. We identified Meis2 as the target of miR-134 in the regulation of hCMPC proliferation through bioinformatic prediction, luciferase reporter assay and western blot. The over-expression of Meis2 mitigated the effect of miR-134 on hCMPC proliferation. Moreover, miR-134 did not change the degree of hCMPC differentiation into cardiomyocytes in our model, suggesting that miR-134 is not required in this process. These findings reveal an essential role for miR-134 in cardiomyocyte progenitor cell biology and provide new insights into the physiology and pathology of cardiogenesis. Full article
(This article belongs to the Special Issue Improvement of Cardiac Function in Heart Failure)
Open AccessReview Roles of Chemokines and Chemokine Receptors in Obesity-Associated Insulin Resistance and Nonalcoholic Fatty Liver Disease
Biomolecules 2015, 5(3), 1563-1579; doi:10.3390/biom5031563
Received: 31 May 2015 / Revised: 6 July 2015 / Accepted: 7 July 2015 / Published: 21 July 2015
Cited by 29 | Viewed by 2489 | PDF Full-text (1394 KB) | HTML Full-text | XML Full-text
Abstract
Abundant evidence has demonstrated that obesity is a state of low-grade chronic inflammation that triggers the release of lipids, aberrant adipokines, pro-inflammatory cytokines, and several chemokines from adipose tissue. This low-grade inflammation underlies the development of insulin resistance and associated metabolic comorbidities such
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Abundant evidence has demonstrated that obesity is a state of low-grade chronic inflammation that triggers the release of lipids, aberrant adipokines, pro-inflammatory cytokines, and several chemokines from adipose tissue. This low-grade inflammation underlies the development of insulin resistance and associated metabolic comorbidities such as type 2 diabetes mellitus (T2DM) and nonalcoholic fatty liver disease (NAFLD). During this development, adipose tissue macrophages accumulate through chemokine (C-C motif) receptor 2 and the ligand for this receptor, monocyte chemoattractant protein-1 (MCP-1), is considered to be pivotal for the development of insulin resistance. To date, the chemokine system is known to be comprised of approximately 40 chemokines and 20 chemokine receptors that belong to the seven-transmembrane G protein-coupled receptor family and, as a result, chemokines appear to exhibit a high degree of functional redundancy. Over the past two decades, the physiological and pathological properties of many of these chemokines and their receptors have been elucidated. The present review highlights chemokines and chemokine receptors as key contributing factors that link obesity to insulin resistance, T2DM, and NAFLD. Full article
(This article belongs to the Special Issue Transcriptional Regulation of Pro-Inflammatory Genes)
Open AccessArticle MiR-25 Protects Cardiomyocytes against Oxidative Damage by Targeting the Mitochondrial Calcium Uniporter
Int. J. Mol. Sci. 2015, 16(3), 5420-5433; doi:10.3390/ijms16035420
Received: 4 January 2015 / Revised: 4 January 2015 / Accepted: 27 February 2015 / Published: 10 March 2015
Cited by 15 | Viewed by 1557 | PDF Full-text (3442 KB) | HTML Full-text | XML Full-text
Abstract
MicroRNAs (miRNAs) are a class of small non-coding RNAs, whose expression levels vary in different cell types and tissues. Emerging evidence indicates that tissue-specific and -enriched miRNAs are closely associated with cellular development and stress responses in their tissues. MiR-25 has been documented
[...] Read more.
MicroRNAs (miRNAs) are a class of small non-coding RNAs, whose expression levels vary in different cell types and tissues. Emerging evidence indicates that tissue-specific and -enriched miRNAs are closely associated with cellular development and stress responses in their tissues. MiR-25 has been documented to be abundant in cardiomyocytes, but its function in the heart remains unknown. Here, we report that miR-25 can protect cardiomyocytes against oxidative damage by down-regulating mitochondrial calcium uniporter (MCU). MiR-25 was markedly elevated in response to oxidative stimulation in cardiomyocytes. Further overexpression of miR-25 protected cardiomyocytes against oxidative damage by inactivating the mitochondrial apoptosis pathway. MCU was identified as a potential target of miR-25 by bioinformatical analysis. MCU mRNA level was reversely correlated with miR-25 under the exposure of H2O2, and MCU protein level was largely decreased by miR-25 overexpression. The luciferase reporter assay confirmed that miR-25 bound directly to the 3' untranslated region (UTR) of MCU mRNA. MiR-25 significantly decreased H2O2-induced elevation of mitochondrial Ca2+ concentration, which is likely to be the result of decreased activity of MCU. We conclude that miR-25 targets MCU to protect cardiomyocytes against oxidative damages. This finding provides novel insights into the involvement of miRNAs in oxidative stress in cardiomyocytes. Full article
(This article belongs to the Special Issue Pathogenesis of Cardiac Arrhythmias and Heart Failure)
Open AccessArticle Nonlinearity Analysis and Parameters Optimization for an Inductive Angle Sensor
Sensors 2014, 14(3), 4111-4125; doi:10.3390/s140304111
Received: 13 December 2013 / Revised: 13 February 2014 / Accepted: 14 February 2014 / Published: 28 February 2014
Cited by 2 | Viewed by 1575 | PDF Full-text (1088 KB) | HTML Full-text | XML Full-text
Abstract
Using the finite element method (FEM) and particle swarm optimization (PSO), a nonlinearity analysis based on parameter optimization is proposed to design an inductive angle sensor. Due to the structure complexity of the sensor, understanding the influences of structure parameters on the nonlinearity
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Using the finite element method (FEM) and particle swarm optimization (PSO), a nonlinearity analysis based on parameter optimization is proposed to design an inductive angle sensor. Due to the structure complexity of the sensor, understanding the influences of structure parameters on the nonlinearity errors is a critical step in designing an effective sensor. Key parameters are selected for the design based on the parameters’ effects on the nonlinearity errors. The finite element method and particle swarm optimization are combined for the sensor design to get the minimal nonlinearity error. In the simulation, the nonlinearity error of the optimized sensor is 0.053% in the angle range from −60° to 60°. A prototype sensor is manufactured and measured experimentally, and the experimental nonlinearity error is 0.081% in the angle range from −60° to 60°. Full article
(This article belongs to the Section Physical Sensors)
Open AccessArticle Characterization of the Pinus massoniana Transcriptional Response to Bursaphelenchus xylophilus Infection Using Suppression Subtractive Hybridization
Int. J. Mol. Sci. 2013, 14(6), 11356-11375; doi:10.3390/ijms140611356
Received: 8 March 2013 / Revised: 3 May 2013 / Accepted: 14 May 2013 / Published: 28 May 2013
Cited by 7 | Viewed by 2411 | PDF Full-text (269 KB) | HTML Full-text | XML Full-text | Supplementary Files
Abstract
Pine wilt disease (PWD) caused by pine wood nematode (PWN), Bursaphelenchus xylophilus, is the most destructive diseases of pine and poses a threat of serious economic losses worldwide. Although several of the mechanisms involved in disease progression have been discovered, the molecular
[...] Read more.
Pine wilt disease (PWD) caused by pine wood nematode (PWN), Bursaphelenchus xylophilus, is the most destructive diseases of pine and poses a threat of serious economic losses worldwide. Although several of the mechanisms involved in disease progression have been discovered, the molecular response of Pinus massoniana to PWN infection has not been explored. We constructed four subtractive suppression hybridization cDNA libraries by taking time-course samples from PWN-inoculated Masson pine trees. One-hundred forty-four significantly differentially expressed sequence tags (ESTs) were identified, and 124 high-quality sequences with transcriptional features were selected for gene ontology (GO) and individual gene analyses. There were marked differences in the types of transcripts, as well as in the timing and levels of transcript expression in the pine trees following PWN inoculation. Genes involved in signal transduction, transcription and translation and secondary metabolism were highly expressed after 24 h and 72 h, while stress response genes were highly expressed only after 72 h. Certain transcripts responding to PWN infection were discriminative; pathogenesis and cell wall-related genes were more abundant, while detoxification or redox process-related genes were less abundant. This study provides new insights into the molecular mechanisms that control the biochemical and physiological responses of pine trees to PWN infection, particularly during the initial stage of infection. Full article
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Open AccessArticle Divergent Arctic-Boreal Vegetation Changes between North America and Eurasia over the Past 30 Years
Remote Sens. 2013, 5(5), 2093-2112; doi:10.3390/rs5052093
Received: 1 March 2013 / Revised: 24 April 2013 / Accepted: 24 April 2013 / Published: 2 May 2013
Cited by 25 | Viewed by 2624 | PDF Full-text (2833 KB) | HTML Full-text | XML Full-text
Abstract
Arctic-Boreal region—mainly consisting of tundra, shrub lands, and boreal forests—has been experiencing an amplified warming over the past 30 years. As the main driving force of vegetation growth in the north, temperature exhibits tight coupling with the Normalized Difference Vegetation Index (NDVI)—a proxy
[...] Read more.
Arctic-Boreal region—mainly consisting of tundra, shrub lands, and boreal forests—has been experiencing an amplified warming over the past 30 years. As the main driving force of vegetation growth in the north, temperature exhibits tight coupling with the Normalized Difference Vegetation Index (NDVI)—a proxy to photosynthetic activity. However, the comparison between North America (NA) and northern Eurasia (EA) shows a weakened spatial dependency of vegetation growth on temperature changes in NA during the past decade. If this relationship holds over time, it suggests a 2/3 decrease in vegetation growth under the same rate of warming in NA, while the vegetation response in EA stays the same. This divergence accompanies a circumpolar widespread greening trend, but 20 times more browning in the Boreal NA compared to EA, and comparative greening and browning trends in the Arctic. These observed spatial patterns of NDVI are consistent with the temperature record, except in the Arctic NA, where vegetation exhibits a similar long-term trend of greening to EA under less warming. This unusual growth pattern in Arctic NA could be due to a lack of precipitation velocity compared to the temperature velocity, when taking velocity as a measure of northward migration of climatic conditions. Full article
(This article belongs to the Special Issue Monitoring Global Vegetation with AVHRR NDVI3g Data (1981-2011))
Open AccessArticle Global Data Sets of Vegetation Leaf Area Index (LAI)3g and Fraction of Photosynthetically Active Radiation (FPAR)3g Derived from Global Inventory Modeling and Mapping Studies (GIMMS) Normalized Difference Vegetation Index (NDVI3g) for the Period 1981 to 2011
Remote Sens. 2013, 5(2), 927-948; doi:10.3390/rs5020927
Received: 28 December 2012 / Revised: 7 February 2013 / Accepted: 16 February 2013 / Published: 22 February 2013
Cited by 176 | Viewed by 9109 | PDF Full-text (1479 KB) | HTML Full-text | XML Full-text | Supplementary Files
Abstract
Long-term global data sets of vegetation Leaf Area Index (LAI) and Fraction of Photosynthetically Active Radiation absorbed by vegetation (FPAR) are critical to monitoring global vegetation dynamics and for modeling exchanges of energy, mass and momentum between the land surface and planetary boundary
[...] Read more.
Long-term global data sets of vegetation Leaf Area Index (LAI) and Fraction of Photosynthetically Active Radiation absorbed by vegetation (FPAR) are critical to monitoring global vegetation dynamics and for modeling exchanges of energy, mass and momentum between the land surface and planetary boundary layer. LAI and FPAR are also state variables in hydrological, ecological, biogeochemical and crop-yield models. The generation, evaluation and an example case study documenting the utility of 30-year long data sets of LAI and FPAR are described in this article. A neural network algorithm was first developed between the new improved third generation Global Inventory Modeling and Mapping Studies (GIMMS) Normalized Difference Vegetation Index (NDVI3g) and best-quality Terra Moderate Resolution Imaging Spectroradiometer (MODIS) LAI and FPAR products for the overlapping period 2000–2009. The trained neural network algorithm was then used to generate corresponding LAI3g and FPAR3g data sets with the following attributes: 15-day temporal frequency, 1/12 degree spatial resolution and temporal span of July 1981 to December 2011. The quality of these data sets for scientific research in other disciplines was assessed through (a) comparisons with field measurements scaled to the spatial resolution of the data products, (b) comparisons with broadly-used existing alternate satellite data-based products, (c) comparisons to plant growth limiting climatic variables in the northern latitudes and tropical regions, and (d) correlations of dominant modes of interannual variability with large-scale circulation anomalies such as the EI Niño-Southern Oscillation and Arctic Oscillation. These assessment efforts yielded results that attested to the suitability of these data sets for research use in other disciplines. The utility of these data sets is documented by comparing the seasonal profiles of LAI3g with profiles from 18 state-of-the-art Earth System Models: the models consistently overestimated the satellite-based estimates of leaf area and simulated delayed peak seasonal values in the northern latitudes, a result that is consistent with previous evaluations of similar models with ground-based data. The LAI3g and FPAR3g data sets can be obtained freely from the NASA Earth Exchange (NEX) website. Full article
(This article belongs to the Special Issue Monitoring Global Vegetation with AVHRR NDVI3g Data (1981-2011))
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Open AccessArticle Medium Optimization for Exopolysaccharide Production in Liquid Culture of Endophytic Fungus Berkleasmium sp. Dzf12
Int. J. Mol. Sci. 2012, 13(9), 11411-11426; doi:10.3390/ijms130911411
Received: 1 August 2012 / Revised: 24 August 2012 / Accepted: 27 August 2012 / Published: 12 September 2012
Cited by 6 | Viewed by 1997 | PDF Full-text (452 KB) | HTML Full-text | XML Full-text
Abstract
Berkleasmium sp. Dzf12, an endophytic fungus from Dioscorea zingiberensis, is a high producer of spirobisnaphthalenes with various bioactivities. The exopolysaccharide (EPS) produced by this fungus also shows excellent antioxidant activity. In this study, the experimental designs based on statistics were employed to
[...] Read more.
Berkleasmium sp. Dzf12, an endophytic fungus from Dioscorea zingiberensis, is a high producer of spirobisnaphthalenes with various bioactivities. The exopolysaccharide (EPS) produced by this fungus also shows excellent antioxidant activity. In this study, the experimental designs based on statistics were employed to evaluate and optimize the medium for EPS production in liquid culture of Berkleasmium sp. Dzf12. For increasing EPS yield, the concentrations of glucose, peptone, KH2PO4, MgSO4∙7H2O and FeSO4∙7H2O in medium were optimized using response surface methodology (RSM). Both the fractional factorial design (FFD) and central composite design (CCD) were applied to optimize the main factors which significantly affected EPS production. The concentrations of glucose, peptone and MgSO4∙7H2O were found to be the main effective factors for EPS production by FFD experimental analysis. Based on the further CCD optimization and RSM analysis, a quadratic polynomial regression equation was derived from the EPS yield and three variables. Statistical analysis showed the polynomial regression model was in good agreement with the experimental results with the determination coefficient (adj-R2) as 0.9434. By solving the quadratic regression equation, the optimal concentrations of glucose, peptone and MgSO4∙7H2O for EPS production were determined as 63.80, 20.76 and 2.74 g/L, respectively. Under the optimum conditions, the predicted EPS yield reached the maximum (13.22 g/L). Verification experiment confirmed the validity with the actual EPS yield as 13.97 g/L, which was 6.29-fold in comparison with that (2.22 g/L) in the original basal medium. The results provide the support data for EPS production in large scale and also speed up the application of Berkleasmium sp. Dzf12. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)

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