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Authors = Jia Song ORCID = 0000-0003-4392-0694

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Open AccessArticle Tdrd12 Is Essential for Germ Cell Development and Maintenance in Zebrafish
Int. J. Mol. Sci. 2017, 18(6), 1127; doi:10.3390/ijms18061127
Received: 14 February 2017 / Revised: 20 April 2017 / Accepted: 18 May 2017 / Published: 7 June 2017
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Abstract
The regularity of Piwi-interacting RNA (piRNA) biogenesis is crucial to germline development. Functioning as Piwi-interacting proteins, Tudor domain-related proteins (Tdrds) have been demonstrated to be involved in spermatogenesis and the piRNA pathway. In this study, zebrafish tdrd12 was identified, and the maternal and
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The regularity of Piwi-interacting RNA (piRNA) biogenesis is crucial to germline development. Functioning as Piwi-interacting proteins, Tudor domain-related proteins (Tdrds) have been demonstrated to be involved in spermatogenesis and the piRNA pathway. In this study, zebrafish tdrd12 was identified, and the maternal and germ cell-specific expression patterns of zebrafish tdrd12 were observed. Utilizing TALEN (transcription activator-like effector nuclease) techniques, two independent tdrd12 mutant zebrafish lines were generated. Although no defects were found during the generation of the primordial germ cells (PGCs) in the tdrd12-null fish progenies obtained from the heterozygous tdrd12 mutant parents, all Tdrd12-deficient fish developed into infertile males. The reduced numbers and eventually loss of the germ cells by 35 days post fertilization (dpf) led to masculinization and infertility of the Tdrd12-deficient fish. Meiosis defects of the germ cells in the tdrd12 mutants during the gonad-transitioning period were observed, revealing the indispensable functions of Tdrd12 in gametogenesis. Our studies demonstrated that zebrafish Tdrd12 is essential for germ cell development and maintenance. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
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Open AccessArticle Learning to Diagnose Cirrhosis with Liver Capsule Guided Ultrasound Image Classification
Sensors 2017, 17(1), 149; doi:10.3390/s17010149
Received: 20 November 2016 / Revised: 27 December 2016 / Accepted: 10 January 2017 / Published: 13 January 2017
Cited by 1 | Viewed by 612 | PDF Full-text (2911 KB) | HTML Full-text | XML Full-text
Abstract
This paper proposes a computer-aided cirrhosis diagnosis system to diagnose cirrhosis based on ultrasound images. We first propose a method to extract a liver capsule on an ultrasound image, then, based on the extracted liver capsule, we fine-tune a deep convolutional neural network
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This paper proposes a computer-aided cirrhosis diagnosis system to diagnose cirrhosis based on ultrasound images. We first propose a method to extract a liver capsule on an ultrasound image, then, based on the extracted liver capsule, we fine-tune a deep convolutional neural network (CNN) model to extract features from the image patches cropped around the liver capsules. Finally, a trained support vector machine (SVM) classifier is applied to classify the sample into normal or abnormal cases. Experimental results show that the proposed method can effectively extract the liver capsules and accurately classify the ultrasound images. Full article
(This article belongs to the Section Physical Sensors)
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Open AccessArticle A Novel Evaluation Approach for Line Simplification Algorithms towards Vector Map Visualization
ISPRS Int. J. Geo-Inf. 2016, 5(12), 223; doi:10.3390/ijgi5120223
Received: 17 August 2016 / Revised: 11 November 2016 / Accepted: 16 November 2016 / Published: 29 November 2016
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Abstract
Line simplification is an important method in the context of cartographic generalization, which is helpful for improving the visualization of digital vector maps. The evaluation method for the simplification algorithms is still an open issue when facing applications of vector data, including progressive
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Line simplification is an important method in the context of cartographic generalization, which is helpful for improving the visualization of digital vector maps. The evaluation method for the simplification algorithms is still an open issue when facing applications of vector data, including progressive transmission, web mapping, and so on. This paper proposes a novel evaluation approach for line simplification algorithms based on several factors towards vector map visualization, including the features of displays, map scales, and the ability of the human eye to distinguish pixels. In order to ensure the evaluation of the line simplification algorithms is conducted under the consistent strength of simplification, a measurement approach for the difference between an original line and its simplified one is proposed in this study, and the method of solving the appropriate simplification threshold is presented. With this method, four simplification algorithms are evaluated at five map scales using three evaluation indicators: standard deviation, compression ratio, and simplification time. The experiment and results show the evaluation approach in this study is feasible, and represents a good means in which to facilitate the application of line simplification towards progressive transmission and visualization of vector maps. Full article
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Open AccessArticle The Effect of Vegan Protein-Based Diets on Metabolic Parameters, Expressions of Adiponectin and Its Receptors in Wistar Rats
Nutrients 2016, 8(10), 643; doi:10.3390/nu8100643
Received: 29 August 2016 / Revised: 1 October 2016 / Accepted: 11 October 2016 / Published: 18 October 2016
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Abstract
Vegan protein-based diet has attracted increasing interest in the prevention of metabolic syndrome (MetS). Meanwhile, adiponectin has become a highly potential molecular target in the prevention of MetS. Our study will identify a potential vegan protein diet for the prevention of MetS using
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Vegan protein-based diet has attracted increasing interest in the prevention of metabolic syndrome (MetS). Meanwhile, adiponectin has become a highly potential molecular target in the prevention of MetS. Our study will identify a potential vegan protein diet for the prevention of MetS using rat models. Thirty-six Wistar rats were randomly assigned into three groups and given diets containing one of the following proteins for 12 weeks: casein (CAS, control diet), soy protein (SOY), and gluten-soy mixed protein (GSM). Changes in metabolic parameters as well as the expressions of adiponectin and its receptors were identified. Compared to CAS diet, both SOY and GSM diets led to decreases in blood total cholesterol and triglycerides, but only GSM diet led to an increase in HDL-cholesterol; no marked difference was observed in blood glucose in all three groups; HOMA-IR was found lower only in SOY group. Among groups, the order of serum adiponectin level was found as GSM > SOY > CAS. Similar order pattern was also observed in expression of adiponectin in adipose tissue and AdipoR1 mRNA in skeletal muscle. Our results suggested for the first time that, besides SOY diet, GSM diet could also be a possible substitute of animal protein to prevent MetS. Full article
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Open AccessArticle Detection of Prohibited Fish Drugs Using Silver Nanowires as Substrate for Surface-Enhanced Raman Scattering
Nanomaterials 2016, 6(9), 175; doi:10.3390/nano6090175
Received: 6 July 2016 / Revised: 22 August 2016 / Accepted: 9 September 2016 / Published: 21 September 2016
Cited by 1 | Viewed by 730 | PDF Full-text (2434 KB) | HTML Full-text | XML Full-text
Abstract
Surface-enhanced Raman scattering or surface-enhanced Raman spectroscopy (SERS) is a promising detection technology, and has captured increasing attention. Silver nanowires were synthesized using a rapid polyol method and optimized through adjustment of the molar ratio of poly(vinyl pyrrolidone) and silver nitrate in a
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Surface-enhanced Raman scattering or surface-enhanced Raman spectroscopy (SERS) is a promising detection technology, and has captured increasing attention. Silver nanowires were synthesized using a rapid polyol method and optimized through adjustment of the molar ratio of poly(vinyl pyrrolidone) and silver nitrate in a glycerol system. Ultraviolet-visible spectrometry, X-ray diffraction, and transmission electron microscopy were used to characterize the silver nanowires. The optimal silver nanowires were used as a SERS substrate to detect prohibited fish drugs, including malachite green, crystal violet, furazolidone, and chloramphenicol. The SERS spectra of crystal violet could be clearly identified at concentrations as low as 0.01 ng/mL. The minimum detectable concentration for malachite green was 0.05 ng/mL, and for both furazolidone and chloramphenicol were 0.1 μg/mL. The results showed that the as-prepared Ag nanowires SERS substrate exhibits high sensitivity and activity. Full article
(This article belongs to the Special Issue Nanomaterials in Food Safety)
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Open AccessArticle A Moderate Low-Carbohydrate Low-Calorie Diet Improves Lipid Profile, Insulin Sensitivity and Adiponectin Expression in Rats
Nutrients 2015, 7(6), 4724-4738; doi:10.3390/nu7064724
Received: 27 April 2015 / Revised: 24 May 2015 / Accepted: 2 June 2015 / Published: 11 June 2015
Cited by 7 | Viewed by 2083 | PDF Full-text (314 KB) | HTML Full-text | XML Full-text
Abstract
Calorie restriction (CR) via manipulating dietary carbohydrates has attracted increasing interest in the prevention and treatment of metabolic syndrome. There is little consensus about the extent of carbohydrate restriction to elicit optimal results in controlling metabolic parameters. Our study will identify a better
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Calorie restriction (CR) via manipulating dietary carbohydrates has attracted increasing interest in the prevention and treatment of metabolic syndrome. There is little consensus about the extent of carbohydrate restriction to elicit optimal results in controlling metabolic parameters. Our study will identify a better carbohydrate-restricted diet using rat models. Rats were fed with one of the following diets for 12 weeks: Control diet, 80% energy (34% carbohydrate-reduced) and 60% energy (68% carbohydrate-reduced) of the control diet. Changes in metabolic parameters and expressions of adiponectin and peroxisome proliferator activator receptor γ (PPARγ) were identified. Compared to the control diet, 68% carbohydrate-reduced diet led to a decrease in serum triglyceride and increases inlow density lipoprotein-cholesterol (LDL-C), high density lipoprotein-cholesterol (HDL-C) and total cholesterol; a 34% carbohydrate-reduced diet resulted in a decrease in triglycerides and an increase in HDL-cholesterol, no changes however, were shown in LDL-cholesterol and total cholesterol; reductions in HOMA-IR were observed in both CR groups. Gene expressions of adiponectin and PPARγ in adipose tissues were found proportionally elevated with an increased degree of energy restriction. Our study for the first time ever identified that a moderate-carbohydrate restricted diet is not only effective in raising gene expressions of adiponectin and PPARγ which potentially lead to better metabolic conditions but is better at improving lipid profiles than a low-carbohydrate diet in rats. Full article
(This article belongs to the Special Issue Diet and Metabolic Dysfunction) Printed Edition available

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