Leaf area index (LAI) and fraction of photosynthetically active radiation (FPAR) absorbed by vegetation are key variables in many global models of climate, hydrology, biogeochemistry, and ecology. These parameters are being operationally produced from Terra and Aqua MODIS bidirectional reflectance factor (BRF) data. The MODIS science team has developed, and plans to release, a new version of the BRF product using the multi-angle implementation of atmospheric correction (MAIAC) algorithm from Terra and Aqua MODIS observations. This paper presents analyses of LAI and FPAR retrievals generated with the MODIS LAI/FPAR operational algorithm using Terra MAIAC BRF data. Direct application of the operational algorithm to MAIAC BRF resulted in an underestimation of the MODIS Collection 6 (C6) LAI standard product by up to 10%. The difference was attributed to the disagreement between MAIAC and MODIS BRFs over the vegetation by −2% to +8% in the red spectral band, suggesting different accuracies in the BRF products. The operational LAI/FPAR algorithm was adjusted for uncertainties in the MAIAC BRF data. Its performance evaluated on a limited set of MAIAC BRF data from North and South America suggests an increase in spatial coverage of the best quality, high-precision LAI retrievals of up to 10%. Overall MAIAC LAI and FPAR are consistent with the standard C6 MODIS LAI/FPAR. The increase in spatial coverage of the best quality LAI retrievals resulted in a better agreement of MAIAC LAI with field data compared to the C6 LAI product, with the RMSE decreasing from 0.80 LAI units (C6) down to 0.67 (MAIAC) and the R² increasing from 0.69 to 0.80. The slope (intercept) of the satellite-derived vs. field-measured LAI regression line has changed from 0.89 (0.39) to 0.97 (0.25). Full article

Although quantifying the massive exchange of carbon that takes place over the Amazon Basin remains a challenge, progress is being made as the remote sensing community moves from using traditional, reflectance-based vegetation indices, such as the Normalized Difference Vegetation Index (NDVI), to the more functional Photochemical Reflectance Index (PRI). This new index, together with satellite-derived estimates of canopy light interception and Sun-Induced Fluorescence (SIF), provide improved estimates of Gross Primary Production (GPP). This paper traces the development of these new approaches, compares the results of their analyses from multiple years of data acquired across the Amazon Basin and suggests further improvements in instrument design, data acquisition and processing. We demonstrated that our estimates of PRI are in generally good agreement with eddy-flux tower measurements of photosynthetic light use efficiency (ε) at four sites in the Amazon Basin: r² values ranged from 0.37 to 0.51 for northern flux sites and to 0.78 for southern flux sites. This is a significant advance over previous approaches seeking to establish a link between global-scale photosynthetic activity and remotely-sensed data. When combined with measurements of Sun-Induced Fluorescence (SIF), PRI provides realistic estimates of seasonal variation in photosynthesis over the Amazon that relate well to the wet and dry seasons. We anticipate that our findings will steer the development of improved approaches to estimate photosynthetic activity over the tropics. Full article

Long-term observations of vegetation phenology can be used to monitor the response of terrestrial ecosystems to climate change. Satellite remote sensing provides the most efficient means to observe phenological events through time series analysis of vegetation indices such as the Normalized Difference Vegetation Index (NDVI). This study investigates the potential of a Photochemical Reflectance Index (PRI), which has been linked to vegetation light use efficiency, to improve the accuracy of MODIS-based estimates of phenology in an evergreen conifer forest. Timings of the start and end of the growing season (SGS and EGS) were derived from a 13-year-long time series of PRI and NDVI based on a MAIAC (multi-angle implementation of atmospheric correction) processed MODIS dataset and standard MODIS NDVI product data. The derived dates were validated with phenology estimates from ground-based flux tower measurements of ecosystem productivity. Significant correlations were found between the MAIAC time series and ground-estimated SGS (R² = 0.36–0.8), which is remarkable since previous studies have found it difficult to observe inter-annual phenological variations in evergreen vegetation from satellite data. The considerably noisier NDVI product could not accurately predict SGS, and EGS could not be derived successfully from any of the time series. While the strongest relationship overall was found between SGS derived from the ground data and PRI, MAIAC NDVI exhibited high correlations with SGS more consistently (R² > 0.6 in all cases). The results suggest that PRI can serve as an effective indicator of spring seasonal transitions, however, additional work is necessary to confirm the relationships observed and to further explore the usefulness of MODIS PRI for detecting phenology. Full article

Amazon forests experienced two severe droughts at the beginning of the 21st century: one in 2005 and the other in 2010. How Amazon forests responded to these droughts is critical for the future of the Earth’s climate system. It is only possible to assess Amazon forests’ response to the droughts in large areal extent through satellite remote sensing. Here, we used the Multi-Angle Implementation of Atmospheric Correction (MAIAC) Moderate Resolution Imaging Spectroradiometer (MODIS) vegetation index (VI) data to assess Amazon forests’ response to droughts, and compared the results with those from the standard (Collection 5 and Collection 6) MODIS VI data. Overall, the MAIAC data reveal more realistic Amazon forests inter-annual greenness dynamics than the standard MODIS data. Our results from the MAIAC data suggest that: (1) the droughts decreased the greenness (i.e., photosynthetic activity) of Amazon forests; (2) the Amazon wet season precipitation reduction induced by El Niño events could also lead to reduced photosynthetic activity of Amazon forests; and (3) in the subsequent year after the water stresses, the greenness of Amazon forests recovered from the preceding decreases. However, as previous research shows droughts cause Amazon forests to reduce investment in tissue maintenance and defense, it is not clear whether the photosynthesis of Amazon forests will continue to recover after future water stresses, because of the accumulated damages caused by the droughts. Full article