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  <front>
    <journal-meta>
      <journal-id journal-id-type="publisher-id">viruses</journal-id>
      <journal-title>Viruses</journal-title>
      <abbrev-journal-title abbrev-type="publisher">Viruses</abbrev-journal-title>
      <abbrev-journal-title abbrev-type="pubmed">Viruses</abbrev-journal-title>
      <issn pub-type="epub">1999-4915</issn>
      <publisher>
        <publisher-name>MDPI</publisher-name>
      </publisher>
    </journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.3390/v4112650</article-id>
      <article-id pub-id-type="publisher-id">viruses-04-02650</article-id>
      <article-categories>
        <subj-group>
          <subject>Review</subject>
        </subj-group>
      </article-categories>
      <title-group>
        <article-title>Role of Lymphocytic Choriomeningitis Virus (LCMV) in Understanding Viral Immunology: Past, Present and Future</article-title>
      </title-group>
      
      <contrib-group>
        <contrib contrib-type="author">
          <name>
            <surname>Zhou</surname>
            <given-names>Xin</given-names>
          </name>
          <xref rid="af1-viruses-04-02650" ref-type="aff">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <name>
            <surname>Ramachandran</surname>
            <given-names>Srividya</given-names>
          </name>
          <xref rid="af1-viruses-04-02650" ref-type="aff">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <name>
            <surname>Mann</surname>
            <given-names>Margaret</given-names>
          </name>
          <xref rid="af1-viruses-04-02650" ref-type="aff">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <name>
            <surname>Popkin</surname>
            <given-names>Daniel L.</given-names>
          </name>
          <xref rid="af2-viruses-04-02650" ref-type="aff">2</xref>
          <xref rid="c1-viruses-04-02650" ref-type="corresp">*</xref>
        </contrib>
      </contrib-group>
    <aff id="af1-viruses-04-02650"><label>1 </label>Department of Dermatology, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA; Email: <email>xin.zhou@case.edu</email> (X.Z.); <email>sxr476@case.edu</email> (S.R.); <email>margaret.mann@gmail.com</email> (M.M.)</aff>
      <aff id="af2-viruses-04-02650"><label>2 </label>Department of Dermatology, Pathology, Microbiology &amp; Molecular Biology, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106, USA</aff>
      <author-notes>
        <corresp id="c1-viruses-04-02650"><label>*</label> Author  to whom correspondence should be addressed; Email: <email>daniel.popkin@case.edu</email>; Tel.: +1-216-368-0237; Fax: +1-216-844-8993.</corresp>
      </author-notes>
      <pub-date pub-type="epub">
        <day>29</day>
        <month>10</month>
        <year>2012</year>
      </pub-date>
      <pub-date pub-type="collection"><month>11</month>
        <year>2012</year>
      </pub-date>
      <volume>4</volume>
      <issue>11</issue>
      <fpage>2650</fpage>
      <lpage>2669</lpage>
      <history>
        <date date-type="received">
          <day>30</day>
          <month>09</month>
          <year>2012</year>
        </date>
        <date date-type="rev-recd">
          <day>18</day>
          <month>10</month>
          <year>2012</year>
        </date>
        <date date-type="accepted">
          <day>24</day>
          <month>10</month>
          <year>2012</year>
        </date>
      </history>
      <permissions>
        <copyright-statement>©  2012 by the authors; licensee MDPI, Basel, Switzerland.</copyright-statement>
        <copyright-year>2012</copyright-year>
        <license xmlns:xlink="http://www.w3.org/1999/xlink" license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/">
          <p>This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).</p>
        </license>
      </permissions>
      <abstract>
        <p>Lymphocytic choriomeningitis virus (LCMV) is a common infection of rodents first identified over eighty years ago in St. Louis, MO, U.S.A. It is best known for its application in immunological studies. The history of LCMV closely correlates with the development of modern immunology. With the use of LCMV as a model pathogen several key concepts have emerged: Major Histocompatibility Complex (MHC) restriction, T cell memory, persistent infections, T cell exhaustion and the key role of immune pathology in disease. Given the phenomenal infrastructure within this field (e.g., defined immunodominant and subdominant epitopes to all T cell receptor specificities as well as the cognate tetramers for enumeration <italic>in vivo</italic>) the study of LCMV remains an active and productive platform for biological research across the globe to this day. Here we present a historical primer that highlights several breakthroughs since the discovery of LCMV. Next, we highlight current research in the field and conclude with our predictions for future directions in the remarkable field of LCMV research.</p>
      </abstract>
      <kwd-group>
        <kwd>lymphocytic choriomeningitis virus</kwd>
        <kwd>immunology</kwd>
        <kwd>viral immunology</kwd>
        <kwd>immune memory</kwd>
        <kwd>persistent infection</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec sec-type="intro">
      <title>1. Introduction</title>
      <p>Both innate and adaptive immune systems have evolved to protect the host from pathogens. By studying pathogens and how they interact with the host, many fundamental concepts of the immune system have been elucidated. In this review we will discuss how studies with lymphocytic choriomeningitis virus (LCMV), a natural pathogen of mice, contributed toward our understanding of immunology. Key concepts such as persistent viral infection, MHC restriction, and T cell exhaustion were discovered from the study of LCMV. This review will cover the origin of LCMV and highlight significant milestones along its history up to present day with a focus on fundamental discoveries pertaining to immunology and viral pathogenesis (summarized in <xref ref-type="fig" rid="viruses-04-02650-f001">Figure 1</xref>, a graphical outline of this review). Then, we will speculate on the future of LCMV research given its rich history towards understanding viral immunology. </p>
      <fig id="viruses-04-02650-f001" position="anchor">
        <label>Figure 1</label>
        <caption>
          <p>Tree of knowledge as disseminated by the lymphocytic choriomeningitis virus (LCMV) model system. This tree depicts a partial history of significant research milestones with the LCMV model system. The conceptual and/or experimental relationship between different discoveries is represented by uni-directional arrows. Green font is used to represent the first part of this review, concepts in persistent viral infection. Purple is used to highlight the second section, T cell immunity. Blue is used to represent the third section, innate immunity. Lastly, red represents the fourth and final section of immune dysfunction. Of note, certain scientific ideas (e.g., “T cell exhaustion”) are conceptually and experimentally derived from multiple lines of research and thus relevant to multiple sections of this review and our understanding of viral immunology. However, for simplicity they are represented by a single color.</p>
        </caption>
        <graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="viruses-04-02650-g001.tif"/>
      </fig>
    </sec>
    <sec>
      <title>2. Early Approaches towards Understanding Persistent Infection and Its Immune Response</title>
      <p>Lymphocytic Choriomeningitis Virus (LCMV) was isolated serendipitously by Charles Armstrong when he studied epidemic encephalitis in St. Louis in 1933 [<xref ref-type="bibr" rid="B1-viruses-04-02650">1</xref>,<xref ref-type="bibr" rid="B2-viruses-04-02650">2</xref>]. While trying to determine the virus responsible for this epidemic, Armstrong isolated LCMV, which he named secondary to host lymphocytosis and inflammation in the meninges lining the brain (including the choroid plexus lining the intracerebral ventricles) and spinal cord. Interestingly, LCMV was uncovered as it is a common pathogen in the house mouse and thus was present in the field. Ultimately, the infectious etiology of the St. Louis encephalitis epidemic was the flavivirus St. Louis encephalitis virus [<xref ref-type="bibr" rid="B3-viruses-04-02650">3</xref>]. Although Armstrong was credited with the discovery of LCMV, other investigators also studied this virus early in its modern history. Traub and Rivers [<xref ref-type="bibr" rid="B4-viruses-04-02650">4</xref>,<xref ref-type="bibr" rid="B5-viruses-04-02650">5</xref>,<xref ref-type="bibr" rid="B6-viruses-04-02650">6</xref>,<xref ref-type="bibr" rid="B7-viruses-04-02650">7</xref>] published studies with LCMV in mouse and human in 1936 making observations towards both the virus and the immune response. </p>
      <p>One such topic was the observation of persistent <italic>versus</italic> acute viral infections. Previously, it was thought that a virally infected host either succumbed to the infection or cleared the infection within a short period of time. In contrast, Traub in 1936 found that mice infected with LCMV in utero or shortly after birth neither die nor eliminate the virus [<xref ref-type="bibr" rid="B5-viruses-04-02650">5</xref>]. Burnet and Fenner proposed that these newborn mice were persistently infected with LCMV because they were “immunologically tolerant”. By virtue of being born from an infected environment (<italic>i.e.</italic>, the mother) [<xref ref-type="bibr" rid="B8-viruses-04-02650">8</xref>], the newborn’s immune system was “tolerant” towards the virus and regarded it as “self” as opposed to a “non-self” pathogen. Supporting this idea, antibodies to LCMV virus were not detected in these persistently infected mice [<xref ref-type="bibr" rid="B9-viruses-04-02650">9</xref>]. </p>
      <p>However, the beginning of many striking turns in the history of LCMV occurred shortly thereafter. With the advent of more sensitive radio immune techniques, Oldstone and Dixon were able to detect low levels of antibody in complex with LCMV in the kidney [<xref ref-type="bibr" rid="B10-viruses-04-02650">10</xref>,<xref ref-type="bibr" rid="B11-viruses-04-02650">11</xref>]. Therefore, an immune response was present. The absence of circulating antibodies was due to its accumulation as immune complexes in the glomeruli [<xref ref-type="bibr" rid="B10-viruses-04-02650">10</xref>,<xref ref-type="bibr" rid="B12-viruses-04-02650">12</xref>]. These findings were challenged when it was appreciated that an immune response as measured by antibody production was dependent on both the strain of mouse and virus [<xref ref-type="bibr" rid="B13-viruses-04-02650">13</xref>,<xref ref-type="bibr" rid="B14-viruses-04-02650">14</xref>,<xref ref-type="bibr" rid="B15-viruses-04-02650">15</xref>,<xref ref-type="bibr" rid="B16-viruses-04-02650">16</xref>,<xref ref-type="bibr" rid="B17-viruses-04-02650">17</xref>,<xref ref-type="bibr" rid="B18-viruses-04-02650">18</xref>,<xref ref-type="bibr" rid="B19-viruses-04-02650">19</xref>].</p>
      <p>In particular, this strain dependence was first uncovered when Volkert <italic>et al.</italic> observed a different result from Oldstone &amp; Dixon in 1975. This group could not detect any antibodies in the peripheral blood nor the glomeruli in AKR mice infected by LCMV-Traub, using either ordinary serological methods or immunofluorescence techniques [<xref ref-type="bibr" rid="B20-viruses-04-02650">20</xref>]. Oldstone <italic>et al.</italic> then directly addressed this possibility of strain dependence by infecting several different lines of mice: SWR/J, CBA/H WEHI, BALB/H WEHI as well as their hybrid offspring. They found that the SWR host had the strongest antibody response and BALB had the weakest antibody response. During this process, they found that C1q bound complexes, which were correlated with the production of antibodies, was controlled by the H-2 (or histocompatibility) complex, another example of the intimate connection between viral pathogenesis and immunology during the study of LCMV [<xref ref-type="bibr" rid="B21-viruses-04-02650">21</xref>,<xref ref-type="bibr" rid="B22-viruses-04-02650">22</xref>]. Furthermore, in 1991 this same group confirmed that virus strain also plays a role by demonstrating that the antibody response of SWR/J mice infected with LCMV Armstrong is 5–10 times higher than when these same mice were infected with LCMV Traub [<xref ref-type="bibr" rid="B23-viruses-04-02650">23</xref>], illustrating the importance of viral variation. </p>
      <p>The genetic variation in viral isolates can also account for variations in viral persistence. Although well appreciated now for several viruses this was demonstrated using LCMV infection as an experimental model in the early days of experimental virology. Hotchin <italic>et al.</italic> found the passage of virus can affect persistence of LCMV infection [<xref ref-type="bibr" rid="B14-viruses-04-02650">14</xref>] which was related to the immune response. After 10 passages, virus titers from the liver were ~20 times higher than titers from brain. Also, newborn mice infected with viral isolates passed from liver were more likely to die than the strains passed from brain. In 1984, Ahmed <italic>et al.</italic> studied the functional consequence of LCMV isolates by observing the virological outcome after infecting mice with virus isolated from different organs (e.g., brain and spleen). These results showed that LCMV which originates from brain continues to have a central nervous system (CNS) tropism, results in a brisk and fulminant cytotoxic T lymphocyte (CTL) response and is subsequently cleared rapidly by the host. In striking contrast, viruses isolated from spleen are tropic for visceral organs, potentiate less vigorous CTL responses and ultimately can exist in recipient mice indefinitely. One of the best characterized examples of this is the variant known as “Clone 13”. LCMV Clone 13 was a variant of the parent Armstrong virus which was isolated from the spleen of carrier mice which sustained a persistent LCMV infection since birth. Clone 13 was one of many splenic clones which could suppress LCMV-specific CTL responses [<xref ref-type="bibr" rid="B24-viruses-04-02650">24</xref>]. Infection with Clone 13 significantly alters the tissue distribution of virus as well as the immunodominance hierarchy of LCMV-specific CD8 T cells compared to Armstrong [<xref ref-type="bibr" rid="B25-viruses-04-02650">25</xref>]. Clone 13 was chosen for further characterization as its profound biological phenotype of persistence (in contrast to the neurotropic and acutely cleared LCMV Armstrong) occurred, despite it having the least amount of genetic variation among many clones isolated with similar biological activity.</p>
      <p>With the development of modern sequencing techniques, investigators sequenced and uncovered that the Clone 13 and Armstrong virus genomes differed by only 5 out of 10,600 nucleotides [<xref ref-type="bibr" rid="B26-viruses-04-02650">26</xref>]. Subsequently, Matloubian <italic>et al.</italic> demonstrated that only two amino acid differences between Armstrong and Clone 13 were critical—a K→Q substitution at position 1079 and F→L substitution at position 260. These two differences in the viral “polymerase” and “glycoprotein” genes, respectively, accounted for the biological phenotype of acute <italic>versus</italic> persistent infection. It also correlated with several other biomarkers such as the virus yield per macrophage and number of macrophage being infected [<xref ref-type="bibr" rid="B27-viruses-04-02650">27</xref>]. This concept that single amino acid changes in a pathogen can dramatically alter the <italic>in vivo</italic> persistence of a virus was first clarified using LCMV. This principle has been extended by studies in other related fields such as HIV [<xref ref-type="bibr" rid="B23-viruses-04-02650">23</xref>], hepatitis E virus [<xref ref-type="bibr" rid="B28-viruses-04-02650">28</xref>] and potentially autoimmunity [<xref ref-type="bibr" rid="B29-viruses-04-02650">29</xref>].</p>
    </sec>
    <sec>
      <title>3. Adaptive Immunity: Understanding the T Cell Mediated Immune Response Using LCMV</title>
      <p>In this section, we review T cell mediated immune responses in 3 parts: T cell recognition of its target via MHC restriction, leading to perforin mediated killing of this target and finally durable memory as a result of this process.</p>
      <p>One of the fundamental tenets of the adaptive immune response, MHC restriction, came about from the Nobel Prize winning studies performed by Zinkernagel and Doherty with LCMV. Prior to this, the MHC locus was studied exclusively in transplantation and tumor rejection. Zinkernagel and Doherty did several experiments to address how the MHC genetic locus contributed to the CTL response against LCMV infected cells [<xref ref-type="bibr" rid="B30-viruses-04-02650">30</xref>,<xref ref-type="bibr" rid="B31-viruses-04-02650">31</xref>,<xref ref-type="bibr" rid="B32-viruses-04-02650">32</xref>]. These studies demonstrated the now appreciated as more conventional and ubiquitous role for cytotoxic T lymphocytes to kill their MHC restricted targets. Specifically, this work demonstrated that the cellular immune system simultaneously recognizes both the foreign peptide as well as the major histocompatibility antigens. This made clear the role of the MHC in the normal immune response. Their key experiment was as follows: LCMV specific CTL from infected strain A were mixed with cells from 2 different mouse strains, A and B. They observed that CTL killed only cellular targets from the LCMV infected strain A. The CTL did not lyse uninfected cells from either strain A or B nor infected cells from strain B (<xref ref-type="fig" rid="viruses-04-02650-f002">Figure 2</xref>). They concluded that CTL can only recognize foreign antigen in the context of the originating MHC to trigger lysis of the MHC matched target. Subsequently, Zinkernagel and Doherty went on to demonstrate that this restriction of CTL was dependent on the specific MHC environment in the thymus from which they originated [<xref ref-type="bibr" rid="B33-viruses-04-02650">33</xref>]. </p>
      <fig id="viruses-04-02650-f002" position="anchor">
        <label>Figure 2</label>
        <caption>
          <p>The Discovery of Major Histocompatibility Complex (MHC) restriction. These experiments were completed and published in 1974. Rolf Zinkernagel and Peter Doherty harvested splenocytes containing viral specific cytotoxic T lymphocytes (CTL) from infected mouse strain A. These CTL were then mixed <italic>in vitro</italic> with either C3H mouse fibroblasts or macrophages derived from different strains, infected with LCMV or uninfected, and labeled with Chromium-51 (Cr-51). CTL killing of target cells was assessed by release of Cr-51. These experiments demonstrated that LCMV specific CTL are “MHC restricted” and thus only lyse cells carrying the same MHC as the strain generated from those CTL [<xref ref-type="bibr" rid="B30-viruses-04-02650">30</xref>]. </p>
        </caption>
        <graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="viruses-04-02650-g002.tif"/>
      </fig>
      <p>These studies were confirmed and extended by other groups. That is, it was subsequently observed that this CTL response was critical to clear an LCMV infection [<xref ref-type="bibr" rid="B34-viruses-04-02650">34</xref>] and that consistent with this idea, the transfer of cloned CTL was sufficient to rapidly clear an otherwise persistent LCMV infection [<xref ref-type="bibr" rid="B35-viruses-04-02650">35</xref>]. </p>
      <p>These experiments demonstrated a critical missing link in the field of immunology—how a T cell is able to recognize its target under conventional physiologic conditions. This has vast implications throughout immunology and medicine including infectious diseases, tumor immunotherapy and autoimmunity. In order to understand how infections are cleared and augment this process, eliminate tumors with T cells or to understand allergies and autoimmunity, the fundamental rules governing T cell recognition of its target provides a necessary foundation for our understanding and thus approach to this day. Specifically, since these landmark findings and to date, investigators have observed that the human leukocyte antigen (HLA) locus in human (MHC in mice) is the most highly associated genetic locus with human disease. Current genome wide association studies (GWAS) reinforce this biological fact that time and time again, the HLA locus is the most critical determinant towards susceptibility <italic>versus</italic> resistance to autoimmune or infectious diseases. This is largely attributed to the critical function of the HLA to educate and direct T cell activity—notably uncovered by infecting mice with LCMV and determining that the T cell response was restricted by the MHC.</p>
      <p>In addition to the discovery of MHC restriction, the study of LCMV also contributed to the understanding of T cell mediated cell lysis, in particular perforin based cytotoxicity [<xref ref-type="bibr" rid="B36-viruses-04-02650">36</xref>]. Kagi <italic>et al.</italic> generated perforin deficient mice and found that T cell mediated cytotoxicity to LCMV-WE infected cells were largely absent in these mice [<xref ref-type="bibr" rid="B37-viruses-04-02650">37</xref>]. Additionally, these mice were not able to eliminate MHC class I positive MC57G fibrosarcoma tumor cells, indicating that functional CTLs and Natural Killer (NK) cells were not present in these perforin deficient mice.</p>
      <p>A key feature of the adaptive immune response is memory. Studies with LCMV played a key role in understanding this process. T cells “remember” their cognate antigen after initial antigen encounter. After a period of complete absence of antigen, subsequent antigen encounters are noted by a more rapid and potent response. Although now widely accepted, formal proof of this concept was acquired in part by extensive studies in the LCMV model system. LCMV was and continues to be an ideal model to study immunological memory for three primary reasons: (1) LCMV Armstrong is a natural acute infection in mice, <italic>i.e.</italic>, the virus is completely eliminated by its host in a very short period of time after infection, ~1 week. (2) Critical reagents such as T-cell receptor (TCR) transgenic mice for both CD4 and CD8 T cells are readily available. Additionally the cognate MHC tetramers to detect these T cells via conventional flow cytometry were obtained early on for the LCMV model system. These reagents allow the investigator to easily enumerate endogenous viral antigen specific T cell responses [<xref ref-type="bibr" rid="B38-viruses-04-02650">38</xref>]. (3) The T cell response to LCMV is very robust. As this response is relatively large and focused, it allows the investigator to more easily assess T cell responses accurately. Findings gained from experimental LCMV research have been validated in a pioneering study that followed yellow fever and small pox-specific T cell responses in humans [<xref ref-type="bibr" rid="B39-viruses-04-02650">39</xref>]. These important features have allowed several labs to make significant contributions towards our understanding of T cell memory. A thorough discussion of these findings is beyond the scope of this review. Therefore, we will focus on specific key contributions to CD8 T cell memory. Maintenance of memory in the absence of antigen is a critical feature of memory [<xref ref-type="bibr" rid="B40-viruses-04-02650">40</xref>,<xref ref-type="bibr" rid="B41-viruses-04-02650">41</xref>]. In the study by Lau <italic>et al</italic>., the investigators adoptively transferred LCMV immune CD8 T cells into uninfected recipient mice and then performed a second transfer 18 months after the original transfer. They then used many sensitive immunological, viral and molecular assays to show that LCMV was absent from the purified CD8 T cells. At this point, the investigators quantitated durable antigen specific memory responses over time and showed that this memory (after 26 months, greater than the average mouse lifespan) was still protective against a virulent LCMV challenge. </p>
      <p>Another property of memory is the expansion and maintenance of a memory pool from a smaller naïve precursor population. Characterization of this kinetic expansion of naive CD8 T cells precursors was performed using LCMV Armstrong. Here investigators tracked LCMV antigen specific T cells using tetramerized MHC molecules labeled with a fluorophore. They concluded that there is 1 precursor specific for the LCMV immunodominant H-2Db-restricted GP33-41 epitope for every 2 × 10<sup>5</sup> CD8 T cell in the naïve animal [<xref ref-type="bibr" rid="B42-viruses-04-02650">42</xref>]. Those precursors can divide ~14 times during the first week of infection, resulting in a &gt;16,000 fold expansion. The effector T cell populations, after resolution of infection, underwent 2 different outcomes. Most of the effector T cells were eliminated via apoptosis; the rest of them become memory T cells. The apoptosis of effector T cells is termed the “contraction phase”. The contraction of effector T cells may be via co-regulation of the IL-2 family, TNF-family members, perforin and IFN-γ [<xref ref-type="bibr" rid="B43-viruses-04-02650">43</xref>]. The total number of antigen specific T cells contracted ~10 fold after the peak of expansion [<xref ref-type="bibr" rid="B43-viruses-04-02650">43</xref>]. Subsequent to T cell contraction, CD8 memory T cells form a stable pool, ~10<sup>6</sup> per spleen, whereas CD4 T cell numbers slowly erode (<xref ref-type="fig" rid="viruses-04-02650-f003">Figure 3</xref>). This was determined by following viral antigen-specific T cells over ~3 years using tetramers to the CD8 T cell epitopes (GP33, GP276, GP118, GP92, NP396, NP205) and CD4 T cell epitopes (GP61, NP309). It was observed that the CD8:CD4 ratio increases from 10:1 twenty dpi to 100:1 at 900 dpi [<xref ref-type="bibr" rid="B44-viruses-04-02650">44</xref>].</p>
      <fig id="viruses-04-02650-f003" position="anchor">
        <label>Figure 3</label>
        <caption>
          <p>Schematic of epitope-specific CD4 and CD8 T cell response from acute activation to memory. Data adapted from Homann <italic>et al.</italic> 2001 [<xref ref-type="bibr" rid="B44-viruses-04-02650">44</xref>]. Splenocytes were collected on the day post infection indicated. MHC tetramer staining was performed to enumerate T cells specific to the LCMV GP61 epitope- (CD4 T cell specific; blue line) as well as the LCMV CD8 T cell specific epitopes, GP33 (red line) and NP396 (black line). </p>
        </caption>
        <graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="viruses-04-02650-g003.tif"/>
      </fig>
      <p>Memory T cells can be divided into two subsets, central memory and effector memory [<xref ref-type="bibr" rid="B45-viruses-04-02650">45</xref>]. In 2003 the lineage relationship of those two subsets was described by Ahmed’s group using LCMV and <italic>Listeria monocytogenes</italic>. They observed a conversion from T cell effector memory to the central memory population [<xref ref-type="bibr" rid="B46-viruses-04-02650">46</xref>]. This remains a controversial field. One example is that the repertoires of circulating human CD8 central and effector memory T cell subsets appear to be distinct in contrast to the mouse system [<xref ref-type="bibr" rid="B47-viruses-04-02650">47</xref>].</p>
    </sec>
    <sec>
      <title>4. Understanding Innate Immunity: Contributions from the LCMV System</title>
      <p>LCMV also contributed to the understanding of the innate immune system, the first barrier of the body to pathogens. Natural Killer cells, or NK cells, were introduced in 1972 by Evans for its selective tumor killing characteristics [<xref ref-type="bibr" rid="B48-viruses-04-02650">48</xref>]. Welsh <italic>et al.</italic> in 1977 [<xref ref-type="bibr" rid="B49-viruses-04-02650">49</xref>], found that after LCMV infection, early cytotoxic cells (ECC) were generated one day post infection in spleen and peritoneum. These ECC emerge and kill both infected and uninfected cell lines and their peak activity appears at three day post infection [<xref ref-type="bibr" rid="B50-viruses-04-02650">50</xref>]. On the other hand, the adaptive immune response began around five days post infection. Ray Welsh’s lab continues to follow the role of NK cells during LCMV infection. Their most recent studies have implicated NK cells as master regulators of CD4 T cells which subsequently control CD8 T cells during viral infections [<xref ref-type="bibr" rid="B51-viruses-04-02650">51</xref>]. These findings provide further evidence for the importance of NK cells as innate effectors and an essential bridge in directing an appropriate adaptive immune response.</p>
      <p>The study of LCMV also contributed to our knowledge of natural antibodies. Natural antibodies were considered “background antibody” since they constitute only ~2%–10% of the total serum in naive mice and had no clear biological role. The functional role of natural antibody was and still is poorly understood. However, one potential role of natural antibodies demonstrated by the Zinkernagel lab was in the LCMV antiviral response [<xref ref-type="bibr" rid="B52-viruses-04-02650">52</xref>]. This study showed that natural antibody acts to “redistribute” viral antigen. Specifically, virus in the circulation is bound to natural antibody which enhances virus uptake by the secondary lymphoid organs. Since secondary lymphoid organs are widely accepted as the crucible to initiate cellular immunity [<xref ref-type="bibr" rid="B53-viruses-04-02650">53</xref>], this is likely to be advantageous to protect the host from pathogen challenge. In contrast, in the absence of natural antibody, virus was found in end organs such as liver and brain which may then suffer directly from viral infection or their sequelae. </p>
    </sec>
    <sec>
      <title>5. Immune Dysfunction as Observed Using the LCMV Model — Immunosuppression, Immune Exhaustion, Immunopathology, Autoimmunity and Heterologous Immunity</title>
      <p>Like other complex systems, the immune system is susceptible to abnormal or impaired functioning. The immune system has almost certainly evolved to protect us from morbidity and mortality dealt by infectious microorganisms. However, it is now well appreciated that this system can be incorrectly silenced, falsely activated and/or wrongly directed. The concept and experimental evidence for immune dysfunction originated in part from studies with LCMV. Conceptually, these findings were key to better understanding the range of disease which may emanate from a system which evolved to protect the host as well as better understanding methods to modulate an immune response therapeutically. </p>
      <p>Immunosuppression is one example of immune dysfunction. It was appreciated early on that measles can cause immunosuppression [<xref ref-type="bibr" rid="B54-viruses-04-02650">54</xref>] which is likely due to virus modulation of dendritic cell function and development [<xref ref-type="bibr" rid="B54-viruses-04-02650">54</xref>]. Similarly, it was later shown that LCMV is capable of initiating immunosuppression [<xref ref-type="bibr" rid="B55-viruses-04-02650">55</xref>]. The LCMV system provided several unique features beyond what was observed prior. In contrast to lytic viruses which directly infect lymphocytes to induce immunosuppression, LCMV is a non-lytic virus and primarily infects non-lymphocytic cells. Despite this, LCMV infected animals were unable to generate a robust cytotoxic T lymphocyte (CTL) response [<xref ref-type="bibr" rid="B56-viruses-04-02650">56</xref>]. Concomitant with these studies was the finding that LCMV clones which persistently infected animals resulted in immunosuppression (including decreased CTL activity and thymocyte number whereas those viral clones which were acutely cleared did not [<xref ref-type="bibr" rid="B24-viruses-04-02650">24</xref>,<xref ref-type="bibr" rid="B57-viruses-04-02650">57</xref>]). These studies serve as a basis for understanding how individuals become immunosuppressed during viral infection. Moreover, one can harness these mechanisms to therapeutically suppress the immune response. </p>
      <p>A second aspect of immune dysfunction is the phenomenon of “immune exhaustion” which may also be considered a subtype of virus induced immune suppression. Capitalizing on isolates of persistent (<italic>versus</italic> acute) LCMV which had been previously defined, the mechanism of persistent infection has been studied extensively using Clone 13 and Docile LCMV variants. In 1993, Moskophidis <italic>et al.</italic> introduced the concept of “exhaustion” of effector T cells during a persistent LCMV infection, in which they coined the term. They found a defect in both antigen specific T cell function and number which correlated with a viremia of 10<sup>4</sup> PFU/mL or higher [<xref ref-type="bibr" rid="B58-viruses-04-02650">58</xref>]. Exhausted virus‑specific CD8 T cells, despite being highly activated, also demonstrate upregulated inhibitory signals which diminish their effector functions [<xref ref-type="bibr" rid="B59-viruses-04-02650">59</xref>,<xref ref-type="bibr" rid="B60-viruses-04-02650">60</xref>]. This exhaustion or loss of T cell function is thought to be caused by continuous high level stimulation of T cells. Consistent with this idea, Mueller and Ahmed observed that decreasing MHC Class I stimulation of CD8 T cells (with an MHC I −/− environment using bone marrow chimeric mice) resulted in increased numbers of polyfunctional T cells during a persistent LCMV Clone 13 infection [<xref ref-type="bibr" rid="B61-viruses-04-02650">61</xref>] (polyfunctionality referring to the extensive production of multiple cytokines by an individual T Cell, a paradigm established in part by LCMV). This phenomenon of immune exhaustion is generalizable and observed with other infections such as HIV, Hepatitis B and Hepatitis C [<xref ref-type="bibr" rid="B62-viruses-04-02650">62</xref>,<xref ref-type="bibr" rid="B63-viruses-04-02650">63</xref>,<xref ref-type="bibr" rid="B64-viruses-04-02650">64</xref>]. Interestingly, with further investigations into the mechanism of T cell exhaustion by multiple inhibitory pathways, we now appreciate a more complex set of cues to resurrect T cell function (e.g., by blocking the PD-1, IL-10, TGF-beta and LAG-3 pathways in addition to augmenting IL-7 signaling [<xref ref-type="bibr" rid="B65-viruses-04-02650">65</xref>,<xref ref-type="bibr" rid="B66-viruses-04-02650">66</xref>,<xref ref-type="bibr" rid="B67-viruses-04-02650">67</xref>,<xref ref-type="bibr" rid="B68-viruses-04-02650">68</xref>,<xref ref-type="bibr" rid="B69-viruses-04-02650">69</xref>,<xref ref-type="bibr" rid="B70-viruses-04-02650">70</xref>,<xref ref-type="bibr" rid="B71-viruses-04-02650">71</xref>]).</p>
      <p>A third form of immune dysfunction is immunopathology in which disease is associated with or directly caused by the immune system and not as a direct result of the pathogen burden or toxicity from the infected cell. Immunopathology is now appreciated to happen fairly often and largely in the context of infection. Therefore by suppressing the immune response, one can then eliminate the clinical disease, even when the viral infection is not treated. An early example in the LCMV literature was the development of LCMV meningitis which was not due to direct viral infection of the central nervous system (CNS) but collateral CTL dependent damage [<xref ref-type="bibr" rid="B72-viruses-04-02650">72</xref>]. Consistent with this idea, observations from Nathanson’s group reported during the same year, found that in the immunosuppressed mouse no CNS disease was observed [<xref ref-type="bibr" rid="B55-viruses-04-02650">55</xref>,<xref ref-type="bibr" rid="B56-viruses-04-02650">56</xref>,<xref ref-type="bibr" rid="B73-viruses-04-02650">73</xref>,<xref ref-type="bibr" rid="B74-viruses-04-02650">74</xref>]. These results provided a dramatic example of how the immune response and not direct infection of virus was responsible for clinical disease. Recently, this CTL-dependent immunopathology has been demonstrated to be secondary to a myelomonocytic cell recruitment. Specifically, investigators used multiphoton microscopy and antibody depletion to show that macrophages and neutrophils are the key effector cells, (directed by CTL) causing fatal CNS vascular injury during acute LCMV meningitis [<xref ref-type="bibr" rid="B75-viruses-04-02650">75</xref>]</p>
      <p>LCMV also contributed to the understanding of interferon in immunopathology. Interferon is a protein well known to virologists as the premier anti-viral cytokine. Much of this work is secondary to the development of a neutralizing anti-sera produced in sheep. Using this reagent, investigators demonstrated the essential anti-viral role of interferon <italic>in vivo</italic> [<xref ref-type="bibr" rid="B76-viruses-04-02650">76</xref>,<xref ref-type="bibr" rid="B77-viruses-04-02650">77</xref>]. However, as earlier as 1975 these investigators also demonstrated that interferon may have a detrimental effect. Mice injected with interferon daily after birth underwent liver degeneration, glomerulonephritis and death [<xref ref-type="bibr" rid="B78-viruses-04-02650">78</xref>,<xref ref-type="bibr" rid="B79-viruses-04-02650">79</xref>]. Using this sheep anti-sera to deplete interferon, the deleterious effects of LCMV in the congenitally infected mouse model were also shown to be interferon dependent [<xref ref-type="bibr" rid="B80-viruses-04-02650">80</xref>]. Consistent with the central idea of immunopathology, Riviere <italic>et al.</italic> found that depletion of interferon in LCMV infected mice inhibited weight loss, liver cell necrosis and death, despite an ~100 fold increase in viremia [<xref ref-type="bibr" rid="B80-viruses-04-02650">80</xref>].</p>
      <p>Another form of immune dysfunction is autoimmunity. In an early example of immune reactivity to self, Pfizenmaier <italic>et al.</italic> found that LCMV stimulated lymphocytes attacked both infected target cells and noninfected syngeneic target cells between 4 and 6 days post infection. As the infection progressed, the immune response was recognized to be more specific to LCMV infected cells [<xref ref-type="bibr" rid="B81-viruses-04-02650">81</xref>,<xref ref-type="bibr" rid="B82-viruses-04-02650">82</xref>]. This early self-reactive immune response was considered autoimmunity, <italic>i.e.</italic>, a dysfunction in self <italic>versus</italic> non-self discrimination. In a focused effort to establish models of virus induced autoimmunity, two groups independently setup models of LCMV induced diabetes by expressing the LCMV glycoprotein (GP) under the control of the rat insulin promoter. This directed expression of LCMV GP as a “self” antigen in the beta islet cells of the pancreas [<xref ref-type="bibr" rid="B83-viruses-04-02650">83</xref>,<xref ref-type="bibr" rid="B84-viruses-04-02650">84</xref>]. In this way, these groups established small animal models in which autoimmunity could be triggered by viral infection. Upon infection, “self-reactivity” would occur and testable hypotheses regarding the mechanism of viral induced autoimmunity could be more easily addressed. A similar model in the CNS was later established whereby viral antigen was transgenically expressed in oligodendrocytes resulting in CNS disease only after viral infection [<xref ref-type="bibr" rid="B85-viruses-04-02650">85</xref>]. These models have allowed investigators to assess the concept of “molecular mimicry” as a potential source of autoimmunity triggered by infection. Given the potential amino acid sequence similarities between host and pathogen, molecular mimicry may be the basis for T or B cell cross-reactivity between host and pathogen. </p>
      <p>One final potential source of immune dysfunction is from heterologous immunity. At its most basic, heterologous immunity stems from the observation that infection by one pathogen may protect an individual from a phylogenetically distinct invader. In some ways similar to “molecular mimicry” the mechanism of heterologous immunity is thought to be from a cross-reactive lymphocytic response. LCMV infection affords subsequent protection towards vaccinia virus [<xref ref-type="bibr" rid="B86-viruses-04-02650">86</xref>] by increased CTL responses toward vaccinia virus infection quantitated by IFNγ production [<xref ref-type="bibr" rid="B87-viruses-04-02650">87</xref>]. Another variation of this is observed when infection with either the arenavirus Pichinde virus or vaccinia virus activated the CTL response specific to LCMV (<xref ref-type="fig" rid="viruses-04-02650-f004">Figure 4</xref>) [<xref ref-type="bibr" rid="B88-viruses-04-02650">88</xref>]. These findings are reviewed in greater depth elsewhere [<xref ref-type="bibr" rid="B89-viruses-04-02650">89</xref>]. Although recognized as a potential for increased immune protection, heterologous immune responses can also be devastating for the host. A dramatic and clinically important example is the potentially lethal outcome when individuals are sequentially infected with different serotypes of dengue virus. The pathogenesis of dengue hemorrhagic fever may involve the amplification of inferior but cross-reactive T cell clones. In the complex real-world situation of multiple pathogen encounters, altering the hierarchy of epitope-specific T cell clones results in largely unpredictable outcomes. The use of model systems with well characterized viruses such as LCMV is key for determining incremental understanding to piece together this complex puzzle. </p>
      <fig id="viruses-04-02650-f004" position="anchor">
        <label>Figure 4</label>
        <caption>
          <p>Heterologous immunity. This figure shows the relationship of heterologous immunity between LCMV and other viruses. These experiments were performed using C57BL/6 mice. The black filled arrows indicate a protective effect between the first infection (base of arrow) and the challenge infection (head of arrow). In some cases this protection from heterologous immunity is bi-directional as shown. On the contrary, the unfilled arrow depicts an enhancement of disease when infection of influenza A precedes LCMV infection.</p>
        </caption>
        <graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="viruses-04-02650-g004.tif"/>
      </fig>
    </sec>
    <sec>
      <title>6. From the Present and Onwards</title>
      <p>As an established model system, LCMV will continue to contribute to the field of viral immunology. We envision these contributions to fall in two major categories—the study of persistent viral infections and vaccine development.</p>
      <p>Regarding the study of persistent viral infection, LCMV is noteworthy as the best characterized platform to study acute <italic>versus</italic> persistent viral infection side by side in its natural host Mus musculus which is also the premier genetic system for mammalian genetics. This is largely because of the profound phenotypic difference between LCMV Armstrong and its variant Clone 13 which results from only a two nucleotide difference. This genetic conservation allows the investigator to have great focus in being able to assign function without being lost in the complexity of most viral genotype to phenotype searches. Having said that, it is still unclear exactly how either of these mutations confer persistence. We know that both mutations are needed. The glycoprotein mutation affects tropism and the polymerase affects replicative capacity [<xref ref-type="bibr" rid="B90-viruses-04-02650">90</xref>,<xref ref-type="bibr" rid="B91-viruses-04-02650">91</xref>]. How these mutations and their altered function mechanistically confer their observed activity is unknown. Moreover how this activity translates into such a profound difference physiologically (acute <italic>versus</italic> persistent infection) is actively being studied but not completely understood. We suspect that these advances will continue to be useful in understanding some of the shared patterns between all persistent viral infections. Towards this point, the genetic similarities of these two viral variants has left the immunodominant epitopes untouched and resulted in numerous studies characterizing acute <italic>versus</italic> persist viral infections side by side and with a minimum of confounding factors. </p>
      <p>We foresee these studies providing the field with great insight towards the ever increasing burden of persistent viral infection in our modern society. Importantly, cancer in many ways mimics persistent viral infection as a parasitic entity which evades and progresses in spite of the body’s attempts to eliminate it. Thus studies with LCMV will likely help us better understand cancer as well. Consonant with this is one of the great modern successes in LCMV studies—that interrupting the PD-1 pathway can resurrect an otherwise exhausted immune response. This concept of uncoupling the immune response from negative signaling pathways has been applied successfully to the treatment of numerous tumors using monoclonal antibodies to both PD-1 and PD-L1 in humans (published during the writing of this review [<xref ref-type="bibr" rid="B92-viruses-04-02650">92</xref>,<xref ref-type="bibr" rid="B93-viruses-04-02650">93</xref>]. PD-1 antibody treatment has also been used to enhance SIV-specific immunity <italic>in vivo</italic>, in macaques and to reverse immune dysfunction of HIV-specific T cells <italic>in vitro</italic> from infected donor samples [<xref ref-type="bibr" rid="B94-viruses-04-02650">94</xref>,<xref ref-type="bibr" rid="B95-viruses-04-02650">95</xref>]. Because of the large and focused immune response to LCMV, it has been a strong model system for T cell memory and the related field of vaccinology. Indeed, many of the fundamental rules of memory were originally investigated with the CD8 T cell response towards LCMV. This work is now being applied to a refined mechanistic understanding of CD4 T cell memory [<xref ref-type="bibr" rid="B96-viruses-04-02650">96</xref>]. Because of its intense use as a platform for CD8 T cell memory, LCMV was recently used to quantitate the efficacy of a novel hydrogen peroxide-based vaccine platform [<xref ref-type="bibr" rid="B97-viruses-04-02650">97</xref>]. Interestingly, LCMV is itself being used as a vector platform for vaccination [<xref ref-type="bibr" rid="B98-viruses-04-02650">98</xref>,<xref ref-type="bibr" rid="B99-viruses-04-02650">99</xref>]. Therefore, we anticipate that from many different approaches, the LCMV system will be a key player in our future refinement of vaccinology. This is critical as vaccines are widely considered to be the most efficient use of health care funds to alleviate morbidity and mortality worldwide.</p>
      <p>In addition to a primary focus on the above (persistent viral infections and vaccines), we expect that some energy will be focused on the biology of this arenavirus itself. This is largely because of its recognition as a cause of meningitis in the growing immunosuppressed population [<xref ref-type="bibr" rid="B100-viruses-04-02650">100</xref>,<xref ref-type="bibr" rid="B101-viruses-04-02650">101</xref>,<xref ref-type="bibr" rid="B102-viruses-04-02650">102</xref>,<xref ref-type="bibr" rid="B103-viruses-04-02650">103</xref>] and as the prototype of a family of more lethal human hemorrhagic fever viruses. The most discussed of these is Lassa fever (endemic in sub-Saharan Africa). Other strains are endemic in South America (e.g., Junin and Machupo viruses). And new strains causing significant morbidity and mortality continue to be recognized (e.g., Lujo in southern Africa). Importantly, as our world continues to become more interconnected, these lethal viral infections will likely enter further regions of the globe. For these reasons, the United States National Institute for Allergy and Infectious Diseases (NIAID) has deemed much of the arenaviridae to be “Category A Priority Pathogens”. This is the highest level of importance for the high potential for morbidity and mortality from an infectious agent which is relatively easy to produce and transmit. Indeed, with the advent of reverse genetic techniques for arenaviruses pioneered by the de la Torre group [<xref ref-type="bibr" rid="B104-viruses-04-02650">104</xref>,<xref ref-type="bibr" rid="B105-viruses-04-02650">105</xref>,<xref ref-type="bibr" rid="B106-viruses-04-02650">106</xref>,<xref ref-type="bibr" rid="B107-viruses-04-02650">107</xref>,<xref ref-type="bibr" rid="B108-viruses-04-02650">108</xref>,<xref ref-type="bibr" rid="B109-viruses-04-02650">109</xref>,<xref ref-type="bibr" rid="B110-viruses-04-02650">110</xref>] the production of designer arenaviruses is now almost routine.</p>
      <p>Although we are familiar with the disclaimer “past performance is not a guarantee of future results”, we suspect that future studies with LCMV will be even more productive than its illustrious past. As biomedical research continues to become more complex, the rich infrastructure of the LCMV model system will be key. It provides not only reductionist approaches but also enough plasticity to clarify a wide variety of questions in viral immunology and beyond. We believe the multitude of reagents and large body of experimental findings will provide experimental anchors and handles to guide future investigators along the ever increasingly complex road of biomedical research.</p>
    </sec>
   
  </body>
  <back>
   <notes>
      <title>Conflict of Interest</title>
      <p>The authors declare no conflict of interest.</p>
    </notes>
    <ack>
      <title>Acknowledgements</title>
      <p>The authors thank all current and past colleagues in the field who have contributed to the work included here. Whilst we have sought to draw upon a broad range of publications, we apologize to any colleagues whose work may not have been cited due to space constraints or the specific focus of this review. This work was supported in part by National Institutes of Health Grants AI091641 &amp; P30AR039750. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</p>
    </ack>
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